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Id Subject Object Predicate Lexical cue
T21518 118-119 -RRB- denotes )
T21519 119-120 . denotes .
T21520 120-223 sentence denotes The genotyping strategy outlined in Figure 7A was used to distinguish the E2f3a, WT, and null alleles.
T21495 0-2 TO denotes To
T21496 3-7 VB denotes test
T21497 84-93 VBD denotes exploited
T21498 8-13 WDT denotes which
T21499 19-26 NN denotes isoform
T21500 14-18 NN denotes E2f3
T21501 27-29 VBZ denotes is
T21502 30-41 JJ denotes responsible
T21503 42-45 IN denotes for
T21504 46-54 JJ denotes aberrant
T21505 65-80 NN denotes differentiation
T21506 55-57 NN denotes Rb
T21507 58-60 NN denotes KO
T21508 61-64 NN denotes SAC
T21509 81-83 PRP denotes we
T21510 94-99 NN denotes E2f3a
T21511 103-107 NNS denotes mice
T21512 99-100 SYM denotes −
T21513 100-101 HYPH denotes /
T21514 101-102 SYM denotes −
T21515 108-109 -LRB- denotes (
T21516 116-118 NN denotes 7A
T21517 109-115 NN denotes Figure
T21521 121-124 DT denotes The
T21522 136-144 NN denotes strategy
T21523 125-135 NN denotes genotyping
T21524 171-175 VBN denotes used
T21525 145-153 VBN denotes outlined
T21526 154-156 IN denotes in
T21527 157-163 NN denotes Figure
T21528 164-166 NN denotes 7A
T21529 167-170 VBD denotes was
T21530 176-178 TO denotes to
T21531 179-190 VB denotes distinguish
T21532 191-194 DT denotes the
T21533 215-222 NNS denotes alleles
T21534 195-200 NN denotes E2f3a
T21535 200-202 , denotes ,
T21536 202-204 NN denotes WT
T21537 204-206 , denotes ,
T21538 206-209 CC denotes and
T21539 210-214 JJ denotes null
T21540 222-223 . denotes .
T21541 223-420 sentence denotes Reverse transcriptase PCR (RT-PCR) confirmed the presence of both E2f3a and E2f3b RNA species in the developing WT retina, and the specific absence of E2f3a RNA in the E2f3a−/− retina (Figure 7B).
T21542 224-231 JJ denotes Reverse
T21543 246-249 NN denotes PCR
T21544 232-245 NN denotes transcriptase
T21545 259-268 VBD denotes confirmed
T21546 250-251 -LRB- denotes (
T21547 251-253 NN denotes RT
T21548 254-257 NN denotes PCR
T21549 253-254 HYPH denotes -
T21550 257-258 -RRB- denotes )
T21551 269-272 DT denotes the
T21552 273-281 NN denotes presence
T21553 282-284 IN denotes of
T21554 285-289 CC denotes both
T21555 290-295 NN denotes E2f3a
T21556 310-317 NNS denotes species
T21557 296-299 CC denotes and
T21558 300-305 NN denotes E2f3b
T21559 306-309 NN denotes RNA
T21560 318-320 IN denotes in
T21561 321-324 DT denotes the
T21562 339-345 NN denotes retina
T21563 325-335 VBG denotes developing
T21564 336-338 NN denotes WT
T21565 345-347 , denotes ,
T21566 347-350 CC denotes and
T21567 351-354 DT denotes the
T21568 364-371 NN denotes absence
T21569 355-363 JJ denotes specific
T21570 372-374 IN denotes of
T21571 375-380 NN denotes E2f3a
T21572 381-384 NN denotes RNA
T21573 385-387 IN denotes in
T21574 388-391 DT denotes the
T21575 401-407 NN denotes retina
T21576 392-397 NN denotes E2f3a
T21577 397-398 SYM denotes −
T21578 398-399 HYPH denotes /
T21579 399-400 SYM denotes −
T21580 408-409 -LRB- denotes (
T21581 416-418 NN denotes 7B
T21582 409-415 NN denotes Figure
T21583 418-419 -RRB- denotes )
T21584 419-420 . denotes .
T21585 420-492 sentence denotes E2f3a protein was absent in E2f3a−/− retinal lysate (Figures 6 and S8).
