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PMC:1914394 / 39301-40718 JSONTXT

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Id Subject Object Predicate Lexical cue
T37919 35-38 DT denotes the
T37920 55-61 NN denotes Defect
T37921 39-54 NN denotes Differentiation
T37922 62-64 IN denotes in
T37923 65-67 NN denotes Rb
T37915 10-13 DT denotes The
T37916 20-27 NN denotes Isoform
T37917 14-19 NN denotes E2f3a
T37918 28-34 VBZ denotes Drives
T37924 68-70 NN denotes KO
T37925 71-75 NNS denotes SACs
T37926 75-209 sentence denotes (A) Schematic diagrams of the mouse WT, E2f3a−/−, and the Cre-recombined floxed E2f3 loci (indicated here as E2f3−/− for simplicity).
T37927 76-77 -LRB- denotes (
T37928 77-78 LS denotes A
T37929 90-98 NNS denotes diagrams
T37930 78-79 -RRB- denotes )
T37931 80-89 JJ denotes Schematic
T37932 99-101 IN denotes of
T37933 102-105 DT denotes the
T37934 112-114 NN denotes WT
T37935 106-111 NN denotes mouse
T37936 114-116 , denotes ,
T37937 116-121 NN denotes E2f3a
T37938 121-122 SYM denotes −
T37939 122-123 HYPH denotes /
T37940 123-124 SYM denotes −
T37941 124-126 , denotes ,
T37942 126-129 CC denotes and
T37943 130-133 DT denotes the
T37944 161-165 NNS denotes loci
T37945 134-137 NN denotes Cre
T37946 137-138 HYPH denotes -
T37947 138-148 VBN denotes recombined
T37948 149-155 VBN denotes floxed
T37949 156-160 NN denotes E2f3
T37950 166-167 -LRB- denotes (
T37951 167-176 VBN denotes indicated
T37952 177-181 RB denotes here
T37953 182-184 IN denotes as
T37954 185-189 NN denotes E2f3
T37955 189-190 SYM denotes −
T37956 190-191 HYPH denotes /
T37957 191-192 SYM denotes −
T37958 193-196 IN denotes for
T37959 197-207 NN denotes simplicity
T37960 207-208 -RRB- denotes )
T37961 208-209 . denotes .
T37962 209-289 sentence denotes E2f3a−/− mice lack most of E2f3 exon 1a and part of intron 1a (red dotted box).
T37963 210-215 NN denotes E2f3a
T37964 219-223 NNS denotes mice
T37965 215-216 SYM denotes −
T37966 216-217 HYPH denotes /
T37967 217-218 SYM denotes −
T37968 224-228 VBP denotes lack
T37969 229-233 JJS denotes most
T37970 234-236 IN denotes of
T37971 237-241 NN denotes E2f3
T37972 247-249 NN denotes 1a
T37973 242-246 NN denotes exon
T37974 250-253 CC denotes and
T37975 254-258 NN denotes part
T37976 259-261 IN denotes of
T37977 262-268 NN denotes intron
T37978 269-271 NN denotes 1a
T37979 272-273 -LRB- denotes (
T37980 284-287 NN denotes box
T37981 273-276 JJ denotes red
T37982 277-283 VBN denotes dotted
T37983 287-288 -RRB- denotes )
T37984 288-289 . denotes .
T37985 289-318 sentence denotes Arrows indicate PCR primers.
T37986 290-296 NNS denotes Arrows
T37987 297-305 VBP denotes indicate
T37988 306-309 NN denotes PCR
T37989 310-317 NNS denotes primers
T37990 317-318 . denotes .
T37991 318-373 sentence denotes Genotyping of an E2f3a+/− mouse is shown on the right.
T37992 319-329 NN denotes Genotyping
T37993 354-359 VBN denotes shown
T37994 330-332 IN denotes of
T37995 333-335 DT denotes an
T37996 345-350 NN denotes mouse
T37997 336-341 NN denotes E2f3a
T37998 341-342 SYM denotes +
T37999 342-343 HYPH denotes /
T38000 343-344 SYM denotes −
T38001 351-353 VBZ denotes is
T38002 360-362 IN denotes on
T38003 363-366 DT denotes the
T38004 367-372 NN denotes right
T38005 372-373 . denotes .
T38006 373-433 sentence denotes (B) RT-PCR detection of E2f3a and E2f3b mRNA in the retina.
T38007 374-375 -LRB- denotes (
T38008 375-376 LS denotes B
T38009 385-394 NN denotes detection
T38010 376-377 -RRB- denotes )
T38011 378-380 NN denotes RT
T38012 381-384 NN denotes PCR
T38013 380-381 HYPH denotes -
T38014 395-397 IN denotes of
T38015 398-403 NN denotes E2f3a
T38016 414-418 NN denotes mRNA
T38017 404-407 CC denotes and
T38018 408-413 NN denotes E2f3b
T38019 419-421 IN denotes in
T38020 422-425 DT denotes the
T38021 426-432 NN denotes retina
T38022 432-433 . denotes .
T38023 433-567 sentence denotes The sequences of primers are 1aF (5′-GCCTCTACACCACGCCACAAG-3′), 1bF (5′-CGGAAATGCCCTTACAGC-3′), and 4R (5′-CTCAGTCACTTCTTTGGACAG-3′).
