
PMC:1920263 / 10494-11164
Annnotations
test2
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3861 | 161-164 | Protein | denotes | A3G |
GO-CC
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4115 | 88-93 | http://purl.obolibrary.org/obo/GO_0005623 | denotes | cells |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3868 | 130-145 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcriptional |
T3869 | 358-367 | http://purl.obolibrary.org/obo/GO_0009058 | denotes | synthesis |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3983 | 0-1 | CD | denotes | 5 |
T3984 | 1-2 | SYM | denotes | ′ |
T3985 | 2-3 | : | denotes | - |
T3986 | 3-8 | NNP | denotes | Rapid |
T3987 | 9-22 | NN | denotes | amplification |
T3988 | 23-25 | IN | denotes | of |
T3989 | 26-30 | NNP | denotes | cDNA |
T3990 | 31-35 | VBZ | denotes | ends |
T3991 | 36-44 | NN | denotes | analysis |
T3992 | 45-46 | -LRB- | denotes | ( |
T3993 | 46-50 | NNP | denotes | RACE |
T3994 | 50-51 | -RRB- | denotes | ) |
T3995 | 52-57 | JJ | denotes | Total |
T3996 | 58-61 | NNP | denotes | RNA |
T3997 | 62-65 | VBD | denotes | was |
T3998 | 66-74 | VBN | denotes | isolated |
T3999 | 75-79 | IN | denotes | from |
T4000 | 80-82 | CD | denotes | A3 |
T4001 | 82-85 | CD | denotes | .01 |
T4002 | 86-87 | NNP | denotes | T |
T4003 | 88-93 | NNS | denotes | cells |
T4004 | 94-99 | VBG | denotes | using |
T4005 | 100-106 | NNP | denotes | RNeasy |
T4006 | 107-111 | NNP | denotes | mini |
T4007 | 112-115 | NN | denotes | kit |
T4008 | 116-117 | -LRB- | denotes | ( |
T4009 | 117-123 | NNP | denotes | Qiagen |
T4010 | 123-124 | -RRB- | denotes | ) |
T4011 | 124-125 | . | denotes | . |
T4012 | 126-129 | DT | denotes | The |
T4013 | 130-145 | JJ | denotes | transcriptional |
T4014 | 146-151 | NN | denotes | start |
T4015 | 152-157 | NNS | denotes | sites |
T4016 | 158-160 | IN | denotes | of |
T4017 | 161-164 | NNP | denotes | A3G |
T4018 | 165-169 | VBD | denotes | were |
T4019 | 170-180 | VBN | denotes | identified |
T4020 | 181-186 | VBG | denotes | using |
T4021 | 187-190 | DT | denotes | the |
T4022 | 191-192 | CD | denotes | 5 |
T4023 | 192-193 | NN | denotes | ′ |
T4024 | 193-194 | NN | denotes | / |
T4025 | 194-195 | CD | denotes | 3 |
T4026 | 195-196 | NN | denotes | ′ |
T4027 | 197-201 | NNP | denotes | RACE |
T4028 | 202-205 | NNP | denotes | Kit |
T4029 | 205-206 | , | denotes | , |
T4030 | 207-210 | CD | denotes | 2nd |
T4031 | 211-221 | NNP | denotes | Generation |
T4032 | 222-223 | -LRB- | denotes | ( |
T4033 | 223-228 | NNP | denotes | Roche |
T4034 | 228-229 | -RRB- | denotes | ) |
T4035 | 230-239 | VBG | denotes | according |
T4036 | 240-242 | TO | denotes | to |
T4037 | 243-246 | DT | denotes | the |
T4038 | 247-259 | NN | denotes | manufacturer |
T4039 | 259-261 | POS | denotes | 's |
T4040 | 262-274 | NNS | denotes | instructions |
T4041 | 274-275 | . | denotes | . |
T4042 | 276-279 | DT | denotes | The |
T4043 | 280-289 | VBG | denotes | following |
T4044 | 290-297 | NNS | denotes | primers |
