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PMC:1914394 / 39311-40718 JSONTXT

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Id Subject Object Predicate Lexical cue
T37919 25-28 DT denotes the
T37920 45-51 NN denotes Defect
T37921 29-44 NN denotes Differentiation
T37922 52-54 IN denotes in
T37923 55-57 NN denotes Rb
T37915 0-3 DT denotes The
T37916 10-17 NN denotes Isoform
T37917 4-9 NN denotes E2f3a
T37918 18-24 VBZ denotes Drives
T37924 58-60 NN denotes KO
T37925 61-65 NNS denotes SACs
T37926 65-199 sentence denotes (A) Schematic diagrams of the mouse WT, E2f3a−/−, and the Cre-recombined floxed E2f3 loci (indicated here as E2f3−/− for simplicity).
T37927 66-67 -LRB- denotes (
T37928 67-68 LS denotes A
T37929 80-88 NNS denotes diagrams
T37930 68-69 -RRB- denotes )
T37931 70-79 JJ denotes Schematic
T37932 89-91 IN denotes of
T37933 92-95 DT denotes the
T37934 102-104 NN denotes WT
T37935 96-101 NN denotes mouse
T37936 104-106 , denotes ,
T37937 106-111 NN denotes E2f3a
T37938 111-112 SYM denotes −
T37939 112-113 HYPH denotes /
T37940 113-114 SYM denotes −
T37941 114-116 , denotes ,
T37942 116-119 CC denotes and
T37943 120-123 DT denotes the
T37944 151-155 NNS denotes loci
T37945 124-127 NN denotes Cre
T37946 127-128 HYPH denotes -
T37947 128-138 VBN denotes recombined
T37948 139-145 VBN denotes floxed
T37949 146-150 NN denotes E2f3
T37950 156-157 -LRB- denotes (
T37951 157-166 VBN denotes indicated
T37952 167-171 RB denotes here
T37953 172-174 IN denotes as
T37954 175-179 NN denotes E2f3
T37955 179-180 SYM denotes −
T37956 180-181 HYPH denotes /
T37957 181-182 SYM denotes −
T37958 183-186 IN denotes for
T37959 187-197 NN denotes simplicity
T37960 197-198 -RRB- denotes )
T37961 198-199 . denotes .
T37962 199-279 sentence denotes E2f3a−/− mice lack most of E2f3 exon 1a and part of intron 1a (red dotted box).
T37963 200-205 NN denotes E2f3a
T37964 209-213 NNS denotes mice
T37965 205-206 SYM denotes −
T37966 206-207 HYPH denotes /
T37967 207-208 SYM denotes −
T37968 214-218 VBP denotes lack
T37969 219-223 JJS denotes most
T37970 224-226 IN denotes of
T37971 227-231 NN denotes E2f3
T37972 237-239 NN denotes 1a
T37973 232-236 NN denotes exon
T37974 240-243 CC denotes and
T37975 244-248 NN denotes part
T37976 249-251 IN denotes of
T37977 252-258 NN denotes intron
T37978 259-261 NN denotes 1a
T37979 262-263 -LRB- denotes (
T37980 274-277 NN denotes box
T37981 263-266 JJ denotes red
T37982 267-273 VBN denotes dotted
T37983 277-278 -RRB- denotes )
T37984 278-279 . denotes .
T37985 279-308 sentence denotes Arrows indicate PCR primers.
T37986 280-286 NNS denotes Arrows
T37987 287-295 VBP denotes indicate
T37988 296-299 NN denotes PCR
T37989 300-307 NNS denotes primers
T37990 307-308 . denotes .
T37991 308-363 sentence denotes Genotyping of an E2f3a+/− mouse is shown on the right.
T37992 309-319 NN denotes Genotyping
T37993 344-349 VBN denotes shown
T37994 320-322 IN denotes of
T37995 323-325 DT denotes an
T37996 335-340 NN denotes mouse
T37997 326-331 NN denotes E2f3a
T37998 331-332 SYM denotes +
T37999 332-333 HYPH denotes /
T38000 333-334 SYM denotes −
T38001 341-343 VBZ denotes is
T38002 350-352 IN denotes on
T38003 353-356 DT denotes the
T38004 357-362 NN denotes right
T38005 362-363 . denotes .
T38006 363-423 sentence denotes (B) RT-PCR detection of E2f3a and E2f3b mRNA in the retina.
T38007 364-365 -LRB- denotes (
T38008 365-366 LS denotes B
T38009 375-384 NN denotes detection
T38010 366-367 -RRB- denotes )
T38011 368-370 NN denotes RT
T38012 371-374 NN denotes PCR
T38013 370-371 HYPH denotes -
T38014 385-387 IN denotes of
T38015 388-393 NN denotes E2f3a
T38016 404-408 NN denotes mRNA
T38017 394-397 CC denotes and
T38018 398-403 NN denotes E2f3b
T38019 409-411 IN denotes in
T38020 412-415 DT denotes the
T38021 416-422 NN denotes retina
T38022 422-423 . denotes .
T38023 423-557 sentence denotes The sequences of primers are 1aF (5′-GCCTCTACACCACGCCACAAG-3′), 1bF (5′-CGGAAATGCCCTTACAGC-3′), and 4R (5′-CTCAGTCACTTCTTTGGACAG-3′).