T38024 434-437 DT denotes The
T38025 438-447 NNS denotes sequences
T38026 459-462 VBP denotes are
T38027 448-450 IN denotes of
T38028 451-458 NNS denotes primers
T38029 463-466 NN denotes 1aF
T38030 467-468 -LRB- denotes (
T38031 468-469 CD denotes 5
T38032 471-492 NN denotes GCCTCTACACCACGCCACAAG
T38033 469-470 SYM denotes ′
T38034 470-471 HYPH denotes -
T38035 492-493 HYPH denotes -
T38036 493-494 CD denotes 3
T38037 494-495 SYM denotes ′
T38038 495-496 -RRB- denotes )
T38039 496-498 , denotes ,
T38040 498-501 NN denotes 1bF
T38041 502-503 -LRB- denotes (
T38042 503-504 CD denotes 5
T38043 506-524 NN denotes CGGAAATGCCCTTACAGC
T38044 504-505 SYM denotes ′
T38045 505-506 HYPH denotes -
T38046 524-525 HYPH denotes -
T38047 525-526 CD denotes 3
T38048 526-527 SYM denotes ′
T38049 527-528 -RRB- denotes )
T38050 528-530 , denotes ,
T38051 530-533 CC denotes and
T38052 534-536 NN denotes 4R
T38053 537-538 -LRB- denotes (
T38054 538-539 CD denotes 5
T38055 541-562 NN denotes CTCAGTCACTTCTTTGGACAG
T38056 539-540 SYM denotes ′
T38057 540-541 HYPH denotes -
T38058 562-563 HYPH denotes -
T38059 563-564 CD denotes 3
T38060 564-565 SYM denotes ′
T38061 565-566 -RRB- denotes )
T38062 566-567 . denotes .
T38063 567-614 sentence denotes WT retina expresses both E2f3a and E2f3b mRNA.
T38064 568-570 NN denotes WT
T38065 571-577 NN denotes retina
T38066 578-587 VBZ denotes expresses
T38067 588-592 CC denotes both
T38068 593-598 NN denotes E2f3a
T38069 609-613 NN denotes mRNA
T38070 599-602 CC denotes and
T38071 603-608 NN denotes E2f3b
T38072 613-614 . denotes .
T38073 614-692 sentence denotes As expected, E2f3a−/− retina lacks E2f3a mRNA and still expresses E2f3b mRNA.
T38074 615-617 IN denotes As
T38075 618-626 VBN denotes expected
T38076 644-649 VBZ denotes lacks
T38077 626-628 , denotes ,
T38078 628-633 NN denotes E2f3a
T38079 637-643 NN denotes retina
T38080 633-634 SYM denotes −
T38081 634-635 HYPH denotes /
T38082 635-636 SYM denotes −
T38083 650-655 NN denotes E2f3a
T38084 656-660 NN denotes mRNA
T38085 661-664 CC denotes and
T38086 665-670 RB denotes still
T38087 671-680 VBZ denotes expresses
T38088 681-686 NN denotes E2f3b
T38089 687-691 NN denotes mRNA
T38090 691-692 . denotes .
T38091 692-803 sentence denotes E2f3−/− retina lacks full-length E2f3a and E2f3b mRNAs, and instead expresses a truncated mRNA lacking exon 3.
T38092 693-697 NN denotes E2f3
T38093 701-707 NN denotes retina
T38094 697-698 SYM denotes −
T38095 698-699 HYPH denotes /
T38096 699-700 SYM denotes −
T38097 708-713 VBZ denotes lacks
T38098 714-718 JJ denotes full
T38099 719-725 NN denotes length
T38100 718-719 HYPH denotes -
T38101 742-747 NNS denotes mRNAs
T38102 726-731 NN denotes E2f3a
T38103 732-735 CC denotes and
T38104 736-741 NN denotes E2f3b
T38105 747-749 , denotes ,
T38106 749-752 CC denotes and
T38107 753-760 RB denotes instead
T38108 761-770 VBZ denotes expresses
T38109 771-772 DT denotes a
T38110 783-787 NN denotes mRNA
T38111 773-782 VBN denotes truncated
T38112 788-795 VBG denotes lacking
T38113 796-800 NN denotes exon
T38114 801-802 CD denotes 3
T38115 802-803 . denotes .
T38116 803-888 sentence denotes (C) Real-time RT-PCR analysis of E2f genes in P8 retinas of the indicated genotypes.
T38117 804-805 -LRB- denotes (
T38118 805-806 LS denotes C
T38119 825-833 NN denotes analysis
T38120 806-807 -RRB- denotes )
T38121 808-812 JJ denotes Real
T38122 813-817 NN denotes time
T38123 812-813 HYPH denotes -
T38124 818-820 NN denotes RT
T38125 821-824 NN denotes PCR
T38126 820-821 HYPH denotes -
T38127 834-836 IN denotes of
T38128 837-840 NN denotes E2f
T38129 841-846 NNS denotes genes
T38130 847-849 IN denotes in
T38131 850-852 NN denotes P8
T38132 853-860 NNS denotes retinas
T38133 861-863 IN denotes of
T38134 864-867 DT denotes the
T38135 878-887 NNS denotes genotypes
T38136 868-877 VBN denotes indicated
T38137 887-888 . denotes .
