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Id Subject Object Predicate Lexical cue
T29766 599-601 , denotes ,
T29767 601-604 CC denotes and
T29768 605-607 NN denotes Rb
T29662 107-109 , denotes ,
T29663 109-117 VBN denotes embedded
T29664 118-120 IN denotes in
T29665 121-124 NN denotes OCT
T29666 125-126 -LRB- denotes (
T29667 126-135 NNP denotes TissueTek
T29641 0-9 NN denotes Histology
T29642 9-11 , denotes ,
T29643 11-29 NN denotes immunofluorescence
T29644 29-31 , denotes ,
T29645 31-34 CC denotes and
T29646 35-47 NNS denotes measurements
T29647 47-48 . denotes .
T29648 48-275 sentence denotes Eyeballs were fixed in 4% paraformaldehyde for 1 h at 4 °C, embedded in OCT (TissueTek 4583, Sakura, http://www.sakuraeu.com), frozen on dry ice, and cut into 12-μm sections on Superfrost plus slides (VWR, http://www.vwr.com).
T29649 49-57 NNS denotes Eyeballs
T29650 63-68 VBN denotes fixed
T29651 58-62 VBD denotes were
T29652 69-71 IN denotes in
T29653 72-73 CD denotes 4
T29654 73-74 NN denotes %
T29655 75-91 NN denotes paraformaldehyde
T29656 92-95 IN denotes for
T29657 96-97 CD denotes 1
T29658 98-99 NN denotes h
T29659 100-102 IN denotes at
T29660 103-104 CD denotes 4
T29661 105-107 NN denotes °C
T29668 136-140 CD denotes 4583
T29669 140-142 , denotes ,
T29670 142-148 NNP denotes Sakura
T29671 148-150 , denotes ,
T29672 150-173 NN denotes http://www.sakuraeu.com
T29673 173-174 -RRB- denotes )
T29674 174-176 , denotes ,
T29675 176-182 VBN denotes frozen
T29676 183-185 IN denotes on
T29677 186-189 JJ denotes dry
T29678 190-193 NN denotes ice
T29679 193-195 , denotes ,
T29680 195-198 CC denotes and
T29681 199-202 VBN denotes cut
T29682 203-207 IN denotes into
T29683 208-210 CD denotes 12
T29684 211-213 NN denotes μm
T29685 210-211 HYPH denotes -
T29686 214-222 NNS denotes sections
T29687 223-225 IN denotes on
T29688 226-236 NNP denotes Superfrost
T29689 242-248 NNS denotes slides
T29690 237-241 CC denotes plus
T29691 249-250 -LRB- denotes (
T29692 250-253 NN denotes VWR
T29693 253-255 , denotes ,
T29694 255-273 NN denotes http://www.vwr.com
T29695 273-274 -RRB- denotes )
T29696 274-275 . denotes .
T29697 275-383 sentence denotes For S-phase analysis, BrdU (100 μg/g of body weight) was injected intraperitoneally 2 h prior to sacrifice.
T29698 276-279 IN denotes For
T29699 333-341 VBN denotes injected
T29700 280-281 NN denotes S
T29701 282-287 NN denotes phase
T29702 281-282 HYPH denotes -
T29703 288-296 NN denotes analysis
T29704 296-298 , denotes ,
T29705 298-302 NN denotes BrdU
T29706 303-304 -LRB- denotes (
T29707 304-307 CD denotes 100
T29708 308-310 NN denotes μg
T29709 310-311 SYM denotes /
T29710 311-312 NN denotes g
T29711 313-315 IN denotes of
T29712 316-320 NN denotes body
T29713 321-327 NN denotes weight
T29714 327-328 -RRB- denotes )
T29715 329-332 VBD denotes was
T29716 342-359 RB denotes intraperitoneally
T29717 360-361 CD denotes 2
T29718 362-363 NN denotes h
T29719 370-372 IN denotes to
T29720 364-369 JJ denotes prior
T29721 373-382 NN denotes sacrifice
T29722 382-383 . denotes .
T29723 383-535 sentence denotes BrdU+ cells were detected using a biotin-conjugated sheep polyclonal antibody (1:500, Maine Biotechnology Services, http://www.mainebiotechnology.com).
T29724 384-388 NN denotes BrdU
T29725 390-395 NNS denotes cells
T29726 388-389 SYM denotes +
T29727 401-409 VBN denotes detected
T29728 396-400 VBD denotes were
T29729 410-415 VBG denotes using
T29730 416-417 DT denotes a
T29731 453-461 NN denotes antibody
T29732 418-424 NN denotes biotin
T29733 425-435 VBN denotes conjugated
T29734 424-425 HYPH denotes -
T29735 436-441 NN denotes sheep
T29736 442-452 JJ denotes polyclonal
T29737 462-463 -LRB- denotes (
T29738 490-498 NNPS denotes Services
T29739 463-464 CD denotes 1
T29740 464-465 SYM denotes :
T29741 465-468 CD denotes 500
T29742 468-470 , denotes ,
T29743 470-475 NNP denotes Maine
T29744 476-489 NNP denotes Biotechnology
T29745 498-500 , denotes ,
T29746 500-533 NN denotes http://www.mainebiotechnology.com
T29747 533-534 -RRB- denotes )
T29748 534-535 . denotes .
T29749 535-583 sentence denotes All other antibodies are described in Table S1.
T29750 536-539 DT denotes All
T29751 546-556 NNS denotes antibodies
T29752 540-545 JJ denotes other
T29753 561-570 VBN denotes described
T29754 557-560 VBP denotes are
T29755 571-573 IN denotes in
T29756 574-579 NN denotes Table
T29757 580-582 NN denotes S1
T29758 582-583 . denotes .
T29759 583-754 sentence denotes For E2f3, Mki67, and Rb staining, antigen retrieval was performed by boiling sections in citric acid solution for 15 min according to Ino [50], except on frozen sections.
T29760 584-587 IN denotes For
T29761 640-649 VBN denotes performed
T29762 588-592 NN denotes E2f3
T29763 608-616 NN denotes staining
T29764 592-594 , denotes ,
T29765 594-599 NN denotes Mki67
T29769 616-618 , denotes ,
T29770 618-625 NN denotes antigen
T29771 626-635 NN denotes retrieval
T29772 636-639 VBD denotes was
T29773 650-652 IN denotes by
T29774 653-660 VBG denotes boiling
T29775 661-669 NNS denotes sections
T29776 670-672 IN denotes in
T29777 673-679 JJ denotes citric
T29778 680-684 NN denotes acid
T29779 685-693 NN denotes solution
T29780 694-697 IN denotes for
T29781 698-700 CD denotes 15
T29782 701-704 NN denotes min
T29783 705-714 VBG denotes according
T29784 715-717 IN denotes to
T29785 718-721 NNP denotes Ino
T29786 722-723 -LRB- denotes [
T29787 723-725 CD denotes 50
T29788 725-726 -RRB- denotes ]
T29789 726-728 , denotes ,
T29790 728-734 IN denotes except
T29791 735-737 IN denotes on
T29792 738-744 VBN denotes frozen
T29793 745-753 NNS denotes sections
T29794 753-754 . denotes .
T29795 754-793 sentence denotes TUNEL was performed as described [13].
T29796 755-760 NN denotes TUNEL
T29797 765-774 VBN denotes performed
T29798 761-764 VBD denotes was
T29799 775-777 IN denotes as
T29800 778-787 VBN denotes described
T29801 788-789 -LRB- denotes [
T29802 789-791 CD denotes 13
T29803 791-792 -RRB- denotes ]
T29804 792-793 . denotes .
T29805 793-1064 sentence denotes Briefly, sections were incubated for 1 h at 37 °C with 75 μl of mixture solution consisting of 0.5 μl of terminal deoxynucleotide transferase, 1 μl of biotin-16-dUTP, 7.5 μl of CoCl2, 15 μl of 5× terminal deoxynucleotide transferase buffer, and 51 μl of distilled water.