T38024 424-427 DT denotes The
T38025 428-437 NNS denotes sequences
T38026 449-452 VBP denotes are
T38027 438-440 IN denotes of
T38028 441-448 NNS denotes primers
T38029 453-456 NN denotes 1aF
T38030 457-458 -LRB- denotes (
T38031 458-459 CD denotes 5
T38032 461-482 NN denotes GCCTCTACACCACGCCACAAG
T38033 459-460 SYM denotes ′
T38034 460-461 HYPH denotes -
T38035 482-483 HYPH denotes -
T38036 483-484 CD denotes 3
T38037 484-485 SYM denotes ′
T38038 485-486 -RRB- denotes )
T38039 486-488 , denotes ,
T38040 488-491 NN denotes 1bF
T38041 492-493 -LRB- denotes (
T38042 493-494 CD denotes 5
T38043 496-514 NN denotes CGGAAATGCCCTTACAGC
T38044 494-495 SYM denotes ′
T38045 495-496 HYPH denotes -
T38046 514-515 HYPH denotes -
T38047 515-516 CD denotes 3
T38048 516-517 SYM denotes ′
T38049 517-518 -RRB- denotes )
T38050 518-520 , denotes ,
T38051 520-523 CC denotes and
T38052 524-526 NN denotes 4R
T38053 527-528 -LRB- denotes (
T38054 528-529 CD denotes 5
T38055 531-552 NN denotes CTCAGTCACTTCTTTGGACAG
T38056 529-530 SYM denotes ′
T38057 530-531 HYPH denotes -
T38058 552-553 HYPH denotes -
T38059 553-554 CD denotes 3
T38060 554-555 SYM denotes ′
T38061 555-556 -RRB- denotes )
T38062 556-557 . denotes .
T38063 557-604 sentence denotes WT retina expresses both E2f3a and E2f3b mRNA.
T38064 558-560 NN denotes WT
T38065 561-567 NN denotes retina
T38066 568-577 VBZ denotes expresses
T38067 578-582 CC denotes both
T38068 583-588 NN denotes E2f3a
T38069 599-603 NN denotes mRNA
T38070 589-592 CC denotes and
T38071 593-598 NN denotes E2f3b
T38072 603-604 . denotes .
T38073 604-682 sentence denotes As expected, E2f3a−/− retina lacks E2f3a mRNA and still expresses E2f3b mRNA.
T38074 605-607 IN denotes As
T38075 608-616 VBN denotes expected
T38076 634-639 VBZ denotes lacks
T38077 616-618 , denotes ,
T38078 618-623 NN denotes E2f3a
T38079 627-633 NN denotes retina
T38080 623-624 SYM denotes −
T38081 624-625 HYPH denotes /
T38082 625-626 SYM denotes −
T38083 640-645 NN denotes E2f3a
T38084 646-650 NN denotes mRNA
T38085 651-654 CC denotes and
T38086 655-660 RB denotes still
T38087 661-670 VBZ denotes expresses
T38088 671-676 NN denotes E2f3b
T38089 677-681 NN denotes mRNA
T38090 681-682 . denotes .
T38091 682-793 sentence denotes E2f3−/− retina lacks full-length E2f3a and E2f3b mRNAs, and instead expresses a truncated mRNA lacking exon 3.
T38092 683-687 NN denotes E2f3
T38093 691-697 NN denotes retina
T38094 687-688 SYM denotes −
T38095 688-689 HYPH denotes /
T38096 689-690 SYM denotes −
T38097 698-703 VBZ denotes lacks
T38098 704-708 JJ denotes full
T38099 709-715 NN denotes length
T38100 708-709 HYPH denotes -
T38101 732-737 NNS denotes mRNAs
T38102 716-721 NN denotes E2f3a
T38103 722-725 CC denotes and
T38104 726-731 NN denotes E2f3b
T38105 737-739 , denotes ,
T38106 739-742 CC denotes and
T38107 743-750 RB denotes instead
T38108 751-760 VBZ denotes expresses
T38109 761-762 DT denotes a
T38110 773-777 NN denotes mRNA
T38111 763-772 VBN denotes truncated
T38112 778-785 VBG denotes lacking
T38113 786-790 NN denotes exon
T38114 791-792 CD denotes 3
T38115 792-793 . denotes .
T38116 793-878 sentence denotes (C) Real-time RT-PCR analysis of E2f genes in P8 retinas of the indicated genotypes.
T38117 794-795 -LRB- denotes (
T38118 795-796 LS denotes C
T38119 815-823 NN denotes analysis
T38120 796-797 -RRB- denotes )
T38121 798-802 JJ denotes Real
T38122 803-807 NN denotes time
T38123 802-803 HYPH denotes -
T38124 808-810 NN denotes RT
T38125 811-814 NN denotes PCR
T38126 810-811 HYPH denotes -
T38127 824-826 IN denotes of
T38128 827-830 NN denotes E2f
T38129 831-836 NNS denotes genes
T38130 837-839 IN denotes in
T38131 840-842 NN denotes P8
T38132 843-850 NNS denotes retinas
T38133 851-853 IN denotes of
T38134 854-857 DT denotes the
T38135 868-877 NNS denotes genotypes
T38136 858-867 VBN denotes indicated
T38137 877-878 . denotes .