T38138 888-1088 sentence denotes Error bars represent SD of measurements from three animals, and asterisks indicate a significant difference between WT and the indicated genotypes (*, p <0.05; **; p <0.01; ANOVA and Tukey HSD test).
T38139 889-894 NN denotes Error
T38140 895-899 NNS denotes bars
T38141 900-909 VBP denotes represent
T38142 910-912 NN denotes SD
T38143 913-915 IN denotes of
T38144 916-928 NNS denotes measurements
T38145 929-933 IN denotes from
T38146 934-939 CD denotes three
T38147 940-947 NNS denotes animals
T38148 947-949 , denotes ,
T38149 949-952 CC denotes and
T38150 953-962 NNS denotes asterisks
T38151 963-971 VBP denotes indicate
T38152 972-973 DT denotes a
T38153 986-996 NN denotes difference
T38154 974-985 JJ denotes significant
T38155 997-1004 IN denotes between
T38156 1005-1007 NN denotes WT
T38157 1008-1011 CC denotes and
T38158 1012-1015 DT denotes the
T38159 1016-1025 VBN denotes indicated
T38160 1026-1035 NNS denotes genotypes
T38161 1036-1037 -LRB- denotes (
T38162 1082-1086 NN denotes test
T38163 1037-1038 SYM denotes *
T38164 1043-1047 CD denotes 0.05
T38165 1038-1040 , denotes ,
T38166 1040-1041 NN denotes p
T38167 1042-1043 SYM denotes <
T38168 1047-1048 : denotes ;
T38169 1049-1051 SYM denotes **
T38170 1056-1060 CD denotes 0.01
T38171 1051-1052 : denotes ;
T38172 1053-1054 NN denotes p
T38173 1055-1056 SYM denotes <
T38174 1060-1061 : denotes ;
T38175 1062-1067 NN denotes ANOVA
T38176 1068-1071 CC denotes and
T38177 1072-1077 NNP denotes Tukey
T38178 1078-1081 NN denotes HSD
T38179 1086-1087 -RRB- denotes )
T38180 1087-1088 . denotes .
T38181 1088-1132 sentence denotes (D) Rescue of Rb KO SACs by E2f3a deletion.
T38182 1089-1090 -LRB- denotes (
T38183 1090-1091 LS denotes D
T38184 1093-1099 NN denotes Rescue
T38185 1091-1092 -RRB- denotes )
T38186 1100-1102 IN denotes of
T38187 1103-1105 NN denotes Rb
T38188 1106-1108 NN denotes KO
T38189 1109-1113 NNS denotes SACs
T38190 1114-1116 IN denotes by
T38191 1117-1122 NN denotes E2f3a
T38192 1123-1131 NN denotes deletion
T38193 1131-1132 . denotes .
T38194 1132-1290 sentence denotes Horizontal retinal sections of the indicated genotypes and ages were stained for nuclei (DAPI, blue), M-phase (PH3, green), and the SAC marker Slc18a3 (red).
T38195 1133-1143 JJ denotes Horizontal
T38196 1152-1160 NNS denotes sections
T38197 1144-1151 JJ denotes retinal
T38198 1202-1209 VBN denotes stained
T38199 1161-1163 IN denotes of
T38200 1164-1167 DT denotes the
T38201 1178-1187 NNS denotes genotypes
T38202 1168-1177 VBN denotes indicated
T38203 1188-1191 CC denotes and
T38204 1192-1196 NNS denotes ages
T38205 1197-1201 VBD denotes were
T38206 1210-1213 IN denotes for
T38207 1214-1220 NNS denotes nuclei
T38208 1221-1222 -LRB- denotes (
T38209 1228-1232 JJ denotes blue
T38210 1222-1226 NN denotes DAPI
T38211 1226-1228 , denotes ,
T38212 1232-1233 -RRB- denotes )
T38213 1233-1235 , denotes ,
T38214 1235-1236 NN denotes M
T38215 1237-1242 NN denotes phase
T38216 1236-1237 HYPH denotes -
T38217 1243-1244 -LRB- denotes (
T38218 1249-1254 JJ denotes green
T38219 1244-1247 NN denotes PH3
T38220 1247-1249 , denotes ,
T38221 1254-1255 -RRB- denotes )
T38222 1255-1257 , denotes ,
T38223 1257-1260 CC denotes and
T38224 1261-1264 DT denotes the
T38225 1269-1275 NN denotes marker
T38226 1265-1268 NN denotes SAC
T38227 1276-1283 NN denotes Slc18a3
T38228 1284-1285 -LRB- denotes (
T38229 1285-1288 JJ denotes red
T38230 1288-1289 -RRB- denotes )
T38231 1289-1290 . denotes .
T38232 1290-1369 sentence denotes E2f3a deletion does not suppress ectopic division, but rescues the SAC defect.
T38233 1291-1296 NN denotes E2f3a
T38234 1297-1305 NN denotes deletion
T38235 1315-1323 VB denotes suppress
T38236 1306-1310 VBZ denotes does
T38237 1311-1314 RB denotes not
T38238 1324-1331 JJ denotes ectopic
T38239 1332-1340 NN denotes division
T38240 1340-1342 , denotes ,
T38241 1342-1345 CC denotes but
T38242 1346-1353 VBZ denotes rescues
T38243 1354-1357 DT denotes the
T38244 1362-1368 NN denotes defect
T38245 1358-1361 NN denotes SAC
T38246 1368-1369 . denotes .