T4045 | 298-302 | VBD | denotes | were |
T4046 | 303-307 | VBN | denotes | used |
T4047 | 307-308 | : | denotes | : |
T4048 | 309-320 | NN | denotes | RACE-APO3G1 |
T4049 | 321-322 | -LRB- | denotes | ( |
T4050 | 322-323 | CD | denotes | 5 |
T4051 | 323-324 | SYM | denotes | ′ |
T4052 | 324-325 | : | denotes | - |
T4053 | 325-346 | NN | denotes | TATCCCTTGTACACTTTGT-3 |
T4054 | 346-347 | NN | denotes | ′ |
T4055 | 347-348 | -RRB- | denotes | ) |
T4056 | 349-352 | IN | denotes | for |
T4057 | 353-357 | NNP | denotes | cDNA |
T4058 | 358-367 | NN | denotes | synthesis |
T4059 | 367-368 | , | denotes | , |
T4060 | 369-380 | NN | denotes | RACE-APO3G2 |
T4061 | 381-382 | -LRB- | denotes | ( |
T4062 | 382-383 | CD | denotes | 5 |
T4063 | 383-384 | SYM | denotes | ′ |
T4064 | 384-385 | : | denotes | - |
T4065 | 385-405 | NN | denotes | CATACTCCTGGTCACGAT-3 |
T4066 | 405-406 | NN | denotes | ′ |
T4067 | 406-407 | -RRB- | denotes | ) |
T4068 | 408-411 | IN | denotes | for |
T4069 | 412-415 | DT | denotes | the |
T4070 | 416-421 | JJ | denotes | first |
T4071 | 422-425 | NNP | denotes | PCR |
T4072 | 426-429 | CC | denotes | and |
T4073 | 430-444 | NNP | denotes | RACE-APO3Gnest |
T4074 | 445-446 | -LRB- | denotes | ( |
T4075 | 446-447 | CD | denotes | 5 |
T4076 | 447-448 | SYM | denotes | ′ |
T4077 | 448-449 | : | denotes | - |
T4078 | 449-470 | NN | denotes | GAATACACCTGGCCTCGAA-3 |
T4079 | 470-471 | NN | denotes | ′ |
T4080 | 471-472 | -RRB- | denotes | ) |
T4081 | 473-476 | IN | denotes | for |
T4082 | 477-480 | DT | denotes | the |
T4083 | 481-487 | JJ | denotes | nested |
T4084 | 488-491 | NNP | denotes | PCR |
T4085 | 491-492 | . | denotes | . |
T4086 | 493-501 | NN | denotes | Reaction |
T4087 | 502-510 | NNS | denotes | products |
T4088 | 511-515 | VBD | denotes | were |
T4089 | 516-524 | VBN | denotes | analyzed |
T4090 | 525-527 | IN | denotes | by |
T4091 | 528-535 | JJ | denotes | agarose |
T4092 | 536-539 | NN | denotes | gel |
T4093 | 540-555 | NN | denotes | electrophoresis |
T4094 | 555-556 | , | denotes | , |
T4095 | 557-565 | VBN | denotes | purified |
T4096 | 566-571 | VBG | denotes | using |
T4097 | 572-580 | NNP | denotes | QIAquick |
T4098 | 581-584 | NN | denotes | gel |
T4099 | 585-595 | NN | denotes | extraction |
T4100 | 596-599 | NN | denotes | kit |
T4101 | 600-601 | -LRB- | denotes | ( |
T4102 | 601-607 | NNP | denotes | Qiagen |
T4103 | 607-608 | -RRB- | denotes | ) |
T4104 | 608-609 | , | denotes | , |
T4105 | 610-620 | JJ | denotes | T/A-cloned |
T4106 | 621-625 | IN | denotes | into |
T4107 | 626-632 | NN | denotes | vector |
T4108 | 633-642 | NN | denotes | pCR4-TOPO |
T4109 | 643-644 | -LRB- | denotes | ( |
T4110 | 644-654 | NNP | denotes | Invitrogen |
T4111 | 654-655 | -RRB- | denotes | ) |
T4112 | 656-659 | CC | denotes | and |
T4113 | 660-669 | VBD | denotes | sequenced |
T4114 | 669-670 | . | denotes | . |
R3254 | T3983 | T3987 | nummod | 5,amplification |
R3255 | T3984 | T3986 | punct | ′,Rapid |
R3256 | T3985 | T3986 | punct | -,Rapid |