T38138 878-1078 sentence denotes Error bars represent SD of measurements from three animals, and asterisks indicate a significant difference between WT and the indicated genotypes (*, p <0.05; **; p <0.01; ANOVA and Tukey HSD test).
T38139 879-884 NN denotes Error
T38140 885-889 NNS denotes bars
T38141 890-899 VBP denotes represent
T38142 900-902 NN denotes SD
T38143 903-905 IN denotes of
T38144 906-918 NNS denotes measurements
T38145 919-923 IN denotes from
T38146 924-929 CD denotes three
T38147 930-937 NNS denotes animals
T38148 937-939 , denotes ,
T38149 939-942 CC denotes and
T38150 943-952 NNS denotes asterisks
T38151 953-961 VBP denotes indicate
T38152 962-963 DT denotes a
T38153 976-986 NN denotes difference
T38154 964-975 JJ denotes significant
T38155 987-994 IN denotes between
T38156 995-997 NN denotes WT
T38157 998-1001 CC denotes and
T38158 1002-1005 DT denotes the
T38159 1006-1015 VBN denotes indicated
T38160 1016-1025 NNS denotes genotypes
T38161 1026-1027 -LRB- denotes (
T38162 1072-1076 NN denotes test
T38163 1027-1028 SYM denotes *
T38164 1033-1037 CD denotes 0.05
T38165 1028-1030 , denotes ,
T38166 1030-1031 NN denotes p
T38167 1032-1033 SYM denotes <
T38168 1037-1038 : denotes ;
T38169 1039-1041 SYM denotes **
T38170 1046-1050 CD denotes 0.01
T38171 1041-1042 : denotes ;
T38172 1043-1044 NN denotes p
T38173 1045-1046 SYM denotes <
T38174 1050-1051 : denotes ;
T38175 1052-1057 NN denotes ANOVA
T38176 1058-1061 CC denotes and
T38177 1062-1067 NNP denotes Tukey
T38178 1068-1071 NN denotes HSD
T38179 1076-1077 -RRB- denotes )
T38180 1077-1078 . denotes .
T38181 1078-1122 sentence denotes (D) Rescue of Rb KO SACs by E2f3a deletion.
T38182 1079-1080 -LRB- denotes (
T38183 1080-1081 LS denotes D
T38184 1083-1089 NN denotes Rescue
T38185 1081-1082 -RRB- denotes )
T38186 1090-1092 IN denotes of
T38187 1093-1095 NN denotes Rb
T38188 1096-1098 NN denotes KO
T38189 1099-1103 NNS denotes SACs
T38190 1104-1106 IN denotes by
T38191 1107-1112 NN denotes E2f3a
T38192 1113-1121 NN denotes deletion
T38193 1121-1122 . denotes .
T38194 1122-1280 sentence denotes Horizontal retinal sections of the indicated genotypes and ages were stained for nuclei (DAPI, blue), M-phase (PH3, green), and the SAC marker Slc18a3 (red).
T38195 1123-1133 JJ denotes Horizontal
T38196 1142-1150 NNS denotes sections
T38197 1134-1141 JJ denotes retinal
T38198 1192-1199 VBN denotes stained
T38199 1151-1153 IN denotes of
T38200 1154-1157 DT denotes the
T38201 1168-1177 NNS denotes genotypes
T38202 1158-1167 VBN denotes indicated
T38203 1178-1181 CC denotes and
T38204 1182-1186 NNS denotes ages
T38205 1187-1191 VBD denotes were
T38206 1200-1203 IN denotes for
T38207 1204-1210 NNS denotes nuclei
T38208 1211-1212 -LRB- denotes (
T38209 1218-1222 JJ denotes blue
T38210 1212-1216 NN denotes DAPI
T38211 1216-1218 , denotes ,
T38212 1222-1223 -RRB- denotes )
T38213 1223-1225 , denotes ,
T38214 1225-1226 NN denotes M
T38215 1227-1232 NN denotes phase
T38216 1226-1227 HYPH denotes -
T38217 1233-1234 -LRB- denotes (
T38218 1239-1244 JJ denotes green
T38219 1234-1237 NN denotes PH3
T38220 1237-1239 , denotes ,
T38221 1244-1245 -RRB- denotes )
T38222 1245-1247 , denotes ,
T38223 1247-1250 CC denotes and
T38224 1251-1254 DT denotes the
T38225 1259-1265 NN denotes marker
T38226 1255-1258 NN denotes SAC
T38227 1266-1273 NN denotes Slc18a3
T38228 1274-1275 -LRB- denotes (
T38229 1275-1278 JJ denotes red
T38230 1278-1279 -RRB- denotes )
T38231 1279-1280 . denotes .
T38232 1280-1359 sentence denotes E2f3a deletion does not suppress ectopic division, but rescues the SAC defect.
T38233 1281-1286 NN denotes E2f3a
T38234 1287-1295 NN denotes deletion
T38235 1305-1313 VB denotes suppress
T38236 1296-1300 VBZ denotes does
T38237 1301-1304 RB denotes not
T38238 1314-1321 JJ denotes ectopic
T38239 1322-1330 NN denotes division
T38240 1330-1332 , denotes ,
T38241 1332-1335 CC denotes but
T38242 1336-1343 VBZ denotes rescues
T38243 1344-1347 DT denotes the
T38244 1352-1358 NN denotes defect
T38245 1348-1351 NN denotes SAC
T38246 1358-1359 . denotes .
