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PMC:1914394 / 49203-50724 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T25716 0-8 JJ denotes Distinct
T25717 25-37 NN denotes Localization
T25718 9-14 NN denotes E2f3a
T25719 15-18 CC denotes and
T25720 19-24 NN denotes E2f3b
T25721 37-126 sentence denotes The subcellular location of E2f isoforms has not to our knowledge been addressed before.
T25722 38-41 DT denotes The
T25723 54-62 NN denotes location
T25724 42-53 JJ denotes subcellular
T25725 109-118 VBN denotes addressed
T25726 63-65 IN denotes of
T25727 66-69 NN denotes E2f
T25728 70-78 NNS denotes isoforms
T25729 79-82 VBZ denotes has
T25730 83-86 RB denotes not
T25731 87-89 IN denotes to
T25732 90-93 PRP$ denotes our
T25733 94-103 NN denotes knowledge
T25734 104-108 VBN denotes been
T25735 119-125 RB denotes before
T25736 125-126 . denotes .
T25737 126-348 sentence denotes E2f3a and E2f3b share 110 C-terminal amino acids that encode the NLS, DNA-binding, marked box, transactivation, and Rb-binding domains [16], yet they exhibit different subcellular distribution in developing retinal cells.
T25738 127-132 NN denotes E2f3a
T25739 143-148 VBP denotes share
T25740 133-136 CC denotes and
T25741 137-142 NN denotes E2f3b
T25742 149-152 CD denotes 110
T25743 170-175 NNS denotes acids
T25744 153-154 NN denotes C
T25745 155-163 JJ denotes terminal
T25746 154-155 HYPH denotes -
T25747 164-169 NN denotes amino
T25748 176-180 WDT denotes that
T25749 181-187 VBP denotes encode
T25750 188-191 DT denotes the
T25751 254-261 NNS denotes domains
T25752 192-195 NN denotes NLS
T25753 195-197 , denotes ,
T25754 197-200 NN denotes DNA
T25755 200-201 HYPH denotes -
T25756 201-208 VBG denotes binding
T25757 208-210 , denotes ,
T25758 210-216 JJ denotes marked
T25759 217-220 NN denotes box
T25760 220-222 , denotes ,
T25761 222-237 NN denotes transactivation
T25762 237-239 , denotes ,
T25763 239-242 CC denotes and
T25764 243-245 NN denotes Rb
T25765 245-246 HYPH denotes -
T25766 246-253 VBG denotes binding
T25767 262-263 -LRB- denotes [
T25768 263-265 CD denotes 16
T25769 265-266 -RRB- denotes ]
T25770 266-268 , denotes ,
T25771 268-271 CC denotes yet
T25772 272-276 PRP denotes they
T25773 277-284 VBP denotes exhibit
T25774 285-294 JJ denotes different
T25775 307-319 NN denotes distribution
T25776 295-306 JJ denotes subcellular
T25777 320-322 IN denotes in
T25778 323-333 VBG denotes developing
T25779 342-347 NNS denotes cells
T25780 334-341 JJ denotes retinal
T25781 347-348 . denotes .
T25782 348-416 sentence denotes E2f3a is both nuclear and cytoplasmic, but E2f3b is always nuclear.
T25783 349-354 NN denotes E2f3a
T25784 355-357 VBZ denotes is
T25785 358-362 CC denotes both
T25786 363-370 JJ denotes nuclear
T25787 371-374 CC denotes and
T25788 375-386 JJ denotes cytoplasmic
T25789 386-388 , denotes ,
T25790 388-391 CC denotes but
T25791 392-397 NN denotes E2f3b
T25792 398-400 VBZ denotes is
T25793 401-407 RB denotes always
T25794 408-415 JJ denotes nuclear
T25795 415-416 . denotes .
T25796 416-524 sentence denotes The unique 121- and six-residue N-termini of E2f3a and E2f3b, respectively, likely mediate this difference.
T25797 417-420 DT denotes The
T25798 451-458 NNS denotes termini
T25799 421-427 JJ denotes unique
T25800 428-431 CD denotes 121
T25801 441-448 NN denotes residue
T25802 431-432 HYPH denotes -
T25803 433-436 CC denotes and
T25804 437-440 CD denotes six
T25805 440-441 HYPH denotes -
T25806 449-450 NNS denotes N
T25807 450-451 HYPH denotes -
T25808 500-507 VBP denotes mediate
T25809 459-461 IN denotes of
T25810 462-467 NN denotes E2f3a
T25811 468-471 CC denotes and
T25812 472-477 NN denotes E2f3b
T25813 477-479 , denotes ,
T25814 479-491 RB denotes respectively
T25815 491-493 , denotes ,
T25816 493-499 RB denotes likely
T25817 508-512 DT denotes this
T25818 513-523 NN denotes difference
T25819 523-524 . denotes .