T29806 794-801 RB denotes Briefly
T29807 817-826 VBN denotes incubated
T29808 801-803 , denotes ,
T29809 803-811 NNS denotes sections
T29810 812-816 VBD denotes were
T29811 827-830 IN denotes for
T29812 831-832 CD denotes 1
T29813 833-834 NN denotes h
T29814 835-837 IN denotes at
T29815 838-840 CD denotes 37
T29816 841-843 NN denotes °C
T29817 844-848 IN denotes with
T29818 849-851 CD denotes 75
T29819 852-854 NN denotes μl
T29820 855-857 IN denotes of
T29821 858-865 NN denotes mixture
T29822 866-874 NN denotes solution
T29823 875-885 VBG denotes consisting
T29824 886-888 IN denotes of
T29825 889-892 CD denotes 0.5
T29826 893-895 NN denotes μl
T29827 896-898 IN denotes of
T29828 899-907 JJ denotes terminal
T29829 924-935 NN denotes transferase
T29830 908-923 NN denotes deoxynucleotide
T29831 935-937 , denotes ,
T29832 937-938 CD denotes 1
T29833 939-941 NN denotes μl
T29834 942-944 IN denotes of
T29835 945-951 NN denotes biotin
T29836 955-959 NN denotes dUTP
T29837 951-952 HYPH denotes -
T29838 952-954 CD denotes 16
T29839 954-955 HYPH denotes -
T29840 959-961 , denotes ,
T29841 961-964 CD denotes 7.5
T29842 965-967 NN denotes μl
T29843 968-970 IN denotes of
T29844 971-976 NN denotes CoCl2
T29845 976-978 , denotes ,
T29846 978-980 CD denotes 15
T29847 981-983 NN denotes μl
T29848 984-986 IN denotes of
T29849 987-988 CD denotes 5
T29850 1027-1033 NN denotes buffer
T29851 988-989 SYM denotes ×
T29852 990-998 JJ denotes terminal
T29853 1015-1026 NN denotes transferase
T29854 999-1014 NN denotes deoxynucleotide
T29855 1033-1035 , denotes ,
T29856 1035-1038 CC denotes and
T29857 1039-1041 CD denotes 51
T29858 1042-1044 NN denotes μl
T29859 1045-1047 IN denotes of
T29860 1048-1057 VBN denotes distilled
T29861 1058-1063 NN denotes water
T29862 1063-1064 . denotes .
T29863 1064-1254 sentence denotes After three washes in 4× SSC buffer, sections were incubated with Alexa 488– or Alexa 568−streptavidin (1:1,000; Molecular Probes, http://probes.invitrogen.com) for 1 h at room temperature.
T29864 1065-1070 IN denotes After
T29865 1116-1125 VBN denotes incubated
T29866 1071-1076 CD denotes three
T29867 1077-1083 NNS denotes washes
T29868 1084-1086 IN denotes in
T29869 1087-1088 CD denotes 4
T29870 1094-1100 NN denotes buffer
T29871 1088-1089 SYM denotes ×
T29872 1090-1093 NN denotes SSC
T29873 1100-1102 , denotes ,
T29874 1102-1110 NNS denotes sections
T29875 1111-1115 VBD denotes were
T29876 1126-1130 IN denotes with
T29877 1131-1136 NNP denotes Alexa
T29878 1155-1167 NN denotes streptavidin
T29879 1137-1140 CD denotes 488
T29880 1140-1141 HYPH denotes –
T29881 1142-1144 CC denotes or
T29882 1145-1150 NNP denotes Alexa
T29883 1151-1154 CD denotes 568
T29884 1154-1155 HYPH denotes −
T29885 1168-1169 -LRB- denotes (
T29886 1188-1194 NNP denotes Probes
T29887 1169-1170 CD denotes 1
T29888 1170-1171 SYM denotes :
T29889 1171-1176 CD denotes 1,000
T29890 1176-1177 : denotes ;
T29891 1178-1187 NNP denotes Molecular
T29892 1194-1196 , denotes ,
T29893 1196-1224 NN denotes http://probes.invitrogen.com
T29894 1224-1225 -RRB- denotes )
T29895 1226-1229 IN denotes for
T29896 1230-1231 CD denotes 1
T29897 1232-1233 NN denotes h
T29898 1234-1236 IN denotes at
T29899 1237-1241 NN denotes room
T29900 1242-1253 NN denotes temperature
T29901 1253-1254 . denotes .
T29902 1254-1508 sentence denotes Primary antibodies or labelled cells were visualized using donkey anti-mouse Alexa 488 or Alexa 568, donkey anti-rabbit Alexa 488 or Alexa 568, donkey anti-goat Alexa 488 or Alexa 568, and streptavidin Alexa 488 or Alexa 568 (1:1,000; Molecular Probes).
T29903 1255-1262 JJ denotes Primary
T29904 1263-1273 NNS denotes antibodies
T29905 1297-1307 VBN denotes visualized
T29906 1274-1276 CC denotes or
T29907 1277-1285 VBN denotes labelled
T29908 1286-1291 NNS denotes cells
T29909 1292-1296 VBD denotes were
T29910 1308-1313 VBG denotes using
T29911 1314-1320 NN denotes donkey
T29912 1332-1337 NNP denotes Alexa
T29913 1321-1331 JJ denotes anti-mouse
T29914 1338-1341 CD denotes 488
T29915 1342-1344 CC denotes or
T29916 1345-1350 NNP denotes Alexa
T29917 1351-1354 CD denotes 568
T29918 1354-1356 , denotes ,
T29919 1356-1362 NN denotes donkey
T29920 1375-1380 NNP denotes Alexa
T29921 1363-1374 JJ denotes anti-rabbit
T29922 1381-1384 CD denotes 488
T29923 1385-1387 CC denotes or
T29924 1388-1393 NNP denotes Alexa
T29925 1394-1397 CD denotes 568
T29926 1397-1399 , denotes ,
T29927 1399-1405 NN denotes donkey
T29928 1416-1421 NNP denotes Alexa
T29929 1406-1415 JJ denotes anti-goat
T29930 1422-1425 CD denotes 488
T29931 1426-1428 CC denotes or
T29932 1429-1434 NNP denotes Alexa
T29933 1435-1438 CD denotes 568
T29934 1438-1440 , denotes ,
T29935 1440-1443 CC denotes and
T29936 1444-1456 NN denotes streptavidin
T29937 1457-1462 NNP denotes Alexa
T29938 1463-1466 CD denotes 488
T29939 1467-1469 CC denotes or
T29940 1470-1475 NNP denotes Alexa
T29941 1476-1479 CD denotes 568
T29942 1480-1481 -LRB- denotes (
T29943 1500-1506 NNP denotes Probes
T29944 1481-1482 CD denotes 1
T29945 1482-1483 SYM denotes :
T29946 1483-1488 CD denotes 1,000
T29947 1488-1489 : denotes ;
T29948 1490-1499 NNP denotes Molecular
T29949 1506-1507 -RRB- denotes )
T29950 1507-1508 . denotes .
T29951 1508-1613 sentence denotes Nuclei were counter-stained with 4,6-diamidino-2-phenyindole (DAPI; Sigma, http://www.sigmaaldrich.com).
T29952 1509-1515 NNS denotes Nuclei
T29953 1529-1536 VBN denotes stained
T29954 1516-1520 VBD denotes were
T29955 1521-1528 RB denotes counter
T29956 1528-1529 HYPH denotes -
T29957 1537-1541 IN denotes with
T29958 1542-1543 CD denotes 4
T29959 1546-1555 NN denotes diamidino
T29960 1543-1544 , denotes ,
T29961 1544-1545 CD denotes 6
T29962 1545-1546 HYPH denotes -
T29963 1558-1569 NN denotes phenyindole
T29964 1555-1556 HYPH denotes -
T29965 1556-1557 CD denotes 2
T29966 1557-1558 HYPH denotes -
T29967 1570-1571 -LRB- denotes (
T29968 1571-1575 NN denotes DAPI
T29969 1575-1576 : denotes ;
T29970 1577-1582 NN denotes Sigma
T29971 1582-1584 , denotes ,
T29972 1584-1611 NN denotes http://www.sigmaaldrich.com
T29973 1611-1612 -RRB- denotes )
T29974 1612-1613 . denotes .