T38247 1359-1381 sentence denotes Scale bars are 50 μm.
T38248 1360-1365 NN denotes Scale
T38249 1366-1370 NNS denotes bars
T38250 1371-1374 VBP denotes are
T38251 1375-1377 CD denotes 50
T38252 1378-1380 NN denotes μm
T38253 1380-1381 . denotes .
T38254 1381-1407 sentence denotes M, molecular size marker.
T38255 1382-1383 NN denotes M
T38256 1383-1385 , denotes ,
T38257 1385-1394 JJ denotes molecular
T38258 1395-1399 NN denotes size
T38259 1400-1406 NN denotes marker
T38260 1406-1407 . denotes .
R11341 T37915 T37916 det The,Isoform
R11342 T37916 T37918 nsubj Isoform,Drives
R11343 T37917 T37916 compound E2f3a,Isoform
R11344 T37919 T37920 det the,Defect
R11345 T37920 T37918 dobj Defect,Drives
R11346 T37921 T37920 compound Differentiation,Defect
R11347 T37922 T37918 prep in,Drives
R11348 T37923 T37924 compound Rb,KO
R11349 T37924 T37925 compound KO,SACs
R11350 T37925 T37922 pobj SACs,in
R11351 T37927 T37928 punct (,A
R11352 T37928 T37929 meta A,diagrams
R11353 T37930 T37928 punct ),A
R11354 T37931 T37929 amod Schematic,diagrams
R11355 T37932 T37929 prep of,diagrams
R11356 T37933 T37934 det the,WT
R11357 T37934 T37932 pobj WT,of
R11358 T37935 T37934 compound mouse,WT
R11359 T37936 T37934 punct ", ",WT
R11360 T37937 T37934 conj E2f3a,WT
R11361 T37938 T37937 punct −,E2f3a
R11362 T37939 T37937 punct /,E2f3a
R11363 T37940 T37937 punct −,E2f3a
R11364 T37941 T37937 punct ", ",E2f3a
R11365 T37942 T37937 cc and,E2f3a
R11366 T37943 T37944 det the,loci
R11367 T37944 T37937 conj loci,E2f3a
R11368 T37945 T37944 nmod Cre,loci
R11369 T37946 T37945 punct -,Cre
R11370 T37947 T37945 amod recombined,Cre
R11371 T37948 T37944 amod floxed,loci
R11372 T37949 T37944 compound E2f3,loci
R11373 T37950 T37944 punct (,loci
R11374 T37951 T37944 acl indicated,loci
R11375 T37952 T37951 advmod here,indicated
R11376 T37953 T37951 prep as,indicated
R11377 T37954 T37953 pobj E2f3,as
R11378 T37955 T37954 punct −,E2f3
R11379 T37956 T37954 punct /,E2f3
R11380 T37957 T37954 punct −,E2f3
R11381 T37958 T37951 prep for,indicated
R11382 T37959 T37958 pobj simplicity,for
R11383 T37960 T37929 punct ),diagrams
R11384 T37961 T37929 punct .,diagrams
R11385 T37963 T37964 nmod E2f3a,mice
R11386 T37964 T37968 nsubj mice,lack
R11387 T37965 T37963 punct −,E2f3a
R11388 T37966 T37963 punct /,E2f3a
R11389 T37967 T37963 punct −,E2f3a
R11390 T37969 T37968 dobj most,lack
R11391 T37970 T37969 prep of,most
R11392 T37971 T37972 compound E2f3,1a
R11393 T37972 T37970 pobj 1a,of
R11394 T37973 T37972 compound exon,1a
R11395 T37974 T37969 cc and,most
R11396 T37975 T37969 conj part,most
R11397 T37976 T37975 prep of,part
R11398 T37977 T37978 compound intron,1a
R11399 T37978 T37976 pobj 1a,of
R11400 T37979 T37980 punct (,box
R11401 T37980 T37968 parataxis box,lack
R11402 T37981 T37980 amod red,box
R11403 T37982 T37980 amod dotted,box
R11404 T37983 T37980 punct ),box
R11405 T37984 T37968 punct .,lack
R11406 T37986 T37987 nsubj Arrows,indicate
R11407 T37988 T37989 compound PCR,primers
R11408 T37989 T37987 dobj primers,indicate
R11409 T37990 T37987 punct .,indicate
R11410 T37992 T37993 nsubjpass Genotyping,shown
R11411 T37994 T37992 prep of,Genotyping
R11412 T37995 T37996 det an,mouse
R11413 T37996 T37994 pobj mouse,of
R11414 T37997 T37996 nmod E2f3a,mouse
R11415 T37998 T37997 punct +,E2f3a
R11416 T37999 T37997 punct /,E2f3a
R11417 T38000 T37997 punct −,E2f3a
R11418 T38001 T37993 auxpass is,shown
R11419 T38002 T37993 prep on,shown
R11420 T38003 T38004 det the,right
R11421 T38004 T38002 pobj right,on
R11422 T38005 T37993 punct .,shown
R11423 T38007 T38008 punct (,B
R11424 T38008 T38009 meta B,detection
R11425 T38010 T38008 punct ),B
R11426 T38011 T38012 compound RT,PCR
R11427 T38012 T38009 compound PCR,detection
R11428 T38013 T38012 punct -,PCR
