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Id Subject Object Predicate Lexical cue
T21518 165-166 -RRB- denotes )
T21519 166-167 . denotes .
T21520 167-270 sentence denotes The genotyping strategy outlined in Figure 7A was used to distinguish the E2f3a, WT, and null alleles.
T21488 0-2 NN denotes Rb
T21489 3-12 VBZ denotes Regulates
T21490 13-16 NN denotes SAC
T21491 17-32 NN denotes Differentiation
T21492 33-40 IN denotes through
T21493 41-46 NN denotes E2f3a
T21494 46-167 sentence denotes To test which E2f3 isoform is responsible for aberrant Rb KO SAC differentiation we exploited E2f3a−/− mice (Figure 7A).
T21495 47-49 TO denotes To
T21496 50-54 VB denotes test
T21497 131-140 VBD denotes exploited
T21498 55-60 WDT denotes which
T21499 66-73 NN denotes isoform
T21500 61-65 NN denotes E2f3
T21501 74-76 VBZ denotes is
T21502 77-88 JJ denotes responsible
T21503 89-92 IN denotes for
T21504 93-101 JJ denotes aberrant
T21505 112-127 NN denotes differentiation
T21506 102-104 NN denotes Rb
T21507 105-107 NN denotes KO
T21508 108-111 NN denotes SAC
T21509 128-130 PRP denotes we
T21510 141-146 NN denotes E2f3a
T21511 150-154 NNS denotes mice
T21512 146-147 SYM denotes −
T21513 147-148 HYPH denotes /
T21514 148-149 SYM denotes −
T21515 155-156 -LRB- denotes (
T21516 163-165 NN denotes 7A
T21517 156-162 NN denotes Figure
T21521 168-171 DT denotes The
T21522 183-191 NN denotes strategy
T21523 172-182 NN denotes genotyping
T21524 218-222 VBN denotes used
T21525 192-200 VBN denotes outlined
T21526 201-203 IN denotes in
T21527 204-210 NN denotes Figure
T21528 211-213 NN denotes 7A
T21529 214-217 VBD denotes was
T21530 223-225 TO denotes to
T21531 226-237 VB denotes distinguish
T21532 238-241 DT denotes the
T21533 262-269 NNS denotes alleles
T21534 242-247 NN denotes E2f3a
T21535 247-249 , denotes ,
T21536 249-251 NN denotes WT
T21537 251-253 , denotes ,
T21538 253-256 CC denotes and
T21539 257-261 JJ denotes null
T21540 269-270 . denotes .
T21541 270-467 sentence denotes Reverse transcriptase PCR (RT-PCR) confirmed the presence of both E2f3a and E2f3b RNA species in the developing WT retina, and the specific absence of E2f3a RNA in the E2f3a−/− retina (Figure 7B).
T21542 271-278 JJ denotes Reverse
T21543 293-296 NN denotes PCR
T21544 279-292 NN denotes transcriptase
T21545 306-315 VBD denotes confirmed
T21546 297-298 -LRB- denotes (
T21547 298-300 NN denotes RT
T21548 301-304 NN denotes PCR
T21549 300-301 HYPH denotes -
T21550 304-305 -RRB- denotes )
T21551 316-319 DT denotes the
T21552 320-328 NN denotes presence
T21553 329-331 IN denotes of
T21554 332-336 CC denotes both
T21555 337-342 NN denotes E2f3a
T21556 357-364 NNS denotes species
T21557 343-346 CC denotes and
T21558 347-352 NN denotes E2f3b
T21559 353-356 NN denotes RNA
T21560 365-367 IN denotes in
T21561 368-371 DT denotes the
T21562 386-392 NN denotes retina
T21563 372-382 VBG denotes developing
T21564 383-385 NN denotes WT
T21565 392-394 , denotes ,
T21566 394-397 CC denotes and
T21567 398-401 DT denotes the
T21568 411-418 NN denotes absence
T21569 402-410 JJ denotes specific
T21570 419-421 IN denotes of
T21571 422-427 NN denotes E2f3a
T21572 428-431 NN denotes RNA
T21573 432-434 IN denotes in
T21574 435-438 DT denotes the
T21575 448-454 NN denotes retina
T21576 439-444 NN denotes E2f3a
T21577 444-445 SYM denotes −
T21578 445-446 HYPH denotes /
T21579 446-447 SYM denotes −
T21580 455-456 -LRB- denotes (
T21581 463-465 NN denotes 7B
T21582 456-462 NN denotes Figure
T21583 465-466 -RRB- denotes )
T21584 466-467 . denotes .
T21585 467-539 sentence denotes E2f3a protein was absent in E2f3a−/− retinal lysate (Figures 6 and S8).