T29975 1613-1783 sentence denotes Labelled cells were visualized using a Zeiss (http://www.zeiss.com) Axioplan-2 microscope with Plan Neofluar objectives and images captured with a Zeiss AxionCam camera.
T29976 1614-1622 VBN denotes Labelled
T29977 1623-1628 NNS denotes cells
T29978 1634-1644 VBN denotes visualized
T29979 1629-1633 VBD denotes were
T29980 1645-1650 VBG denotes using
T29981 1651-1652 DT denotes a
T29982 1693-1703 NN denotes microscope
T29983 1653-1658 NNP denotes Zeiss
T29984 1659-1660 -LRB- denotes (
T29985 1660-1680 NN denotes http://www.zeiss.com
T29986 1680-1681 -RRB- denotes )
T29987 1682-1690 NN denotes Axioplan
T29988 1690-1691 HYPH denotes -
T29989 1691-1692 CD denotes 2
T29990 1704-1708 IN denotes with
T29991 1709-1713 NNP denotes Plan
T29992 1714-1722 NNP denotes Neofluar
T29993 1723-1733 NNS denotes objectives
T29994 1734-1737 CC denotes and
T29995 1738-1744 NNS denotes images
T29996 1745-1753 VBN denotes captured
T29997 1754-1758 IN denotes with
T29998 1759-1760 DT denotes a
T29999 1776-1782 NN denotes camera
T30000 1761-1766 NNP denotes Zeiss
T30001 1767-1775 NNP denotes AxionCam
T30002 1782-1783 . denotes .
T30003 1783-1890 sentence denotes For double-labelled samples, confocal images were obtained with a Zeiss LSM 5.0 laser scanning microscope.
T30004 1784-1787 IN denotes For
T30005 1834-1842 VBN denotes obtained
T30006 1788-1794 JJ denotes double
T30007 1795-1803 VBN denotes labelled
T30008 1794-1795 HYPH denotes -
T30009 1804-1811 NNS denotes samples
T30010 1811-1813 , denotes ,
T30011 1813-1821 JJ denotes confocal
T30012 1822-1828 NNS denotes images
T30013 1829-1833 VBD denotes were
T30014 1843-1847 IN denotes with
T30015 1848-1849 DT denotes a
T30016 1879-1889 NN denotes microscope
T30017 1850-1855 NNP denotes Zeiss
T30018 1856-1859 NNP denotes LSM
T30019 1860-1863 CD denotes 5.0
T30020 1864-1869 NN denotes laser
T30021 1870-1878 NN denotes scanning
T30022 1889-1890 . denotes .
T30023 1890-2041 sentence denotes The retina was separated into three bins by dividing the ventricular edge of the retina into equal parts and extending a line to the vitreal edge [2].
T30024 1891-1894 DT denotes The
T30025 1895-1901 NN denotes retina
T30026 1906-1915 VBN denotes separated
T30027 1902-1905 VBD denotes was
T30028 1916-1920 IN denotes into
T30029 1921-1926 CD denotes three
T30030 1927-1931 NNS denotes bins
T30031 1932-1934 IN denotes by
T30032 1935-1943 VBG denotes dividing
T30033 1944-1947 DT denotes the
T30034 1960-1964 NN denotes edge
T30035 1948-1959 JJ denotes ventricular
T30036 1965-1967 IN denotes of
T30037 1968-1971 DT denotes the
T30038 1972-1978 NN denotes retina
T30039 1979-1983 IN denotes into
T30040 1984-1989 JJ denotes equal
T30041 1990-1995 NNS denotes parts
T30042 1996-1999 CC denotes and
T30043 2000-2009 VBG denotes extending
T30044 2010-2011 DT denotes a
T30045 2012-2016 NN denotes line
T30046 2017-2019 IN denotes to
T30047 2020-2023 DT denotes the
T30048 2032-2036 NN denotes edge
T30049 2024-2031 JJ denotes vitreal
T30050 2037-2038 -LRB- denotes [
T30051 2038-2039 CD denotes 2
T30052 2039-2040 -RRB- denotes ]
T30053 2040-2041 . denotes .
T30054 2041-2199 sentence denotes Bin 1 contains only cells that expressed Cre as progenitors; bin 3 is at central retina and contains cells derived from progenitors that did not express Cre.
T30055 2042-2045 NN denotes Bin
T30056 2048-2056 VBZ denotes contains
T30057 2046-2047 CD denotes 1
T30058 2109-2111 VBZ denotes is
T30059 2057-2061 JJ denotes only
T30060 2062-2067 NNS denotes cells
T30061 2068-2072 WDT denotes that
T30062 2073-2082 VBD denotes expressed
T30063 2083-2086 NN denotes Cre
T30064 2087-2089 IN denotes as
T30065 2090-2101 NNS denotes progenitors
T30066 2101-2102 : denotes ;
T30067 2103-2106 NN denotes bin
T30068 2107-2108 CD denotes 3
T30069 2112-2114 IN denotes at
T30070 2115-2122 JJ denotes central
T30071 2123-2129 NN denotes retina
T30072 2130-2133 CC denotes and
T30073 2134-2142 VBZ denotes contains
T30074 2143-2148 NNS denotes cells
T30075 2149-2156 VBN denotes derived
T30076 2157-2161 IN denotes from
T30077 2162-2173 NNS denotes progenitors
T30078 2174-2178 WDT denotes that
T30079 2187-2194 VB denotes express
T30080 2179-2182 VBD denotes did
T30081 2183-2186 RB denotes not
T30082 2195-2198 NN denotes Cre
T30083 2198-2199 . denotes .
T30084 2199-2318 sentence denotes For cell counts or thickness measurement we used a region 0–100 μm peripheral to the boundary separating bins 1 and 2.
T30085 2200-2203 IN denotes For
T30086 2244-2248 VBD denotes used
T30087 2204-2208 NN denotes cell
T30088 2209-2215 NNS denotes counts
T30089 2216-2218 CC denotes or
T30090 2219-2228 NN denotes thickness
T30091 2229-2240 NN denotes measurement
T30092 2241-2243 PRP denotes we
T30093 2249-2250 DT denotes a
T30094 2251-2257 NN denotes region
T30095 2258-2259 CD denotes 0
T30096 2260-2263 CD denotes 100
T30097 2259-2260 SYM denotes –
T30098 2264-2266 NN denotes μm
T30099 2267-2277 JJ denotes peripheral
T30100 2278-2280 IN denotes to
T30101 2281-2284 DT denotes the
T30102 2285-2293 NN denotes boundary
T30103 2294-2304 VBG denotes separating
T30104 2305-2309 NNS denotes bins
T30105 2310-2311 CD denotes 1
T30106 2312-2315 CC denotes and
T30107 2316-2317 CD denotes 2
T30108 2317-2318 . denotes .
T30109 2318-2400 sentence denotes Measurements were performed on an Axioplan-2 microscope using Axiovison software.
T30110 2319-2331 NNS denotes Measurements
T30111 2337-2346 VBN denotes performed
T30112 2332-2336 VBD denotes were
T30113 2347-2349 IN denotes on
T30114 2350-2352 DT denotes an
T30115 2364-2374 NN denotes microscope
T30116 2353-2361 NN denotes Axioplan
T30117 2361-2362 HYPH denotes -
T30118 2362-2363 CD denotes 2
T30119 2375-2380 VBG denotes using
T30120 2381-2390 NNP denotes Axiovison
T30121 2391-2399 NN denotes software
T30122 2399-2400 . denotes .