R11429 T38014 T38009 prep of,detection
R11430 T38015 T38016 nmod E2f3a,mRNA
R11431 T38016 T38014 pobj mRNA,of
R11432 T38017 T38015 cc and,E2f3a
R11433 T38018 T38015 conj E2f3b,E2f3a
R11434 T38019 T38009 prep in,detection
R11435 T38020 T38021 det the,retina
R11436 T38021 T38019 pobj retina,in
R11437 T38022 T38009 punct .,detection
R11438 T38024 T38025 det The,sequences
R11439 T38025 T38026 nsubj sequences,are
R11440 T38027 T38025 prep of,sequences
R11441 T38028 T38027 pobj primers,of
R11442 T38029 T38026 attr 1aF,are
R11443 T38030 T38029 punct (,1aF
R11444 T38031 T38032 nummod 5,GCCTCTACACCACGCCACAAG
R11445 T38032 T38029 appos GCCTCTACACCACGCCACAAG,1aF
R11446 T38033 T38031 punct ′,5
R11447 T38034 T38032 punct -,GCCTCTACACCACGCCACAAG
R11448 T38035 T38032 punct -,GCCTCTACACCACGCCACAAG
R11449 T38036 T38032 nummod 3,GCCTCTACACCACGCCACAAG
R11450 T38037 T38032 punct ′,GCCTCTACACCACGCCACAAG
R11451 T38038 T38029 punct ),1aF
R11452 T38039 T38029 punct ", ",1aF
R11453 T38040 T38029 conj 1bF,1aF
R11454 T38041 T38040 punct (,1bF
R11455 T38042 T38043 nummod 5,CGGAAATGCCCTTACAGC
R11456 T38043 T38040 appos CGGAAATGCCCTTACAGC,1bF
R11457 T38044 T38042 punct ′,5
R11458 T38045 T38043 punct -,CGGAAATGCCCTTACAGC
R11459 T38046 T38043 punct -,CGGAAATGCCCTTACAGC
R11460 T38047 T38043 nummod 3,CGGAAATGCCCTTACAGC
R11461 T38048 T38043 punct ′,CGGAAATGCCCTTACAGC
R11462 T38049 T38040 punct ),1bF
R11463 T38050 T38040 punct ", ",1bF
R11464 T38051 T38040 cc and,1bF
R11465 T38052 T38040 conj 4R,1bF
R11466 T38053 T38052 punct (,4R
R11467 T38054 T38055 nummod 5,CTCAGTCACTTCTTTGGACAG
R11468 T38055 T38052 appos CTCAGTCACTTCTTTGGACAG,4R
R11469 T38056 T38054 punct ′,5
R11470 T38057 T38055 punct -,CTCAGTCACTTCTTTGGACAG
R11471 T38058 T38055 punct -,CTCAGTCACTTCTTTGGACAG
R11472 T38059 T38055 nummod 3,CTCAGTCACTTCTTTGGACAG
R11473 T38060 T38055 punct ′,CTCAGTCACTTCTTTGGACAG
R11474 T38061 T38026 punct ),are
R11475 T38062 T38026 punct .,are
R11476 T38064 T38065 compound WT,retina
R11477 T38065 T38066 nsubj retina,expresses
R11478 T38067 T38068 preconj both,E2f3a
R11479 T38068 T38069 nmod E2f3a,mRNA
R11480 T38069 T38066 dobj mRNA,expresses
R11481 T38070 T38068 cc and,E2f3a
R11482 T38071 T38068 conj E2f3b,E2f3a
R11483 T38072 T38066 punct .,expresses
R11484 T38074 T38075 mark As,expected
R11485 T38075 T38076 advcl expected,lacks
R11486 T38077 T38076 punct ", ",lacks
R11487 T38078 T38079 nmod E2f3a,retina
R11488 T38079 T38076 nsubj retina,lacks
R11489 T38080 T38078 punct −,E2f3a
R11490 T38081 T38078 punct /,E2f3a
R11491 T38082 T38078 punct −,E2f3a
R11492 T38083 T38084 compound E2f3a,mRNA
R11493 T38084 T38076 dobj mRNA,lacks
R11494 T38085 T38076 cc and,lacks
R11495 T38086 T38087 advmod still,expresses
R11496 T38087 T38076 conj expresses,lacks
R11497 T38088 T38089 compound E2f3b,mRNA
R11498 T38089 T38087 dobj mRNA,expresses
R11499 T38090 T38076 punct .,lacks
R11500 T38092 T38093 nmod E2f3,retina
R11501 T38093 T38097 nsubj retina,lacks
R11502 T38094 T38092 punct −,E2f3
R11503 T38095 T38092 punct /,E2f3
R11504 T38096 T38092 punct −,E2f3
R11505 T38098 T38099 amod full,length
R11506 T38099 T38101 nmod length,mRNAs
R11507 T38100 T38099 punct -,length
R11508 T38101 T38097 dobj mRNAs,lacks
R11509 T38102 T38101 nmod E2f3a,mRNAs
R11510 T38103 T38102 cc and,E2f3a
R11511 T38104 T38102 conj E2f3b,E2f3a
R11512 T38105 T38097 punct ", ",lacks
R11513 T38106 T38097 cc and,lacks
R11514 T38107 T38108 advmod instead,expresses
R11515 T38108 T38097 conj expresses,lacks
R11516 T38109 T38110 det a,mRNA
R11517 T38110 T38108 dobj mRNA,expresses
R11518 T38111 T38110 amod truncated,mRNA
R11519 T38112 T38110 acl lacking,mRNA
R11520 T38113 T38112 dobj exon,lacking
R11521 T38114 T38113 nummod 3,exon
R11522 T38115 T38097 punct .,lacks