T21586 421-426 NN denotes E2f3a
T21587 427-434 NN denotes protein
T21588 435-438 VBD denotes was
T21589 439-445 JJ denotes absent
T21590 446-448 IN denotes in
T21591 449-454 NN denotes E2f3a
T21592 466-472 NN denotes lysate
T21593 454-455 SYM denotes −
T21594 455-456 HYPH denotes /
T21595 456-457 SYM denotes −
T21596 458-465 JJ denotes retinal
T21597 473-474 -LRB- denotes (
T21598 488-490 NN denotes S8
T21599 474-481 NNS denotes Figures
T21600 482-483 CD denotes 6
T21601 484-487 CC denotes and
T21602 490-491 -RRB- denotes )
T21603 491-492 . denotes .
T21604 492-713 sentence denotes Importantly, the levels of E2f3b message were similar in the Rb KO and Rb/E2f3a DKO retina, ruling out the possibility that any effects of E2f3a deletion we might observe were due to down-regulation of E2f3b (Figure 7C).
T21605 493-504 RB denotes Importantly
T21606 534-538 VBD denotes were
T21607 504-506 , denotes ,
T21608 506-509 DT denotes the
T21609 510-516 NNS denotes levels
T21610 517-519 IN denotes of
T21611 520-525 NN denotes E2f3b
T21612 526-533 NN denotes message
T21613 539-546 JJ denotes similar
T21614 547-549 IN denotes in
T21615 550-553 DT denotes the
T21616 577-583 NN denotes retina
T21617 554-556 NN denotes Rb
T21618 557-559 NN denotes KO
T21619 560-563 CC denotes and
T21620 564-566 NN denotes Rb
T21621 567-572 NN denotes E2f3a
T21622 566-567 HYPH denotes /
T21623 573-576 NN denotes DKO
T21624 583-585 , denotes ,
T21625 585-591 VBG denotes ruling
T21626 592-595 RP denotes out
T21627 596-599 DT denotes the
T21628 600-611 NN denotes possibility
T21629 612-616 IN denotes that
T21630 664-668 VBD denotes were
T21631 617-620 DT denotes any
T21632 621-628 NNS denotes effects
T21633 629-631 IN denotes of
T21634 632-637 NN denotes E2f3a
T21635 638-646 NN denotes deletion
T21636 647-649 PRP denotes we
T21637 656-663 VB denotes observe
T21638 650-655 MD denotes might
T21639 669-672 IN denotes due
T21640 673-675 IN denotes to
T21641 676-680 JJ denotes down
T21642 681-691 NN denotes regulation
T21643 680-681 HYPH denotes -
T21644 692-694 IN denotes of
T21645 695-700 NN denotes E2f3b
T21646 701-702 -LRB- denotes (
T21647 709-711 NN denotes 7C
T21648 702-708 NN denotes Figure
T21649 711-712 -RRB- denotes )
T21650 712-713 . denotes .
T21651 713-868 sentence denotes Also, the levels of other E2fs were the same in the Rb KO, Rb/E2f3 DKO, and Rb/E2f3a DKO retina, ruling out any cross-regulatory effects (Figure 7C) [55].
T21652 714-718 RB denotes Also
T21653 745-749 VBD denotes were
T21654 718-720 , denotes ,
T21655 720-723 DT denotes the
T21656 724-730 NNS denotes levels
T21657 731-733 IN denotes of
T21658 734-739 JJ denotes other
T21659 740-744 NNS denotes E2fs
T21660 750-753 DT denotes the
T21661 754-758 JJ denotes same
T21662 759-761 IN denotes in
T21663 762-765 DT denotes the
T21664 803-809 NN denotes retina
T21665 766-768 NN denotes Rb
T21666 769-771 NN denotes KO
T21667 771-773 , denotes ,
T21668 773-775 NN denotes Rb
T21669 776-780 NN denotes E2f3
T21670 775-776 HYPH denotes /
T21671 781-784 NN denotes DKO
T21672 784-786 , denotes ,
T21673 786-789 CC denotes and
T21674 790-792 NN denotes Rb
T21675 793-798 NN denotes E2f3a
T21676 792-793 HYPH denotes /
T21677 799-802 NN denotes DKO
T21678 809-811 , denotes ,
T21679 811-817 VBG denotes ruling
T21680 818-821 RP denotes out
T21681 822-825 DT denotes any
T21682 843-850 NNS denotes effects
T21683 826-831 RB denotes cross
T21684 832-842 JJ denotes regulatory
T21685 831-832 HYPH denotes -
T21686 851-852 -LRB- denotes (
T21687 859-861 NN denotes 7C
T21688 852-858 NN denotes Figure
T21689 861-862 -RRB- denotes )
T21690 863-864 -LRB- denotes [
T21691 864-866 CD denotes 55
T21692 866-867 -RRB- denotes ]
T21693 867-868 . denotes .
