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PMC:1920263 / 0-735 JSONTXT

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test2

Id Subject Object Predicate Lexical cue Negation
T22 0-3 Protein denotes Sp1
T23 8-11 Protein denotes Sp3
T24 12-20 Regulation denotes regulate
T25 27-40 Transcription denotes transcription
T26 54-62 Protein denotes APOBEC3G
T27 79-87 Protein denotes APOBEC3G true
T28 89-92 Protein denotes A3G
T29 171-180 Gene_expression denotes expressed
T30 419-422 Protein denotes A3G
T31 517-527 Protein denotes Luciferase
T32 720-723 Protein denotes A3G
T33 724-732 Entity denotes promoter
T11310 0-3 Protein denotes Sp1
T11311 8-11 Protein denotes Sp3
R16 T22 T24 causeOf Sp1,regulate
R17 T23 T24 causeOf Sp3,regulate
R18 T25 T24 themeOf transcription,regulate
R19 T26 T25 themeOf APOBEC3G,transcription
R20 T27 T29 themeOf APOBEC3G,expressed
R21 T28 T27 equivalentTo A3G,APOBEC3G
R23 T33 T32 partOf promoter,A3G

GO-CC

Id Subject Object Predicate Lexical cue
T555 709-714 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

GO-BP

Id Subject Object Predicate Lexical cue
T73 27-40 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T75 329-339 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation
T11409 27-40 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

UBERON-AE

Id Subject Object Predicate Lexical cue
T42 195-200 http://purl.obolibrary.org/obo/UBERON_0000178 denotes blood