R3257 | T3986 | T3987 | compound | Rapid,amplification |
R3258 | T3987 | T3990 | nsubj | amplification,ends |
R3259 | T3988 | T3987 | prep | of,amplification |
R3260 | T3989 | T3988 | pobj | cDNA,of |
R3261 | T3990 | T3990 | ROOT | ends,ends |
R3262 | T3991 | T3990 | dobj | analysis,ends |
R3263 | T3992 | T3991 | punct | (,analysis |
R3264 | T3993 | T3991 | appos | RACE,analysis |
R3265 | T3994 | T3991 | punct | ),analysis |
R3266 | T3995 | T3996 | amod | Total,RNA |
R3267 | T3996 | T3998 | nsubjpass | RNA,isolated |
R3268 | T3997 | T3998 | auxpass | was,isolated |
R3269 | T3998 | T3998 | ROOT | isolated,isolated |
R3270 | T3999 | T3998 | prep | from,isolated |
R3271 | T4000 | T4003 | nummod | A3,cells |
R3272 | T4001 | T4003 | nummod | .01,cells |
R3273 | T4002 | T4003 | compound | T,cells |
R3274 | T4003 | T3999 | pobj | cells,from |
R3275 | T4004 | T3998 | advcl | using,isolated |
R3276 | T4005 | T4007 | compound | RNeasy,kit |
R3277 | T4006 | T4007 | compound | mini,kit |
R3278 | T4007 | T4004 | dobj | kit,using |
R3279 | T4008 | T4007 | punct | (,kit |
R3280 | T4009 | T4007 | appos | Qiagen,kit |
R3281 | T4010 | T4007 | punct | ),kit |
R3282 | T4011 | T3998 | punct | .,isolated |
R3283 | T4012 | T4015 | det | The,sites |
R3284 | T4013 | T4014 | nsubj | transcriptional,start |
R3285 | T4014 | T4015 | compound | start,sites |
R3286 | T4015 | T4019 | nsubjpass | sites,identified |
R3287 | T4016 | T4015 | prep | of,sites |
R3288 | T4017 | T4016 | pobj | A3G,of |
R3289 | T4018 | T4019 | auxpass | were,identified |
R3290 | T4019 | T4019 | ROOT | identified,identified |
R3291 | T4020 | T4019 | advcl | using,identified |
R3292 | T4021 | T4028 | det | the,Kit |
R3293 | T4022 | T4023 | nummod | 5,′ |
R3294 | T4023 | T4024 | compound | ′,/ |
R3295 | T4024 | T4028 | nmod | /,Kit |
R3296 | T4025 | T4024 | nummod | 3,/ |
R3297 | T4026 | T4028 | compound | ′,Kit |
R3298 | T4027 | T4028 | compound | RACE,Kit |
R3299 | T4028 | T4020 | dobj | Kit,using |
R3300 | T4029 | T4035 | punct | ",",according |
R3301 | T4030 | T4031 | nummod | 2nd,Generation |
R3302 | T4031 | T4035 | nsubj | Generation,according |
R3303 | T4032 | T4033 | punct | (,Roche |
R3304 | T4033 | T4031 | appos | Roche,Generation |
R3305 | T4034 | T4031 | punct | ),Generation |
R3306 | T4035 | T4019 | prep | according,identified |
R3307 | T4036 | T4035 | prep | to,according |
R3308 | T4037 | T4038 | det | the,manufacturer |
R3309 | T4038 | T4040 | poss | manufacturer,instructions |
R3310 | T4039 | T4038 | case | 's,manufacturer |
R3311 | T4040 | T4036 | pobj | instructions,to |
R3312 | T4041 | T4035 | punct | .,according |
R3313 | T4042 | T4044 | det | The,primers |
R3314 | T4043 | T4044 | amod | following,primers |
R3315 | T4044 | T4046 | nsubjpass | primers,used |
R3316 | T4045 | T4046 | auxpass | were,used |
R3317 | T4046 | T4048 | ccomp | used,RACE-APO3G1 |
R3318 | T4047 | T4048 | punct | :,RACE-APO3G1 |
R3319 | T4048 | T4048 | ROOT | RACE-APO3G1,RACE-APO3G1 |
R3320 | T4049 | T4050 | punct | (,5 |
R3321 | T4050 | T4054 | nummod | 5,′ |