T21694 868-1153 sentence denotes E2f3a can trigger cell cycle induction, but because SAC defects are not linked to cell cycle perturbation (Figures 3A and 4), and in view of the predominant association between E2f3b and Rb in quiescent cells [16,19], we suspected that E2f3b may perturb differentiation in Rb KO SACs.
T21695 869-874 NN denotes E2f3a
T21696 879-886 VB denotes trigger
T21697 875-878 MD denotes can
T21698 887-891 NN denotes cell
T21699 892-897 NN denotes cycle
T21700 898-907 NN denotes induction
T21701 907-909 , denotes ,
T21702 909-912 CC denotes but
T21703 913-920 IN denotes because
T21704 941-947 VBN denotes linked
T21705 921-924 NN denotes SAC
T21706 925-932 NNS denotes defects
T21707 933-936 VBP denotes are
T21708 937-940 RB denotes not
T21709 1090-1099 VBD denotes suspected
T21710 948-950 IN denotes to
T21711 951-955 NN denotes cell
T21712 956-961 NN denotes cycle
T21713 962-974 NN denotes perturbation
T21714 975-976 -LRB- denotes (
T21715 984-986 NN denotes 3A
T21716 976-983 NNS denotes Figures
T21717 987-990 CC denotes and
T21718 991-992 CD denotes 4
T21719 992-993 -RRB- denotes )
T21720 993-995 , denotes ,
T21721 995-998 CC denotes and
T21722 999-1001 IN denotes in
T21723 1002-1006 NN denotes view
T21724 1007-1009 IN denotes of
T21725 1010-1013 DT denotes the
T21726 1026-1037 NN denotes association
T21727 1014-1025 JJ denotes predominant
T21728 1038-1045 IN denotes between
T21729 1046-1051 NN denotes E2f3b
T21730 1052-1055 CC denotes and
T21731 1056-1058 NN denotes Rb
T21732 1059-1061 IN denotes in
T21733 1062-1071 JJ denotes quiescent
T21734 1072-1077 NNS denotes cells
T21735 1078-1079 -LRB- denotes [
T21736 1082-1084 CD denotes 19
T21737 1079-1081 CD denotes 16
T21738 1081-1082 , denotes ,
T21739 1084-1085 -RRB- denotes ]
T21740 1085-1087 , denotes ,
T21741 1087-1089 PRP denotes we
T21742 1100-1104 IN denotes that
T21743 1115-1122 VB denotes perturb
T21744 1105-1110 NN denotes E2f3b
T21745 1111-1114 MD denotes may
T21746 1123-1138 NN denotes differentiation
T21747 1139-1141 IN denotes in
T21748 1142-1144 NN denotes Rb
T21749 1145-1147 NN denotes KO
T21750 1148-1152 NNS denotes SACs
T21751 1152-1153 . denotes .
T21752 1153-1236 sentence denotes Unexpectedly, however, E2f3a deletion suppressed the Rb KO SAC defect (Figure 7D).
T21753 1154-1166 RB denotes Unexpectedly
T21754 1192-1202 VBD denotes suppressed
T21755 1166-1168 , denotes ,
T21756 1168-1175 RB denotes however
T21757 1175-1177 , denotes ,
T21758 1177-1182 NN denotes E2f3a
T21759 1183-1191 NN denotes deletion
T21760 1203-1206 DT denotes the
T21761 1217-1223 NN denotes defect
T21762 1207-1209 NN denotes Rb
T21763 1210-1212 NN denotes KO
T21764 1213-1216 NN denotes SAC
T21765 1224-1225 -LRB- denotes (
T21766 1232-1234 NN denotes 7D
T21767 1225-1231 NN denotes Figure
T21768 1234-1235 -RRB- denotes )
T21769 1235-1236 . denotes .
T21770 1236-1366 sentence denotes Thus, separate from its role in cell cycle control, Rb regulation of E2f3a is critical to ensure proper neuronal differentiation.
T21771 1237-1241 RB denotes Thus
T21772 1312-1314 VBZ denotes is
T21773 1241-1243 , denotes ,
T21774 1243-1251 JJ denotes separate
T21775 1252-1256 IN denotes from
T21776 1257-1260 PRP$ denotes its
T21777 1261-1265 NN denotes role
T21778 1266-1268 IN denotes in
T21779 1269-1273 NN denotes cell
T21780 1274-1279 NN denotes cycle
T21781 1280-1287 NN denotes control
T21782 1287-1289 , denotes ,
T21783 1289-1291 NN denotes Rb
T21784 1292-1302 NN denotes regulation
T21785 1303-1305 IN denotes of
T21786 1306-1311 NN denotes E2f3a
T21787 1315-1323 JJ denotes critical
T21788 1324-1326 TO denotes to
T21789 1327-1333 VB denotes ensure
T21790 1334-1340 JJ denotes proper
T21791 1350-1365 NN denotes differentiation
T21792 1341-1349 JJ denotes neuronal
T21793 1365-1366 . denotes .