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T318 0-3 CD denotes Sp1
T319 4-7 CC denotes and
T320 8-11 JJ denotes Sp3
T321 12-20 VB denotes regulate
T322 21-26 JJ denotes basal
T323 27-40 NN denotes transcription
T324 41-43 IN denotes of
T325 44-47 DT denotes the
T326 48-53 JJ denotes human
T327 54-62 NNP denotes APOBEC3G
T328 63-67 NN denotes gene
T329 79-87 NNP denotes APOBEC3G
T330 88-89 -LRB- denotes (
T331 89-92 NNP denotes A3G
T332 92-93 -RRB- denotes )
T333 93-94 , denotes ,
T334 95-96 DT denotes a
T335 97-103 NN denotes member
T336 104-106 IN denotes of
T337 107-110 DT denotes the
T338 111-119 RB denotes recently
T339 120-130 VBN denotes discovered
T340 131-137 NN denotes family
T341 138-140 IN denotes of
T342 141-146 JJ denotes human
T343 147-155 NN denotes cytidine
T344 156-166 NNS denotes deaminases
T345 166-167 , denotes ,
T346 168-170 VBZ denotes is
T347 171-180 VBN denotes expressed
T348 181-183 IN denotes in
T349 184-194 JJ denotes peripheral
T350 195-200 NN denotes blood
T351 201-212 NNS denotes lymphocytes
T352 213-216 CC denotes and
T353 217-220 VBZ denotes has
T354 221-225 VBN denotes been
T355 226-231 VBN denotes shown
T356 232-234 TO denotes to
T357 235-237 VB denotes be
T358 238-244 JJ denotes active
T359 245-252 IN denotes against
T360 253-258 NNP denotes HIV-1
T361 259-262 CC denotes and
T362 263-268 JJ denotes other
T363 269-281 NNS denotes retroviruses
T364 281-282 . denotes .
T365 283-285 TO denotes To
T366 286-290 VB denotes gain
T367 291-294 JJ denotes new
T368 295-303 NNS denotes insights
T369 304-308 IN denotes into
T370 309-312 DT denotes the
T371 313-328 JJ denotes transcriptional
T372 329-339 NN denotes regulation
T373 340-342 IN denotes of
T374 343-347 DT denotes this
T375 348-359 NN denotes restriction
T376 360-366 NN denotes factor
T377 366-367 , denotes ,
T378 368-370 PRP denotes we
T379 371-377 VBD denotes cloned
T380 378-381 CC denotes and
T381 382-395 VBD denotes characterized
T382 396-399 DT denotes the
T383 400-408 NN denotes promoter
T384 409-415 NN denotes region
T385 416-418 IN denotes of
T386 419-422 NNP denotes A3G
T387 422-423 . denotes .
T388 424-439 JJ denotes Transcriptional
T389 440-445 NN denotes start
T390 446-451 NNS denotes sites
T391 452-456 VBD denotes were
T392 457-467 VBN denotes identified
T393 468-470 IN denotes by
T394 471-472 CD denotes 5
T395 472-473 SYM denotes ′
T396 473-474 : denotes -
T397 474-479 JJ denotes rapid
T398 480-493 NN denotes amplification
T399 494-496 IN denotes of
T400 497-501 NNP denotes cDNA
T401 502-506 VBZ denotes ends
T402 507-515 NN denotes analysis
T403 515-516 . denotes .
T404 517-527 NNP denotes Luciferase
T405 528-536 NN denotes reporter
T406 537-543 NNS denotes assays
T407 544-556 VBD denotes demonstrated
T408 557-561 IN denotes that
T409 562-563 DT denotes a
T410 564-568 CD denotes 1025
T411 569-571 NN denotes bp
T412 572-575 CD denotes A3G
T413 576-584 NN denotes promoter
T414 585-593 NN denotes sequence
T415 594-595 -LRB- denotes (
T416 595-599 IN denotes from
T417 600-601 CD denotes −
T418 601-604 CD denotes 959
T419 605-607 TO denotes to
T420 608-611 CD denotes +66
T421 612-620 JJ denotes relative
T422 621-623 TO denotes to
T423 624-627 DT denotes the
T424 628-633 JJ denotes major
T425 634-649 JJ denotes transcriptional
T426 650-655 NN denotes start
T427 656-660 NN denotes site
T428 660-661 -RRB- denotes )
T429 662-671 VBD denotes displayed
T430 672-684 JJ denotes constitutive
T431 685-693 NN denotes promoter
T432 694-702 NN denotes activity
T433 702-703 . denotes .
T434 704-706 IN denotes In
T435 707-708 NNP denotes T
T436 709-714 NNS denotes cells
T437 714-715 , denotes ,
T438 716-719 DT denotes the
T439 720-723 NNP denotes A3G
T440 724-732 NN denotes promoter
T11941 0-3 CD denotes Sp1
T11942 4-7 CC denotes and
T11943 8-11 JJ denotes Sp3
T11944 27-40 NN denotes transcription
R266 T318 T347 nsubjpass Sp1,expressed
R267 T319 T318 cc and,Sp1
R268 T320 T321 nsubj Sp3,regulate
R269 T321 T318 conj regulate,Sp1
R270 T322 T323 amod basal,transcription
