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PMC:1920263 / 10-168 JSONTXT

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test2

Id Subject Object Predicate Lexical cue Negation
T24 2-10 Regulation denotes regulate
T25 17-30 Transcription denotes transcription
T26 44-52 Protein denotes APOBEC3G
T27 69-77 Protein denotes APOBEC3G true
T28 79-82 Protein denotes A3G
R18 T25 T24 themeOf transcription,regulate
R19 T26 T25 themeOf APOBEC3G,transcription
R21 T28 T27 equivalentTo A3G,APOBEC3G

GO-BP

Id Subject Object Predicate Lexical cue
T73 17-30 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T11409 17-30 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T321 2-10 VB denotes regulate
T322 11-16 JJ denotes basal
T323 17-30 NN denotes transcription
T324 31-33 IN denotes of
T325 34-37 DT denotes the
T326 38-43 JJ denotes human
T327 44-52 NNP denotes APOBEC3G
T328 53-57 NN denotes gene
T329 69-77 NNP denotes APOBEC3G
T330 78-79 -LRB- denotes (
T331 79-82 NNP denotes A3G
T332 82-83 -RRB- denotes )
T333 83-84 , denotes ,
T334 85-86 DT denotes a
T335 87-93 NN denotes member
T336 94-96 IN denotes of
T337 97-100 DT denotes the
T338 101-109 RB denotes recently
T339 110-120 VBN denotes discovered
T340 121-127 NN denotes family
T341 128-130 IN denotes of
T342 131-136 JJ denotes human
T343 137-145 NN denotes cytidine
T344 146-156 NNS denotes deaminases
T345 156-157 , denotes ,
T11944 17-30 NN denotes transcription
R270 T322 T323 amod basal,transcription
R271 T323 T321 dobj transcription,regulate
R272 T324 T323 prep of,transcription
R273 T325 T328 det the,gene
R274 T326 T328 amod human,gene
R275 T327 T328 compound APOBEC3G,gene
R276 T328 T324 pobj gene,of
R277 T329 T328 appos APOBEC3G,gene
R278 T330 T331 punct (,A3G
R279 T331 T329 appos A3G,APOBEC3G
R280 T332 T329 punct ),APOBEC3G
R281 T333 T328 punct ",",gene
R282 T334 T335 det a,member
R283 T335 T328 appos member,gene
R284 T336 T335 prep of,member
R285 T337 T340 det the,family
R286 T338 T339 advmod recently,discovered
R287 T339 T340 amod discovered,family
R288 T340 T336 pobj family,of
R289 T341 T340 prep of,family
R290 T342 T344 amod human,deaminases
R291 T343 T344 compound cytidine,deaminases
R292 T344 T341 pobj deaminases,of

sentences

Id Subject Object Predicate Lexical cue
T2 60-68 Sentence denotes Abstract

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T79 2-10 VB denotes regulate
T80 11-16 JJ denotes basal
T81 17-30 NN denotes transcription
T82 31-33 IN denotes of
T83 34-37 DT denotes the
T84 38-43 JJ denotes human
T85 44-52 NN denotes APOBEC3G
T86 53-57 NN denotes gene
T87 69-77 NN denotes APOBEC3G
T88 78-79 -LRB- denotes (
T89 79-82 NN denotes A3G
T90 82-83 -RRB- denotes )
T91 83-84 -COMMA- denotes ,
T92 85-86 DT denotes a
T93 87-93 NN denotes member
T94 94-96 IN denotes of
T95 97-100 DT denotes the
T96 101-109 RB denotes recently
T97 110-120 VB denotes discovered
T98 121-127 NN denotes family
T99 128-130 IN denotes of
T100 131-136 JJ denotes human
T101 137-145 NN denotes cytidine
T102 146-156 NN denotes deaminases
T103 156-157 -COMMA- denotes ,
T11429 17-30 NN denotes transcription
R45 T81 T79 arg2Of transcription,regulate
R46 T81 T80 arg1Of transcription,basal
R47 T81 T82 arg1Of transcription,of
R48 T86 T82 arg2Of gene,of
R49 T86 T83 arg1Of gene,the
R50 T86 T84 arg1Of gene,human
R51 T86 T85 arg1Of gene,APOBEC3G
R52 T87 T88 arg1Of APOBEC3G,(
R53 T87 T91 arg1Of APOBEC3G,","
R61 T89 T88 arg2Of A3G,(
R62 T90 T88 arg3Of ),(
R63 T93 T91 arg2Of member,","
R64 T93 T92 arg1Of member,a
R65 T93 T94 arg1Of member,of
R66 T97 T96 arg1Of discovered,recently
R67 T98 T94 arg2Of family,of
R68 T98 T95 arg1Of family,the
R69 T98 T97 arg1Of family,discovered
R70 T98 T99 arg1Of family,of
R71 T102 T99 arg2Of deaminases,of
R72 T102 T100 arg1Of deaminases,human
R73 T102 T101 arg1Of deaminases,cytidine

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T294 69-77 Antecedent denotes APOBEC3G

events-check-again

Id Subject Object Predicate Lexical cue
T659 2-10 Regulation denotes regulate
T660 2-10 Regulation denotes regulate
T661 17-30 Transcription denotes transcription
T662 44-52 Protein denotes APOBEC3G
T663 69-77 Protein denotes APOBEC3G
T664 79-82 Protein denotes A3G
R547 T661 T660 themeOf transcription,regulate
R548 T661 T659 themeOf transcription,regulate
R549 T662 T661 themeOf APOBEC3G,transcription
R552 T664 T663 equivalentTo A3G,APOBEC3G

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T680 38-57 Protein denotes human APOBEC3G gene
T681 17-30 Transcription denotes transcription
T682 2-10 Regulation denotes regulate
T683 2-10 Regulation denotes regulate
T684 69-77 Protein denotes APOBEC3G
T685 79-82 Protein denotes A3G
T686 121-156 Protein denotes family of human cytidine deaminases
R562 T680 T681 themeOf human APOBEC3G gene,transcription
R563 T681 T682 themeOf transcription,regulate
R564 T681 T683 themeOf transcription,regulate

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T45 2-10 Regulation denotes regulate
T46 2-10 Regulation denotes regulate
T47 17-30 Transcription denotes transcription
T48 44-52 Protein denotes APOBEC3G
T49 69-77 Protein denotes APOBEC3G
T50 79-82 Protein denotes A3G
R29 T47 T46 themeOf transcription,regulate
R30 T47 T45 themeOf transcription,regulate
R31 T48 T47 themeOf APOBEC3G,transcription
R34 T50 T49 equivalentTo A3G,APOBEC3G

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T297 44-52 Q9HC16 denotes APOBEC3G
T298 69-77 Q9HC16 denotes APOBEC3G
T299 79-82 Q9HC16 denotes A3G