T25820 524-665 sentence denotes This region in E2f1, E2f2, and E2f3a binds Ccna2, establishing a negative regulatory loop that deactivates E2fs in mid-late S-phase [64,65].
T25821 525-529 DT denotes This
T25822 530-536 NN denotes region
T25823 562-567 VBZ denotes binds
T25824 537-539 IN denotes in
T25825 540-544 NN denotes E2f1
T25826 544-546 , denotes ,
T25827 546-550 NN denotes E2f2
T25828 550-552 , denotes ,
T25829 552-555 CC denotes and
T25830 556-561 NN denotes E2f3a
T25831 568-573 NN denotes Ccna2
T25832 573-575 , denotes ,
T25833 575-587 VBG denotes establishing
T25834 588-589 DT denotes a
T25835 610-614 NN denotes loop
T25836 590-598 JJ denotes negative
T25837 599-609 JJ denotes regulatory
T25838 615-619 WDT denotes that
T25839 620-631 VBZ denotes deactivates
T25840 632-636 NNS denotes E2fs
T25841 637-639 IN denotes in
T25842 640-643 JJ denotes mid
T25843 644-648 JJ denotes late
T25844 643-644 SYM denotes -
T25845 651-656 NN denotes phase
T25846 649-650 NN denotes S
T25847 650-651 HYPH denotes -
T25848 657-658 -LRB- denotes [
T25849 661-663 CD denotes 65
T25850 658-660 CD denotes 64
T25851 660-661 , denotes ,
T25852 663-664 -RRB- denotes ]
T25853 664-665 . denotes .
T25854 665-828 sentence denotes However, even E2f3b, which lacks this domain, binds and is regulated by Ccna2 [18], so the domain difference may not explain the unique distributions we observed.
T25855 666-673 RB denotes However
T25856 712-717 VBZ denotes binds
T25857 673-675 , denotes ,
T25858 675-679 RB denotes even
T25859 680-685 NN denotes E2f3b
T25860 685-687 , denotes ,
T25861 687-692 WDT denotes which
T25862 693-698 VBZ denotes lacks
T25863 699-703 DT denotes this
T25864 704-710 NN denotes domain
T25865 710-712 , denotes ,
T25866 718-721 CC denotes and
T25867 722-724 VBZ denotes is
T25868 725-734 VBN denotes regulated
T25869 735-737 IN denotes by
T25870 738-743 NN denotes Ccna2
T25871 744-745 -LRB- denotes [
T25872 745-747 CD denotes 18
T25873 747-748 -RRB- denotes ]
T25874 748-750 , denotes ,
T25875 750-752 IN denotes so
T25876 783-790 VB denotes explain
T25877 753-756 DT denotes the
T25878 764-774 NN denotes difference
T25879 757-763 NN denotes domain
T25880 775-778 MD denotes may
T25881 779-782 RB denotes not
T25882 791-794 DT denotes the
T25883 802-815 NNS denotes distributions
T25884 795-801 JJ denotes unique
T25885 816-818 PRP denotes we
T25886 819-827 VBD denotes observed
T25887 827-828 . denotes .
T25888 828-993 sentence denotes Rb family and Tfdp proteins can also determine E2f localization [20–22], and we found that a portion of both Rb and Tfdp1 proteins are cytoplasmic in retinal cells.
T25889 829-831 NN denotes Rb
T25890 832-838 NN denotes family
T25891 848-856 NN denotes proteins
T25892 839-842 CC denotes and
T25893 843-847 NN denotes Tfdp
T25894 866-875 VB denotes determine
T25895 857-860 MD denotes can
T25896 861-865 RB denotes also
T25897 876-879 NN denotes E2f
T25898 880-892 NN denotes localization
T25899 893-894 -LRB- denotes [
T25900 894-896 CD denotes 20
T25901 896-897 SYM denotes –
T25902 897-899 CD denotes 22
T25903 899-900 -RRB- denotes ]
T25904 900-902 , denotes ,
T25905 902-905 CC denotes and
T25906 906-908 PRP denotes we
T25907 909-914 VBD denotes found
T25908 915-919 IN denotes that
T25909 960-963 VBP denotes are
T25910 920-921 DT denotes a
T25911 922-929 NN denotes portion
T25912 930-932 IN denotes of
T25913 933-937 CC denotes both
T25914 938-940 NN denotes Rb
T25915 951-959 NN denotes proteins
T25916 941-944 CC denotes and
T25917 945-950 NN denotes Tfdp1
T25918 964-975 JJ denotes cytoplasmic
T25919 976-978 IN denotes in
T25920 979-986 JJ denotes retinal
T25921 987-992 NNS denotes cells
T25922 992-993 . denotes .