R11523 T38117 T38118 punct (,C
R11524 T38118 T38119 meta C,analysis
R11525 T38120 T38118 punct ),C
R11526 T38121 T38122 amod Real,time
R11527 T38122 T38119 compound time,analysis
R11528 T38123 T38122 punct -,time
R11529 T38124 T38125 compound RT,PCR
R11530 T38125 T38119 compound PCR,analysis
R11531 T38126 T38125 punct -,PCR
R11532 T38127 T38119 prep of,analysis
R11533 T38128 T38129 compound E2f,genes
R11534 T38129 T38127 pobj genes,of
R11535 T38130 T38119 prep in,analysis
R11536 T38131 T38132 compound P8,retinas
R11537 T38132 T38130 pobj retinas,in
R11538 T38133 T38132 prep of,retinas
R11539 T38134 T38135 det the,genotypes
R11540 T38135 T38133 pobj genotypes,of
R11541 T38136 T38135 amod indicated,genotypes
R11542 T38137 T38119 punct .,analysis
R11543 T38139 T38140 compound Error,bars
R11544 T38140 T38141 nsubj bars,represent
R11545 T38142 T38141 dobj SD,represent
R11546 T38143 T38142 prep of,SD
R11547 T38144 T38143 pobj measurements,of
R11548 T38145 T38144 prep from,measurements
R11549 T38146 T38147 nummod three,animals
R11550 T38147 T38145 pobj animals,from
R11551 T38148 T38141 punct ", ",represent
R11552 T38149 T38141 cc and,represent
R11553 T38150 T38151 nsubj asterisks,indicate
R11554 T38151 T38141 conj indicate,represent
R11555 T38152 T38153 det a,difference
R11556 T38153 T38151 dobj difference,indicate
R11557 T38154 T38153 amod significant,difference
R11558 T38155 T38153 prep between,difference
R11559 T38156 T38155 pobj WT,between
R11560 T38157 T38156 cc and,WT
R11561 T38158 T38159 det the,indicated
R11562 T38159 T38160 nmod indicated,genotypes
R11563 T38160 T38156 conj genotypes,WT
R11564 T38161 T38162 punct (,test
R11565 T38162 T38153 parataxis test,difference
R11566 T38163 T38164 punct *,0.05
R11567 T38164 T38162 ccomp 0.05,test
R11568 T38165 T38164 punct ", ",0.05
R11569 T38166 T38164 nsubj p,0.05
R11570 T38167 T38164 punct <,0.05
R11571 T38168 T38162 punct ;,test
R11572 T38169 T38170 punct **,0.01
R11573 T38170 T38162 ccomp 0.01,test
R11574 T38171 T38170 punct ;,0.01
R11575 T38172 T38170 nsubj p,0.01
R11576 T38173 T38170 punct <,0.01
R11577 T38174 T38162 punct ;,test
R11578 T38175 T38162 nmod ANOVA,test
R11579 T38176 T38175 cc and,ANOVA
R11580 T38177 T38178 compound Tukey,HSD
R11581 T38178 T38175 conj HSD,ANOVA
R11582 T38179 T38162 punct ),test
R11583 T38180 T38151 punct .,indicate
R11584 T38182 T38183 punct (,D
R11585 T38183 T38184 meta D,Rescue
R11586 T38185 T38183 punct ),D
R11587 T38186 T38184 prep of,Rescue
R11588 T38187 T38188 compound Rb,KO
R11589 T38188 T38189 compound KO,SACs
R11590 T38189 T38186 pobj SACs,of
R11591 T38190 T38184 prep by,Rescue
R11592 T38191 T38192 compound E2f3a,deletion
R11593 T38192 T38190 pobj deletion,by
R11594 T38193 T38184 punct .,Rescue
R11595 T38195 T38196 amod Horizontal,sections
R11596 T38196 T38198 nsubjpass sections,stained
R11597 T38197 T38196 amod retinal,sections
R11598 T38199 T38196 prep of,sections
R11599 T38200 T38201 det the,genotypes
R11600 T38201 T38199 pobj genotypes,of
R11601 T38202 T38201 amod indicated,genotypes
R11602 T38203 T38201 cc and,genotypes
R11603 T38204 T38201 conj ages,genotypes
R11604 T38205 T38198 auxpass were,stained
R11605 T38206 T38198 prep for,stained
R11606 T38207 T38206 pobj nuclei,for
R11607 T38208 T38209 punct (,blue
R11608 T38209 T38207 parataxis blue,nuclei
R11609 T38210 T38209 dep DAPI,blue
R11610 T38211 T38209 punct ", ",blue
R11611 T38212 T38209 punct ),blue
R11612 T38213 T38207 punct ", ",nuclei
R11613 T38214 T38215 compound M,phase
R11614 T38215 T38207 conj phase,nuclei
R11615 T38216 T38215 punct -,phase
R11616 T38217 T38218 punct (,green
R11617 T38218 T38215 parataxis green,phase
R11618 T38219 T38218 dep PH3,green
R11619 T38220 T38218 punct ", ",green