T21586 468-473 NN denotes E2f3a
T21587 474-481 NN denotes protein
T21588 482-485 VBD denotes was
T21589 486-492 JJ denotes absent
T21590 493-495 IN denotes in
T21591 496-501 NN denotes E2f3a
T21592 513-519 NN denotes lysate
T21593 501-502 SYM denotes −
T21594 502-503 HYPH denotes /
T21595 503-504 SYM denotes −
T21596 505-512 JJ denotes retinal
T21597 520-521 -LRB- denotes (
T21598 535-537 NN denotes S8
T21599 521-528 NNS denotes Figures
T21600 529-530 CD denotes 6
T21601 531-534 CC denotes and
T21602 537-538 -RRB- denotes )
T21603 538-539 . denotes .
T21604 539-760 sentence denotes Importantly, the levels of E2f3b message were similar in the Rb KO and Rb/E2f3a DKO retina, ruling out the possibility that any effects of E2f3a deletion we might observe were due to down-regulation of E2f3b (Figure 7C).
T21605 540-551 RB denotes Importantly
T21606 581-585 VBD denotes were
T21607 551-553 , denotes ,
T21608 553-556 DT denotes the
T21609 557-563 NNS denotes levels
T21610 564-566 IN denotes of
T21611 567-572 NN denotes E2f3b
T21612 573-580 NN denotes message
T21613 586-593 JJ denotes similar
T21614 594-596 IN denotes in
T21615 597-600 DT denotes the
T21616 624-630 NN denotes retina
T21617 601-603 NN denotes Rb
T21618 604-606 NN denotes KO
T21619 607-610 CC denotes and
T21620 611-613 NN denotes Rb
T21621 614-619 NN denotes E2f3a
T21622 613-614 HYPH denotes /
T21623 620-623 NN denotes DKO
T21624 630-632 , denotes ,
T21625 632-638 VBG denotes ruling
T21626 639-642 RP denotes out
T21627 643-646 DT denotes the
T21628 647-658 NN denotes possibility
T21629 659-663 IN denotes that
T21630 711-715 VBD denotes were
T21631 664-667 DT denotes any
T21632 668-675 NNS denotes effects
T21633 676-678 IN denotes of
T21634 679-684 NN denotes E2f3a
T21635 685-693 NN denotes deletion
T21636 694-696 PRP denotes we
T21637 703-710 VB denotes observe
T21638 697-702 MD denotes might
T21639 716-719 IN denotes due
T21640 720-722 IN denotes to
T21641 723-727 JJ denotes down
T21642 728-738 NN denotes regulation
T21643 727-728 HYPH denotes -
T21644 739-741 IN denotes of
T21645 742-747 NN denotes E2f3b
T21646 748-749 -LRB- denotes (
T21647 756-758 NN denotes 7C
T21648 749-755 NN denotes Figure
T21649 758-759 -RRB- denotes )
T21650 759-760 . denotes .
T21651 760-915 sentence denotes Also, the levels of other E2fs were the same in the Rb KO, Rb/E2f3 DKO, and Rb/E2f3a DKO retina, ruling out any cross-regulatory effects (Figure 7C) [55].
T21652 761-765 RB denotes Also
T21653 792-796 VBD denotes were
T21654 765-767 , denotes ,
T21655 767-770 DT denotes the
T21656 771-777 NNS denotes levels
T21657 778-780 IN denotes of
T21658 781-786 JJ denotes other
T21659 787-791 NNS denotes E2fs
T21660 797-800 DT denotes the
T21661 801-805 JJ denotes same
T21662 806-808 IN denotes in
T21663 809-812 DT denotes the
T21664 850-856 NN denotes retina
T21665 813-815 NN denotes Rb
T21666 816-818 NN denotes KO
T21667 818-820 , denotes ,
T21668 820-822 NN denotes Rb
T21669 823-827 NN denotes E2f3
T21670 822-823 HYPH denotes /
T21671 828-831 NN denotes DKO
T21672 831-833 , denotes ,
T21673 833-836 CC denotes and
T21674 837-839 NN denotes Rb
T21675 840-845 NN denotes E2f3a
T21676 839-840 HYPH denotes /
T21677 846-849 NN denotes DKO
T21678 856-858 , denotes ,
T21679 858-864 VBG denotes ruling
T21680 865-868 RP denotes out
T21681 869-872 DT denotes any
T21682 890-897 NNS denotes effects
T21683 873-878 RB denotes cross
T21684 879-889 JJ denotes regulatory
T21685 878-879 HYPH denotes -
T21686 898-899 -LRB- denotes (
T21687 906-908 NN denotes 7C
T21688 899-905 NN denotes Figure
T21689 908-909 -RRB- denotes )
T21690 910-911 -LRB- denotes [
T21691 911-913 CD denotes 55
T21692 913-914 -RRB- denotes ]
T21693 914-915 . denotes .