T30123 2400-2524 sentence denotes Quantification of S-phase, M-phase, and apoptotic cells was performed on horizontal sections that included the optic nerve.
T30124 2401-2415 NN denotes Quantification
T30125 2461-2470 VBN denotes performed
T30126 2416-2418 IN denotes of
T30127 2419-2420 NN denotes S
T30128 2421-2426 NN denotes phase
T30129 2420-2421 HYPH denotes -
T30130 2451-2456 NNS denotes cells
T30131 2426-2428 , denotes ,
T30132 2428-2429 NN denotes M
T30133 2430-2435 NN denotes phase
T30134 2429-2430 HYPH denotes -
T30135 2435-2437 , denotes ,
T30136 2437-2440 CC denotes and
T30137 2441-2450 JJ denotes apoptotic
T30138 2457-2460 VBD denotes was
T30139 2471-2473 IN denotes on
T30140 2474-2484 JJ denotes horizontal
T30141 2485-2493 NNS denotes sections
T30142 2494-2498 WDT denotes that
T30143 2499-2507 VBD denotes included
T30144 2508-2511 DT denotes the
T30145 2518-2523 NN denotes nerve
T30146 2512-2517 JJ denotes optic
T30147 2523-2524 . denotes .
T30148 2524-2649 sentence denotes Quantification of differentiated cell types was performed using horizontal sections at equal distances from the optic nerve.
T30149 2525-2539 NN denotes Quantification
T30150 2573-2582 VBN denotes performed
T30151 2540-2542 IN denotes of
T30152 2543-2557 VBN denotes differentiated
T30153 2563-2568 NNS denotes types
T30154 2558-2562 NN denotes cell
T30155 2569-2572 VBD denotes was
T30156 2583-2588 VBG denotes using
T30157 2589-2599 JJ denotes horizontal
T30158 2600-2608 NNS denotes sections
T30159 2609-2611 IN denotes at
T30160 2612-2617 JJ denotes equal
T30161 2618-2627 NNS denotes distances
T30162 2628-2632 IN denotes from
T30163 2633-2636 DT denotes the
T30164 2643-2648 NN denotes nerve
T30165 2637-2642 JJ denotes optic
T30166 2648-2649 . denotes .
T30167 2649-2737 sentence denotes A minimum of three sections per eye and three eyes from different litters were counted.
T30168 2650-2651 DT denotes A
T30169 2652-2659 NN denotes minimum
T30170 2729-2736 VBN denotes counted
T30171 2660-2662 IN denotes of
T30172 2663-2668 CD denotes three
T30173 2669-2677 NNS denotes sections
T30174 2678-2681 IN denotes per
T30175 2682-2685 NN denotes eye
T30176 2686-2689 CC denotes and
T30177 2690-2695 CD denotes three
T30178 2696-2700 NNS denotes eyes
T30179 2701-2705 IN denotes from
T30180 2706-2715 JJ denotes different
T30181 2716-2723 NNS denotes litters
T30182 2724-2728 VBD denotes were
T30183 2736-2737 . denotes .
R8628 T29642 T29641 punct ", ",Histology
R8629 T29643 T29641 conj immunofluorescence,Histology
R8630 T29644 T29643 punct ", ",immunofluorescence
R8631 T29645 T29643 cc and,immunofluorescence
R8632 T29646 T29643 conj measurements,immunofluorescence
R8633 T29647 T29646 punct .,measurements
R8634 T29649 T29650 nsubjpass Eyeballs,fixed
R8635 T29651 T29650 auxpass were,fixed
R8636 T29652 T29650 prep in,fixed
R8637 T29653 T29654 nummod 4,%
R8638 T29654 T29655 compound %,paraformaldehyde
R8639 T29655 T29652 pobj paraformaldehyde,in
R8640 T29656 T29650 prep for,fixed
R8641 T29657 T29658 nummod 1,h
R8642 T29658 T29656 pobj h,for
R8643 T29659 T29650 prep at,fixed
R8644 T29660 T29661 nummod 4,°C
R8645 T29661 T29659 pobj °C,at
R8646 T29662 T29650 punct ", ",fixed
R8647 T29663 T29650 conj embedded,fixed
R8648 T29664 T29663 prep in,embedded
R8649 T29665 T29664 pobj OCT,in
R8650 T29666 T29665 punct (,OCT
R8651 T29667 T29665 appos TissueTek,OCT
R8652 T29668 T29667 nummod 4583,TissueTek
R8653 T29669 T29670 punct ", ",Sakura
R8654 T29670 T29665 parataxis Sakura,OCT
R8655 T29671 T29670 punct ", ",Sakura
R8656 T29672 T29670 npadvmod http://www.sakuraeu.com,Sakura
R8657 T29673 T29670 punct ),Sakura
R8658 T29674 T29663 punct ", ",embedded
R8659 T29675 T29663 conj frozen,embedded
R8660 T29676 T29675 prep on,frozen
R8661 T29677 T29678 amod dry,ice
R8662 T29678 T29676 pobj ice,on
R8663 T29679 T29675 punct ", ",frozen
R8664 T29680 T29675 cc and,frozen
R8665 T29681 T29675 conj cut,frozen
R8666 T29682 T29681 prep into,cut
R8667 T29683 T29684 nummod 12,μm
R8668 T29684 T29686 compound μm,sections
R8669 T29685 T29684 punct -,μm
R8670 T29686 T29682 pobj sections,into
R8671 T29687 T29686 prep on,sections
R8672 T29688 T29689 nmod Superfrost,slides
R8673 T29689 T29687 pobj slides,on
R8674 T29690 T29688 cc plus,Superfrost
R8675 T29691 T29692 punct (,VWR
R8676 T29692 T29689 parataxis VWR,slides
R8677 T29693 T29692 punct ", ",VWR
R8678 T29694 T29692 npadvmod http://www.vwr.com,VWR
R8679 T29695 T29692 punct ),VWR
R8680 T29696 T29650 punct .,fixed
R8681 T29698 T29699 prep For,injected
R8682 T29700 T29701 compound S,phase
R8683 T29701 T29703 compound phase,analysis
R8684 T29702 T29701 punct -,phase
R8685 T29703 T29698 pobj analysis,For
R8686 T29704 T29699 punct ", ",injected
R8687 T29705 T29699 nsubjpass BrdU,injected
R8688 T29706 T29705 punct (,BrdU
R8689 T29707 T29708 nummod 100,μg
R8690 T29708 T29705 npadvmod μg,BrdU
R8691 T29709 T29710 punct /,g
R8692 T29710 T29708 prep g,μg
R8693 T29711 T29710 prep of,g
R8694 T29712 T29713 compound body,weight
R8695 T29713 T29711 pobj weight,of
R8696 T29714 T29699 punct ),injected
R8697 T29715 T29699 auxpass was,injected
R8698 T29716 T29699 advmod intraperitoneally,injected
R8699 T29717 T29718 nummod 2,h
R8700 T29718 T29719 npadvmod h,to
R8701 T29719 T29699 prep to,injected
R8702 T29720 T29719 amod prior,to
R8703 T29721 T29719 pobj sacrifice,to
R8704 T29722 T29699 punct .,injected
R8705 T29724 T29725 nmod BrdU,cells
R8706 T29725 T29727 nsubjpass cells,detected
R8707 T29726 T29724 punct +,BrdU
R8708 T29728 T29727 auxpass were,detected
R8709 T29729 T29727 advcl using,detected
R8710 T29730 T29731 det a,antibody
R8711 T29731 T29729 dobj antibody,using
R8712 T29732 T29733 npadvmod biotin,conjugated
R8713 T29733 T29731 amod conjugated,antibody
R8714 T29734 T29733 punct -,conjugated
R8715 T29735 T29731 nmod sheep,antibody
R8716 T29736 T29731 amod polyclonal,antibody