R3322 | T4051 | T4050 | punct | ′,5 |
R3323 | T4052 | T4053 | punct | -,TATCCCTTGTACACTTTGT-3 |
R3324 | T4053 | T4054 | compound | TATCCCTTGTACACTTTGT-3,′ |
R3325 | T4054 | T4048 | appos | ′,RACE-APO3G1 |
R3326 | T4055 | T4048 | punct | ),RACE-APO3G1 |
R3327 | T4056 | T4048 | prep | for,RACE-APO3G1 |
R3328 | T4057 | T4058 | compound | cDNA,synthesis |
R3329 | T4058 | T4056 | pobj | synthesis,for |
R3330 | T4059 | T4048 | punct | ",",RACE-APO3G1 |
R3331 | T4060 | T4048 | appos | RACE-APO3G2,RACE-APO3G1 |
R3332 | T4061 | T4062 | punct | (,5 |
R3333 | T4062 | T4065 | meta | 5,CATACTCCTGGTCACGAT-3 |
R3334 | T4063 | T4062 | punct | ′,5 |
R3335 | T4064 | T4065 | punct | -,CATACTCCTGGTCACGAT-3 |
R3336 | T4065 | T4066 | compound | CATACTCCTGGTCACGAT-3,′ |
R3337 | T4066 | T4060 | appos | ′,RACE-APO3G2 |
R3338 | T4067 | T4060 | punct | ),RACE-APO3G2 |
R3339 | T4068 | T4048 | prep | for,RACE-APO3G1 |
R3340 | T4069 | T4071 | det | the,PCR |
R3341 | T4070 | T4071 | amod | first,PCR |
R3342 | T4071 | T4068 | pobj | PCR,for |
R3343 | T4072 | T4071 | cc | and,PCR |
R3344 | T4073 | T4071 | conj | RACE-APO3Gnest,PCR |
R3345 | T4074 | T4075 | punct | (,5 |
R3346 | T4075 | T4078 | acl | 5,GAATACACCTGGCCTCGAA-3 |
R3347 | T4076 | T4078 | punct | ′,GAATACACCTGGCCTCGAA-3 |
R3348 | T4077 | T4078 | punct | -,GAATACACCTGGCCTCGAA-3 |
R3349 | T4078 | T4079 | compound | GAATACACCTGGCCTCGAA-3,′ |
R3350 | T4079 | T4071 | appos | ′,PCR |
R3351 | T4080 | T4048 | punct | ),RACE-APO3G1 |
R3352 | T4081 | T4048 | prep | for,RACE-APO3G1 |
R3353 | T4082 | T4084 | det | the,PCR |
R3354 | T4083 | T4084 | amod | nested,PCR |
R3355 | T4084 | T4081 | pobj | PCR,for |
R3356 | T4085 | T4048 | punct | .,RACE-APO3G1 |
R3357 | T4086 | T4087 | amod | Reaction,products |
R3358 | T4087 | T4089 | nsubjpass | products,analyzed |
R3359 | T4088 | T4089 | auxpass | were,analyzed |
R3360 | T4089 | T4089 | ROOT | analyzed,analyzed |
R3361 | T4090 | T4089 | agent | by,analyzed |
R3362 | T4091 | T4093 | amod | agarose,electrophoresis |
R3363 | T4092 | T4093 | compound | gel,electrophoresis |
R3364 | T4093 | T4090 | pobj | electrophoresis,by |
R3365 | T4094 | T4093 | punct | ",",electrophoresis |
R3366 | T4095 | T4105 | amod | purified,T/A-cloned |
R3367 | T4096 | T4095 | xcomp | using,purified |
R3368 | T4097 | T4100 | compound | QIAquick,kit |
R3369 | T4098 | T4099 | compound | gel,extraction |
R3370 | T4099 | T4100 | compound | extraction,kit |
R3371 | T4100 | T4096 | dobj | kit,using |
R3372 | T4101 | T4100 | punct | (,kit |
R3373 | T4102 | T4100 | appos | Qiagen,kit |
R3374 | T4103 | T4100 | punct | ),kit |
R3375 | T4104 | T4100 | punct | ",",kit |
R3376 | T4105 | T4093 | amod | T/A-cloned,electrophoresis |
R3377 | T4106 | T4105 | prep | into,T/A-cloned |
R3378 | T4107 | T4108 | compound | vector,pCR4-TOPO |
R3379 | T4108 | T4106 | pobj | pCR4-TOPO,into |
R3380 | T4109 | T4110 | punct | (,Invitrogen |
R3381 | T4110 | T4108 | appos | Invitrogen,pCR4-TOPO |
R3382 | T4111 | T4110 | punct | ),Invitrogen |
R3383 | T4112 | T4105 | cc | and,T/A-cloned |