T25923 993-1071 sentence denotes Indeed, immunostaining revealed that Rb and E2f3 colocalize to SAC processes.
T25924 994-1000 RB denotes Indeed
T25925 1017-1025 VBD denotes revealed
T25926 1000-1002 , denotes ,
T25927 1002-1016 NN denotes immunostaining
T25928 1026-1030 IN denotes that
T25929 1043-1053 VBP denotes colocalize
T25930 1031-1033 NN denotes Rb
T25931 1034-1037 CC denotes and
T25932 1038-1042 NN denotes E2f3
T25933 1054-1056 IN denotes to
T25934 1057-1060 NN denotes SAC
T25935 1061-1070 NNS denotes processes
T25936 1070-1071 . denotes .
T25937 1071-1274 sentence denotes The nuclear localization of E2f3b contrasts with that of other repressive E2fs in differentiating muscle, where E2f5 switches from the nucleus to cytoplasm, while E2f4 remains in both compartments [23].
T25938 1072-1075 DT denotes The
T25939 1084-1096 NN denotes localization
T25940 1076-1083 JJ denotes nuclear
T25941 1106-1115 VBZ denotes contrasts
T25942 1097-1099 IN denotes of
T25943 1100-1105 NN denotes E2f3b
T25944 1116-1120 IN denotes with
T25945 1121-1125 DT denotes that
T25946 1126-1128 IN denotes of
T25947 1129-1134 JJ denotes other
T25948 1146-1150 NNS denotes E2fs
T25949 1135-1145 JJ denotes repressive
T25950 1151-1153 IN denotes in
T25951 1154-1169 VBG denotes differentiating
T25952 1170-1176 NN denotes muscle
T25953 1176-1178 , denotes ,
T25954 1178-1183 WRB denotes where
T25955 1189-1197 VBZ denotes switches
T25956 1184-1188 NN denotes E2f5
T25957 1198-1202 IN denotes from
T25958 1203-1206 DT denotes the
T25959 1207-1214 NN denotes nucleus
T25960 1215-1217 IN denotes to
T25961 1218-1227 NN denotes cytoplasm
T25962 1227-1229 , denotes ,
T25963 1229-1234 IN denotes while
T25964 1240-1247 VBZ denotes remains
T25965 1235-1239 NN denotes E2f4
T25966 1248-1250 IN denotes in
T25967 1251-1255 DT denotes both
T25968 1256-1268 NNS denotes compartments
T25969 1269-1270 -LRB- denotes [
T25970 1270-1272 CD denotes 23
T25971 1272-1273 -RRB- denotes ]
T25972 1273-1274 . denotes .
T25973 1274-1399 sentence denotes The distinct compartmentalization of E2f3a and E2f3b in the retina suggests temporally and functionally distinct activities.
T25974 1275-1278 DT denotes The
T25975 1288-1308 NN denotes compartmentalization
T25976 1279-1287 JJ denotes distinct
T25977 1342-1350 VBZ denotes suggests
T25978 1309-1311 IN denotes of
T25979 1312-1317 NN denotes E2f3a
T25980 1318-1321 CC denotes and
T25981 1322-1327 NN denotes E2f3b
T25982 1328-1330 IN denotes in
T25983 1331-1334 DT denotes the
T25984 1335-1341 NN denotes retina
T25985 1351-1361 RB denotes temporally
T25986 1379-1387 JJ denotes distinct
T25987 1362-1365 CC denotes and
T25988 1366-1378 RB denotes functionally
T25989 1388-1398 NNS denotes activities
T25990 1398-1399 . denotes .
T25991 1399-1521 sentence denotes Rb distribution matches that of E2f3a, consistent with its critical role in supporting SAC differentiation through E2f3a.
T25992 1400-1402 NN denotes Rb
T25993 1403-1415 NN denotes distribution
T25994 1416-1423 VBZ denotes matches
T25995 1424-1428 DT denotes that
T25996 1429-1431 IN denotes of
T25997 1432-1437 NN denotes E2f3a
T25998 1437-1439 , denotes ,
T25999 1439-1449 JJ denotes consistent
T26000 1450-1454 IN denotes with
T26001 1455-1458 PRP$ denotes its
T26002 1468-1472 NN denotes role
T26003 1459-1467 JJ denotes critical
T26004 1473-1475 IN denotes in
T26005 1476-1486 VBG denotes supporting
T26006 1487-1490 NN denotes SAC
T26007 1491-1506 NN denotes differentiation
T26008 1507-1514 IN denotes through
T26009 1515-1520 NN denotes E2f3a
T26010 1520-1521 . denotes .