T21694 915-1200 sentence denotes E2f3a can trigger cell cycle induction, but because SAC defects are not linked to cell cycle perturbation (Figures 3A and 4), and in view of the predominant association between E2f3b and Rb in quiescent cells [16,19], we suspected that E2f3b may perturb differentiation in Rb KO SACs.
T21695 916-921 NN denotes E2f3a
T21696 926-933 VB denotes trigger
T21697 922-925 MD denotes can
T21698 934-938 NN denotes cell
T21699 939-944 NN denotes cycle
T21700 945-954 NN denotes induction
T21701 954-956 , denotes ,
T21702 956-959 CC denotes but
T21703 960-967 IN denotes because
T21704 988-994 VBN denotes linked
T21705 968-971 NN denotes SAC
T21706 972-979 NNS denotes defects
T21707 980-983 VBP denotes are
T21708 984-987 RB denotes not
T21709 1137-1146 VBD denotes suspected
T21710 995-997 IN denotes to
T21711 998-1002 NN denotes cell
T21712 1003-1008 NN denotes cycle
T21713 1009-1021 NN denotes perturbation
T21714 1022-1023 -LRB- denotes (
T21715 1031-1033 NN denotes 3A
T21716 1023-1030 NNS denotes Figures
T21717 1034-1037 CC denotes and
T21718 1038-1039 CD denotes 4
T21719 1039-1040 -RRB- denotes )
T21720 1040-1042 , denotes ,
T21721 1042-1045 CC denotes and
T21722 1046-1048 IN denotes in
T21723 1049-1053 NN denotes view
T21724 1054-1056 IN denotes of
T21725 1057-1060 DT denotes the
T21726 1073-1084 NN denotes association
T21727 1061-1072 JJ denotes predominant
T21728 1085-1092 IN denotes between
T21729 1093-1098 NN denotes E2f3b
T21730 1099-1102 CC denotes and
T21731 1103-1105 NN denotes Rb
T21732 1106-1108 IN denotes in
T21733 1109-1118 JJ denotes quiescent
T21734 1119-1124 NNS denotes cells
T21735 1125-1126 -LRB- denotes [
T21736 1129-1131 CD denotes 19
T21737 1126-1128 CD denotes 16
T21738 1128-1129 , denotes ,
T21739 1131-1132 -RRB- denotes ]
T21740 1132-1134 , denotes ,
T21741 1134-1136 PRP denotes we
T21742 1147-1151 IN denotes that
T21743 1162-1169 VB denotes perturb
T21744 1152-1157 NN denotes E2f3b
T21745 1158-1161 MD denotes may
T21746 1170-1185 NN denotes differentiation
T21747 1186-1188 IN denotes in
T21748 1189-1191 NN denotes Rb
T21749 1192-1194 NN denotes KO
T21750 1195-1199 NNS denotes SACs
T21751 1199-1200 . denotes .
T21752 1200-1283 sentence denotes Unexpectedly, however, E2f3a deletion suppressed the Rb KO SAC defect (Figure 7D).
T21753 1201-1213 RB denotes Unexpectedly
T21754 1239-1249 VBD denotes suppressed
T21755 1213-1215 , denotes ,
T21756 1215-1222 RB denotes however
T21757 1222-1224 , denotes ,
T21758 1224-1229 NN denotes E2f3a
T21759 1230-1238 NN denotes deletion
T21760 1250-1253 DT denotes the
T21761 1264-1270 NN denotes defect
T21762 1254-1256 NN denotes Rb
T21763 1257-1259 NN denotes KO
T21764 1260-1263 NN denotes SAC
T21765 1271-1272 -LRB- denotes (
T21766 1279-1281 NN denotes 7D
T21767 1272-1278 NN denotes Figure
T21768 1281-1282 -RRB- denotes )
T21769 1282-1283 . denotes .
T21770 1283-1413 sentence denotes Thus, separate from its role in cell cycle control, Rb regulation of E2f3a is critical to ensure proper neuronal differentiation.