R11620 T38221 T38218 punct ),green
R11621 T38222 T38215 punct ", ",phase
R11622 T38223 T38215 cc and,phase
R11623 T38224 T38225 det the,marker
R11624 T38225 T38215 conj marker,phase
R11625 T38226 T38225 compound SAC,marker
R11626 T38227 T38225 appos Slc18a3,marker
R11627 T38228 T38229 punct (,red
R11628 T38229 T38225 parataxis red,marker
R11629 T38230 T38229 punct ),red
R11630 T38231 T38198 punct .,stained
R11631 T38233 T38234 compound E2f3a,deletion
R11632 T38234 T38235 nsubj deletion,suppress
R11633 T38236 T38235 aux does,suppress
R11634 T38237 T38235 neg not,suppress
R11635 T38238 T38239 amod ectopic,division
R11636 T38239 T38235 dobj division,suppress
R11637 T38240 T38235 punct ", ",suppress
R11638 T38241 T38235 cc but,suppress
R11639 T38242 T38235 conj rescues,suppress
R11640 T38243 T38244 det the,defect
R11641 T38244 T38242 dobj defect,rescues
R11642 T38245 T38244 compound SAC,defect
R11643 T38246 T38235 punct .,suppress
R11644 T38248 T38249 compound Scale,bars
R11645 T38249 T38250 nsubj bars,are
R11646 T38251 T38252 nummod 50,μm
R11647 T38252 T38250 attr μm,are
R11648 T38253 T38250 punct .,are
R11649 T38256 T38255 punct ", ",M
R11650 T38257 T38258 amod molecular,size
R11651 T38258 T38259 compound size,marker
R11652 T38259 T38255 appos marker,M
R11653 T38260 T38255 punct .,M

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T37834 4-9 PR_EXT:000028775 denotes E2f3a
T37835 10-17 SO_EXT:0001060 denotes Isoform
T37836 29-44 GO_RO_EXT:developmental_differentiation_process denotes Differentiation
T37837 55-57 PR_EXT:000013773 denotes Rb
T37838 96-101 NCBITaxon:10088 denotes mouse
T37839 102-104 SO_EXT:wild_type_entity_or_quality denotes WT
T37840 106-111 PR_EXT:000028775 denotes E2f3a
T37841 111-112 SO_EXT:sequence_nullness_or_absence denotes −
T37842 113-114 SO_EXT:sequence_nullness_or_absence denotes −
T37843 128-138 GO_SO_EXT:sequence_rearrangement_process denotes recombined
T37844 139-145 SO:0000359 denotes floxed
T37845 146-150 PR_EXT:000006854 denotes E2f3
T37846 175-179 PR_EXT:000006854 denotes E2f3
T37847 179-180 SO_EXT:sequence_nullness_or_absence denotes −
T37848 181-182 SO_EXT:sequence_nullness_or_absence denotes −
T37849 200-205 PR_EXT:000028775 denotes E2f3a
T37850 205-206 SO_EXT:sequence_nullness_or_absence denotes −
T37851 207-208 SO_EXT:sequence_nullness_or_absence denotes −
T37852 209-213 NCBITaxon:10088 denotes mice
T37853 227-231 PR_EXT:000006854 denotes E2f3
T37854 232-236 SO_EXT:0000147 denotes exon
T37855 252-258 SO_EXT:0000188 denotes intron
T37856 300-307 SO_EXT:0000112 denotes primers
T37857 326-331 PR_EXT:000028775 denotes E2f3a
T37858 331-332 SO_EXT:normal_or_wild_type_or_present denotes +
T37859 333-334 SO_EXT:sequence_nullness_or_absence denotes −
T37860 335-340 NCBITaxon:10088 denotes mouse
T37861 368-370 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T37862 388-393 PR_EXT:000028775 denotes E2f3a
T37863 404-408 CHEBI_SO_EXT:mRNA denotes mRNA
T37864 416-422 UBERON:0000966 denotes retina
T37865 428-437 SO_EXT:biological_sequence denotes sequences
T37866 441-448 SO_EXT:0000112 denotes primers
T37867 558-560 SO_EXT:wild_type_entity_or_quality denotes WT
T37868 561-567 UBERON:0000966 denotes retina
T37869 568-577 GO:0010467 denotes expresses
T37870 583-588 PR_EXT:000028775 denotes E2f3a
T37871 599-603 CHEBI_SO_EXT:mRNA denotes mRNA
T37872 618-623 PR_EXT:000028775 denotes E2f3a
T37873 623-624 SO_EXT:sequence_nullness_or_absence denotes −
T37874 625-626 SO_EXT:sequence_nullness_or_absence denotes −
T37875 627-633 UBERON:0000966 denotes retina
T37876 640-645 PR_EXT:000028775 denotes E2f3a
T37877 646-650 CHEBI_SO_EXT:mRNA denotes mRNA
T37878 661-670 GO:0010467 denotes expresses
T37879 677-681 CHEBI_SO_EXT:mRNA denotes mRNA