R6326 T21495 T21496 aux To,test
R6327 T21496 T21497 advcl test,exploited
R6328 T21498 T21499 det which,isoform
R6329 T21499 T21501 dep isoform,is
R6330 T21500 T21499 compound E2f3,isoform
R6331 T21501 T21496 ccomp is,test
R6332 T21502 T21501 acomp responsible,is
R6333 T21503 T21502 prep for,responsible
R6334 T21504 T21505 amod aberrant,differentiation
R6335 T21505 T21503 pobj differentiation,for
R6336 T21506 T21507 compound Rb,KO
R6337 T21507 T21505 compound KO,differentiation
R6338 T21508 T21505 compound SAC,differentiation
R6339 T21509 T21497 nsubj we,exploited
R6340 T21510 T21511 nmod E2f3a,mice
R6341 T21511 T21497 dobj mice,exploited
R6342 T21512 T21510 punct −,E2f3a
R6343 T21513 T21510 punct /,E2f3a
R6344 T21514 T21510 punct −,E2f3a
R6345 T21515 T21516 punct (,7A
R6346 T21516 T21497 parataxis 7A,exploited
R6347 T21517 T21516 compound Figure,7A
R6348 T21518 T21516 punct ),7A
R6349 T21519 T21497 punct .,exploited
R6350 T21521 T21522 det The,strategy
R6351 T21522 T21524 nsubjpass strategy,used
R6352 T21523 T21522 compound genotyping,strategy
R6353 T21525 T21522 acl outlined,strategy
R6354 T21526 T21525 prep in,outlined
R6355 T21527 T21528 compound Figure,7A
R6356 T21528 T21526 pobj 7A,in
R6357 T21529 T21524 auxpass was,used
R6358 T21530 T21531 aux to,distinguish
R6359 T21531 T21524 advcl distinguish,used
R6360 T21532 T21533 det the,alleles
R6361 T21533 T21531 dobj alleles,distinguish
R6362 T21534 T21533 nmod E2f3a,alleles
R6363 T21535 T21534 punct ", ",E2f3a
R6364 T21536 T21534 conj WT,E2f3a
R6365 T21537 T21536 punct ", ",WT
R6366 T21538 T21536 cc and,WT
R6367 T21539 T21536 conj null,WT
R6368 T21540 T21524 punct .,used
R6369 T21542 T21543 amod Reverse,PCR
R6370 T21543 T21545 nsubj PCR,confirmed
R6371 T21544 T21543 compound transcriptase,PCR
R6372 T21546 T21543 punct (,PCR
R6373 T21547 T21548 compound RT,PCR
R6374 T21548 T21543 appos PCR,PCR
R6375 T21549 T21548 punct -,PCR
R6376 T21550 T21545 punct ),confirmed
R6377 T21551 T21552 det the,presence
R6378 T21552 T21545 dobj presence,confirmed
R6379 T21553 T21552 prep of,presence
R6380 T21554 T21555 preconj both,E2f3a
R6381 T21555 T21556 nmod E2f3a,species
R6382 T21556 T21553 pobj species,of
R6383 T21557 T21555 cc and,E2f3a
R6384 T21558 T21555 conj E2f3b,E2f3a
R6385 T21559 T21556 compound RNA,species
R6386 T21560 T21552 prep in,presence
R6387 T21561 T21562 det the,retina
R6388 T21562 T21560 pobj retina,in
R6389 T21563 T21562 amod developing,retina
R6390 T21564 T21562 compound WT,retina
R6391 T21565 T21552 punct ", ",presence
R6392 T21566 T21552 cc and,presence
R6393 T21567 T21568 det the,absence
R6394 T21568 T21552 conj absence,presence
R6395 T21569 T21568 amod specific,absence
R6396 T21570 T21568 prep of,absence
R6397 T21571 T21572 compound E2f3a,RNA
R6398 T21572 T21570 pobj RNA,of
R6399 T21573 T21568 prep in,absence
R6400 T21574 T21575 det the,retina
R6401 T21575 T21573 pobj retina,in
R6402 T21576 T21575 nmod E2f3a,retina
R6403 T21577 T21576 punct −,E2f3a
R6404 T21578 T21576 punct /,E2f3a
R6405 T21579 T21576 punct −,E2f3a
R6406 T21580 T21581 punct (,7B
R6407 T21581 T21545 parataxis 7B,confirmed
R6408 T21582 T21581 compound Figure,7B
R6409 T21583 T21581 punct ),7B
R6410 T21584 T21545 punct .,confirmed