R7561 T25716 T25717 amod Distinct,Localization
R7562 T25718 T25717 nmod E2f3a,Localization
R7563 T25719 T25718 cc and,E2f3a
R7564 T25720 T25718 conj E2f3b,E2f3a
R7565 T25722 T25723 det The,location
R7566 T25723 T25725 nsubjpass location,addressed
R7567 T25724 T25723 amod subcellular,location
R7568 T25726 T25723 prep of,location
R7569 T25727 T25728 compound E2f,isoforms
R7570 T25728 T25726 pobj isoforms,of
R7571 T25729 T25725 aux has,addressed
R7572 T25730 T25725 neg not,addressed
R7573 T25731 T25725 prep to,addressed
R7574 T25732 T25733 poss our,knowledge
R7575 T25733 T25731 pobj knowledge,to
R7576 T25734 T25725 auxpass been,addressed
R7577 T25735 T25725 advmod before,addressed
R7578 T25736 T25725 punct .,addressed
R7579 T25738 T25739 nsubj E2f3a,share
R7580 T25740 T25738 cc and,E2f3a
R7581 T25741 T25738 conj E2f3b,E2f3a
R7582 T25742 T25743 nummod 110,acids
R7583 T25743 T25739 dobj acids,share
R7584 T25744 T25745 npadvmod C,terminal
R7585 T25745 T25743 amod terminal,acids
R7586 T25746 T25745 punct -,terminal
R7587 T25747 T25743 compound amino,acids
R7588 T25748 T25749 dep that,encode
R7589 T25749 T25743 relcl encode,acids
R7590 T25750 T25751 det the,domains
R7591 T25751 T25749 dobj domains,encode
R7592 T25752 T25751 nmod NLS,domains
R7593 T25753 T25752 punct ", ",NLS
R7594 T25754 T25752 conj DNA,NLS
R7595 T25755 T25754 punct -,DNA
R7596 T25756 T25754 amod binding,DNA
R7597 T25757 T25754 punct ", ",DNA
R7598 T25758 T25759 amod marked,box
R7599 T25759 T25754 conj box,DNA
R7600 T25760 T25759 punct ", ",box
R7601 T25761 T25759 conj transactivation,box
R7602 T25762 T25761 punct ", ",transactivation
R7603 T25763 T25761 cc and,transactivation
R7604 T25764 T25761 conj Rb,transactivation
R7605 T25765 T25764 punct -,Rb
R7606 T25766 T25764 amod binding,Rb
R7607 T25767 T25768 punct [,16
R7608 T25768 T25739 parataxis 16,share
R7609 T25769 T25768 punct ],16
R7610 T25770 T25739 punct ", ",share
R7611 T25771 T25739 cc yet,share
R7612 T25772 T25773 nsubj they,exhibit
R7613 T25773 T25739 conj exhibit,share
R7614 T25774 T25775 amod different,distribution
R7615 T25775 T25773 dobj distribution,exhibit
R7616 T25776 T25775 amod subcellular,distribution
R7617 T25777 T25773 prep in,exhibit
R7618 T25778 T25779 amod developing,cells
R7619 T25779 T25777 pobj cells,in
R7620 T25780 T25779 amod retinal,cells
R7621 T25781 T25773 punct .,exhibit
R7622 T25783 T25784 nsubj E2f3a,is
R7623 T25785 T25786 preconj both,nuclear
R7624 T25786 T25784 acomp nuclear,is
R7625 T25787 T25786 cc and,nuclear
R7626 T25788 T25786 conj cytoplasmic,nuclear
R7627 T25789 T25784 punct ", ",is
R7628 T25790 T25784 cc but,is
R7629 T25791 T25792 nsubj E2f3b,is
R7630 T25792 T25784 conj is,is
R7631 T25793 T25792 advmod always,is
R7632 T25794 T25792 acomp nuclear,is
R7633 T25795 T25792 punct .,is
R7634 T25797 T25798 det The,termini
R7635 T25798 T25808 nsubj termini,mediate
R7636 T25799 T25798 amod unique,termini
R7637 T25800 T25801 nummod 121,residue
R7638 T25801 T25798 compound residue,termini
R7639 T25802 T25800 punct -,121
R7640 T25803 T25800 cc and,121
R7641 T25804 T25800 conj six,121
R7642 T25805 T25801 punct -,residue
R7643 T25806 T25798 compound N,termini
R7644 T25807 T25798 punct -,termini
R7645 T25809 T25798 prep of,termini
R7646 T25810 T25809 pobj E2f3a,of
R7647 T25811 T25810 cc and,E2f3a
R7648 T25812 T25810 conj E2f3b,E2f3a
R7649 T25813 T25808 punct ", ",mediate