R8717 T29737 T29738 punct (,Services
R8718 T29738 T29729 parataxis Services,using
R8719 T29739 T29738 dep 1,Services
R8720 T29740 T29741 punct :,500
R8721 T29741 T29739 prep 500,1
R8722 T29742 T29738 punct ", ",Services
R8723 T29743 T29738 compound Maine,Services
R8724 T29744 T29738 compound Biotechnology,Services
R8725 T29745 T29738 punct ", ",Services
R8726 T29746 T29738 npadvmod http://www.mainebiotechnology.com,Services
R8727 T29747 T29738 punct ),Services
R8728 T29748 T29727 punct .,detected
R8729 T29750 T29751 det All,antibodies
R8730 T29751 T29753 nsubjpass antibodies,described
R8731 T29752 T29751 amod other,antibodies
R8732 T29754 T29753 auxpass are,described
R8733 T29755 T29753 prep in,described
R8734 T29756 T29757 compound Table,S1
R8735 T29757 T29755 pobj S1,in
R8736 T29758 T29753 punct .,described
R8737 T29760 T29761 prep For,performed
R8738 T29762 T29763 nmod E2f3,staining
R8739 T29763 T29760 pobj staining,For
R8740 T29764 T29762 punct ", ",E2f3
R8741 T29765 T29762 conj Mki67,E2f3
R8742 T29766 T29765 punct ", ",Mki67
R8743 T29767 T29765 cc and,Mki67
R8744 T29768 T29765 conj Rb,Mki67
R8745 T29769 T29761 punct ", ",performed
R8746 T29770 T29771 compound antigen,retrieval
R8747 T29771 T29761 nsubjpass retrieval,performed
R8748 T29772 T29761 auxpass was,performed
R8749 T29773 T29761 prep by,performed
R8750 T29774 T29773 pcomp boiling,by
R8751 T29775 T29774 dobj sections,boiling
R8752 T29776 T29774 prep in,boiling
R8753 T29777 T29778 amod citric,acid
R8754 T29778 T29779 compound acid,solution
R8755 T29779 T29776 pobj solution,in
R8756 T29780 T29774 prep for,boiling
R8757 T29781 T29782 nummod 15,min
R8758 T29782 T29780 pobj min,for
R8759 T29783 T29774 prep according,boiling
R8760 T29784 T29783 prep to,according
R8761 T29785 T29784 pobj Ino,to
R8762 T29786 T29787 punct [,50
R8763 T29787 T29785 parataxis 50,Ino
R8764 T29788 T29787 punct ],50
R8765 T29789 T29774 punct ", ",boiling
R8766 T29790 T29774 prep except,boiling
R8767 T29791 T29790 prep on,except
R8768 T29792 T29793 amod frozen,sections
R8769 T29793 T29791 pobj sections,on
R8770 T29794 T29761 punct .,performed
R8771 T29796 T29797 nsubjpass TUNEL,performed
R8772 T29798 T29797 auxpass was,performed
R8773 T29799 T29800 mark as,described
R8774 T29800 T29797 advcl described,performed
R8775 T29801 T29802 punct [,13
R8776 T29802 T29800 parataxis 13,described
R8777 T29803 T29802 punct ],13
R8778 T29804 T29797 punct .,performed
R8779 T29806 T29807 advmod Briefly,incubated
R8780 T29808 T29807 punct ", ",incubated
R8781 T29809 T29807 nsubjpass sections,incubated
R8782 T29810 T29807 auxpass were,incubated
R8783 T29811 T29807 prep for,incubated
R8784 T29812 T29813 nummod 1,h
R8785 T29813 T29811 pobj h,for
R8786 T29814 T29807 prep at,incubated
R8787 T29815 T29816 nummod 37,°C
R8788 T29816 T29814 pobj °C,at
R8789 T29817 T29807 prep with,incubated
R8790 T29818 T29819 nummod 75,μl
R8791 T29819 T29817 pobj μl,with
R8792 T29820 T29819 prep of,μl
R8793 T29821 T29822 compound mixture,solution
R8794 T29822 T29820 pobj solution,of
R8795 T29823 T29819 acl consisting,μl
R8796 T29824 T29823 prep of,consisting
R8797 T29825 T29826 nummod 0.5,μl
R8798 T29826 T29824 pobj μl,of
R8799 T29827 T29826 prep of,μl
R8800 T29828 T29829 amod terminal,transferase
R8801 T29829 T29827 pobj transferase,of
R8802 T29830 T29829 compound deoxynucleotide,transferase
R8803 T29831 T29826 punct ", ",μl
R8804 T29832 T29833 nummod 1,μl
R8805 T29833 T29826 conj μl,μl
R8806 T29834 T29833 prep of,μl
R8807 T29835 T29836 nmod biotin,dUTP
R8808 T29836 T29834 pobj dUTP,of
R8809 T29837 T29836 punct -,dUTP
R8810 T29838 T29836 nummod 16,dUTP
R8811 T29839 T29836 punct -,dUTP
R8812 T29840 T29833 punct ", ",μl
R8813 T29841 T29842 nummod 7.5,μl
R8814 T29842 T29833 conj μl,μl
R8815 T29843 T29842 prep of,μl
R8816 T29844 T29843 pobj CoCl2,of
R8817 T29845 T29842 punct ", ",μl
R8818 T29846 T29847 nummod 15,μl
R8819 T29847 T29842 conj μl,μl
R8820 T29848 T29847 prep of,μl
R8821 T29849 T29850 nummod 5,buffer
R8822 T29850 T29848 pobj buffer,of
R8823 T29851 T29849 punct ×,5
R8824 T29852 T29853 amod terminal,transferase
R8825 T29853 T29850 compound transferase,buffer
R8826 T29854 T29853 compound deoxynucleotide,transferase
R8827 T29855 T29847 punct ", ",μl
R8828 T29856 T29847 cc and,μl
R8829 T29857 T29858 nummod 51,μl
R8830 T29858 T29847 conj μl,μl
R8831 T29859 T29858 prep of,μl
R8832 T29860 T29861 amod distilled,water
R8833 T29861 T29859 pobj water,of
R8834 T29862 T29807 punct .,incubated
R8835 T29864 T29865 prep After,incubated
R8836 T29866 T29867 nummod three,washes
R8837 T29867 T29864 pobj washes,After
R8838 T29868 T29867 prep in,washes
R8839 T29869 T29870 nummod 4,buffer
R8840 T29870 T29868 pobj buffer,in
R8841 T29871 T29869 punct ×,4
R8842 T29872 T29870 compound SSC,buffer
R8843 T29873 T29865 punct ", ",incubated
R8844 T29874 T29865 nsubjpass sections,incubated
R8845 T29875 T29865 auxpass were,incubated
R8846 T29876 T29865 prep with,incubated
R8847 T29877 T29878 nmod Alexa,streptavidin
R8848 T29878 T29876 pobj streptavidin,with
R8849 T29879 T29877 nummod 488,Alexa
R8850 T29880 T29877 punct –,Alexa
R8851 T29881 T29877 cc or,Alexa
R8852 T29882 T29877 conj Alexa,Alexa
R8853 T29883 T29882 nummod 568,Alexa
R8854 T29884 T29878 punct −,streptavidin
R8855 T29885 T29886 punct (,Probes
R8856 T29886 T29878 parataxis Probes,streptavidin
R8857 T29887 T29886 dep 1,Probes
R8858 T29888 T29889 punct :,"1,000"
R8859 T29889 T29887 prep "1,000",1
R8860 T29890 T29886 punct ;,Probes
R8861 T29891 T29886 compound Molecular,Probes
R8862 T29892 T29886 punct ", ",Probes
R8863 T29893 T29886 npadvmod http://probes.invitrogen.com,Probes
R8864 T29894 T29886 punct ),Probes
R8865 T29895 T29865 prep for,incubated
R8866 T29896 T29897 nummod 1,h
R8867 T29897 T29895 pobj h,for
R8868 T29898 T29865 prep at,incubated
R8869 T29899 T29900 compound room,temperature