T21771 1284-1288 RB denotes Thus
T21772 1359-1361 VBZ denotes is
T21773 1288-1290 , denotes ,
T21774 1290-1298 JJ denotes separate
T21775 1299-1303 IN denotes from
T21776 1304-1307 PRP$ denotes its
T21777 1308-1312 NN denotes role
T21778 1313-1315 IN denotes in
T21779 1316-1320 NN denotes cell
T21780 1321-1326 NN denotes cycle
T21781 1327-1334 NN denotes control
T21782 1334-1336 , denotes ,
T21783 1336-1338 NN denotes Rb
T21784 1339-1349 NN denotes regulation
T21785 1350-1352 IN denotes of
T21786 1353-1358 NN denotes E2f3a
T21787 1362-1370 JJ denotes critical
T21788 1371-1373 TO denotes to
T21789 1374-1380 VB denotes ensure
T21790 1381-1387 JJ denotes proper
T21791 1397-1412 NN denotes differentiation
T21792 1388-1396 JJ denotes neuronal
T21793 1412-1413 . denotes .
R6321 T21488 T21489 nsubj Rb,Regulates
R6322 T21490 T21491 compound SAC,Differentiation
R6323 T21491 T21489 dobj Differentiation,Regulates
R6324 T21492 T21489 prep through,Regulates
R6325 T21493 T21492 pobj E2f3a,through
R6326 T21495 T21496 aux To,test
R6327 T21496 T21497 advcl test,exploited
R6328 T21498 T21499 det which,isoform
R6329 T21499 T21501 dep isoform,is
R6330 T21500 T21499 compound E2f3,isoform
R6331 T21501 T21496 ccomp is,test
R6332 T21502 T21501 acomp responsible,is
R6333 T21503 T21502 prep for,responsible
R6334 T21504 T21505 amod aberrant,differentiation
R6335 T21505 T21503 pobj differentiation,for
R6336 T21506 T21507 compound Rb,KO
R6337 T21507 T21505 compound KO,differentiation
R6338 T21508 T21505 compound SAC,differentiation
R6339 T21509 T21497 nsubj we,exploited
R6340 T21510 T21511 nmod E2f3a,mice
R6341 T21511 T21497 dobj mice,exploited
R6342 T21512 T21510 punct −,E2f3a
R6343 T21513 T21510 punct /,E2f3a
R6344 T21514 T21510 punct −,E2f3a
R6345 T21515 T21516 punct (,7A
R6346 T21516 T21497 parataxis 7A,exploited
R6347 T21517 T21516 compound Figure,7A
R6348 T21518 T21516 punct ),7A
R6349 T21519 T21497 punct .,exploited
R6350 T21521 T21522 det The,strategy
R6351 T21522 T21524 nsubjpass strategy,used
R6352 T21523 T21522 compound genotyping,strategy
R6353 T21525 T21522 acl outlined,strategy
R6354 T21526 T21525 prep in,outlined
R6355 T21527 T21528 compound Figure,7A
R6356 T21528 T21526 pobj 7A,in
R6357 T21529 T21524 auxpass was,used
R6358 T21530 T21531 aux to,distinguish
R6359 T21531 T21524 advcl distinguish,used
R6360 T21532 T21533 det the,alleles
R6361 T21533 T21531 dobj alleles,distinguish
R6362 T21534 T21533 nmod E2f3a,alleles
R6363 T21535 T21534 punct ", ",E2f3a
R6364 T21536 T21534 conj WT,E2f3a
R6365 T21537 T21536 punct ", ",WT
R6366 T21538 T21536 cc and,WT
R6367 T21539 T21536 conj null,WT
R6368 T21540 T21524 punct .,used
R6369 T21542 T21543 amod Reverse,PCR
R6370 T21543 T21545 nsubj PCR,confirmed
R6371 T21544 T21543 compound transcriptase,PCR
R6372 T21546 T21543 punct (,PCR
R6373 T21547 T21548 compound RT,PCR
R6374 T21548 T21543 appos PCR,PCR
R6375 T21549 T21548 punct -,PCR
R6376 T21550 T21545 punct ),confirmed
R6377 T21551 T21552 det the,presence
R6378 T21552 T21545 dobj presence,confirmed
R6379 T21553 T21552 prep of,presence
R6380 T21554 T21555 preconj both,E2f3a
R6381 T21555 T21556 nmod E2f3a,species
R6382 T21556 T21553 pobj species,of
R6383 T21557 T21555 cc and,E2f3a
R6384 T21558 T21555 conj E2f3b,E2f3a
R6385 T21559 T21556 compound RNA,species
R6386 T21560 T21552 prep in,presence
R6387 T21561 T21562 det the,retina
R6388 T21562 T21560 pobj retina,in
R6389 T21563 T21562 amod developing,retina
R6390 T21564 T21562 compound WT,retina