R7650 T25814 T25808 advmod respectively,mediate
R7651 T25815 T25808 punct ", ",mediate
R7652 T25816 T25808 advmod likely,mediate
R7653 T25817 T25818 det this,difference
R7654 T25818 T25808 dobj difference,mediate
R7655 T25819 T25808 punct .,mediate
R7656 T25821 T25822 det This,region
R7657 T25822 T25823 nsubj region,binds
R7658 T25824 T25822 prep in,region
R7659 T25825 T25824 pobj E2f1,in
R7660 T25826 T25825 punct ", ",E2f1
R7661 T25827 T25825 conj E2f2,E2f1
R7662 T25828 T25827 punct ", ",E2f2
R7663 T25829 T25827 cc and,E2f2
R7664 T25830 T25827 conj E2f3a,E2f2
R7665 T25831 T25823 dobj Ccna2,binds
R7666 T25832 T25823 punct ", ",binds
R7667 T25833 T25823 advcl establishing,binds
R7668 T25834 T25835 det a,loop
R7669 T25835 T25833 dobj loop,establishing
R7670 T25836 T25835 amod negative,loop
R7671 T25837 T25835 amod regulatory,loop
R7672 T25838 T25839 dep that,deactivates
R7673 T25839 T25835 relcl deactivates,loop
R7674 T25840 T25839 dobj E2fs,deactivates
R7675 T25841 T25839 prep in,deactivates
R7676 T25842 T25843 amod mid,late
R7677 T25843 T25845 amod late,phase
R7678 T25844 T25843 punct -,late
R7679 T25845 T25841 pobj phase,in
R7680 T25846 T25845 compound S,phase
R7681 T25847 T25845 punct -,phase
R7682 T25848 T25849 punct [,65
R7683 T25849 T25833 parataxis 65,establishing
R7684 T25850 T25849 nummod 64,65
R7685 T25851 T25849 punct ",",65
R7686 T25852 T25849 punct ],65
R7687 T25853 T25823 punct .,binds
R7688 T25855 T25856 advmod However,binds
R7689 T25857 T25856 punct ", ",binds
R7690 T25858 T25859 advmod even,E2f3b
R7691 T25859 T25856 nsubj E2f3b,binds
R7692 T25860 T25859 punct ", ",E2f3b
R7693 T25861 T25862 dep which,lacks
R7694 T25862 T25859 relcl lacks,E2f3b
R7695 T25863 T25864 det this,domain
R7696 T25864 T25862 dobj domain,lacks
R7697 T25865 T25856 punct ", ",binds
R7698 T25866 T25856 cc and,binds
R7699 T25867 T25868 auxpass is,regulated
R7700 T25868 T25856 conj regulated,binds
R7701 T25869 T25868 agent by,regulated
R7702 T25870 T25868 dobj Ccna2,regulated
R7703 T25871 T25872 punct [,18
R7704 T25872 T25870 parataxis 18,Ccna2
R7705 T25873 T25872 punct ],18
R7706 T25874 T25856 punct ", ",binds
R7707 T25875 T25876 mark so,explain
R7708 T25876 T25856 advcl explain,binds
R7709 T25877 T25878 det the,difference
R7710 T25878 T25876 nsubj difference,explain
R7711 T25879 T25878 compound domain,difference
R7712 T25880 T25876 aux may,explain
R7713 T25881 T25876 neg not,explain
R7714 T25882 T25883 det the,distributions
R7715 T25883 T25876 dobj distributions,explain
R7716 T25884 T25883 amod unique,distributions
R7717 T25885 T25886 nsubj we,observed
R7718 T25886 T25883 advcl observed,distributions
R7719 T25887 T25856 punct .,binds
R7720 T25889 T25890 nmod Rb,family
R7721 T25890 T25891 nmod family,proteins
R7722 T25891 T25894 nsubj proteins,determine
R7723 T25892 T25890 cc and,family
R7724 T25893 T25890 conj Tfdp,family
R7725 T25895 T25894 aux can,determine
R7726 T25896 T25894 advmod also,determine
R7727 T25897 T25898 compound E2f,localization
R7728 T25898 T25894 dobj localization,determine
R7729 T25899 T25900 punct [,20
R7730 T25900 T25894 parataxis 20,determine
R7731 T25901 T25902 punct –,22
R7732 T25902 T25900 prep 22,20
R7733 T25903 T25900 punct ],20
R7734 T25904 T25894 punct ", ",determine
R7735 T25905 T25894 cc and,determine
R7736 T25906 T25907 nsubj we,found
R7737 T25907 T25894 conj found,determine
R7738 T25908 T25909 mark that,are