R6411 T21586 T21587 compound E2f3a,protein
R6412 T21587 T21588 nsubj protein,was
R6413 T21589 T21588 acomp absent,was
R6414 T21590 T21588 prep in,was
R6415 T21591 T21592 nmod E2f3a,lysate
R6416 T21592 T21590 pobj lysate,in
R6417 T21593 T21591 punct −,E2f3a
R6418 T21594 T21591 punct /,E2f3a
R6419 T21595 T21591 punct −,E2f3a
R6420 T21596 T21592 amod retinal,lysate
R6421 T21597 T21598 punct (,S8
R6422 T21598 T21588 parataxis S8,was
R6423 T21599 T21598 nmod Figures,S8
R6424 T21600 T21598 nummod 6,S8
R6425 T21601 T21598 cc and,S8
R6426 T21602 T21598 punct ),S8
R6427 T21603 T21588 punct .,was
R6428 T21605 T21606 advmod Importantly,were
R6429 T21607 T21606 punct ", ",were
R6430 T21608 T21609 det the,levels
R6431 T21609 T21606 nsubj levels,were
R6432 T21610 T21609 prep of,levels
R6433 T21611 T21612 compound E2f3b,message
R6434 T21612 T21610 pobj message,of
R6435 T21613 T21606 acomp similar,were
R6436 T21614 T21606 prep in,were
R6437 T21615 T21616 det the,retina
R6438 T21616 T21614 pobj retina,in
R6439 T21617 T21618 nmod Rb,KO
R6440 T21618 T21616 nmod KO,retina
R6441 T21619 T21618 cc and,KO
R6442 T21620 T21621 compound Rb,E2f3a
R6443 T21621 T21623 compound E2f3a,DKO
R6444 T21622 T21621 punct /,E2f3a
R6445 T21623 T21618 conj DKO,KO
R6446 T21624 T21606 punct ", ",were
R6447 T21625 T21606 advcl ruling,were
R6448 T21626 T21625 prt out,ruling
R6449 T21627 T21628 det the,possibility
R6450 T21628 T21625 dobj possibility,ruling
R6451 T21629 T21630 mark that,were
R6452 T21630 T21628 acl were,possibility
R6453 T21631 T21632 det any,effects
R6454 T21632 T21630 nsubj effects,were
R6455 T21633 T21632 prep of,effects
R6456 T21634 T21635 compound E2f3a,deletion
R6457 T21635 T21633 pobj deletion,of
R6458 T21636 T21637 nsubj we,observe
R6459 T21637 T21632 advcl observe,effects
R6460 T21638 T21637 aux might,observe
R6461 T21639 T21630 prep due,were
R6462 T21640 T21639 pcomp to,due
R6463 T21641 T21642 amod down,regulation
R6464 T21642 T21639 pobj regulation,due
R6465 T21643 T21642 punct -,regulation
R6466 T21644 T21642 prep of,regulation
R6467 T21645 T21644 pobj E2f3b,of
R6468 T21646 T21647 punct (,7C
R6469 T21647 T21630 parataxis 7C,were
R6470 T21648 T21647 compound Figure,7C
R6471 T21649 T21647 punct ),7C
R6472 T21650 T21606 punct .,were
R6473 T21652 T21653 advmod Also,were
R6474 T21654 T21653 punct ", ",were
R6475 T21655 T21656 det the,levels
R6476 T21656 T21653 nsubj levels,were
R6477 T21657 T21656 prep of,levels
R6478 T21658 T21659 amod other,E2fs
R6479 T21659 T21657 pobj E2fs,of
R6480 T21660 T21661 det the,same
R6481 T21661 T21653 attr same,were
R6482 T21662 T21661 prep in,same
R6483 T21663 T21664 det the,retina
R6484 T21664 T21662 pobj retina,in
R6485 T21665 T21666 nmod Rb,KO
R6486 T21666 T21664 nmod KO,retina
R6487 T21667 T21666 punct ", ",KO
R6488 T21668 T21669 compound Rb,E2f3
R6489 T21669 T21671 compound E2f3,DKO
R6490 T21670 T21669 punct /,E2f3
R6491 T21671 T21666 conj DKO,KO
R6492 T21672 T21671 punct ", ",DKO
R6493 T21673 T21671 cc and,DKO
R6494 T21674 T21675 compound Rb,E2f3a
R6495 T21675 T21677 compound E2f3a,DKO
R6496 T21676 T21675 punct /,E2f3a
R6497 T21677 T21671 conj DKO,DKO
R6498 T21678 T21653 punct ", ",were
R6499 T21679 T21653 advcl ruling,were
R6500 T21680 T21679 prt out,ruling