T38247 1369-1391 sentence denotes Scale bars are 50 μm.
T38248 1370-1375 NN denotes Scale
T38249 1376-1380 NNS denotes bars
T38250 1381-1384 VBP denotes are
T38251 1385-1387 CD denotes 50
T38252 1388-1390 NN denotes μm
T38253 1390-1391 . denotes .
T38254 1391-1417 sentence denotes M, molecular size marker.
T38255 1392-1393 NN denotes M
T38256 1393-1395 , denotes ,
T38257 1395-1404 JJ denotes molecular
T38258 1405-1409 NN denotes size
T38259 1410-1416 NN denotes marker
T38260 1416-1417 . denotes .
R11341 T37915 T37916 det The,Isoform
R11342 T37916 T37918 nsubj Isoform,Drives
R11343 T37917 T37916 compound E2f3a,Isoform
R11344 T37919 T37920 det the,Defect
R11345 T37920 T37918 dobj Defect,Drives
R11346 T37921 T37920 compound Differentiation,Defect
R11347 T37922 T37918 prep in,Drives
R11348 T37923 T37924 compound Rb,KO
R11349 T37924 T37925 compound KO,SACs
R11350 T37925 T37922 pobj SACs,in
R11351 T37927 T37928 punct (,A
R11352 T37928 T37929 meta A,diagrams
R11353 T37930 T37928 punct ),A
R11354 T37931 T37929 amod Schematic,diagrams
R11355 T37932 T37929 prep of,diagrams
R11356 T37933 T37934 det the,WT
R11357 T37934 T37932 pobj WT,of
R11358 T37935 T37934 compound mouse,WT
R11359 T37936 T37934 punct ", ",WT
R11360 T37937 T37934 conj E2f3a,WT
R11361 T37938 T37937 punct −,E2f3a
R11362 T37939 T37937 punct /,E2f3a
R11363 T37940 T37937 punct −,E2f3a
R11364 T37941 T37937 punct ", ",E2f3a
R11365 T37942 T37937 cc and,E2f3a
R11366 T37943 T37944 det the,loci
R11367 T37944 T37937 conj loci,E2f3a
R11368 T37945 T37944 nmod Cre,loci
R11369 T37946 T37945 punct -,Cre
R11370 T37947 T37945 amod recombined,Cre
R11371 T37948 T37944 amod floxed,loci
R11372 T37949 T37944 compound E2f3,loci
R11373 T37950 T37944 punct (,loci
R11374 T37951 T37944 acl indicated,loci
R11375 T37952 T37951 advmod here,indicated
R11376 T37953 T37951 prep as,indicated
R11377 T37954 T37953 pobj E2f3,as
R11378 T37955 T37954 punct −,E2f3
R11379 T37956 T37954 punct /,E2f3
R11380 T37957 T37954 punct −,E2f3
R11381 T37958 T37951 prep for,indicated
R11382 T37959 T37958 pobj simplicity,for
R11383 T37960 T37929 punct ),diagrams
R11384 T37961 T37929 punct .,diagrams
R11385 T37963 T37964 nmod E2f3a,mice
R11386 T37964 T37968 nsubj mice,lack
R11387 T37965 T37963 punct −,E2f3a
R11388 T37966 T37963 punct /,E2f3a
R11389 T37967 T37963 punct −,E2f3a
R11390 T37969 T37968 dobj most,lack
R11391 T37970 T37969 prep of,most
R11392 T37971 T37972 compound E2f3,1a
R11393 T37972 T37970 pobj 1a,of
R11394 T37973 T37972 compound exon,1a
R11395 T37974 T37969 cc and,most
R11396 T37975 T37969 conj part,most
R11397 T37976 T37975 prep of,part
R11398 T37977 T37978 compound intron,1a
R11399 T37978 T37976 pobj 1a,of
R11400 T37979 T37980 punct (,box
R11401 T37980 T37968 parataxis box,lack
R11402 T37981 T37980 amod red,box
R11403 T37982 T37980 amod dotted,box
R11404 T37983 T37980 punct ),box
R11405 T37984 T37968 punct .,lack
R11406 T37986 T37987 nsubj Arrows,indicate
R11407 T37988 T37989 compound PCR,primers
R11408 T37989 T37987 dobj primers,indicate
R11409 T37990 T37987 punct .,indicate
R11410 T37992 T37993 nsubjpass Genotyping,shown
R11411 T37994 T37992 prep of,Genotyping
R11412 T37995 T37996 det an,mouse
R11413 T37996 T37994 pobj mouse,of
R11414 T37997 T37996 nmod E2f3a,mouse
R11415 T37998 T37997 punct +,E2f3a
R11416 T37999 T37997 punct /,E2f3a
R11417 T38000 T37997 punct −,E2f3a
R11418 T38001 T37993 auxpass is,shown
R11419 T38002 T37993 prep on,shown
R11420 T38003 T38004 det the,right
R11421 T38004 T38002 pobj right,on
R11422 T38005 T37993 punct .,shown
R11423 T38007 T38008 punct (,B
R11424 T38008 T38009 meta B,detection
R11425 T38010 T38008 punct ),B
R11426 T38011 T38012 compound RT,PCR
R11427 T38012 T38009 compound PCR,detection
R11428 T38013 T38012 punct -,PCR