R7739 T25909 T25907 ccomp are,found
R7740 T25910 T25911 det a,portion
R7741 T25911 T25909 nsubj portion,are
R7742 T25912 T25911 prep of,portion
R7743 T25913 T25914 preconj both,Rb
R7744 T25914 T25915 nmod Rb,proteins
R7745 T25915 T25912 pobj proteins,of
R7746 T25916 T25914 cc and,Rb
R7747 T25917 T25914 conj Tfdp1,Rb
R7748 T25918 T25909 acomp cytoplasmic,are
R7749 T25919 T25909 prep in,are
R7750 T25920 T25921 amod retinal,cells
R7751 T25921 T25919 pobj cells,in
R7752 T25922 T25907 punct .,found
R7753 T25924 T25925 advmod Indeed,revealed
R7754 T25926 T25925 punct ", ",revealed
R7755 T25927 T25925 nsubj immunostaining,revealed
R7756 T25928 T25929 mark that,colocalize
R7757 T25929 T25925 ccomp colocalize,revealed
R7758 T25930 T25929 nsubj Rb,colocalize
R7759 T25931 T25930 cc and,Rb
R7760 T25932 T25930 conj E2f3,Rb
R7761 T25933 T25929 prep to,colocalize
R7762 T25934 T25935 compound SAC,processes
R7763 T25935 T25933 pobj processes,to
R7764 T25936 T25925 punct .,revealed
R7765 T25938 T25939 det The,localization
R7766 T25939 T25941 nsubj localization,contrasts
R7767 T25940 T25939 amod nuclear,localization
R7768 T25942 T25939 prep of,localization
R7769 T25943 T25942 pobj E2f3b,of
R7770 T25944 T25941 prep with,contrasts
R7771 T25945 T25944 pobj that,with
R7772 T25946 T25945 prep of,that
R7773 T25947 T25948 amod other,E2fs
R7774 T25948 T25946 pobj E2fs,of
R7775 T25949 T25948 amod repressive,E2fs
R7776 T25950 T25948 prep in,E2fs
R7777 T25951 T25952 amod differentiating,muscle
R7778 T25952 T25950 pobj muscle,in
R7779 T25953 T25952 punct ", ",muscle
R7780 T25954 T25955 advmod where,switches
R7781 T25955 T25952 relcl switches,muscle
R7782 T25956 T25955 nsubj E2f5,switches
R7783 T25957 T25955 prep from,switches
R7784 T25958 T25959 det the,nucleus
R7785 T25959 T25957 pobj nucleus,from
R7786 T25960 T25957 prep to,from
R7787 T25961 T25960 pobj cytoplasm,to
R7788 T25962 T25941 punct ", ",contrasts
R7789 T25963 T25964 mark while,remains
R7790 T25964 T25941 advcl remains,contrasts
R7791 T25965 T25964 nsubj E2f4,remains
R7792 T25966 T25964 prep in,remains
R7793 T25967 T25968 det both,compartments
R7794 T25968 T25966 pobj compartments,in
R7795 T25969 T25970 punct [,23
R7796 T25970 T25964 parataxis 23,remains
R7797 T25971 T25970 punct ],23
R7798 T25972 T25941 punct .,contrasts
R7799 T25974 T25975 det The,compartmentalization
R7800 T25975 T25977 nsubj compartmentalization,suggests
R7801 T25976 T25975 amod distinct,compartmentalization
R7802 T25978 T25975 prep of,compartmentalization
R7803 T25979 T25978 pobj E2f3a,of
R7804 T25980 T25979 cc and,E2f3a
R7805 T25981 T25979 conj E2f3b,E2f3a
R7806 T25982 T25975 prep in,compartmentalization
R7807 T25983 T25984 det the,retina
R7808 T25984 T25982 pobj retina,in
R7809 T25985 T25986 advmod temporally,distinct
R7810 T25986 T25989 amod distinct,activities
R7811 T25987 T25985 cc and,temporally
R7812 T25988 T25985 conj functionally,temporally
R7813 T25989 T25977 dobj activities,suggests
R7814 T25990 T25977 punct .,suggests
R7815 T25992 T25993 compound Rb,distribution
R7816 T25993 T25994 nsubj distribution,matches
R7817 T25995 T25994 dobj that,matches
R7818 T25996 T25995 prep of,that
R7819 T25997 T25996 pobj E2f3a,of
R7820 T25998 T25994 punct ", ",matches
R7821 T25999 T25994 advcl consistent,matches
R7822 T26000 T25999 prep with,consistent
R7823 T26001 T26002 poss its,role
R7824 T26002 T26000 pobj role,with