R6501 T21681 T21682 det any,effects
R6502 T21682 T21679 dobj effects,ruling
R6503 T21683 T21684 advmod cross,regulatory
R6504 T21684 T21682 amod regulatory,effects
R6505 T21685 T21684 punct -,regulatory
R6506 T21686 T21687 punct (,7C
R6507 T21687 T21653 parataxis 7C,were
R6508 T21688 T21687 compound Figure,7C
R6509 T21689 T21687 punct ),7C
R6510 T21690 T21691 punct [,55
R6511 T21691 T21653 parataxis 55,were
R6512 T21692 T21691 punct ],55
R6513 T21693 T21653 punct .,were
R6514 T21695 T21696 nsubj E2f3a,trigger
R6515 T21697 T21696 aux can,trigger
R6516 T21698 T21699 compound cell,cycle
R6517 T21699 T21700 compound cycle,induction
R6518 T21700 T21696 dobj induction,trigger
R6519 T21701 T21696 punct ", ",trigger
R6520 T21702 T21696 cc but,trigger
R6521 T21703 T21704 mark because,linked
R6522 T21704 T21709 advcl linked,suspected
R6523 T21705 T21706 compound SAC,defects
R6524 T21706 T21704 nsubjpass defects,linked
R6525 T21707 T21704 auxpass are,linked
R6526 T21708 T21704 neg not,linked
R6527 T21709 T21696 conj suspected,trigger
R6528 T21710 T21704 prep to,linked
R6529 T21711 T21712 compound cell,cycle
R6530 T21712 T21713 compound cycle,perturbation
R6531 T21713 T21710 pobj perturbation,to
R6532 T21714 T21715 punct (,3A
R6533 T21715 T21704 parataxis 3A,linked
R6534 T21716 T21715 compound Figures,3A
R6535 T21717 T21715 cc and,3A
R6536 T21718 T21715 conj 4,3A
R6537 T21719 T21715 punct ),3A
R6538 T21720 T21704 punct ", ",linked
R6539 T21721 T21704 cc and,linked
R6540 T21722 T21704 conj in,linked
R6541 T21723 T21722 pobj view,in
R6542 T21724 T21723 prep of,view
R6543 T21725 T21726 det the,association
R6544 T21726 T21724 pobj association,of
R6545 T21727 T21726 amod predominant,association
R6546 T21728 T21726 prep between,association
R6547 T21729 T21728 pobj E2f3b,between
R6548 T21730 T21729 cc and,E2f3b
R6549 T21731 T21729 conj Rb,E2f3b
R6550 T21732 T21726 prep in,association
R6551 T21733 T21734 amod quiescent,cells
R6552 T21734 T21732 pobj cells,in
R6553 T21735 T21736 punct [,19
R6554 T21736 T21726 parataxis 19,association
R6555 T21737 T21736 nummod 16,19
R6556 T21738 T21736 punct ",",19
R6557 T21739 T21736 punct ],19
R6558 T21740 T21709 punct ", ",suspected
R6559 T21741 T21709 nsubj we,suspected
R6560 T21742 T21743 mark that,perturb
R6561 T21743 T21709 ccomp perturb,suspected
R6562 T21744 T21743 nsubj E2f3b,perturb
R6563 T21745 T21743 aux may,perturb
R6564 T21746 T21743 dobj differentiation,perturb
R6565 T21747 T21743 prep in,perturb
R6566 T21748 T21749 compound Rb,KO
R6567 T21749 T21750 compound KO,SACs
R6568 T21750 T21747 pobj SACs,in
R6569 T21751 T21709 punct .,suspected
R6570 T21753 T21754 advmod Unexpectedly,suppressed
R6571 T21755 T21754 punct ", ",suppressed
R6572 T21756 T21754 advmod however,suppressed
R6573 T21757 T21754 punct ", ",suppressed
R6574 T21758 T21759 compound E2f3a,deletion
R6575 T21759 T21754 nsubj deletion,suppressed
R6576 T21760 T21761 det the,defect
R6577 T21761 T21754 dobj defect,suppressed
R6578 T21762 T21763 compound Rb,KO
R6579 T21763 T21761 compound KO,defect
R6580 T21764 T21761 compound SAC,defect
R6581 T21765 T21766 punct (,7D
R6582 T21766 T21754 parataxis 7D,suppressed
R6583 T21767 T21766 compound Figure,7D
R6584 T21768 T21766 punct ),7D