R11429 T38014 T38009 prep of,detection
R11430 T38015 T38016 nmod E2f3a,mRNA
R11431 T38016 T38014 pobj mRNA,of
R11432 T38017 T38015 cc and,E2f3a
R11433 T38018 T38015 conj E2f3b,E2f3a
R11434 T38019 T38009 prep in,detection
R11435 T38020 T38021 det the,retina
R11436 T38021 T38019 pobj retina,in
R11437 T38022 T38009 punct .,detection
R11438 T38024 T38025 det The,sequences
R11439 T38025 T38026 nsubj sequences,are
R11440 T38027 T38025 prep of,sequences
R11441 T38028 T38027 pobj primers,of
R11442 T38029 T38026 attr 1aF,are
R11443 T38030 T38029 punct (,1aF
R11444 T38031 T38032 nummod 5,GCCTCTACACCACGCCACAAG
R11445 T38032 T38029 appos GCCTCTACACCACGCCACAAG,1aF
R11446 T38033 T38031 punct ′,5
R11447 T38034 T38032 punct -,GCCTCTACACCACGCCACAAG
R11448 T38035 T38032 punct -,GCCTCTACACCACGCCACAAG
R11449 T38036 T38032 nummod 3,GCCTCTACACCACGCCACAAG
R11450 T38037 T38032 punct ′,GCCTCTACACCACGCCACAAG
R11451 T38038 T38029 punct ),1aF
R11452 T38039 T38029 punct ", ",1aF
R11453 T38040 T38029 conj 1bF,1aF
R11454 T38041 T38040 punct (,1bF
R11455 T38042 T38043 nummod 5,CGGAAATGCCCTTACAGC
R11456 T38043 T38040 appos CGGAAATGCCCTTACAGC,1bF
R11457 T38044 T38042 punct ′,5
R11458 T38045 T38043 punct -,CGGAAATGCCCTTACAGC
R11459 T38046 T38043 punct -,CGGAAATGCCCTTACAGC
R11460 T38047 T38043 nummod 3,CGGAAATGCCCTTACAGC
R11461 T38048 T38043 punct ′,CGGAAATGCCCTTACAGC
R11462 T38049 T38040 punct ),1bF
R11463 T38050 T38040 punct ", ",1bF
R11464 T38051 T38040 cc and,1bF
R11465 T38052 T38040 conj 4R,1bF
R11466 T38053 T38052 punct (,4R
R11467 T38054 T38055 nummod 5,CTCAGTCACTTCTTTGGACAG
R11468 T38055 T38052 appos CTCAGTCACTTCTTTGGACAG,4R
R11469 T38056 T38054 punct ′,5
R11470 T38057 T38055 punct -,CTCAGTCACTTCTTTGGACAG
R11471 T38058 T38055 punct -,CTCAGTCACTTCTTTGGACAG
R11472 T38059 T38055 nummod 3,CTCAGTCACTTCTTTGGACAG
R11473 T38060 T38055 punct ′,CTCAGTCACTTCTTTGGACAG
R11474 T38061 T38026 punct ),are
R11475 T38062 T38026 punct .,are
R11476 T38064 T38065 compound WT,retina
R11477 T38065 T38066 nsubj retina,expresses
R11478 T38067 T38068 preconj both,E2f3a
R11479 T38068 T38069 nmod E2f3a,mRNA
R11480 T38069 T38066 dobj mRNA,expresses
R11481 T38070 T38068 cc and,E2f3a
R11482 T38071 T38068 conj E2f3b,E2f3a
R11483 T38072 T38066 punct .,expresses
R11484 T38074 T38075 mark As,expected
R11485 T38075 T38076 advcl expected,lacks
R11486 T38077 T38076 punct ", ",lacks
R11487 T38078 T38079 nmod E2f3a,retina
R11488 T38079 T38076 nsubj retina,lacks
R11489 T38080 T38078 punct −,E2f3a
R11490 T38081 T38078 punct /,E2f3a
R11491 T38082 T38078 punct −,E2f3a
R11492 T38083 T38084 compound E2f3a,mRNA
R11493 T38084 T38076 dobj mRNA,lacks
R11494 T38085 T38076 cc and,lacks
R11495 T38086 T38087 advmod still,expresses
R11496 T38087 T38076 conj expresses,lacks
R11497 T38088 T38089 compound E2f3b,mRNA
R11498 T38089 T38087 dobj mRNA,expresses
R11499 T38090 T38076 punct .,lacks
R11500 T38092 T38093 nmod E2f3,retina
R11501 T38093 T38097 nsubj retina,lacks
R11502 T38094 T38092 punct −,E2f3
R11503 T38095 T38092 punct /,E2f3
R11504 T38096 T38092 punct −,E2f3
R11505 T38098 T38099 amod full,length
R11506 T38099 T38101 nmod length,mRNAs
R11507 T38100 T38099 punct -,length
R11508 T38101 T38097 dobj mRNAs,lacks
R11509 T38102 T38101 nmod E2f3a,mRNAs
R11510 T38103 T38102 cc and,E2f3a
R11511 T38104 T38102 conj E2f3b,E2f3a
R11512 T38105 T38097 punct ", ",lacks
R11513 T38106 T38097 cc and,lacks
R11514 T38107 T38108 advmod instead,expresses
R11515 T38108 T38097 conj expresses,lacks
R11516 T38109 T38110 det a,mRNA
R11517 T38110 T38108 dobj mRNA,expresses
R11518 T38111 T38110 amod truncated,mRNA
R11519 T38112 T38110 acl lacking,mRNA
R11520 T38113 T38112 dobj exon,lacking
R11521 T38114 T38113 nummod 3,exon
R11522 T38115 T38097 punct .,lacks