R8870 T29900 T29898 pobj temperature,at
R8871 T29901 T29865 punct .,incubated
R8872 T29903 T29904 amod Primary,antibodies
R8873 T29904 T29905 nsubjpass antibodies,visualized
R8874 T29906 T29904 cc or,antibodies
R8875 T29907 T29908 amod labelled,cells
R8876 T29908 T29904 conj cells,antibodies
R8877 T29909 T29905 auxpass were,visualized
R8878 T29910 T29905 advcl using,visualized
R8879 T29911 T29912 nmod donkey,Alexa
R8880 T29912 T29910 dobj Alexa,using
R8881 T29913 T29912 amod anti-mouse,Alexa
R8882 T29914 T29912 nummod 488,Alexa
R8883 T29915 T29912 cc or,Alexa
R8884 T29916 T29912 conj Alexa,Alexa
R8885 T29917 T29916 nummod 568,Alexa
R8886 T29918 T29912 punct ", ",Alexa
R8887 T29919 T29920 nmod donkey,Alexa
R8888 T29920 T29912 conj Alexa,Alexa
R8889 T29921 T29920 amod anti-rabbit,Alexa
R8890 T29922 T29920 nummod 488,Alexa
R8891 T29923 T29920 cc or,Alexa
R8892 T29924 T29920 conj Alexa,Alexa
R8893 T29925 T29924 nummod 568,Alexa
R8894 T29926 T29920 punct ", ",Alexa
R8895 T29927 T29928 nmod donkey,Alexa
R8896 T29928 T29920 conj Alexa,Alexa
R8897 T29929 T29928 amod anti-goat,Alexa
R8898 T29930 T29928 nummod 488,Alexa
R8899 T29931 T29928 cc or,Alexa
R8900 T29932 T29928 conj Alexa,Alexa
R8901 T29933 T29932 nummod 568,Alexa
R8902 T29934 T29928 punct ", ",Alexa
R8903 T29935 T29928 cc and,Alexa
R8904 T29936 T29937 compound streptavidin,Alexa
R8905 T29937 T29928 conj Alexa,Alexa
R8906 T29938 T29937 nummod 488,Alexa
R8907 T29939 T29937 cc or,Alexa
R8908 T29940 T29937 conj Alexa,Alexa
R8909 T29941 T29940 nummod 568,Alexa
R8910 T29942 T29943 punct (,Probes
R8911 T29943 T29910 parataxis Probes,using
R8912 T29944 T29943 dep 1,Probes
R8913 T29945 T29946 punct :,"1,000"
R8914 T29946 T29944 prep "1,000",1
R8915 T29947 T29943 punct ;,Probes
R8916 T29948 T29943 compound Molecular,Probes
R8917 T29949 T29943 punct ),Probes
R8918 T29950 T29905 punct .,visualized
R8919 T29952 T29953 nsubjpass Nuclei,stained
R8920 T29954 T29953 auxpass were,stained
R8921 T29955 T29953 advmod counter,stained
R8922 T29956 T29953 punct -,stained
R8923 T29957 T29953 prep with,stained
R8924 T29958 T29959 nummod 4,diamidino
R8925 T29959 T29963 nmod diamidino,phenyindole
R8926 T29960 T29959 punct ",",diamidino
R8927 T29961 T29959 nummod 6,diamidino
R8928 T29962 T29959 punct -,diamidino
R8929 T29963 T29957 pobj phenyindole,with
R8930 T29964 T29963 punct -,phenyindole
R8931 T29965 T29963 nummod 2,phenyindole
R8932 T29966 T29963 punct -,phenyindole
R8933 T29967 T29963 punct (,phenyindole
R8934 T29968 T29963 appos DAPI,phenyindole
R8935 T29969 T29970 punct ;,Sigma
R8936 T29970 T29963 parataxis Sigma,phenyindole
R8937 T29971 T29970 punct ", ",Sigma
R8938 T29972 T29970 npadvmod http://www.sigmaaldrich.com,Sigma
R8939 T29973 T29970 punct ),Sigma
R8940 T29974 T29953 punct .,stained
R8941 T29976 T29977 amod Labelled,cells
R8942 T29977 T29978 nsubjpass cells,visualized
R8943 T29979 T29978 auxpass were,visualized
R8944 T29980 T29978 advcl using,visualized
R8945 T29981 T29982 det a,microscope
R8946 T29982 T29980 dobj microscope,using
R8947 T29983 T29982 nmod Zeiss,microscope
R8948 T29984 T29983 punct (,Zeiss
R8949 T29985 T29983 appos http://www.zeiss.com,Zeiss
R8950 T29986 T29982 punct ),microscope
R8951 T29987 T29982 nmod Axioplan,microscope
R8952 T29988 T29987 punct -,Axioplan
R8953 T29989 T29987 nummod 2,Axioplan
R8954 T29990 T29982 prep with,microscope
R8955 T29991 T29992 compound Plan,Neofluar
R8956 T29992 T29993 compound Neofluar,objectives
R8957 T29993 T29990 pobj objectives,with
R8958 T29994 T29978 cc and,visualized
R8959 T29995 T29996 nsubj images,captured
R8960 T29996 T29978 conj captured,visualized
R8961 T29997 T29996 prep with,captured
R8962 T29998 T29999 det a,camera
R8963 T29999 T29997 pobj camera,with
R8964 T30000 T30001 compound Zeiss,AxionCam
R8965 T30001 T29999 compound AxionCam,camera
R8966 T30002 T29996 punct .,captured
R8967 T30004 T30005 prep For,obtained
R8968 T30006 T30007 amod double,labelled
R8969 T30007 T30009 amod labelled,samples
R8970 T30008 T30007 punct -,labelled
R8971 T30009 T30004 pobj samples,For
R8972 T30010 T30005 punct ", ",obtained
R8973 T30011 T30012 amod confocal,images
R8974 T30012 T30005 nsubjpass images,obtained
R8975 T30013 T30005 auxpass were,obtained
R8976 T30014 T30005 prep with,obtained
R8977 T30015 T30016 det a,microscope
R8978 T30016 T30014 pobj microscope,with
R8979 T30017 T30018 nmod Zeiss,LSM
R8980 T30018 T30016 nmod LSM,microscope
R8981 T30019 T30018 nummod 5.0,LSM
R8982 T30020 T30021 compound laser,scanning
R8983 T30021 T30016 compound scanning,microscope
R8984 T30022 T30005 punct .,obtained
R8985 T30024 T30025 det The,retina
R8986 T30025 T30026 nsubjpass retina,separated
R8987 T30027 T30026 auxpass was,separated
R8988 T30028 T30026 prep into,separated
R8989 T30029 T30030 nummod three,bins
R8990 T30030 T30028 pobj bins,into
R8991 T30031 T30026 prep by,separated
R8992 T30032 T30031 pcomp dividing,by
R8993 T30033 T30034 det the,edge
R8994 T30034 T30032 dobj edge,dividing
R8995 T30035 T30034 amod ventricular,edge
R8996 T30036 T30034 prep of,edge
R8997 T30037 T30038 det the,retina
R8998 T30038 T30036 pobj retina,of
R8999 T30039 T30032 prep into,dividing
R9000 T30040 T30041 amod equal,parts
R9001 T30041 T30039 pobj parts,into
R9002 T30042 T30032 cc and,dividing
R9003 T30043 T30032 conj extending,dividing
R9004 T30044 T30045 det a,line
R9005 T30045 T30043 dobj line,extending
R9006 T30046 T30043 prep to,extending
R9007 T30047 T30048 det the,edge
R9008 T30048 T30046 pobj edge,to
R9009 T30049 T30048 amod vitreal,edge
R9010 T30050 T30051 punct [,2
R9011 T30051 T30043 parataxis 2,extending
R9012 T30052 T30051 punct ],2
R9013 T30053 T30026 punct .,separated
R9014 T30055 T30056 nsubj Bin,contains
R9015 T30056 T30058 ccomp contains,is
R9016 T30057 T30055 nummod 1,Bin
R9017 T30059 T30060 amod only,cells