R6391 T21565 T21552 punct ", ",presence
R6392 T21566 T21552 cc and,presence
R6393 T21567 T21568 det the,absence
R6394 T21568 T21552 conj absence,presence
R6395 T21569 T21568 amod specific,absence
R6396 T21570 T21568 prep of,absence
R6397 T21571 T21572 compound E2f3a,RNA
R6398 T21572 T21570 pobj RNA,of
R6399 T21573 T21568 prep in,absence
R6400 T21574 T21575 det the,retina
R6401 T21575 T21573 pobj retina,in
R6402 T21576 T21575 nmod E2f3a,retina
R6403 T21577 T21576 punct −,E2f3a
R6404 T21578 T21576 punct /,E2f3a
R6405 T21579 T21576 punct −,E2f3a
R6406 T21580 T21581 punct (,7B
R6407 T21581 T21545 parataxis 7B,confirmed
R6408 T21582 T21581 compound Figure,7B
R6409 T21583 T21581 punct ),7B
R6410 T21584 T21545 punct .,confirmed
R6411 T21586 T21587 compound E2f3a,protein
R6412 T21587 T21588 nsubj protein,was
R6413 T21589 T21588 acomp absent,was
R6414 T21590 T21588 prep in,was
R6415 T21591 T21592 nmod E2f3a,lysate
R6416 T21592 T21590 pobj lysate,in
R6417 T21593 T21591 punct −,E2f3a
R6418 T21594 T21591 punct /,E2f3a
R6419 T21595 T21591 punct −,E2f3a
R6420 T21596 T21592 amod retinal,lysate
R6421 T21597 T21598 punct (,S8
R6422 T21598 T21588 parataxis S8,was
R6423 T21599 T21598 nmod Figures,S8
R6424 T21600 T21598 nummod 6,S8
R6425 T21601 T21598 cc and,S8
R6426 T21602 T21598 punct ),S8
R6427 T21603 T21588 punct .,was
R6428 T21605 T21606 advmod Importantly,were
R6429 T21607 T21606 punct ", ",were
R6430 T21608 T21609 det the,levels
R6431 T21609 T21606 nsubj levels,were
R6432 T21610 T21609 prep of,levels
R6433 T21611 T21612 compound E2f3b,message
R6434 T21612 T21610 pobj message,of
R6435 T21613 T21606 acomp similar,were
R6436 T21614 T21606 prep in,were
R6437 T21615 T21616 det the,retina
R6438 T21616 T21614 pobj retina,in
R6439 T21617 T21618 nmod Rb,KO
R6440 T21618 T21616 nmod KO,retina
R6441 T21619 T21618 cc and,KO
R6442 T21620 T21621 compound Rb,E2f3a
R6443 T21621 T21623 compound E2f3a,DKO
R6444 T21622 T21621 punct /,E2f3a
R6445 T21623 T21618 conj DKO,KO
R6446 T21624 T21606 punct ", ",were
R6447 T21625 T21606 advcl ruling,were
R6448 T21626 T21625 prt out,ruling
R6449 T21627 T21628 det the,possibility
R6450 T21628 T21625 dobj possibility,ruling
R6451 T21629 T21630 mark that,were
R6452 T21630 T21628 acl were,possibility
R6453 T21631 T21632 det any,effects
R6454 T21632 T21630 nsubj effects,were
R6455 T21633 T21632 prep of,effects
R6456 T21634 T21635 compound E2f3a,deletion
R6457 T21635 T21633 pobj deletion,of
R6458 T21636 T21637 nsubj we,observe
R6459 T21637 T21632 advcl observe,effects
R6460 T21638 T21637 aux might,observe
R6461 T21639 T21630 prep due,were
R6462 T21640 T21639 pcomp to,due
R6463 T21641 T21642 amod down,regulation
R6464 T21642 T21639 pobj regulation,due
R6465 T21643 T21642 punct -,regulation
R6466 T21644 T21642 prep of,regulation
R6467 T21645 T21644 pobj E2f3b,of
R6468 T21646 T21647 punct (,7C
R6469 T21647 T21630 parataxis 7C,were
R6470 T21648 T21647 compound Figure,7C
R6471 T21649 T21647 punct ),7C
R6472 T21650 T21606 punct .,were
R6473 T21652 T21653 advmod Also,were
R6474 T21654 T21653 punct ", ",were
R6475 T21655 T21656 det the,levels
R6476 T21656 T21653 nsubj levels,were
R6477 T21657 T21656 prep of,levels
R6478 T21658 T21659 amod other,E2fs
R6479 T21659 T21657 pobj E2fs,of
R6480 T21660 T21661 det the,same
R6481 T21661 T21653 attr same,were
R6482 T21662 T21661 prep in,same
R6483 T21663 T21664 det the,retina
R6484 T21664 T21662 pobj retina,in
R6485 T21665 T21666 nmod Rb,KO
R6486 T21666 T21664 nmod KO,retina
R6487 T21667 T21666 punct ", ",KO