T37880 683-687 PR_EXT:000006854 denotes E2f3
T37881 687-688 SO_EXT:sequence_nullness_or_absence denotes −
T37882 689-690 SO_EXT:sequence_nullness_or_absence denotes −
T37883 691-697 UBERON:0000966 denotes retina
T37884 716-721 PR_EXT:000028775 denotes E2f3a
T37885 732-737 CHEBI_SO_EXT:mRNA denotes mRNAs
T37886 751-760 GO:0010467 denotes expresses
T37887 763-772 SO_EXT:sequence_truncation_process denotes truncated
T37888 773-777 CHEBI_SO_EXT:mRNA denotes mRNA
T37889 786-790 SO_EXT:0000147 denotes exon
T37890 808-810 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T37891 827-830 PR_EXT:E2F denotes E2f
T37892 831-836 SO_EXT:0000704 denotes genes
T37893 843-850 UBERON:0000966 denotes retinas
T37894 868-877 SO_EXT:genotype_or_entity_with_genotype denotes genotypes
T37895 930-937 NCBITaxon:33208 denotes animals
T37896 995-997 SO_EXT:wild_type_entity_or_quality denotes WT
T37897 1016-1025 SO_EXT:genotype_or_entity_with_genotype denotes genotypes
T37898 1083-1089 SO_EXT:sequence_rescue_process denotes Rescue
T37899 1093-1095 PR_EXT:000013773 denotes Rb
T37900 1107-1112 PR_EXT:000028775 denotes E2f3a
T37901 1113-1121 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T37902 1134-1141 UBERON:0000966 denotes retinal
T37903 1168-1177 SO_EXT:genotype_or_entity_with_genotype denotes genotypes
T37904 1204-1210 GO:0005634 denotes nuclei
T37905 1212-1216 CHEBI:51231 denotes DAPI
T37906 1225-1232 GO:0000279 denotes M-phase
T37907 1259-1265 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T37908 1266-1273 PR_EXT:000014968 denotes Slc18a3
T37909 1281-1286 PR_EXT:000028775 denotes E2f3a
T37910 1287-1295 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T37911 1336-1343 SO_EXT:sequence_rescue_process denotes rescues
T37912 1382-1383 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes M
T37913 1385-1394 CHEBI_EXT:polyatomic_entity_or_group denotes molecular
T37914 1400-1406 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T37792 4-9 PR:000028775 denotes E2f3a
T37793 10-17 SO:0001060 denotes Isoform
T37794 55-57 PR:000013773 denotes Rb
T37795 96-101 NCBITaxon:10088 denotes mouse
T37796 106-111 PR:000028775 denotes E2f3a
T37797 139-145 SO:0000359 denotes floxed
T37798 146-150 PR:000006854 denotes E2f3
T37799 175-179 PR:000006854 denotes E2f3
T37800 200-205 PR:000028775 denotes E2f3a
T37801 209-213 NCBITaxon:10088 denotes mice
T37802 227-231 PR:000006854 denotes E2f3
T37803 232-236 SO:0000147 denotes exon
T37804 252-258 SO:0000188 denotes intron
T37805 300-307 SO:0000112 denotes primers
T37806 326-331 PR:000028775 denotes E2f3a
T37807 335-340 NCBITaxon:10088 denotes mouse
T37808 388-393 PR:000028775 denotes E2f3a
T37809 416-422 UBERON:0000966 denotes retina
T37810 441-448 SO:0000112 denotes primers
T37811 561-567 UBERON:0000966 denotes retina
T37812 568-577 GO:0010467 denotes expresses
T37813 583-588 PR:000028775 denotes E2f3a
T37814 618-623 PR:000028775 denotes E2f3a
T37815 627-633 UBERON:0000966 denotes retina
T37816 640-645 PR:000028775 denotes E2f3a
T37817 661-670 GO:0010467 denotes expresses
T37818 683-687 PR:000006854 denotes E2f3
T37819 691-697 UBERON:0000966 denotes retina
T37820 716-721 PR:000028775 denotes E2f3a
T37821 751-760 GO:0010467 denotes expresses
T37822 786-790 SO:0000147 denotes exon
T37823 831-836 SO:0000704 denotes genes
T37824 843-850 UBERON:0000966 denotes retinas
T37825 930-937 NCBITaxon:33208 denotes animals
T37826 1093-1095 PR:000013773 denotes Rb
T37827 1107-1112 PR:000028775 denotes E2f3a
T37828 1134-1141 UBERON:0000966 denotes retinal
T37829 1204-1210 GO:0005634 denotes nuclei
T37830 1212-1216 CHEBI:51231 denotes DAPI
T37831 1225-1232 GO:0000279 denotes M-phase
T37832 1266-1273 PR:000014968 denotes Slc18a3
T37833 1281-1286 PR:000028775 denotes E2f3a