PMC:1920263 / 0-154
Annnotations
test2
Id | Subject | Object | Predicate | Lexical cue | Negation |
---|---|---|---|---|---|
T22 | 0-3 | Protein | denotes | Sp1 | |
T23 | 8-11 | Protein | denotes | Sp3 | |
T24 | 12-20 | Regulation | denotes | regulate | |
T25 | 27-40 | Transcription | denotes | transcription | |
T26 | 54-62 | Protein | denotes | APOBEC3G | |
T27 | 79-87 | Protein | denotes | APOBEC3G | true |
T28 | 89-92 | Protein | denotes | A3G | |
T11310 | 0-3 | Protein | denotes | Sp1 | |
T11311 | 8-11 | Protein | denotes | Sp3 | |
R16 | T22 | T24 | causeOf | Sp1,regulate | |
R17 | T23 | T24 | causeOf | Sp3,regulate | |
R18 | T25 | T24 | themeOf | transcription,regulate | |
R19 | T26 | T25 | themeOf | APOBEC3G,transcription | |
R21 | T28 | T27 | equivalentTo | A3G,APOBEC3G |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T73 | 27-40 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
T11409 | 27-40 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T318 | 0-3 | CD | denotes | Sp1 |
T319 | 4-7 | CC | denotes | and |
T320 | 8-11 | JJ | denotes | Sp3 |
T321 | 12-20 | VB | denotes | regulate |
T322 | 21-26 | JJ | denotes | basal |
T323 | 27-40 | NN | denotes | transcription |
T324 | 41-43 | IN | denotes | of |
T325 | 44-47 | DT | denotes | the |
T326 | 48-53 | JJ | denotes | human |
T327 | 54-62 | NNP | denotes | APOBEC3G |
T328 | 63-67 | NN | denotes | gene |
T329 | 79-87 | NNP | denotes | APOBEC3G |
T330 | 88-89 | -LRB- | denotes | ( |
T331 | 89-92 | NNP | denotes | A3G |
T332 | 92-93 | -RRB- | denotes | ) |
T333 | 93-94 | , | denotes | , |
T334 | 95-96 | DT | denotes | a |
T335 | 97-103 | NN | denotes | member |
T336 | 104-106 | IN | denotes | of |
T337 | 107-110 | DT | denotes | the |
T338 | 111-119 | RB | denotes | recently |
T339 | 120-130 | VBN | denotes | discovered |
T340 | 131-137 | NN | denotes | family |
T341 | 138-140 | IN | denotes | of |
T342 | 141-146 | JJ | denotes | human |
T11941 | 0-3 | CD | denotes | Sp1 |
T11942 | 4-7 | CC | denotes | and |
T11943 | 8-11 | JJ | denotes | Sp3 |
T11944 | 27-40 | NN | denotes | transcription |
R267 | T319 | T318 | cc | and,Sp1 |
R268 | T320 | T321 | nsubj | Sp3,regulate |
R269 | T321 | T318 | conj | regulate,Sp1 |
R270 | T322 | T323 | amod | basal,transcription |
R271 | T323 | T321 | dobj | transcription,regulate |
R272 | T324 | T323 | prep | of,transcription |
R273 | T325 | T328 | det | the,gene |
R274 | T326 | T328 | amod | human,gene |
R275 | T327 | T328 | compound | APOBEC3G,gene |
R276 | T328 | T324 | pobj | gene,of |
R277 | T329 | T328 | appos | APOBEC3G,gene |
R278 | T330 | T331 | punct | (,A3G |
R279 | T331 | T329 | appos | A3G,APOBEC3G |
R280 | T332 | T329 | punct | ),APOBEC3G |
R281 | T333 | T328 | punct | ",",gene |
R282 | T334 | T335 | det | a,member |
R283 | T335 | T328 | appos | member,gene |
R284 | T336 | T335 | prep | of,member |
R285 | T337 | T340 | det | the,family |
R286 | T338 | T339 | advmod | recently,discovered |
R287 | T339 | T340 | amod | discovered,family |
R288 | T340 | T336 | pobj | family,of |
R289 | T341 | T340 | prep | of,family |
R9721 | T11942 | T11941 | cc | and,Sp1 |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T64 | 0-67 | Sentence | denotes | Sp1 and Sp3 regulate basal transcription of the human APOBEC3G gene |
T1 | 0-67 | Sentence | denotes | Sp1 and Sp3 regulate basal transcription of the human APOBEC3G gene |
T2 | 70-78 | Sentence | denotes | Abstract |
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T76 | 0-3 | NN | denotes | Sp1 |
T77 | 4-7 | CC | denotes | and |
T78 | 8-11 | NN | denotes | Sp3 |
T79 | 12-20 | VB | denotes | regulate |
T80 | 21-26 | JJ | denotes | basal |
T81 | 27-40 | NN | denotes | transcription |
T82 | 41-43 | IN | denotes | of |
T83 | 44-47 | DT | denotes | the |
T84 | 48-53 | JJ | denotes | human |
T85 | 54-62 | NN | denotes | APOBEC3G |
T86 | 63-67 | NN | denotes | gene |
T87 | 79-87 | NN | denotes | APOBEC3G |
T88 | 88-89 | -LRB- | denotes | ( |
T89 | 89-92 | NN | denotes | A3G |
T90 | 92-93 | -RRB- | denotes | ) |
T91 | 93-94 | -COMMA- | denotes | , |
T92 | 95-96 | DT | denotes | a |
T93 | 97-103 | NN | denotes | member |
T94 | 104-106 | IN | denotes | of |
T95 | 107-110 | DT | denotes | the |
T96 | 111-119 | RB | denotes | recently |