R11523 T38117 T38118 punct (,C
R11524 T38118 T38119 meta C,analysis
R11525 T38120 T38118 punct ),C
R11526 T38121 T38122 amod Real,time
R11527 T38122 T38119 compound time,analysis
R11528 T38123 T38122 punct -,time
R11529 T38124 T38125 compound RT,PCR
R11530 T38125 T38119 compound PCR,analysis
R11531 T38126 T38125 punct -,PCR
R11532 T38127 T38119 prep of,analysis
R11533 T38128 T38129 compound E2f,genes
R11534 T38129 T38127 pobj genes,of
R11535 T38130 T38119 prep in,analysis
R11536 T38131 T38132 compound P8,retinas
R11537 T38132 T38130 pobj retinas,in
R11538 T38133 T38132 prep of,retinas
R11539 T38134 T38135 det the,genotypes
R11540 T38135 T38133 pobj genotypes,of
R11541 T38136 T38135 amod indicated,genotypes
R11542 T38137 T38119 punct .,analysis
R11543 T38139 T38140 compound Error,bars
R11544 T38140 T38141 nsubj bars,represent
R11545 T38142 T38141 dobj SD,represent
R11546 T38143 T38142 prep of,SD
R11547 T38144 T38143 pobj measurements,of
R11548 T38145 T38144 prep from,measurements
R11549 T38146 T38147 nummod three,animals
R11550 T38147 T38145 pobj animals,from
R11551 T38148 T38141 punct ", ",represent
R11552 T38149 T38141 cc and,represent
R11553 T38150 T38151 nsubj asterisks,indicate
R11554 T38151 T38141 conj indicate,represent
R11555 T38152 T38153 det a,difference
R11556 T38153 T38151 dobj difference,indicate
R11557 T38154 T38153 amod significant,difference
R11558 T38155 T38153 prep between,difference
R11559 T38156 T38155 pobj WT,between
R11560 T38157 T38156 cc and,WT
R11561 T38158 T38159 det the,indicated
R11562 T38159 T38160 nmod indicated,genotypes
R11563 T38160 T38156 conj genotypes,WT
R11564 T38161 T38162 punct (,test
R11565 T38162 T38153 parataxis test,difference
R11566 T38163 T38164 punct *,0.05
R11567 T38164 T38162 ccomp 0.05,test
R11568 T38165 T38164 punct ", ",0.05
R11569 T38166 T38164 nsubj p,0.05
R11570 T38167 T38164 punct <,0.05
R11571 T38168 T38162 punct ;,test
R11572 T38169 T38170 punct **,0.01
R11573 T38170 T38162 ccomp 0.01,test
R11574 T38171 T38170 punct ;,0.01
R11575 T38172 T38170 nsubj p,0.01
R11576 T38173 T38170 punct <,0.01
R11577 T38174 T38162 punct ;,test
R11578 T38175 T38162 nmod ANOVA,test
R11579 T38176 T38175 cc and,ANOVA
R11580 T38177 T38178 compound Tukey,HSD
R11581 T38178 T38175 conj HSD,ANOVA
R11582 T38179 T38162 punct ),test
R11583 T38180 T38151 punct .,indicate
R11584 T38182 T38183 punct (,D
R11585 T38183 T38184 meta D,Rescue
R11586 T38185 T38183 punct ),D
R11587 T38186 T38184 prep of,Rescue
R11588 T38187 T38188 compound Rb,KO
R11589 T38188 T38189 compound KO,SACs
R11590 T38189 T38186 pobj SACs,of
R11591 T38190 T38184 prep by,Rescue
R11592 T38191 T38192 compound E2f3a,deletion
R11593 T38192 T38190 pobj deletion,by
R11594 T38193 T38184 punct .,Rescue
R11595 T38195 T38196 amod Horizontal,sections
R11596 T38196 T38198 nsubjpass sections,stained
R11597 T38197 T38196 amod retinal,sections
R11598 T38199 T38196 prep of,sections
R11599 T38200 T38201 det the,genotypes
R11600 T38201 T38199 pobj genotypes,of
R11601 T38202 T38201 amod indicated,genotypes
R11602 T38203 T38201 cc and,genotypes
R11603 T38204 T38201 conj ages,genotypes
R11604 T38205 T38198 auxpass were,stained
R11605 T38206 T38198 prep for,stained
R11606 T38207 T38206 pobj nuclei,for
R11607 T38208 T38209 punct (,blue
R11608 T38209 T38207 parataxis blue,nuclei
R11609 T38210 T38209 dep DAPI,blue
R11610 T38211 T38209 punct ", ",blue
R11611 T38212 T38209 punct ),blue
R11612 T38213 T38207 punct ", ",nuclei
R11613 T38214 T38215 compound M,phase
R11614 T38215 T38207 conj phase,nuclei
R11615 T38216 T38215 punct -,phase
R11616 T38217 T38218 punct (,green
R11617 T38218 T38215 parataxis green,phase
R11618 T38219 T38218 dep PH3,green
R11619 T38220 T38218 punct ", ",green
R11620 T38221 T38218 punct ),green