R7825 T26003 T26002 amod critical,role
R7826 T26004 T26002 prep in,role
R7827 T26005 T26004 pcomp supporting,in
R7828 T26006 T26007 compound SAC,differentiation
R7829 T26007 T26005 dobj differentiation,supporting
R7830 T26008 T26005 prep through,supporting
R7831 T26009 T26008 pobj E2f3a,through
R7832 T26010 T25994 punct .,matches

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T25665 349-354 PR_EXT:000028775 denotes E2f3a
T25666 363-370 GO:0005634 denotes nuclear
T25644 9-14 PR_EXT:000028775 denotes E2f3a
T25645 25-37 GO_PATO_EXT:biological_localization_process_or_quality denotes Localization
T25646 42-53 GO_UBERON_EXT:cellular_component_or_cell_part denotes subcellular
T25647 45-53 CL_GO_EXT:cell denotes cellular
T25648 66-69 PR_EXT:E2F denotes E2f
T25649 70-78 SO_EXT:0001060 denotes isoforms
T25650 127-132 PR_EXT:000028775 denotes E2f3a
T25651 153-163 CHEBI_SO_EXT:C_terminus_or_C_terminal_region denotes C-terminal
T25652 164-175 CHEBI_SO_EXT:amino_acid denotes amino acids
T25653 181-187 SO_EXT:sequence_coding_function denotes encode
T25654 192-195 SO_EXT:0001528 denotes NLS
T25655 197-200 CHEBI_SO_EXT:DNA denotes DNA
T25656 201-208 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T25657 243-245 PR_EXT:000013773 denotes Rb
T25658 246-253 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T25659 254-261 SO_EXT:0000417 denotes domains
T25660 295-306 GO_UBERON_EXT:cellular_component_or_cell_part denotes subcellular
T25661 298-306 CL_GO_EXT:cell denotes cellular
T25662 334-341 UBERON:0000966 denotes retinal
T25663 334-347 CL:0009004 denotes retinal cells
T25664 342-347 CL_GO_EXT:cell denotes cells
T25667 375-386 GO:0005737 denotes cytoplasmic
T25668 408-415 GO:0005634 denotes nuclear
T25669 441-448 CHEBI_EXT:residue denotes residue
T25670 449-458 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes N-termini
T25671 462-467 PR_EXT:000028775 denotes E2f3a
T25672 540-544 PR_EXT:000006852 denotes E2f1
T25673 546-550 PR_EXT:000006853 denotes E2f2
T25674 556-561 PR_EXT:000028775 denotes E2f3a
T25675 562-567 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binds
T25676 568-573 PR_EXT:000005115 denotes Ccna2
T25677 590-609 GO_EXT:negative_regulation denotes negative regulatory
T25678 632-636 PR_EXT:E2F denotes E2fs
T25679 649-656 GO:0051320 denotes S-phase
T25680 704-710 SO_EXT:0000417 denotes domain
T25681 712-717 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binds
T25682 725-734 GO:0065007 denotes regulated
T25683 738-743 PR_EXT:000005115 denotes Ccna2
T25684 757-763 SO_EXT:0000417 denotes domain
T25685 829-831 PR_EXT:000013773 denotes Rb
T25686 843-847 PR_EXT:TFDP denotes Tfdp
T25687 848-856 CHEBI_PR_EXT:protein denotes proteins
T25688 876-879 PR_EXT:E2F denotes E2f
T25689 880-892 GO_PATO_EXT:biological_localization_process_or_quality denotes localization
T25690 938-940 PR_EXT:000013773 denotes Rb
T25691 945-950 PR_EXT:000016269 denotes Tfdp1
T25692 951-959 CHEBI_PR_EXT:protein denotes proteins
T25693 964-975 GO:0005737 denotes cytoplasmic
T25694 979-986 UBERON:0000966 denotes retinal
T25695 979-992 CL:0009004 denotes retinal cells
T25696 987-992 CL_GO_EXT:cell denotes cells
T25697 1031-1033 PR_EXT:000013773 denotes Rb
T25698 1038-1042 PR_EXT:000006854 denotes E2f3
T25699 1045-1053 GO_PATO_EXT:biological_localization_process_or_quality denotes localize
T25700 1061-1070 GO:0042995 denotes processes