T97 | 120-130 | VB | denotes | discovered |
T98 | 131-137 | NN | denotes | family |
T99 | 138-140 | IN | denotes | of |
T100 | 141-146 | JJ | denotes | human |
T11426 | 0-3 | NN | denotes | Sp1 |
T11427 | 4-7 | CC | denotes | and |
T11428 | 8-11 | NN | denotes | Sp3 |
T11429 | 27-40 | NN | denotes | transcription |
R42 | T76 | T77 | arg1Of | Sp1,and |
R43 | T77 | T79 | arg1Of | and,regulate |
R44 | T78 | T77 | arg2Of | Sp3,and |
R45 | T81 | T79 | arg2Of | transcription,regulate |
R46 | T81 | T80 | arg1Of | transcription,basal |
R47 | T81 | T82 | arg1Of | transcription,of |
R48 | T86 | T82 | arg2Of | gene,of |
R49 | T86 | T83 | arg1Of | gene,the |
R50 | T86 | T84 | arg1Of | gene,human |
R51 | T86 | T85 | arg1Of | gene,APOBEC3G |
R52 | T87 | T88 | arg1Of | APOBEC3G,( |
R53 | T87 | T91 | arg1Of | APOBEC3G,"," |
R61 | T89 | T88 | arg2Of | A3G,( |
R62 | T90 | T88 | arg3Of | ),( |
R63 | T93 | T91 | arg2Of | member,"," |
R64 | T93 | T92 | arg1Of | member,a |
R65 | T93 | T94 | arg1Of | member,of |
R66 | T97 | T96 | arg1Of | discovered,recently |
R67 | T98 | T94 | arg2Of | family,of |
R68 | T98 | T95 | arg1Of | family,the |
R69 | T98 | T97 | arg1Of | family,discovered |
R70 | T98 | T99 | arg1Of | family,of |
R9254 | T11426 | T11427 | arg1Of | Sp1,and |
R9255 | T11428 | T11427 | arg2Of | Sp3,and |
bionlp-st-ge-2016-coref
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T294 | 79-87 | Antecedent | denotes | APOBEC3G |
events-check-again
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T657 | 0-3 | Protein | denotes | Sp1 |
T658 | 8-11 | Protein | denotes | Sp3 |
T659 | 12-20 | Regulation | denotes | regulate |
T660 | 12-20 | Regulation | denotes | regulate |
T661 | 27-40 | Transcription | denotes | transcription |
T662 | 54-62 | Protein | denotes | APOBEC3G |
T663 | 79-87 | Protein | denotes | APOBEC3G |
T664 | 89-92 | Protein | denotes | A3G |
T12702 | 0-3 | Protein | denotes | Sp1 |
T12703 | 8-11 | Protein | denotes | Sp3 |
R545 | T657 | T660 | causeOf | Sp1,regulate |
R546 | T658 | T659 | causeOf | Sp3,regulate |
R547 | T661 | T660 | themeOf | transcription,regulate |
R548 | T661 | T659 | themeOf | transcription,regulate |
R549 | T662 | T661 | themeOf | APOBEC3G,transcription |
R552 | T664 | T663 | equivalentTo | A3G,APOBEC3G |
bionlp-st-ge-2016-reference-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T678 | 0-3 | Protein | denotes | Sp1 |
T679 | 8-11 | Protein | denotes | Sp3 |
T680 | 48-67 | Protein | denotes | human APOBEC3G gene |
T681 | 27-40 | Transcription | denotes | transcription |
T682 | 12-20 | Regulation | denotes | regulate |
T683 | 12-20 | Regulation | denotes | regulate |
T684 | 79-87 | Protein | denotes | APOBEC3G |
T685 | 89-92 | Protein | denotes | A3G |
T12745 | 0-3 | Protein | denotes | Sp1 |
T12746 | 8-11 | Protein | denotes | Sp3 |
R560 | T678 | T682 | causeOf | Sp1,regulate |
R561 | T679 | T683 | causeOf | Sp3,regulate |
R562 | T680 | T681 | themeOf | human APOBEC3G gene,transcription |
R563 | T681 | T682 | themeOf | transcription,regulate |
R564 | T681 | T683 | themeOf | transcription,regulate |
bionlp-st-ge-2016-reference
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T43 | 0-3 | Protein | denotes | Sp1 |
T44 | 8-11 | Protein | denotes | Sp3 |
T45 | 12-20 | Regulation | denotes | regulate |
T46 | 12-20 | Regulation | denotes | regulate |
T47 | 27-40 | Transcription | denotes | transcription |
T48 | 54-62 | Protein | denotes | APOBEC3G |
T49 | 79-87 | Protein | denotes | APOBEC3G |
T50 | 89-92 | Protein | denotes | A3G |
T11349 | 0-3 | Protein | denotes | Sp1 |
T11350 | 8-11 | Protein | denotes | Sp3 |
R27 | T43 | T46 | causeOf | Sp1,regulate |
R28 | T44 | T45 | causeOf | Sp3,regulate |
R29 | T47 | T46 | themeOf | transcription,regulate |
R30 | T47 | T45 | themeOf | transcription,regulate |
R31 | T48 | T47 | themeOf | APOBEC3G,transcription |
R34 | T50 | T49 | equivalentTo | A3G,APOBEC3G |
bionlp-st-ge-2016-uniprot
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T11889 | 0-3 | P08047 | denotes | Sp1 |
T11890 | 8-11 | Q02447 | denotes | Sp3 |
T295 | 0-3 | P08047 | denotes | Sp1 |
T296 | 8-11 | Q02447 | denotes | Sp3 |
T297 | 54-62 | Q9HC16 | denotes | APOBEC3G |
T298 | 79-87 | Q9HC16 | denotes | APOBEC3G |
T299 | 89-92 | Q9HC16 | denotes | A3G |