R6488 T21668 T21669 compound Rb,E2f3
R6489 T21669 T21671 compound E2f3,DKO
R6490 T21670 T21669 punct /,E2f3
R6491 T21671 T21666 conj DKO,KO
R6492 T21672 T21671 punct ", ",DKO
R6493 T21673 T21671 cc and,DKO
R6494 T21674 T21675 compound Rb,E2f3a
R6495 T21675 T21677 compound E2f3a,DKO
R6496 T21676 T21675 punct /,E2f3a
R6497 T21677 T21671 conj DKO,DKO
R6498 T21678 T21653 punct ", ",were
R6499 T21679 T21653 advcl ruling,were
R6500 T21680 T21679 prt out,ruling
R6501 T21681 T21682 det any,effects
R6502 T21682 T21679 dobj effects,ruling
R6503 T21683 T21684 advmod cross,regulatory
R6504 T21684 T21682 amod regulatory,effects
R6505 T21685 T21684 punct -,regulatory
R6506 T21686 T21687 punct (,7C
R6507 T21687 T21653 parataxis 7C,were
R6508 T21688 T21687 compound Figure,7C
R6509 T21689 T21687 punct ),7C
R6510 T21690 T21691 punct [,55
R6511 T21691 T21653 parataxis 55,were
R6512 T21692 T21691 punct ],55
R6513 T21693 T21653 punct .,were
R6514 T21695 T21696 nsubj E2f3a,trigger
R6515 T21697 T21696 aux can,trigger
R6516 T21698 T21699 compound cell,cycle
R6517 T21699 T21700 compound cycle,induction
R6518 T21700 T21696 dobj induction,trigger
R6519 T21701 T21696 punct ", ",trigger
R6520 T21702 T21696 cc but,trigger
R6521 T21703 T21704 mark because,linked
R6522 T21704 T21709 advcl linked,suspected
R6523 T21705 T21706 compound SAC,defects
R6524 T21706 T21704 nsubjpass defects,linked
R6525 T21707 T21704 auxpass are,linked
R6526 T21708 T21704 neg not,linked
R6527 T21709 T21696 conj suspected,trigger
R6528 T21710 T21704 prep to,linked
R6529 T21711 T21712 compound cell,cycle
R6530 T21712 T21713 compound cycle,perturbation
R6531 T21713 T21710 pobj perturbation,to
R6532 T21714 T21715 punct (,3A
R6533 T21715 T21704 parataxis 3A,linked
R6534 T21716 T21715 compound Figures,3A
R6535 T21717 T21715 cc and,3A
R6536 T21718 T21715 conj 4,3A
R6537 T21719 T21715 punct ),3A
R6538 T21720 T21704 punct ", ",linked
R6539 T21721 T21704 cc and,linked
R6540 T21722 T21704 conj in,linked
R6541 T21723 T21722 pobj view,in
R6542 T21724 T21723 prep of,view
R6543 T21725 T21726 det the,association
R6544 T21726 T21724 pobj association,of
R6545 T21727 T21726 amod predominant,association
R6546 T21728 T21726 prep between,association
R6547 T21729 T21728 pobj E2f3b,between
R6548 T21730 T21729 cc and,E2f3b
R6549 T21731 T21729 conj Rb,E2f3b
R6550 T21732 T21726 prep in,association
R6551 T21733 T21734 amod quiescent,cells
R6552 T21734 T21732 pobj cells,in
R6553 T21735 T21736 punct [,19
R6554 T21736 T21726 parataxis 19,association
R6555 T21737 T21736 nummod 16,19
R6556 T21738 T21736 punct ",",19
R6557 T21739 T21736 punct ],19
R6558 T21740 T21709 punct ", ",suspected
R6559 T21741 T21709 nsubj we,suspected
R6560 T21742 T21743 mark that,perturb
R6561 T21743 T21709 ccomp perturb,suspected
R6562 T21744 T21743 nsubj E2f3b,perturb
R6563 T21745 T21743 aux may,perturb
R6564 T21746 T21743 dobj differentiation,perturb
R6565 T21747 T21743 prep in,perturb
R6566 T21748 T21749 compound Rb,KO
R6567 T21749 T21750 compound KO,SACs
R6568 T21750 T21747 pobj SACs,in
R6569 T21751 T21709 punct .,suspected
R6570 T21753 T21754 advmod Unexpectedly,suppressed
R6571 T21755 T21754 punct ", ",suppressed
R6572 T21756 T21754 advmod however,suppressed
R6573 T21757 T21754 punct ", ",suppressed
R6574 T21758 T21759 compound E2f3a,deletion
R6575 T21759 T21754 nsubj deletion,suppressed
R6576 T21760 T21761 det the,defect
R6577 T21761 T21754 dobj defect,suppressed
R6578 T21762 T21763 compound Rb,KO
R6579 T21763 T21761 compound KO,defect