R3384 | T4113 | T4105 | conj | sequenced,T/A-cloned |
R3385 | T4114 | T4089 | punct | .,analyzed |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3863 | 0-51 | Sentence | denotes | 5′-Rapid amplification of cDNA ends analysis (RACE) |
T3864 | 52-125 | Sentence | denotes | Total RNA was isolated from A3.01 T cells using RNeasy mini kit (Qiagen). |
T3865 | 126-275 | Sentence | denotes | The transcriptional start sites of A3G were identified using the 5′/3′ RACE Kit, 2nd Generation (Roche) according to the manufacturer's instructions. |
T3866 | 276-492 | Sentence | denotes | The following primers were used: RACE-APO3G1 (5′-TATCCCTTGTACACTTTGT-3′) for cDNA synthesis, RACE-APO3G2 (5′-CATACTCCTGGTCACGAT-3′) for the first PCR and RACE-APO3Gnest (5′-GAATACACCTGGCCTCGAA-3′) for the nested PCR. |
T3867 | 493-670 | Sentence | denotes | Reaction products were analyzed by agarose gel electrophoresis, purified using QIAquick gel extraction kit (Qiagen), T/A-cloned into vector pCR4-TOPO (Invitrogen) and sequenced. |
T68 | 0-51 | Sentence | denotes | 5′-Rapid amplification of cDNA ends analysis (RACE) |
T69 | 52-125 | Sentence | denotes | Total RNA was isolated from A3.01 T cells using RNeasy mini kit (Qiagen). |
T70 | 126-275 | Sentence | denotes | The transcriptional start sites of A3G were identified using the 5′/3′ RACE Kit, 2nd Generation (Roche) according to the manufacturer's instructions. |
T71 | 276-492 | Sentence | denotes | The following primers were used: RACE-APO3G1 (5′-TATCCCTTGTACACTTTGT-3′) for cDNA synthesis, RACE-APO3G2 (5′-CATACTCCTGGTCACGAT-3′) for the first PCR and RACE-APO3Gnest (5′-GAATACACCTGGCCTCGAA-3′) for the nested PCR. |
T72 | 493-670 | Sentence | denotes | Reaction products were analyzed by agarose gel electrophoresis, purified using QIAquick gel extraction kit (Qiagen), T/A-cloned into vector pCR4-TOPO (Invitrogen) and sequenced. |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3870 | 0-8 | JJ | denotes | 5′-Rapid |
T3871 | 9-22 | NN | denotes | amplification |
T3872 | 23-25 | IN | denotes | of |
T3873 | 26-30 | NN | denotes | cDNA |
T3874 | 31-35 | VB | denotes | ends |
T3875 | 36-44 | NN | denotes | analysis |
T3876 | 45-46 | -LRB- | denotes | ( |
T3877 | 46-50 | NN | denotes | RACE |
T3878 | 50-51 | -RRB- | denotes | ) |
T3879 | 52-57 | JJ | denotes | Total |
T3880 | 58-61 | NN | denotes | RNA |
T3881 | 62-65 | VB | denotes | was |
T3882 | 66-74 | VB | denotes | isolated |
T3883 | 75-79 | IN | denotes | from |
T3884 | 80-87 | NN | denotes | A3.01 T |
T3885 | 88-93 | NN | denotes | cells |
T3886 | 94-99 | VB | denotes | using |
T3887 | 100-106 | NN | denotes | RNeasy |
T3888 | 107-111 | NN | denotes | mini |
T3889 | 112-115 | NN | denotes | kit |
T3890 | 116-117 | -LRB- | denotes | ( |
T3891 | 117-123 | NN | denotes | Qiagen |
T3892 | 123-124 | -RRB- | denotes | ) |
T3893 | 126-129 | DT | denotes | The |
T3894 | 130-145 | JJ | denotes | transcriptional |
T3895 | 146-151 | NN | denotes | start |
T3896 | 152-157 | NN | denotes | sites |