R271 T323 T321 dobj transcription,regulate
R272 T324 T323 prep of,transcription
R273 T325 T328 det the,gene
R274 T326 T328 amod human,gene
R275 T327 T328 compound APOBEC3G,gene
R276 T328 T324 pobj gene,of
R277 T329 T328 appos APOBEC3G,gene
R278 T330 T331 punct (,A3G
R279 T331 T329 appos A3G,APOBEC3G
R280 T332 T329 punct ),APOBEC3G
R281 T333 T328 punct ",",gene
R282 T334 T335 det a,member
R283 T335 T328 appos member,gene
R284 T336 T335 prep of,member
R285 T337 T340 det the,family
R286 T338 T339 advmod recently,discovered
R287 T339 T340 amod discovered,family
R288 T340 T336 pobj family,of
R289 T341 T340 prep of,family
R290 T342 T344 amod human,deaminases
R291 T343 T344 compound cytidine,deaminases
R292 T344 T341 pobj deaminases,of
R293 T345 T347 punct ",",expressed
R294 T346 T347 auxpass is,expressed
R295 T347 T347 ROOT expressed,expressed
R296 T348 T347 prep in,expressed
R297 T349 T351 amod peripheral,lymphocytes
R298 T350 T351 compound blood,lymphocytes
R299 T351 T348 pobj lymphocytes,in
R300 T352 T347 cc and,expressed
R301 T353 T355 aux has,shown
R302 T354 T355 auxpass been,shown
R303 T355 T347 conj shown,expressed
R304 T356 T357 aux to,be
R305 T357 T355 xcomp be,shown
R306 T358 T357 acomp active,be
R307 T359 T358 prep against,active
R308 T360 T359 pobj HIV-1,against
R309 T361 T360 cc and,HIV-1
R310 T362 T363 amod other,retroviruses
R311 T363 T360 conj retroviruses,HIV-1
R312 T364 T347 punct .,expressed
R313 T365 T366 aux To,gain
R314 T366 T379 advcl gain,cloned
R315 T367 T368 amod new,insights
R316 T368 T366 dobj insights,gain
R317 T369 T368 prep into,insights
R318 T370 T372 det the,regulation
R319 T371 T372 amod transcriptional,regulation
R320 T372 T369 pobj regulation,into
R321 T373 T372 prep of,regulation
R322 T374 T376 det this,factor
R323 T375 T376 compound restriction,factor
R324 T376 T373 pobj factor,of
R325 T377 T379 punct ",",cloned
R326 T378 T379 nsubj we,cloned
R327 T379 T379 ROOT cloned,cloned
R328 T380 T379 cc and,cloned
R329 T381 T379 conj characterized,cloned
R330 T382 T384 det the,region
R331 T383 T384 compound promoter,region
R332 T384 T381 dobj region,characterized
R333 T385 T384 prep of,region
R334 T386 T385 pobj A3G,of
R335 T387 T379 punct .,cloned
R336 T388 T390 amod Transcriptional,sites
R337 T389 T390 compound start,sites
R338 T390 T392 nsubjpass sites,identified
R339 T391 T392 auxpass were,identified
R340 T392 T392 ROOT identified,identified
R341 T393 T392 prep by,identified
R342 T394 T398 nummod 5,amplification
R343 T395 T397 punct ′,rapid
R344 T396 T397 punct -,rapid
R345 T397 T398 amod rapid,amplification
R346 T398 T393 pobj amplification,by
R347 T399 T398 prep of,amplification
R348 T400 T399 pobj cDNA,of
R349 T401 T392 conj ends,identified
R350 T402 T401 dobj analysis,ends
R351 T403 T392 punct .,identified
R352 T404 T406 compound Luciferase,assays
R353 T405 T406 compound reporter,assays
R354 T406 T407 nsubj assays,demonstrated
R355 T407 T407 ROOT demonstrated,demonstrated
R356 T408 T429 mark that,displayed
R357 T409 T414 det a,sequence
R358 T410 T414 nummod 1025,sequence
R359 T411 T414 nmod bp,sequence
R360 T412 T414 nummod A3G,sequence
R361 T413 T414 compound promoter,sequence
R362 T414 T429 nsubj sequence,displayed
R363 T415 T414 punct (,sequence
R364 T416 T414 prep from,sequence
R365 T417 T420 quantmod −,+66
R366 T418 T420 quantmod 959,+66
R367 T419 T420 quantmod to,+66
R368 T420 T416 pobj +66,from
R369 T421 T414 amod relative,sequence
R370 T422 T421 prep to,relative
R371 T423 T427 det the,site
R372 T424 T427 amod major,site
R373 T425 T427 amod transcriptional,site
R374 T426 T427 compound start,site
R375 T427 T422 pobj site,to
R376 T428 T414 punct ),sequence
R377 T429 T407 ccomp displayed,demonstrated
R378 T430 T432 amod constitutive,activity
R379 T431 T432 compound promoter,activity
R380 T432 T429 dobj activity,displayed
R381 T433 T407 punct .,demonstrated
R383 T435 T436 compound T,cells
R384 T436 T434 pobj cells,In
R386 T438 T440 det the,promoter
R387 T439 T440 compound A3G,promoter
R9721 T11942 T11941 cc and,Sp1