R6580 T21764 T21761 compound SAC,defect
R6581 T21765 T21766 punct (,7D
R6582 T21766 T21754 parataxis 7D,suppressed
R6583 T21767 T21766 compound Figure,7D
R6584 T21768 T21766 punct ),7D
R6585 T21769 T21754 punct .,suppressed
R6586 T21771 T21772 advmod Thus,is
R6587 T21773 T21772 punct ", ",is
R6588 T21774 T21772 advcl separate,is
R6589 T21775 T21774 prep from,separate
R6590 T21776 T21777 poss its,role
R6591 T21777 T21775 pobj role,from
R6592 T21778 T21777 prep in,role
R6593 T21779 T21780 compound cell,cycle
R6594 T21780 T21781 compound cycle,control
R6595 T21781 T21778 pobj control,in
R6596 T21782 T21772 punct ", ",is
R6597 T21783 T21784 compound Rb,regulation
R6598 T21784 T21772 nsubj regulation,is
R6599 T21785 T21784 prep of,regulation
R6600 T21786 T21785 pobj E2f3a,of
R6601 T21787 T21772 acomp critical,is
R6602 T21788 T21789 aux to,ensure
R6603 T21789 T21772 advcl ensure,is
R6604 T21790 T21791 amod proper,differentiation
R6605 T21791 T21789 dobj differentiation,ensure
R6606 T21792 T21791 amod neuronal,differentiation
R6607 T21793 T21772 punct .,is

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T21433 271-292 GO_EXT:0003964 denotes Reverse transcriptase
T21417 0-2 PR_EXT:000013773 denotes Rb
T21419 17-32 GO_RO_EXT:developmental_differentiation_process denotes Differentiation
T21420 41-46 PR_EXT:000028775 denotes E2f3a
T21421 61-65 PR_EXT:000006854 denotes E2f3
T21422 66-73 SO_EXT:0001060 denotes isoform
T21423 102-104 PR_EXT:000013773 denotes Rb
T21424 112-127 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T21425 141-146 PR_EXT:000028775 denotes E2f3a
T21426 146-147 SO_EXT:sequence_nullness_or_absence denotes −
T21427 148-149 SO_EXT:sequence_nullness_or_absence denotes −
T21428 150-154 NCBITaxon:10088 denotes mice
T21429 242-247 PR_EXT:000028775 denotes E2f3a
T21430 249-251 SO_EXT:wild_type_entity_or_quality denotes WT
T21431 257-261 SO_EXT:sequence_nullness denotes null
T21432 262-269 SO_EXT:0001023 denotes alleles
T21434 298-300 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T21435 337-342 PR_EXT:000028775 denotes E2f3a
T21436 353-356 CHEBI_SO_EXT:RNA denotes RNA
T21437 383-385 SO_EXT:wild_type_entity_or_quality denotes WT
T21438 386-392 UBERON:0000966 denotes retina
T21439 422-427 PR_EXT:000028775 denotes E2f3a
T21440 428-431 CHEBI_SO_EXT:RNA denotes RNA
T21441 439-444 PR_EXT:000028775 denotes E2f3a
T21442 444-445 SO_EXT:sequence_nullness_or_absence denotes −
T21443 446-447 SO_EXT:sequence_nullness_or_absence denotes −
T21444 448-454 UBERON:0000966 denotes retina
T21445 468-473 PR_EXT:000028775 denotes E2f3a
T21446 474-481 CHEBI_PR_EXT:protein denotes protein
T21447 496-501 PR_EXT:000028775 denotes E2f3a
T21448 501-502 SO_EXT:sequence_nullness_or_absence denotes −
T21449 503-504 SO_EXT:sequence_nullness_or_absence denotes −
T21450 505-512 UBERON:0000966 denotes retinal
T21451 573-580 SO_EXT:0000673 denotes message
T21452 573-580 CHEBI:33695 denotes message
T21453 601-603 PR_EXT:000013773 denotes Rb
T21454 611-613 PR_EXT:000013773 denotes Rb
T21455 614-619 PR_EXT:000028775 denotes E2f3a
T21456 624-630 UBERON:0000966 denotes retina
T21457 679-684 PR_EXT:000028775 denotes E2f3a
T21458 685-693 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T21459 723-738 GO_EXT:negative_regulation denotes down-regulation
T21460 787-791 PR_EXT:E2F denotes E2fs
T21461 813-815 PR_EXT:000013773 denotes Rb
T21462 820-822 PR_EXT:000013773 denotes Rb
T21463 823-827 PR_EXT:000006854 denotes E2f3