R11621 T38222 T38215 punct ", ",phase
R11622 T38223 T38215 cc and,phase
R11623 T38224 T38225 det the,marker
R11624 T38225 T38215 conj marker,phase
R11625 T38226 T38225 compound SAC,marker
R11626 T38227 T38225 appos Slc18a3,marker
R11627 T38228 T38229 punct (,red
R11628 T38229 T38225 parataxis red,marker
R11629 T38230 T38229 punct ),red
R11630 T38231 T38198 punct .,stained
R11631 T38233 T38234 compound E2f3a,deletion
R11632 T38234 T38235 nsubj deletion,suppress
R11633 T38236 T38235 aux does,suppress
R11634 T38237 T38235 neg not,suppress
R11635 T38238 T38239 amod ectopic,division
R11636 T38239 T38235 dobj division,suppress
R11637 T38240 T38235 punct ", ",suppress
R11638 T38241 T38235 cc but,suppress
R11639 T38242 T38235 conj rescues,suppress
R11640 T38243 T38244 det the,defect
R11641 T38244 T38242 dobj defect,rescues
R11642 T38245 T38244 compound SAC,defect
R11643 T38246 T38235 punct .,suppress
R11644 T38248 T38249 compound Scale,bars
R11645 T38249 T38250 nsubj bars,are
R11646 T38251 T38252 nummod 50,μm
R11647 T38252 T38250 attr μm,are
R11648 T38253 T38250 punct .,are
R11649 T38256 T38255 punct ", ",M
R11650 T38257 T38258 amod molecular,size
R11651 T38258 T38259 compound size,marker
R11652 T38259 T38255 appos marker,M
R11653 T38260 T38255 punct .,M

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T37834 14-19 PR_EXT:000028775 denotes E2f3a
T37835 20-27 SO_EXT:0001060 denotes Isoform
T37836 39-54 GO_RO_EXT:developmental_differentiation_process denotes Differentiation
T37837 65-67 PR_EXT:000013773 denotes Rb
T37838 106-111 NCBITaxon:10088 denotes mouse
T37839 112-114 SO_EXT:wild_type_entity_or_quality denotes WT
T37840 116-121 PR_EXT:000028775 denotes E2f3a
T37841 121-122 SO_EXT:sequence_nullness_or_absence denotes −
T37842 123-124 SO_EXT:sequence_nullness_or_absence denotes −
T37843 138-148 GO_SO_EXT:sequence_rearrangement_process denotes recombined
T37844 149-155 SO:0000359 denotes floxed
T37845 156-160 PR_EXT:000006854 denotes E2f3
T37846 185-189 PR_EXT:000006854 denotes E2f3
T37847 189-190 SO_EXT:sequence_nullness_or_absence denotes −
T37848 191-192 SO_EXT:sequence_nullness_or_absence denotes −
T37849 210-215 PR_EXT:000028775 denotes E2f3a
T37850 215-216 SO_EXT:sequence_nullness_or_absence denotes −
T37851 217-218 SO_EXT:sequence_nullness_or_absence denotes −
T37852 219-223 NCBITaxon:10088 denotes mice
T37853 237-241 PR_EXT:000006854 denotes E2f3
T37854 242-246 SO_EXT:0000147 denotes exon
T37855 262-268 SO_EXT:0000188 denotes intron
T37856 310-317 SO_EXT:0000112 denotes primers
T37857 336-341 PR_EXT:000028775 denotes E2f3a
T37858 341-342 SO_EXT:normal_or_wild_type_or_present denotes +
T37859 343-344 SO_EXT:sequence_nullness_or_absence denotes −
T37860 345-350 NCBITaxon:10088 denotes mouse
T37861 378-380 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T37862 398-403 PR_EXT:000028775 denotes E2f3a
T37863 414-418 CHEBI_SO_EXT:mRNA denotes mRNA
T37864 426-432 UBERON:0000966 denotes retina
T37865 438-447 SO_EXT:biological_sequence denotes sequences
T37866 451-458 SO_EXT:0000112 denotes primers
T37867 568-570 SO_EXT:wild_type_entity_or_quality denotes WT
T37868 571-577 UBERON:0000966 denotes retina
T37869 578-587 GO:0010467 denotes expresses
T37870 593-598 PR_EXT:000028775 denotes E2f3a
T37871 609-613 CHEBI_SO_EXT:mRNA denotes mRNA
T37872 628-633 PR_EXT:000028775 denotes E2f3a
T37873 633-634 SO_EXT:sequence_nullness_or_absence denotes −
T37874 635-636 SO_EXT:sequence_nullness_or_absence denotes −
T37875 637-643 UBERON:0000966 denotes retina
T37876 650-655 PR_EXT:000028775 denotes E2f3a
T37877 656-660 CHEBI_SO_EXT:mRNA denotes mRNA
T37878 671-680 GO:0010467 denotes expresses
T37879 687-691 CHEBI_SO_EXT:mRNA denotes mRNA