sentences

Id Subject Object Predicate Lexical cue
T64 0-67 Sentence denotes Sp1 and Sp3 regulate basal transcription of the human APOBEC3G gene
T65 79-282 Sentence denotes APOBEC3G (A3G), a member of the recently discovered family of human cytidine deaminases, is expressed in peripheral blood lymphocytes and has been shown to be active against HIV-1 and other retroviruses.
T66 283-423 Sentence denotes To gain new insights into the transcriptional regulation of this restriction factor, we cloned and characterized the promoter region of A3G.
T67 424-516 Sentence denotes Transcriptional start sites were identified by 5′-rapid amplification of cDNA ends analysis.
T68 517-703 Sentence denotes Luciferase reporter assays demonstrated that a 1025 bp A3G promoter sequence (from −959 to +66 relative to the major transcriptional start site) displayed constitutive promoter activity.
T1 0-67 Sentence denotes Sp1 and Sp3 regulate basal transcription of the human APOBEC3G gene
T2 70-78 Sentence denotes Abstract
T3 79-282 Sentence denotes APOBEC3G (A3G), a member of the recently discovered family of human cytidine deaminases, is expressed in peripheral blood lymphocytes and has been shown to be active against HIV-1 and other retroviruses.
T4 283-423 Sentence denotes To gain new insights into the transcriptional regulation of this restriction factor, we cloned and characterized the promoter region of A3G.
T5 424-516 Sentence denotes Transcriptional start sites were identified by 5′-rapid amplification of cDNA ends analysis.
T6 517-703 Sentence denotes Luciferase reporter assays demonstrated that a 1025 bp A3G promoter sequence (from −959 to +66 relative to the major transcriptional start site) displayed constitutive promoter activity.