R9018 T30060 T30056 dobj cells,contains
R9019 T30061 T30062 dep that,expressed
R9020 T30062 T30060 relcl expressed,cells
R9021 T30063 T30062 dobj Cre,expressed
R9022 T30064 T30062 prep as,expressed
R9023 T30065 T30064 pobj progenitors,as
R9024 T30066 T30058 punct ;,is
R9025 T30067 T30058 nsubj bin,is
R9026 T30068 T30067 nummod 3,bin
R9027 T30069 T30058 prep at,is
R9028 T30070 T30071 amod central,retina
R9029 T30071 T30069 pobj retina,at
R9030 T30072 T30058 cc and,is
R9031 T30073 T30058 conj contains,is
R9032 T30074 T30073 dobj cells,contains
R9033 T30075 T30074 acl derived,cells
R9034 T30076 T30075 prep from,derived
R9035 T30077 T30076 pobj progenitors,from
R9036 T30078 T30079 dep that,express
R9037 T30079 T30077 relcl express,progenitors
R9038 T30080 T30079 aux did,express
R9039 T30081 T30079 neg not,express
R9040 T30082 T30079 dobj Cre,express
R9041 T30083 T30058 punct .,is
R9042 T30085 T30086 prep For,used
R9043 T30087 T30088 compound cell,counts
R9044 T30088 T30085 pobj counts,For
R9045 T30089 T30088 cc or,counts
R9046 T30090 T30091 compound thickness,measurement
R9047 T30091 T30088 conj measurement,counts
R9048 T30092 T30086 nsubj we,used
R9049 T30093 T30094 det a,region
R9050 T30094 T30086 dobj region,used
R9051 T30095 T30096 quantmod 0,100
R9052 T30096 T30098 nummod 100,μm
R9053 T30097 T30096 punct –,100
R9054 T30098 T30099 npadvmod μm,peripheral
R9055 T30099 T30094 amod peripheral,region
R9056 T30100 T30099 prep to,peripheral
R9057 T30101 T30102 det the,boundary
R9058 T30102 T30100 pobj boundary,to
R9059 T30103 T30102 acl separating,boundary
R9060 T30104 T30105 nmod bins,1
R9061 T30105 T30103 dobj 1,separating
R9062 T30106 T30105 cc and,1
R9063 T30107 T30105 conj 2,1
R9064 T30108 T30086 punct .,used
R9065 T30110 T30111 nsubjpass Measurements,performed
R9066 T30112 T30111 auxpass were,performed
R9067 T30113 T30111 prep on,performed
R9068 T30114 T30115 det an,microscope
R9069 T30115 T30113 pobj microscope,on
R9070 T30116 T30115 nmod Axioplan,microscope
R9071 T30117 T30116 punct -,Axioplan
R9072 T30118 T30116 nummod 2,Axioplan
R9073 T30119 T30111 advcl using,performed
R9074 T30120 T30121 compound Axiovison,software
R9075 T30121 T30119 dobj software,using
R9076 T30122 T30111 punct .,performed
R9077 T30124 T30125 nsubjpass Quantification,performed
R9078 T30126 T30124 prep of,Quantification
R9079 T30127 T30128 nmod S,phase
R9080 T30128 T30130 nmod phase,cells
R9081 T30129 T30128 punct -,phase
R9082 T30130 T30126 pobj cells,of
R9083 T30131 T30128 punct ", ",phase
R9084 T30132 T30133 compound M,phase
R9085 T30133 T30128 conj phase,phase
R9086 T30134 T30133 punct -,phase
R9087 T30135 T30133 punct ", ",phase
R9088 T30136 T30133 cc and,phase
R9089 T30137 T30133 conj apoptotic,phase
R9090 T30138 T30125 auxpass was,performed
R9091 T30139 T30125 prep on,performed
R9092 T30140 T30141 amod horizontal,sections
R9093 T30141 T30139 pobj sections,on
R9094 T30142 T30143 dep that,included
R9095 T30143 T30141 relcl included,sections
R9096 T30144 T30145 det the,nerve
R9097 T30145 T30143 dobj nerve,included
R9098 T30146 T30145 amod optic,nerve
R9099 T30147 T30125 punct .,performed
R9100 T30149 T30150 nsubjpass Quantification,performed
R9101 T30151 T30149 prep of,Quantification
R9102 T30152 T30153 amod differentiated,types
R9103 T30153 T30151 pobj types,of
R9104 T30154 T30153 compound cell,types
R9105 T30155 T30150 auxpass was,performed
R9106 T30156 T30150 advcl using,performed
R9107 T30157 T30158 amod horizontal,sections
R9108 T30158 T30156 dobj sections,using
R9109 T30159 T30158 prep at,sections
R9110 T30160 T30161 amod equal,distances
R9111 T30161 T30159 pobj distances,at
R9112 T30162 T30161 prep from,distances
R9113 T30163 T30164 det the,nerve
R9114 T30164 T30162 pobj nerve,from
R9115 T30165 T30164 amod optic,nerve
R9116 T30166 T30150 punct .,performed
R9117 T30168 T30169 det A,minimum
R9118 T30169 T30170 nsubjpass minimum,counted
R9119 T30171 T30169 prep of,minimum
R9120 T30172 T30173 nummod three,sections
R9121 T30173 T30171 pobj sections,of
R9122 T30174 T30173 prep per,sections
R9123 T30175 T30174 pobj eye,per
R9124 T30176 T30173 cc and,sections
R9125 T30177 T30178 nummod three,eyes
R9126 T30178 T30173 conj eyes,sections
R9127 T30179 T30178 prep from,eyes
R9128 T30180 T30181 amod different,litters
R9129 T30181 T30179 pobj litters,from
R9130 T30182 T30170 auxpass were,counted
R9131 T30183 T30170 punct .,counted

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T29576 673-684 CHEBI:30769 denotes citric acid
T29577 685-693 CHEBI:75958 denotes solution
T29578 858-865 CHEBI:60004 denotes mixture
T29579 866-874 CHEBI:75958 denotes solution
T29558 49-57 UBERON:0010230 denotes Eyeballs
T29559 75-91 CHEBI_EXT:paraformaldehye denotes paraformaldehyde
T29560 280-287 GO:0051320 denotes S-phase
T29561 298-302 CHEBI:472552 denotes BrdU
T29562 316-320 UBERON_EXT:body denotes body
T29563 347-359 UBERON:0001179 denotes peritoneally
T29564 373-382 GO_EXT:killing denotes sacrifice
T29565 384-388 CHEBI:472552 denotes BrdU
T29566 390-395 CL_GO_EXT:cell denotes cells
T29567 418-424 CHEBI:15956 denotes biotin
T29568 418-435 MOP:0000093 denotes biotin-conjugated
T29569 436-441 NCBITaxon:9940 denotes sheep
T29570 453-461 GO:0042571 denotes antibody
T29571 546-556 GO:0042571 denotes antibodies
T29572 588-592 PR_EXT:000006854 denotes E2f3
T29573 594-599 PR_EXT:000010425 denotes Mki67
T29574 605-607 PR_EXT:000013773 denotes Rb
T29575 618-625 CHEBI_EXT:59132 denotes antigen
T29580 899-935 GO_PR_EXT:DNA_nucleotidylexotransferase denotes terminal deoxynucleotide transferase
T29581 908-923 CHEBI_SO_EXT:deoxyribonucleotide denotes deoxynucleotide
T29582 945-951 CHEBI:15956 denotes biotin
T29583 955-959 CHEBI_EXT:dUTP denotes dUTP
T29584 971-976 CHEBI:35696 denotes CoCl2
T29585 990-1026 GO_PR_EXT:DNA_nucleotidylexotransferase denotes terminal deoxynucleotide transferase