T25701 1076-1083 GO:0005634 denotes nuclear
T25702 1084-1096 GO_PATO_EXT:biological_localization_process_or_quality denotes localization
T25703 1146-1150 PR_EXT:E2F denotes E2fs
T25704 1154-1169 GO_RO_EXT:developmental_differentiation_process denotes differentiating
T25705 1170-1176 UBERON_EXT:muscle_structure_or_tissue denotes muscle
T25706 1184-1188 PR_EXT:000006856 denotes E2f5
T25707 1207-1214 GO:0005634 denotes nucleus
T25708 1218-1227 GO:0005737 denotes cytoplasm
T25709 1235-1239 PR_EXT:000006855 denotes E2f4
T25710 1312-1317 PR_EXT:000028775 denotes E2f3a
T25711 1335-1341 UBERON:0000966 denotes retina
T25712 1400-1402 PR_EXT:000013773 denotes Rb
T25713 1432-1437 PR_EXT:000028775 denotes E2f3a
T25714 1491-1506 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T25715 1515-1520 PR_EXT:000028775 denotes E2f3a

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T25603 9-14 PR:000028775 denotes E2f3a
T25604 70-78 SO:0001060 denotes isoforms
T25605 127-132 PR:000028775 denotes E2f3a
T25606 192-195 SO:0001528 denotes NLS
T25607 243-245 PR:000013773 denotes Rb
T25608 254-261 SO:0000417 denotes domains
T25609 334-341 UBERON:0000966 denotes retinal
T25610 334-347 CL:0009004 denotes retinal cells
T25611 349-354 PR:000028775 denotes E2f3a
T25612 363-370 GO:0005634 denotes nuclear
T25613 375-386 GO:0005737 denotes cytoplasmic
T25614 408-415 GO:0005634 denotes nuclear
T25615 462-467 PR:000028775 denotes E2f3a
T25616 540-544 PR:000006852 denotes E2f1
T25617 546-550 PR:000006853 denotes E2f2
T25618 556-561 PR:000028775 denotes E2f3a
T25619 568-573 PR:000005115 denotes Ccna2
T25620 649-656 GO:0051320 denotes S-phase
T25621 704-710 SO:0000417 denotes domain
T25622 725-734 GO:0065007 denotes regulated
T25623 738-743 PR:000005115 denotes Ccna2
T25624 757-763 SO:0000417 denotes domain
T25625 829-831 PR:000013773 denotes Rb
T25626 938-940 PR:000013773 denotes Rb
T25627 945-950 PR:000016269 denotes Tfdp1
T25628 964-975 GO:0005737 denotes cytoplasmic
T25629 979-986 UBERON:0000966 denotes retinal
T25630 979-992 CL:0009004 denotes retinal cells
T25631 1031-1033 PR:000013773 denotes Rb
T25632 1038-1042 PR:000006854 denotes E2f3
T25633 1061-1070 GO:0042995 denotes processes
T25634 1076-1083 GO:0005634 denotes nuclear
T25635 1184-1188 PR:000006856 denotes E2f5
T25636 1207-1214 GO:0005634 denotes nucleus
T25637 1218-1227 GO:0005737 denotes cytoplasm
T25638 1235-1239 PR:000006855 denotes E2f4
T25639 1312-1317 PR:000028775 denotes E2f3a
T25640 1335-1341 UBERON:0000966 denotes retina
T25641 1400-1402 PR:000013773 denotes Rb
T25642 1432-1437 PR:000028775 denotes E2f3a
T25643 1515-1520 PR:000028775 denotes E2f3a

2_test

Id Subject Object Predicate Lexical cue
17608565-10779352-84869025 263-265 10779352 denotes 16
17608565-8033208-84869026 658-660 8033208 denotes 64
17608565-7969176-84869027 661-663 7969176 denotes 65
17608565-11980909-84869028 745-747 11980909 denotes 18
17608565-9144196-84869029 894-896 9144196 denotes 20
17608565-9271426-84869029 894-896 9271426 denotes 20
17608565-9372959-84869029 894-896 9372959 denotes 20
17608565-10725332-84869030 1270-1272 10725332 denotes 23
T70038 263-265 10779352 denotes 16
T93814 658-660 8033208 denotes 64
T18238 661-663 7969176 denotes 65
T97278 745-747 11980909 denotes 18
T66114 894-896 9144196 denotes 20
T4989 894-896 9271426 denotes 20
T40985 894-896 9372959 denotes 20
T9363 1270-1272 10725332 denotes 23