T3897 | 158-160 | IN | denotes | of |
T3898 | 161-164 | NN | denotes | A3G |
T3899 | 165-169 | VB | denotes | were |
T3900 | 170-180 | VB | denotes | identified |
T3901 | 181-186 | VB | denotes | using |
T3902 | 187-190 | DT | denotes | the |
T3903 | 191-196 | NN | denotes | 5′/3′ |
T3904 | 197-201 | NN | denotes | RACE |
T3905 | 202-205 | NN | denotes | Kit |
T3906 | 205-206 | -COMMA- | denotes | , |
T3907 | 207-210 | NN | denotes | 2nd |
T3908 | 211-221 | NN | denotes | Generation |
T3909 | 222-223 | -LRB- | denotes | ( |
T3910 | 223-228 | NNP | denotes | Roche |
T3911 | 228-229 | -RRB- | denotes | ) |
T3912 | 230-239 | VB | denotes | according |
T3913 | 240-242 | TO | denotes | to |
T3914 | 243-246 | DT | denotes | the |
T3915 | 247-259 | NN | denotes | manufacturer |
T3916 | 259-261 | POS | denotes | 's |
T3917 | 262-274 | NN | denotes | instructions |
T3918 | 276-279 | DT | denotes | The |
T3919 | 280-289 | VB | denotes | following |
T3920 | 290-297 | NN | denotes | primers |
T3921 | 298-302 | VB | denotes | were |
T3922 | 303-307 | VB | denotes | used |
T3923 | 307-308 | -COLON- | denotes | : |
T3924 | 309-320 | NN | denotes | RACE-APO3G1 |
T3925 | 321-322 | -LRB- | denotes | ( |
T3926 | 322-347 | NN | denotes | 5′-TATCCCTTGTACACTTTGT-3′ |
T3927 | 347-348 | -RRB- | denotes | ) |
T3928 | 349-352 | IN | denotes | for |
T3929 | 353-357 | NN | denotes | cDNA |
T3930 | 358-367 | NN | denotes | synthesis |
T3931 | 367-368 | -COMMA- | denotes | , |
T3932 | 369-380 | NN | denotes | RACE-APO3G2 |
T3933 | 381-382 | -LRB- | denotes | ( |
T3934 | 382-406 | NN | denotes | 5′-CATACTCCTGGTCACGAT-3′ |
T3935 | 406-407 | -RRB- | denotes | ) |
T3936 | 408-411 | IN | denotes | for |
T3937 | 412-415 | DT | denotes | the |
T3938 | 416-421 | JJ | denotes | first |
T3939 | 422-425 | NN | denotes | PCR |
T3940 | 426-429 | CC | denotes | and |
T3941 | 430-444 | NN | denotes | RACE-APO3Gnest |
T3942 | 445-446 | -LRB- | denotes | ( |
T3943 | 446-471 | NN | denotes | 5′-GAATACACCTGGCCTCGAA-3′ |
T3944 | 471-472 | -RRB- | denotes | ) |
T3945 | 473-476 | IN | denotes | for |
T3946 | 477-480 | DT | denotes | the |
T3947 | 481-487 | JJ | denotes | nested |
T3948 | 488-491 | NN | denotes | PCR |
T3949 | 493-501 | NN | denotes | Reaction |
T3950 | 502-510 | NN | denotes | products |
T3951 | 511-515 | VB | denotes | were |
T3952 | 516-524 | VB | denotes | analyzed |
T3953 | 525-527 | IN | denotes | by |
T3954 | 528-535 | NN | denotes | agarose |
T3955 | 536-539 | NN | denotes | gel |
T3956 | 540-555 | NN | denotes | electrophoresis |
T3957 | 555-556 | -COMMA- | denotes | , |
T3958 | 557-565 | VB | denotes | purified |
T3959 | 566-571 | VB | denotes | using |
T3960 | 572-580 | JJ | denotes | QIAquick |
T3961 | 581-584 | NN | denotes | gel |
T3962 | 585-595 | NN | denotes | extraction |
T3963 | 596-599 | NN | denotes | kit |
T3964 | 600-601 | -LRB- | denotes | ( |
T3965 | 601-607 | NN | denotes | Qiagen |
T3966 | 607-608 | -RRB- | denotes | ) |
T3967 | 608-609 | -COMMA- | denotes | , |
