PMC:1920263 / 0-135
Annnotations
test2
| Id | Subject | Object | Predicate | Lexical cue | Negation |
|---|---|---|---|---|---|
| T22 | 0-3 | Protein | denotes | Sp1 | |
| T23 | 8-11 | Protein | denotes | Sp3 | |
| T24 | 12-20 | Regulation | denotes | regulate | |
| T25 | 27-40 | Transcription | denotes | transcription | |
| T26 | 54-62 | Protein | denotes | APOBEC3G | |
| T27 | 79-87 | Protein | denotes | APOBEC3G | true |
| T28 | 89-92 | Protein | denotes | A3G | |
| T11310 | 0-3 | Protein | denotes | Sp1 | |
| T11311 | 8-11 | Protein | denotes | Sp3 | |
| R16 | T22 | T24 | causeOf | Sp1,regulate | |
| R17 | T23 | T24 | causeOf | Sp3,regulate | |
| R18 | T25 | T24 | themeOf | transcription,regulate | |
| R19 | T26 | T25 | themeOf | APOBEC3G,transcription | |
| R21 | T28 | T27 | equivalentTo | A3G,APOBEC3G |
GO-BP
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T73 | 27-40 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
| T11409 | 27-40 | http://purl.obolibrary.org/obo/GO_0006351 | denotes | transcription |
bionlp-st-ge-2016-spacy-parsed
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T318 | 0-3 | CD | denotes | Sp1 |
| T319 | 4-7 | CC | denotes | and |
| T320 | 8-11 | JJ | denotes | Sp3 |
| T321 | 12-20 | VB | denotes | regulate |
| T322 | 21-26 | JJ | denotes | basal |
| T323 | 27-40 | NN | denotes | transcription |
| T324 | 41-43 | IN | denotes | of |
| T325 | 44-47 | DT | denotes | the |
| T326 | 48-53 | JJ | denotes | human |
| T327 | 54-62 | NNP | denotes | APOBEC3G |
| T328 | 63-67 | NN | denotes | gene |
| T329 | 79-87 | NNP | denotes | APOBEC3G |
| T330 | 88-89 | -LRB- | denotes | ( |
| T331 | 89-92 | NNP | denotes | A3G |
| T332 | 92-93 | -RRB- | denotes | ) |
| T333 | 93-94 | , | denotes | , |
| T334 | 95-96 | DT | denotes | a |
| T335 | 97-103 | NN | denotes | member |
| T336 | 104-106 | IN | denotes | of |
| T337 | 107-110 | DT | denotes | the |
| T338 | 111-119 | RB | denotes | recently |
| T339 | 120-130 | VBN | denotes | discovered |
| T11941 | 0-3 | CD | denotes | Sp1 |
| T11942 | 4-7 | CC | denotes | and |
| T11943 | 8-11 | JJ | denotes | Sp3 |
| T11944 | 27-40 | NN | denotes | transcription |
| R267 | T319 | T318 | cc | and,Sp1 |
| R268 | T320 | T321 | nsubj | Sp3,regulate |
| R269 | T321 | T318 | conj | regulate,Sp1 |
| R270 | T322 | T323 | amod | basal,transcription |
| R271 | T323 | T321 | dobj | transcription,regulate |
| R272 | T324 | T323 | prep | of,transcription |
| R273 | T325 | T328 | det | the,gene |
| R274 | T326 | T328 | amod | human,gene |
| R275 | T327 | T328 | compound | APOBEC3G,gene |
| R276 | T328 | T324 | pobj | gene,of |
| R277 | T329 | T328 | appos | APOBEC3G,gene |
| R278 | T330 | T331 | punct | (,A3G |
| R279 | T331 | T329 | appos | A3G,APOBEC3G |
| R280 | T332 | T329 | punct | ),APOBEC3G |
| R281 | T333 | T328 | punct | ",",gene |
| R282 | T334 | T335 | det | a,member |
| R283 | T335 | T328 | appos | member,gene |
| R284 | T336 | T335 | prep | of,member |
| R286 | T338 | T339 | advmod | recently,discovered |
| R9721 | T11942 | T11941 | cc | and,Sp1 |
sentences
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T64 | 0-67 | Sentence | denotes | Sp1 and Sp3 regulate basal transcription of the human APOBEC3G gene |
| T1 | 0-67 | Sentence | denotes | Sp1 and Sp3 regulate basal transcription of the human APOBEC3G gene |
| T2 | 70-78 | Sentence | denotes | Abstract |
pmc-enju-pas
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T76 | 0-3 | NN | denotes | Sp1 |
| T77 | 4-7 | CC | denotes | and |
| T78 | 8-11 | NN | denotes | Sp3 |
| T79 | 12-20 | VB | denotes | regulate |
| T80 | 21-26 | JJ | denotes | basal |
| T81 | 27-40 | NN | denotes | transcription |
| T82 | 41-43 | IN | denotes | of |
| T83 | 44-47 | DT | denotes | the |
| T84 | 48-53 | JJ | denotes | human |
| T85 | 54-62 | NN | denotes | APOBEC3G |
| T86 | 63-67 | NN | denotes | gene |
| T87 | 79-87 | NN | denotes | APOBEC3G |
| T88 | 88-89 | -LRB- | denotes | ( |
| T89 | 89-92 | NN | denotes | A3G |
| T90 | 92-93 | -RRB- | denotes | ) |
| T91 | 93-94 | -COMMA- | denotes | , |
| T92 | 95-96 | DT | denotes | a |
| T93 | 97-103 | NN | denotes | member |
| T94 | 104-106 | IN | denotes | of |