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T76 0-3 NN denotes Sp1
T77 4-7 CC denotes and
T78 8-11 NN denotes Sp3
T79 12-20 VB denotes regulate
T80 21-26 JJ denotes basal
T81 27-40 NN denotes transcription
T82 41-43 IN denotes of
T83 44-47 DT denotes the
T84 48-53 JJ denotes human
T85 54-62 NN denotes APOBEC3G
T86 63-67 NN denotes gene
T87 79-87 NN denotes APOBEC3G
T88 88-89 -LRB- denotes (
T89 89-92 NN denotes A3G
T90 92-93 -RRB- denotes )
T91 93-94 -COMMA- denotes ,
T92 95-96 DT denotes a
T93 97-103 NN denotes member
T94 104-106 IN denotes of
T95 107-110 DT denotes the
T96 111-119 RB denotes recently
T97 120-130 VB denotes discovered
T98 131-137 NN denotes family
T99 138-140 IN denotes of
T100 141-146 JJ denotes human
T101 147-155 NN denotes cytidine
T102 156-166 NN denotes deaminases
T103 166-167 -COMMA- denotes ,
T104 168-170 VB denotes is
T105 171-180 VB denotes expressed
T106 181-183 IN denotes in
T107 184-194 JJ denotes peripheral
T108 195-200 NN denotes blood
T109 201-212 NN denotes lymphocytes
T110 213-216 CC denotes and
T111 217-220 VB denotes has
T112 221-225 VB denotes been
T113 226-231 VB denotes shown
T114 232-234 TO denotes to
T115 235-237 VB denotes be
T116 238-244 JJ denotes active
T117 245-252 IN denotes against
T118 253-258 NN denotes HIV-1
T119 259-262 CC denotes and
T120 263-268 JJ denotes other
T121 269-281 NN denotes retroviruses
T122 283-285 TO denotes To
T123 286-290 VB denotes gain
T124 291-294 JJ denotes new
T125 295-303 NN denotes insights
T126 304-308 IN denotes into
T127 309-312 DT denotes the
T128 313-328 JJ denotes transcriptional
T129 329-339 NN denotes regulation
T130 340-342 IN denotes of
T131 343-347 DT denotes this
T132 348-359 NN denotes restriction
T133 360-366 NN denotes factor
T134 366-367 -COMMA- denotes ,
T135 368-370 PRP denotes we
T136 371-377 VB denotes cloned
T137 378-381 CC denotes and
T138 382-395 VB denotes characterized
T139 396-399 DT denotes the
T140 400-408 NN denotes promoter
T141 409-415 NN denotes region
T142 416-418 IN denotes of
T143 419-422 NN denotes A3G
T144 424-439 JJ denotes Transcriptional
T145 440-445 NN denotes start
T146 446-451 NN denotes sites
T147 452-456 VB denotes were
T148 457-467 VB denotes identified
T149 468-470 IN denotes by
T150 471-479 JJ denotes 5′-rapid
T151 480-493 NN denotes amplification
T152 494-496 IN denotes of
T153 497-501 NN denotes cDNA
T154 502-506 VB denotes ends
T155 507-515 NN denotes analysis
T156 517-527 NN denotes Luciferase
T157 528-536 NN denotes reporter
T158 537-543 NN denotes assays
T159 544-556 VB denotes demonstrated
T160 557-561 IN denotes that
T161 562-563 DT denotes a
T162 564-571 NN denotes 1025 bp
T163 572-575 NN denotes A3G
T164 576-584 NN denotes promoter
T165 585-593 NN denotes sequence
T166 594-595 -LRB- denotes (
T167 595-599 IN denotes from
T168 600-604 CD denotes −959
T169 605-607 TO denotes to
T170 608-611 CD denotes +66
T171 612-620 JJ denotes relative
T172 621-623 TO denotes to
T173 624-627 DT denotes the
T174 628-633 JJ denotes major
T175 634-649 JJ denotes transcriptional
T176 650-655 NN denotes start
T177 656-660 NN denotes site
T178 660-661 -RRB- denotes )
T179 662-671 VB denotes displayed
T180 672-684 JJ denotes constitutive
T181 685-693 NN denotes promoter
T182 694-702 NN denotes activity
T183 704-706 IN denotes In
T184 707-708 NN denotes T
T185 709-714 NN denotes cells
T186 714-715 -COMMA- denotes ,
T187 716-719 DT denotes the
T188 720-723 NN denotes A3G
T189 724-732 NN denotes promoter
T11426 0-3 NN denotes Sp1
T11427 4-7 CC denotes and
T11428 8-11 NN denotes Sp3
T11429 27-40 NN denotes transcription
R42 T76 T77 arg1Of Sp1,and
R43 T77 T79 arg1Of and,regulate
R44 T78 T77 arg2Of Sp3,and
R45 T81 T79 arg2Of transcription,regulate
R46 T81 T80 arg1Of transcription,basal
R47 T81 T82 arg1Of transcription,of
R48 T86 T82 arg2Of gene,of