R6585 T21769 T21754 punct .,suppressed
R6586 T21771 T21772 advmod Thus,is
R6587 T21773 T21772 punct ", ",is
R6588 T21774 T21772 advcl separate,is
R6589 T21775 T21774 prep from,separate
R6590 T21776 T21777 poss its,role
R6591 T21777 T21775 pobj role,from
R6592 T21778 T21777 prep in,role
R6593 T21779 T21780 compound cell,cycle
R6594 T21780 T21781 compound cycle,control
R6595 T21781 T21778 pobj control,in
R6596 T21782 T21772 punct ", ",is
R6597 T21783 T21784 compound Rb,regulation
R6598 T21784 T21772 nsubj regulation,is
R6599 T21785 T21784 prep of,regulation
R6600 T21786 T21785 pobj E2f3a,of
R6601 T21787 T21772 acomp critical,is
R6602 T21788 T21789 aux to,ensure
R6603 T21789 T21772 advcl ensure,is
R6604 T21790 T21791 amod proper,differentiation
R6605 T21791 T21789 dobj differentiation,ensure
R6606 T21792 T21791 amod neuronal,differentiation
R6607 T21793 T21772 punct .,is

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T21433 224-245 GO_EXT:0003964 denotes Reverse transcriptase
T21421 14-18 PR_EXT:000006854 denotes E2f3
T21422 19-26 SO_EXT:0001060 denotes isoform
T21423 55-57 PR_EXT:000013773 denotes Rb
T21424 65-80 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T21425 94-99 PR_EXT:000028775 denotes E2f3a
T21426 99-100 SO_EXT:sequence_nullness_or_absence denotes −
T21427 101-102 SO_EXT:sequence_nullness_or_absence denotes −
T21428 103-107 NCBITaxon:10088 denotes mice
T21429 195-200 PR_EXT:000028775 denotes E2f3a
T21430 202-204 SO_EXT:wild_type_entity_or_quality denotes WT
T21431 210-214 SO_EXT:sequence_nullness denotes null
T21432 215-222 SO_EXT:0001023 denotes alleles
T21434 251-253 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T21435 290-295 PR_EXT:000028775 denotes E2f3a
T21436 306-309 CHEBI_SO_EXT:RNA denotes RNA
T21437 336-338 SO_EXT:wild_type_entity_or_quality denotes WT
T21438 339-345 UBERON:0000966 denotes retina
T21439 375-380 PR_EXT:000028775 denotes E2f3a
T21440 381-384 CHEBI_SO_EXT:RNA denotes RNA
T21441 392-397 PR_EXT:000028775 denotes E2f3a
T21442 397-398 SO_EXT:sequence_nullness_or_absence denotes −
T21443 399-400 SO_EXT:sequence_nullness_or_absence denotes −
T21444 401-407 UBERON:0000966 denotes retina
T21445 421-426 PR_EXT:000028775 denotes E2f3a
T21446 427-434 CHEBI_PR_EXT:protein denotes protein
T21447 449-454 PR_EXT:000028775 denotes E2f3a
T21448 454-455 SO_EXT:sequence_nullness_or_absence denotes −
T21449 456-457 SO_EXT:sequence_nullness_or_absence denotes −
T21450 458-465 UBERON:0000966 denotes retinal
T21451 526-533 SO_EXT:0000673 denotes message
T21452 526-533 CHEBI:33695 denotes message
T21453 554-556 PR_EXT:000013773 denotes Rb
T21454 564-566 PR_EXT:000013773 denotes Rb
T21455 567-572 PR_EXT:000028775 denotes E2f3a
T21456 577-583 UBERON:0000966 denotes retina
T21457 632-637 PR_EXT:000028775 denotes E2f3a
T21458 638-646 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T21459 676-691 GO_EXT:negative_regulation denotes down-regulation
T21460 740-744 PR_EXT:E2F denotes E2fs
T21461 766-768 PR_EXT:000013773 denotes Rb
T21462 773-775 PR_EXT:000013773 denotes Rb
T21463 776-780 PR_EXT:000006854 denotes E2f3
T21464 790-792 PR_EXT:000013773 denotes Rb
T21465 793-798 PR_EXT:000028775 denotes E2f3a
T21466 803-809 UBERON:0000966 denotes retina