| T95 | 107-110 | DT | denotes | the |
| T96 | 111-119 | RB | denotes | recently |
| T97 | 120-130 | VB | denotes | discovered |
| T11426 | 0-3 | NN | denotes | Sp1 |
| T11427 | 4-7 | CC | denotes | and |
| T11428 | 8-11 | NN | denotes | Sp3 |
| T11429 | 27-40 | NN | denotes | transcription |
| R42 | T76 | T77 | arg1Of | Sp1,and |
| R43 | T77 | T79 | arg1Of | and,regulate |
| R44 | T78 | T77 | arg2Of | Sp3,and |
| R45 | T81 | T79 | arg2Of | transcription,regulate |
| R46 | T81 | T80 | arg1Of | transcription,basal |
| R47 | T81 | T82 | arg1Of | transcription,of |
| R48 | T86 | T82 | arg2Of | gene,of |
| R49 | T86 | T83 | arg1Of | gene,the |
| R50 | T86 | T84 | arg1Of | gene,human |
| R51 | T86 | T85 | arg1Of | gene,APOBEC3G |
| R52 | T87 | T88 | arg1Of | APOBEC3G,( |
| R53 | T87 | T91 | arg1Of | APOBEC3G,"," |
| R61 | T89 | T88 | arg2Of | A3G,( |
| R62 | T90 | T88 | arg3Of | ),( |
| R63 | T93 | T91 | arg2Of | member,"," |
| R64 | T93 | T92 | arg1Of | member,a |
| R65 | T93 | T94 | arg1Of | member,of |
| R66 | T97 | T96 | arg1Of | discovered,recently |
| R9254 | T11426 | T11427 | arg1Of | Sp1,and |
| R9255 | T11428 | T11427 | arg2Of | Sp3,and |
bionlp-st-ge-2016-coref
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T294 | 79-87 | Antecedent | denotes | APOBEC3G |
events-check-again
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T657 | 0-3 | Protein | denotes | Sp1 |
| T658 | 8-11 | Protein | denotes | Sp3 |
| T659 | 12-20 | Regulation | denotes | regulate |
| T660 | 12-20 | Regulation | denotes | regulate |
| T661 | 27-40 | Transcription | denotes | transcription |
| T662 | 54-62 | Protein | denotes | APOBEC3G |
| T663 | 79-87 | Protein | denotes | APOBEC3G |
| T664 | 89-92 | Protein | denotes | A3G |
| T12702 | 0-3 | Protein | denotes | Sp1 |
| T12703 | 8-11 | Protein | denotes | Sp3 |
| R545 | T657 | T660 | causeOf | Sp1,regulate |
| R546 | T658 | T659 | causeOf | Sp3,regulate |
| R547 | T661 | T660 | themeOf | transcription,regulate |
| R548 | T661 | T659 | themeOf | transcription,regulate |
| R549 | T662 | T661 | themeOf | APOBEC3G,transcription |
| R552 | T664 | T663 | equivalentTo | A3G,APOBEC3G |
bionlp-st-ge-2016-reference-tees
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T678 | 0-3 | Protein | denotes | Sp1 |
| T679 | 8-11 | Protein | denotes | Sp3 |
| T680 | 48-67 | Protein | denotes | human APOBEC3G gene |
| T681 | 27-40 | Transcription | denotes | transcription |
| T682 | 12-20 | Regulation | denotes | regulate |
| T683 | 12-20 | Regulation | denotes | regulate |
| T684 | 79-87 | Protein | denotes | APOBEC3G |
| T685 | 89-92 | Protein | denotes | A3G |
| T12745 | 0-3 | Protein | denotes | Sp1 |
| T12746 | 8-11 | Protein | denotes | Sp3 |
| R560 | T678 | T682 | causeOf | Sp1,regulate |
| R561 | T679 | T683 | causeOf | Sp3,regulate |
| R562 | T680 | T681 | themeOf | human APOBEC3G gene,transcription |
| R563 | T681 | T682 | themeOf | transcription,regulate |
| R564 | T681 | T683 | themeOf | transcription,regulate |
bionlp-st-ge-2016-reference
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T43 | 0-3 | Protein | denotes | Sp1 |
| T44 | 8-11 | Protein | denotes | Sp3 |
| T45 | 12-20 | Regulation | denotes | regulate |
| T46 | 12-20 | Regulation | denotes | regulate |
| T47 | 27-40 | Transcription | denotes | transcription |
| T48 | 54-62 | Protein | denotes | APOBEC3G |
| T49 | 79-87 | Protein | denotes | APOBEC3G |
| T50 | 89-92 | Protein | denotes | A3G |
| T11349 | 0-3 | Protein | denotes | Sp1 |
| T11350 | 8-11 | Protein | denotes | Sp3 |
| R27 | T43 | T46 | causeOf | Sp1,regulate |
| R28 | T44 | T45 | causeOf | Sp3,regulate |
| R29 | T47 | T46 | themeOf | transcription,regulate |
| R30 | T47 | T45 | themeOf | transcription,regulate |
| R31 | T48 | T47 | themeOf | APOBEC3G,transcription |
| R34 | T50 | T49 | equivalentTo | A3G,APOBEC3G |
bionlp-st-ge-2016-uniprot
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T11889 | 0-3 | P08047 | denotes | Sp1 |
| T11890 | 8-11 | Q02447 | denotes | Sp3 |
| T295 | 0-3 | P08047 | denotes | Sp1 |
| T296 | 8-11 | Q02447 | denotes | Sp3 |
| T297 | 54-62 | Q9HC16 | denotes | APOBEC3G |
| T298 | 79-87 | Q9HC16 | denotes | APOBEC3G |
| T299 | 89-92 | Q9HC16 | denotes | A3G |