R49 T86 T83 arg1Of gene,the
R50 T86 T84 arg1Of gene,human
R51 T86 T85 arg1Of gene,APOBEC3G
R52 T87 T88 arg1Of APOBEC3G,(
R53 T87 T91 arg1Of APOBEC3G,","
R54 T87 T104 arg1Of APOBEC3G,is
R55 T87 T105 arg2Of APOBEC3G,expressed
R56 T87 T111 arg1Of APOBEC3G,has
R57 T87 T112 arg1Of APOBEC3G,been
R58 T87 T113 arg2Of APOBEC3G,shown
R59 T87 T115 arg1Of APOBEC3G,be
R60 T87 T116 arg1Of APOBEC3G,active
R61 T89 T88 arg2Of A3G,(
R62 T90 T88 arg3Of ),(
R63 T93 T91 arg2Of member,","
R64 T93 T92 arg1Of member,a
R65 T93 T94 arg1Of member,of
R66 T97 T96 arg1Of discovered,recently
R67 T98 T94 arg2Of family,of
R68 T98 T95 arg1Of family,the
R69 T98 T97 arg1Of family,discovered
R70 T98 T99 arg1Of family,of
R71 T102 T99 arg2Of deaminases,of
R72 T102 T100 arg1Of deaminases,human
R73 T102 T101 arg1Of deaminases,cytidine
R74 T105 T104 arg2Of expressed,is
R75 T105 T106 arg1Of expressed,in
R76 T105 T110 arg1Of expressed,and
R77 T109 T106 arg2Of lymphocytes,in
R78 T109 T107 arg1Of lymphocytes,peripheral
R79 T109 T108 arg1Of lymphocytes,blood
R80 T110 T103 arg1Of and,","
R81 T113 T110 arg2Of shown,and
R82 T113 T111 arg2Of shown,has
R83 T113 T112 arg2Of shown,been
R84 T115 T113 arg3Of be,shown
R85 T115 T114 arg1Of be,to
R86 T116 T115 arg2Of active,be
R87 T116 T117 arg1Of active,against
R88 T118 T119 arg1Of HIV-1,and
R89 T119 T117 arg2Of and,against
R90 T121 T119 arg2Of retroviruses,and
R91 T121 T120 arg1Of retroviruses,other
R92 T123 T122 arg1Of gain,To
R93 T125 T123 arg2Of insights,gain
R94 T125 T124 arg1Of insights,new
R95 T125 T126 arg1Of insights,into
R96 T129 T126 arg2Of regulation,into
R97 T129 T127 arg1Of regulation,the
R98 T129 T128 arg1Of regulation,transcriptional
R99 T129 T130 arg1Of regulation,of
R100 T133 T130 arg2Of factor,of
R101 T133 T131 arg1Of factor,this
R102 T133 T132 arg1Of factor,restriction
R103 T135 T123 arg1Of we,gain
R104 T135 T136 arg1Of we,cloned
R105 T135 T138 arg1Of we,characterized
R106 T136 T137 arg1Of cloned,and
R107 T137 T122 modOf and,To
R108 T137 T134 arg1Of and,","
R109 T138 T137 arg2Of characterized,and
R110 T141 T136 arg2Of region,cloned
R111 T141 T138 arg2Of region,characterized
R112 T141 T139 arg1Of region,the
R113 T141 T140 arg1Of region,promoter
R114 T141 T142 arg1Of region,of
R115 T143 T142 arg2Of A3G,of
R116 T146 T144 arg1Of sites,Transcriptional
R117 T146 T145 arg1Of sites,start
R118 T146 T147 arg1Of sites,were
R119 T146 T148 arg2Of sites,identified
R120 T148 T147 arg2Of identified,were
R121 T151 T148 arg1Of amplification,identified
R122 T151 T149 arg2Of amplification,by
R123 T151 T150 arg1Of amplification,5′-rapid
R124 T153 T152 arg1Of cDNA,of
R125 T153 T154 arg1Of cDNA,ends
R126 T154 T147 modOf ends,were
R127 T155 T154 arg2Of analysis,ends
R128 T158 T156 arg1Of assays,Luciferase
R129 T158 T157 arg1Of assays,reporter
R130 T158 T159 arg1Of assays,demonstrated
R131 T165 T161 arg1Of sequence,a
R132 T165 T162 arg1Of sequence,1025 bp
R133 T165 T163 arg1Of sequence,A3G
R134 T165 T164 arg1Of sequence,promoter
R135 T165 T166 arg1Of sequence,(
R136 T165 T179 arg1Of sequence,displayed
R137 T167 T166 arg2Of from,(
R138 T170 T167 arg2Of +66,from
R139 T170 T168 arg1Of +66,−959
R140 T170 T169 arg1Of +66,to
R141 T170 T172 arg1Of +66,to
R142 T172 T171 arg1Of to,relative
R143 T177 T172 arg2Of site,to
R144 T177 T173 arg1Of site,the
R145 T177 T174 arg1Of site,major
R146 T177 T175 arg1Of site,transcriptional
R147 T177 T176 arg1Of site,start
R148 T178 T166 arg3Of ),(
R149 T179 T159 arg2Of displayed,demonstrated
R150 T179 T160 arg1Of displayed,that
R151 T182 T179 arg2Of activity,displayed
R152 T182 T180 arg1Of activity,constitutive
R153 T182 T181 arg1Of activity,promoter
R154 T185 T183 arg2Of cells,In
R155 T185 T184 arg1Of cells,T
R156 T189 T187 arg1Of promoter,the
R157 T189 T188 arg1Of promoter,A3G
R9254 T11426 T11427 arg1Of Sp1,and
R9255 T11428 T11427 arg2Of Sp3,and