T37880 693-697 PR_EXT:000006854 denotes E2f3
T37881 697-698 SO_EXT:sequence_nullness_or_absence denotes −
T37882 699-700 SO_EXT:sequence_nullness_or_absence denotes −
T37883 701-707 UBERON:0000966 denotes retina
T37884 726-731 PR_EXT:000028775 denotes E2f3a
T37885 742-747 CHEBI_SO_EXT:mRNA denotes mRNAs
T37886 761-770 GO:0010467 denotes expresses
T37887 773-782 SO_EXT:sequence_truncation_process denotes truncated
T37888 783-787 CHEBI_SO_EXT:mRNA denotes mRNA
T37889 796-800 SO_EXT:0000147 denotes exon
T37890 818-820 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T37891 837-840 PR_EXT:E2F denotes E2f
T37892 841-846 SO_EXT:0000704 denotes genes
T37893 853-860 UBERON:0000966 denotes retinas
T37894 878-887 SO_EXT:genotype_or_entity_with_genotype denotes genotypes
T37895 940-947 NCBITaxon:33208 denotes animals
T37896 1005-1007 SO_EXT:wild_type_entity_or_quality denotes WT
T37897 1026-1035 SO_EXT:genotype_or_entity_with_genotype denotes genotypes
T37898 1093-1099 SO_EXT:sequence_rescue_process denotes Rescue
T37899 1103-1105 PR_EXT:000013773 denotes Rb
T37900 1117-1122 PR_EXT:000028775 denotes E2f3a
T37901 1123-1131 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T37902 1144-1151 UBERON:0000966 denotes retinal
T37903 1178-1187 SO_EXT:genotype_or_entity_with_genotype denotes genotypes
T37904 1214-1220 GO:0005634 denotes nuclei
T37905 1222-1226 CHEBI:51231 denotes DAPI
T37906 1235-1242 GO:0000279 denotes M-phase
T37907 1269-1275 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T37908 1276-1283 PR_EXT:000014968 denotes Slc18a3
T37909 1291-1296 PR_EXT:000028775 denotes E2f3a
T37910 1297-1305 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T37911 1346-1353 SO_EXT:sequence_rescue_process denotes rescues
T37912 1392-1393 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes M
T37913 1395-1404 CHEBI_EXT:polyatomic_entity_or_group denotes molecular
T37914 1410-1416 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T37792 14-19 PR:000028775 denotes E2f3a
T37793 20-27 SO:0001060 denotes Isoform
T37794 65-67 PR:000013773 denotes Rb
T37795 106-111 NCBITaxon:10088 denotes mouse
T37796 116-121 PR:000028775 denotes E2f3a
T37797 149-155 SO:0000359 denotes floxed
T37798 156-160 PR:000006854 denotes E2f3
T37799 185-189 PR:000006854 denotes E2f3
T37800 210-215 PR:000028775 denotes E2f3a
T37801 219-223 NCBITaxon:10088 denotes mice
T37802 237-241 PR:000006854 denotes E2f3
T37803 242-246 SO:0000147 denotes exon
T37804 262-268 SO:0000188 denotes intron
T37805 310-317 SO:0000112 denotes primers
T37806 336-341 PR:000028775 denotes E2f3a
T37807 345-350 NCBITaxon:10088 denotes mouse
T37808 398-403 PR:000028775 denotes E2f3a
T37809 426-432 UBERON:0000966 denotes retina
T37810 451-458 SO:0000112 denotes primers
T37811 571-577 UBERON:0000966 denotes retina
T37812 578-587 GO:0010467 denotes expresses
T37813 593-598 PR:000028775 denotes E2f3a
T37814 628-633 PR:000028775 denotes E2f3a
T37815 637-643 UBERON:0000966 denotes retina
T37816 650-655 PR:000028775 denotes E2f3a
T37817 671-680 GO:0010467 denotes expresses
T37818 693-697 PR:000006854 denotes E2f3
T37819 701-707 UBERON:0000966 denotes retina
T37820 726-731 PR:000028775 denotes E2f3a
T37821 761-770 GO:0010467 denotes expresses
T37822 796-800 SO:0000147 denotes exon
T37823 841-846 SO:0000704 denotes genes
T37824 853-860 UBERON:0000966 denotes retinas
T37825 940-947 NCBITaxon:33208 denotes animals
T37826 1103-1105 PR:000013773 denotes Rb
T37827 1117-1122 PR:000028775 denotes E2f3a
T37828 1144-1151 UBERON:0000966 denotes retinal
T37829 1214-1220 GO:0005634 denotes nuclei
T37830 1222-1226 CHEBI:51231 denotes DAPI
T37831 1235-1242 GO:0000279 denotes M-phase
T37832 1276-1283 PR:000014968 denotes Slc18a3
T37833 1291-1296 PR:000028775 denotes E2f3a