T3968 | 610-620 | JJ | denotes | T/A-cloned |
T3969 | 621-625 | IN | denotes | into |
T3970 | 626-632 | NN | denotes | vector |
T3971 | 633-642 | NN | denotes | pCR4-TOPO |
T3972 | 643-644 | -LRB- | denotes | ( |
T3973 | 644-654 | NN | denotes | Invitrogen |
T3974 | 654-655 | -RRB- | denotes | ) |
T3975 | 656-659 | CC | denotes | and |
T3976 | 660-669 | VB | denotes | sequenced |
R3145 | T3871 | T3870 | arg1Of | amplification,5′-Rapid |
R3146 | T3871 | T3872 | arg1Of | amplification,of |
R3147 | T3871 | T3874 | arg1Of | amplification,ends |
R3148 | T3873 | T3872 | arg2Of | cDNA,of |
R3149 | T3875 | T3874 | arg2Of | analysis,ends |
R3150 | T3875 | T3876 | arg1Of | analysis,( |
R3151 | T3877 | T3876 | arg2Of | RACE,( |
R3152 | T3878 | T3876 | arg3Of | ),( |
R3153 | T3880 | T3879 | arg1Of | RNA,Total |
R3154 | T3880 | T3881 | arg1Of | RNA,was |
R3155 | T3880 | T3882 | arg2Of | RNA,isolated |
R3156 | T3882 | T3881 | arg2Of | isolated,was |
R3157 | T3882 | T3883 | arg1Of | isolated,from |
R3158 | T3885 | T3883 | arg2Of | cells,from |
R3159 | T3885 | T3884 | arg1Of | cells,A3.01 T |
R3160 | T3886 | T3882 | arg3Of | using,isolated |
R3161 | T3889 | T3886 | arg2Of | kit,using |
R3162 | T3889 | T3887 | arg1Of | kit,RNeasy |
R3163 | T3889 | T3888 | arg1Of | kit,mini |
R3164 | T3889 | T3890 | arg1Of | kit,( |
R3165 | T3891 | T3890 | arg2Of | Qiagen,( |
R3166 | T3892 | T3890 | arg3Of | ),( |
R3167 | T3896 | T3893 | arg1Of | sites,The |
R3168 | T3896 | T3894 | arg1Of | sites,transcriptional |
R3169 | T3896 | T3895 | arg1Of | sites,start |
R3170 | T3896 | T3897 | arg1Of | sites,of |
R3171 | T3896 | T3899 | arg1Of | sites,were |
R3172 | T3896 | T3900 | arg2Of | sites,identified |
R3173 | T3898 | T3897 | arg2Of | A3G,of |
R3174 | T3900 | T3899 | arg2Of | identified,were |
R3175 | T3901 | T3900 | arg3Of | using,identified |
R3176 | T3901 | T3909 | arg1Of | using,( |
R3177 | T3901 | T3912 | arg1Of | using,according |
R3178 | T3905 | T3901 | arg2Of | Kit,using |
R3179 | T3905 | T3902 | arg1Of | Kit,the |
R3180 | T3905 | T3903 | arg1Of | Kit,5′/3′ |
R3181 | T3905 | T3904 | arg1Of | Kit,RACE |
R3182 | T3905 | T3906 | arg1Of | Kit,"," |
R3183 | T3908 | T3906 | arg2Of | Generation,"," |
R3184 | T3908 | T3907 | arg1Of | Generation,2nd |
R3185 | T3910 | T3909 | arg2Of | Roche,( |
R3186 | T3911 | T3909 | arg3Of | ),( |
R3187 | T3913 | T3912 | arg2Of | to,according |
R3188 | T3915 | T3914 | arg1Of | manufacturer,the |
R3189 | T3915 | T3916 | arg2Of | manufacturer,'s |
R3190 | T3917 | T3913 | arg2Of | instructions,to |
R3191 | T3917 | T3916 | arg1Of | instructions,'s |
R3192 | T3920 | T3918 | arg1Of | primers,The |
R3193 | T3920 | T3919 | arg1Of | primers,following |
R3194 | T3920 | T3921 | arg1Of | primers,were |
R3195 | T3920 | T3922 | arg2Of | primers,used |
R3196 | T3922 | T3921 | arg2Of | used,were |
R3197 | T3922 | T3923 | arg1Of | used,: |
R3198 | T3922 | T3924 | arg1Of | used,RACE-APO3G1 |
R3199 | T3922 | T3928 | arg1Of | used,for |
R3200 | T3922 | T3945 | arg1Of | used,for |
R3201 | T3924 | T3925 | arg1Of | RACE-APO3G1,( |