T21464 837-839 PR_EXT:000013773 denotes Rb
T21465 840-845 PR_EXT:000028775 denotes E2f3a
T21466 850-856 UBERON:0000966 denotes retina
T21467 879-889 GO:0065007 denotes regulatory
T21468 916-921 PR_EXT:000028775 denotes E2f3a
T21469 934-938 CL_GO_EXT:cell denotes cell
T21470 934-944 GO:0007049 denotes cell cycle
T21471 998-1002 CL_GO_EXT:cell denotes cell
T21472 998-1008 GO:0007049 denotes cell cycle
T21473 1103-1105 PR_EXT:000013773 denotes Rb
T21474 1109-1118 GO:0044838 denotes quiescent
T21475 1119-1124 CL_GO_EXT:cell denotes cells
T21476 1170-1185 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T21477 1189-1191 PR_EXT:000013773 denotes Rb
T21478 1224-1229 PR_EXT:000028775 denotes E2f3a
T21479 1230-1238 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T21480 1254-1256 PR_EXT:000013773 denotes Rb
T21481 1316-1320 CL_GO_EXT:cell denotes cell
T21482 1316-1334 GO:0051726 denotes cell cycle control
T21483 1336-1338 PR_EXT:000013773 denotes Rb
T21484 1339-1349 GO:0065007 denotes regulation
T21485 1353-1358 PR_EXT:000028775 denotes E2f3a
T21486 1388-1396 CL:0000540 denotes neuronal
T21487 1397-1412 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T21418 3-12 GO:0065007 denotes Regulates

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T21372 0-2 PR:000013773 denotes Rb
T21373 3-12 GO:0065007 denotes Regulates
T21374 41-46 PR:000028775 denotes E2f3a
T21375 61-65 PR:000006854 denotes E2f3
T21376 66-73 SO:0001060 denotes isoform
T21377 102-104 PR:000013773 denotes Rb
T21378 141-146 PR:000028775 denotes E2f3a
T21379 150-154 NCBITaxon:10088 denotes mice
T21380 242-247 PR:000028775 denotes E2f3a
T21381 262-269 SO:0001023 denotes alleles
T21382 337-342 PR:000028775 denotes E2f3a
T21383 386-392 UBERON:0000966 denotes retina
T21384 422-427 PR:000028775 denotes E2f3a
T21385 439-444 PR:000028775 denotes E2f3a
T21386 448-454 UBERON:0000966 denotes retina
T21387 468-473 PR:000028775 denotes E2f3a
T21388 496-501 PR:000028775 denotes E2f3a
T21389 505-512 UBERON:0000966 denotes retinal
T21390 573-580 SO:0000673 denotes message
T21391 573-580 CHEBI:33695 denotes message
T21392 601-603 PR:000013773 denotes Rb
T21393 611-613 PR:000013773 denotes Rb
T21394 614-619 PR:000028775 denotes E2f3a
T21395 624-630 UBERON:0000966 denotes retina
T21396 679-684 PR:000028775 denotes E2f3a
T21397 813-815 PR:000013773 denotes Rb
T21398 820-822 PR:000013773 denotes Rb
T21399 823-827 PR:000006854 denotes E2f3
T21400 837-839 PR:000013773 denotes Rb
T21401 840-845 PR:000028775 denotes E2f3a
T21402 850-856 UBERON:0000966 denotes retina
T21403 879-889 GO:0065007 denotes regulatory
T21404 916-921 PR:000028775 denotes E2f3a
T21405 934-944 GO:0007049 denotes cell cycle
T21406 998-1008 GO:0007049 denotes cell cycle
T21407 1103-1105 PR:000013773 denotes Rb
T21408 1109-1118 GO:0044838 denotes quiescent
T21409 1189-1191 PR:000013773 denotes Rb
T21410 1224-1229 PR:000028775 denotes E2f3a
T21411 1254-1256 PR:000013773 denotes Rb
T21412 1316-1334 GO:0051726 denotes cell cycle control
T21413 1336-1338 PR:000013773 denotes Rb
T21414 1339-1349 GO:0065007 denotes regulation
T21415 1353-1358 PR:000028775 denotes E2f3a
T21416 1388-1396 CL:0000540 denotes neuronal

2_test

Id Subject Object Predicate Lexical cue
17608565-16909124-84869005 911-913 16909124 denotes 55
17608565-10779352-84869006 1126-1128 10779352 denotes 16
17608565-15175242-84869007 1129-1131 15175242 denotes 19
T75502 911-913 16909124 denotes 55
T75730 1126-1128 10779352 denotes 16
T58568 1129-1131 15175242 denotes 19