bionlp-st-ge-2016-coref

Id Subject Object Predicate Lexical cue
T293 343-366 Anaphor denotes this restriction factor
T294 79-87 Antecedent denotes APOBEC3G
R572 T293 T294 boundBy this restriction factor,APOBEC3G

events-check-again

Id Subject Object Predicate Lexical cue
T657 0-3 Protein denotes Sp1
T658 8-11 Protein denotes Sp3
T659 12-20 Regulation denotes regulate
T660 12-20 Regulation denotes regulate
T661 27-40 Transcription denotes transcription
T662 54-62 Protein denotes APOBEC3G
T663 79-87 Protein denotes APOBEC3G
T664 89-92 Protein denotes A3G
T665 171-180 Gene_expression denotes expressed
T666 329-339 Regulation denotes regulation
T667 419-422 Protein denotes A3G
T668 517-527 Protein denotes Luciferase
T669 720-723 Protein denotes A3G
T670 724-732 Entity denotes promoter
T12702 0-3 Protein denotes Sp1
T12703 8-11 Protein denotes Sp3
R545 T657 T660 causeOf Sp1,regulate
R546 T658 T659 causeOf Sp3,regulate
R547 T661 T660 themeOf transcription,regulate
R548 T661 T659 themeOf transcription,regulate
R549 T662 T661 themeOf APOBEC3G,transcription
R550 T663 T666 themeOf APOBEC3G,regulation
R551 T663 T665 themeOf APOBEC3G,expressed
R552 T664 T663 equivalentTo A3G,APOBEC3G
R554 T670 T669 partOf promoter,A3G

bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T678 0-3 Protein denotes Sp1
T679 8-11 Protein denotes Sp3
T680 48-67 Protein denotes human APOBEC3G gene
T681 27-40 Transcription denotes transcription
T682 12-20 Regulation denotes regulate
T683 12-20 Regulation denotes regulate
T684 79-87 Protein denotes APOBEC3G
T685 89-92 Protein denotes A3G
T686 131-166 Protein denotes family of human cytidine deaminases
T687 171-180 Gene_expression denotes expressed
T688 171-180 Gene_expression denotes expressed
T689 419-422 Protein denotes A3G
T690 517-527 Protein denotes Luciferase
T691 720-732 Protein denotes A3G promoter
T12745 0-3 Protein denotes Sp1
T12746 8-11 Protein denotes Sp3
R560 T678 T682 causeOf Sp1,regulate
R561 T679 T683 causeOf Sp3,regulate
R562 T680 T681 themeOf human APOBEC3G gene,transcription
R563 T681 T682 themeOf transcription,regulate
R564 T681 T683 themeOf transcription,regulate
R565 T684 T687 themeOf APOBEC3G,expressed
R566 T685 T688 themeOf A3G,expressed

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T43 0-3 Protein denotes Sp1
T44 8-11 Protein denotes Sp3
T45 12-20 Regulation denotes regulate
T46 12-20 Regulation denotes regulate
T47 27-40 Transcription denotes transcription
T48 54-62 Protein denotes APOBEC3G
T49 79-87 Protein denotes APOBEC3G
T50 89-92 Protein denotes A3G
T51 171-180 Gene_expression denotes expressed
T52 329-339 Regulation denotes regulation
T53 419-422 Protein denotes A3G
T54 517-527 Protein denotes Luciferase
T55 720-723 Protein denotes A3G
T56 724-732 Entity denotes promoter
T11349 0-3 Protein denotes Sp1
T11350 8-11 Protein denotes Sp3
R27 T43 T46 causeOf Sp1,regulate
R28 T44 T45 causeOf Sp3,regulate
R29 T47 T46 themeOf transcription,regulate
R30 T47 T45 themeOf transcription,regulate
R31 T48 T47 themeOf APOBEC3G,transcription
R32 T49 T52 themeOf APOBEC3G,regulation
R33 T49 T51 themeOf APOBEC3G,expressed
R34 T50 T49 equivalentTo A3G,APOBEC3G
R36 T56 T55 partOf promoter,A3G

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T11889 0-3 P08047 denotes Sp1
T11890 8-11 Q02447 denotes Sp3
T295 0-3 P08047 denotes Sp1
T296 8-11 Q02447 denotes Sp3
T297 54-62 Q9HC16 denotes APOBEC3G
T298 79-87 Q9HC16 denotes APOBEC3G
T299 89-92 Q9HC16 denotes A3G
T300 419-422 Q9HC16 denotes A3G
T301 517-527 P08659 denotes Luciferase
T302 572-575 Q9HC16 denotes A3G
T303 612-620 Q04864 denotes relative
T304 720-723 Q9HC16 denotes A3G