T29586 999-1014 CHEBI_SO_EXT:deoxyribonucleotide denotes deoxynucleotide
T29587 1027-1033 CHEBI_CHMO_EXT:buffer_solution denotes buffer
T29588 1058-1063 CHEBI:15377 denotes water
T29589 1090-1093 CHEBI_EXT:saline_sodium_citrate denotes SSC
T29590 1094-1100 CHEBI_CHMO_EXT:buffer_solution denotes buffer
T29591 1131-1140 CHEBI:52661 denotes Alexa 488
T29592 1145-1154 CHEBI:51766 denotes Alexa 568
T29593 1178-1187 CHEBI_EXT:polyatomic_entity_or_group denotes Molecular
T29594 1188-1194 CHEBI_SO_EXT:molecular_probe denotes Probes
T29595 1263-1273 GO:0042571 denotes antibodies
T29596 1277-1285 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labelled
T29597 1286-1291 CL_GO_EXT:cell denotes cells
T29598 1314-1320 NCBITaxon:9793 denotes donkey
T29599 1326-1331 NCBITaxon:10088 denotes mouse
T29600 1332-1341 CHEBI:52661 denotes Alexa 488
T29601 1345-1354 CHEBI:51766 denotes Alexa 568
T29602 1356-1362 NCBITaxon:9793 denotes donkey
T29603 1368-1374 NCBITaxon:9986 denotes rabbit
T29604 1375-1384 CHEBI:52661 denotes Alexa 488
T29605 1388-1397 CHEBI:51766 denotes Alexa 568
T29606 1399-1405 NCBITaxon:9793 denotes donkey
T29607 1411-1415 NCBITaxon:9925 denotes goat
T29608 1416-1425 CHEBI:52661 denotes Alexa 488
T29609 1429-1438 CHEBI:51766 denotes Alexa 568
T29610 1457-1466 CHEBI:52661 denotes Alexa 488
T29611 1470-1479 CHEBI:51766 denotes Alexa 568
T29612 1490-1499 CHEBI_EXT:polyatomic_entity_or_group denotes Molecular
T29613 1500-1506 CHEBI_SO_EXT:molecular_probe denotes Probes
T29614 1509-1515 GO:0005634 denotes Nuclei
T29615 1542-1569 CHEBI:51231 denotes 4,6-diamidino-2-phenyindole
T29616 1571-1575 CHEBI:51231 denotes DAPI
T29617 1614-1622 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes Labelled
T29618 1623-1628 CL_GO_EXT:cell denotes cells
T29619 1795-1803 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labelled
T29620 1895-1901 UBERON:0000966 denotes retina
T29621 1948-1959 UBERON:0004086 denotes ventricular
T29622 1972-1978 UBERON:0000966 denotes retina
T29623 2024-2031 UBERON:0001797 denotes vitreal
T29624 2062-2067 CL_GO_EXT:cell denotes cells
T29625 2073-2082 GO:0010467 denotes expressed
T29626 2123-2129 UBERON:0000966 denotes retina
T29627 2143-2148 CL_GO_EXT:cell denotes cells
T29628 2187-2194 GO:0010467 denotes express
T29629 2204-2208 CL_GO_EXT:cell denotes cell
T29630 2419-2426 GO:0051320 denotes S-phase
T29631 2428-2435 GO:0000279 denotes M-phase
T29632 2441-2450 GO_PATO_EXT:apoptotic_process_or_quality denotes apoptotic
T29633 2441-2456 CL:0000445 denotes apoptotic cells
T29634 2451-2456 CL_GO_EXT:cell denotes cells
T29635 2512-2523 UBERON_EXT:optic_nerve denotes optic nerve
T29636 2543-2557 GO_PATO_RO_EXT:developmental_differentiation_process_or_quality denotes differentiated
T29637 2558-2562 CL_GO_EXT:cell denotes cell
T29638 2637-2648 UBERON_EXT:optic_nerve denotes optic nerve
T29639 2682-2685 UBERON:0000970 denotes eye
T29640 2696-2700 UBERON:0000970 denotes eyes

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T29503 49-57 UBERON:0010230 denotes Eyeballs
T29504 280-287 GO:0051320 denotes S-phase
T29505 298-302 CHEBI:472552 denotes BrdU
T29506 347-359 UBERON:0001179 denotes peritoneally
T29507 384-388 CHEBI:472552 denotes BrdU
T29508 418-424 CHEBI:15956 denotes biotin
T29509 418-435 MOP:0000093 denotes biotin-conjugated
T29510 436-441 NCBITaxon:9940 denotes sheep
T29511 453-461 GO:0042571 denotes antibody
T29512 546-556 GO:0042571 denotes antibodies
T29513 588-592 PR:000006854 denotes E2f3
T29514 594-599 PR:000010425 denotes Mki67
T29515 605-607 PR:000013773 denotes Rb
T29516 618-625 CHEBI:59132 denotes antigen
T29517 673-684 CHEBI:30769 denotes citric acid
T29518 685-693 CHEBI:75958 denotes solution
T29519 858-865 CHEBI:60004 denotes mixture
T29520 866-874 CHEBI:75958 denotes solution
T29521 945-951 CHEBI:15956 denotes biotin
T29522 971-976 CHEBI:35696 denotes CoCl2
T29523 1058-1063 CHEBI:15377 denotes water
T29524 1131-1140 CHEBI:52661 denotes Alexa 488
T29525 1145-1154 CHEBI:51766 denotes Alexa 568
T29526 1263-1273 GO:0042571 denotes antibodies
T29527 1314-1320 NCBITaxon:9793 denotes donkey
T29528 1326-1331 NCBITaxon:10088 denotes mouse
T29529 1332-1341 CHEBI:52661 denotes Alexa 488
T29530 1345-1354 CHEBI:51766 denotes Alexa 568
T29531 1356-1362 NCBITaxon:9793 denotes donkey
T29532 1368-1374 NCBITaxon:9986 denotes rabbit
T29533 1375-1384 CHEBI:52661 denotes Alexa 488
T29534 1388-1397 CHEBI:51766 denotes Alexa 568
T29535 1399-1405 NCBITaxon:9793 denotes donkey
T29536 1411-1415 NCBITaxon:9925 denotes goat
T29537 1416-1425 CHEBI:52661 denotes Alexa 488
T29538 1429-1438 CHEBI:51766 denotes Alexa 568
T29539 1457-1466 CHEBI:52661 denotes Alexa 488
T29540 1470-1479 CHEBI:51766 denotes Alexa 568
T29541 1509-1515 GO:0005634 denotes Nuclei
T29542 1542-1569 CHEBI:51231 denotes 4,6-diamidino-2-phenyindole
T29543 1571-1575 CHEBI:51231 denotes DAPI
T29544 1895-1901 UBERON:0000966 denotes retina
T29545 1948-1959 UBERON:0004086 denotes ventricular
T29546 1972-1978 UBERON:0000966 denotes retina
T29547 2024-2031 UBERON:0001797 denotes vitreal
T29548 2073-2082 GO:0010467 denotes expressed
T29549 2123-2129 UBERON:0000966 denotes retina
T29550 2187-2194 GO:0010467 denotes express
T29551 2419-2426 GO:0051320 denotes S-phase
T29552 2428-2435 GO:0000279 denotes M-phase
T29553 2441-2456 CL:0000445 denotes apoptotic cells
T29554 2512-2517 UBERON:0000970 denotes optic
T29555 2637-2642 UBERON:0000970 denotes optic
T29556 2682-2685 UBERON:0000970 denotes eye
T29557 2696-2700 UBERON:0000970 denotes eyes

2_test

Id Subject Object Predicate Lexical cue
17608565-12871981-84869043 723-725 12871981 denotes 50
17608565-12093735-84869044 789-791 12093735 denotes 13
17608565-15193257-84869045 2038-2039 15193257 denotes 2
T15764 723-725 12871981 denotes 50
T25882 789-791 12093735 denotes 13
T11057 2038-2039 15193257 denotes 2