T21467 832-842 GO:0065007 denotes regulatory
T21468 869-874 PR_EXT:000028775 denotes E2f3a
T21469 887-891 CL_GO_EXT:cell denotes cell
T21470 887-897 GO:0007049 denotes cell cycle
T21471 951-955 CL_GO_EXT:cell denotes cell
T21472 951-961 GO:0007049 denotes cell cycle
T21473 1056-1058 PR_EXT:000013773 denotes Rb
T21474 1062-1071 GO:0044838 denotes quiescent
T21475 1072-1077 CL_GO_EXT:cell denotes cells
T21476 1123-1138 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T21477 1142-1144 PR_EXT:000013773 denotes Rb
T21478 1177-1182 PR_EXT:000028775 denotes E2f3a
T21479 1183-1191 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T21480 1207-1209 PR_EXT:000013773 denotes Rb
T21481 1269-1273 CL_GO_EXT:cell denotes cell
T21482 1269-1287 GO:0051726 denotes cell cycle control
T21483 1289-1291 PR_EXT:000013773 denotes Rb
T21484 1292-1302 GO:0065007 denotes regulation
T21485 1306-1311 PR_EXT:000028775 denotes E2f3a
T21486 1341-1349 CL:0000540 denotes neuronal
T21487 1350-1365 GO_RO_EXT:developmental_differentiation_process denotes differentiation

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T21375 14-18 PR:000006854 denotes E2f3
T21376 19-26 SO:0001060 denotes isoform
T21377 55-57 PR:000013773 denotes Rb
T21378 94-99 PR:000028775 denotes E2f3a
T21379 103-107 NCBITaxon:10088 denotes mice
T21380 195-200 PR:000028775 denotes E2f3a
T21381 215-222 SO:0001023 denotes alleles
T21382 290-295 PR:000028775 denotes E2f3a
T21383 339-345 UBERON:0000966 denotes retina
T21384 375-380 PR:000028775 denotes E2f3a
T21385 392-397 PR:000028775 denotes E2f3a
T21386 401-407 UBERON:0000966 denotes retina
T21387 421-426 PR:000028775 denotes E2f3a
T21388 449-454 PR:000028775 denotes E2f3a
T21389 458-465 UBERON:0000966 denotes retinal
T21390 526-533 SO:0000673 denotes message
T21391 526-533 CHEBI:33695 denotes message
T21392 554-556 PR:000013773 denotes Rb
T21393 564-566 PR:000013773 denotes Rb
T21394 567-572 PR:000028775 denotes E2f3a
T21395 577-583 UBERON:0000966 denotes retina
T21396 632-637 PR:000028775 denotes E2f3a
T21397 766-768 PR:000013773 denotes Rb
T21398 773-775 PR:000013773 denotes Rb
T21399 776-780 PR:000006854 denotes E2f3
T21400 790-792 PR:000013773 denotes Rb
T21401 793-798 PR:000028775 denotes E2f3a
T21402 803-809 UBERON:0000966 denotes retina
T21403 832-842 GO:0065007 denotes regulatory
T21404 869-874 PR:000028775 denotes E2f3a
T21405 887-897 GO:0007049 denotes cell cycle
T21406 951-961 GO:0007049 denotes cell cycle
T21407 1056-1058 PR:000013773 denotes Rb
T21408 1062-1071 GO:0044838 denotes quiescent
T21409 1142-1144 PR:000013773 denotes Rb
T21410 1177-1182 PR:000028775 denotes E2f3a
T21411 1207-1209 PR:000013773 denotes Rb
T21412 1269-1287 GO:0051726 denotes cell cycle control
T21413 1289-1291 PR:000013773 denotes Rb
T21414 1292-1302 GO:0065007 denotes regulation
T21415 1306-1311 PR:000028775 denotes E2f3a
T21416 1341-1349 CL:0000540 denotes neuronal

2_test

Id Subject Object Predicate Lexical cue
17608565-16909124-84869005 864-866 16909124 denotes 55
17608565-10779352-84869006 1079-1081 10779352 denotes 16
17608565-15175242-84869007 1082-1084 15175242 denotes 19
T75502 864-866 16909124 denotes 55
T75730 1079-1081 10779352 denotes 16
T58568 1082-1084 15175242 denotes 19