R3202 | T3926 | T3925 | arg2Of | 5′-TATCCCTTGTACACTTTGT-3′,( |
R3203 | T3927 | T3925 | arg3Of | ),( |
R3204 | T3930 | T3929 | arg1Of | synthesis,cDNA |
R3205 | T3930 | T3931 | arg1Of | synthesis,"," |
R3206 | T3931 | T3940 | arg1Of | ",",and |
R3207 | T3932 | T3931 | arg2Of | RACE-APO3G2,"," |
R3208 | T3932 | T3933 | arg1Of | RACE-APO3G2,( |
R3209 | T3932 | T3936 | arg1Of | RACE-APO3G2,for |
R3210 | T3934 | T3933 | arg2Of | 5′-CATACTCCTGGTCACGAT-3′,( |
R3211 | T3935 | T3933 | arg3Of | ),( |
R3212 | T3939 | T3936 | arg2Of | PCR,for |
R3213 | T3939 | T3937 | arg1Of | PCR,the |
R3214 | T3939 | T3938 | arg1Of | PCR,first |
R3215 | T3940 | T3928 | arg2Of | and,for |
R3216 | T3941 | T3940 | arg2Of | RACE-APO3Gnest,and |
R3217 | T3941 | T3942 | arg1Of | RACE-APO3Gnest,( |
R3218 | T3943 | T3942 | arg2Of | 5′-GAATACACCTGGCCTCGAA-3′,( |
R3219 | T3944 | T3942 | arg3Of | ),( |
R3220 | T3948 | T3945 | arg2Of | PCR,for |
R3221 | T3948 | T3946 | arg1Of | PCR,the |
R3222 | T3948 | T3947 | arg1Of | PCR,nested |
R3223 | T3950 | T3949 | arg1Of | products,Reaction |
R3224 | T3950 | T3951 | arg1Of | products,were |
R3225 | T3950 | T3952 | arg2Of | products,analyzed |
R3235 | T3956 | T3952 | arg1Of | electrophoresis,analyzed |
R3236 | T3956 | T3953 | arg2Of | electrophoresis,by |
R3252 | T3975 | T3951 | arg2Of | and,were |
R3226 | T3950 | T3958 | arg2Of | products,purified |
R3227 | T3950 | T3968 | arg1Of | products,T/A-cloned |
R3228 | T3950 | T3976 | arg2Of | products,sequenced |
R3229 | T3952 | T3957 | arg1Of | analyzed,"," |
R3230 | T3952 | T3958 | modOf | analyzed,purified |
R3231 | T3952 | T3959 | modOf | analyzed,using |
R3232 | T3952 | T3967 | arg1Of | analyzed,"," |
R3233 | T3952 | T3968 | modOf | analyzed,T/A-cloned |
R3234 | T3952 | T3975 | arg1Of | analyzed,and |
R3237 | T3956 | T3954 | arg1Of | electrophoresis,agarose |
R3238 | T3956 | T3955 | arg1Of | electrophoresis,gel |
R3239 | T3963 | T3959 | arg2Of | kit,using |
R3240 | T3963 | T3960 | arg1Of | kit,QIAquick |
R3241 | T3963 | T3961 | arg1Of | kit,gel |
R3242 | T3963 | T3962 | arg1Of | kit,extraction |
R3243 | T3963 | T3964 | arg1Of | kit,( |
R3244 | T3965 | T3964 | arg2Of | Qiagen,( |
R3245 | T3966 | T3964 | arg3Of | ),( |
R3246 | T3968 | T3969 | arg1Of | T/A-cloned,into |
R3247 | T3971 | T3969 | arg2Of | pCR4-TOPO,into |
R3248 | T3971 | T3970 | arg1Of | pCR4-TOPO,vector |
R3249 | T3971 | T3972 | arg1Of | pCR4-TOPO,( |
R3250 | T3973 | T3972 | arg2Of | Invitrogen,( |
R3251 | T3974 | T3972 | arg3Of | ),( |
R3253 | T3976 | T3975 | arg2Of | sequenced,and |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4121 | 161-164 | Protein | denotes | A3G |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4122 | 161-164 | Protein | denotes | A3G |
T4123 | 369-373 | Protein | denotes | RACE |
T4124 | 374-380 | Protein | denotes | APO3G2 |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3862 | 161-164 | Protein | denotes | A3G |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3977 | 161-164 | Q9HC16 | denotes | A3G |