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the three Calb2+ tracks in the IPL, the two outer tracks are from SACs, named after their extensive dendritic-tree-like morphology [37]. SACs are cholinergic, represent ~5.2% of amacrine neurons [38], and are critical for both direction selectivity [34,35] and spontaneous rhythmic activity that occurs during normal retinal development [36]. SACs in the INL synapse in the OFF layer of the IPL that responds to decreasing light, while displaced SACs in the GCL have processes that synapse in the nearby ON layer of the IPL that responds to increasing light (reviewed in [39]). Mature SAC processes stain specifically for Slc18a3 (vesicular acetyl choline transporter, VAChT) [37], and, significantly, this marker was absent in the peripheral Rb KO or Rb/E2f1 DKO P18 retina (Figures 3A and S7B). Chat, expressed from the same locus, is also SAC specific, but marks both cell bodies and processes of mature SACs [37]. Chat was seen in fewer cells in the mature Rb KO retina, and was present in the soma but absent from processes (Figure 3B). We obtained similar results for Sv2c, a synaptic vesicle protein found in SACs [40]; Kcnc1b and Kcnc2, potassium channels expressed on SAC soma and dendrites as well as a very small number of ganglion cells [41]; gamma-aminobutyric acid (GABA), an inhibitory neurotransmitter present in about half of amacrine cells including SACs, as well as horizontal and some bipolar neurons [37]; and Calb1 (calbindin), which is expressed in many amacrine cells and labels SAC process faintly (Figure S7A and S7B; Table S1; and data not shown). Finally, we also examined the effect of Rb deletion on SAC differentiation using a Chx10-Cre transgene that is expressed in a mosaic pattern across the retina, generating patches of Cre-expressing cells [42]. Consistent with the mosaic deletion pattern, we observed markedly reduced Chat/Slc18a3 staining in the IPL of Chx10-Cre;RbloxP/loxP retina compared to WT (Figure S7C). Together, these results suggest a role for Rb in SAC differentiation."}

    craft-ca-core-ex-dev

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the three Calb2+ tracks in the IPL, the two outer tracks are from SACs, named after their extensive dendritic-tree-like morphology [37]. SACs are cholinergic, represent ~5.2% of amacrine neurons [38], and are critical for both direction selectivity [34,35] and spontaneous rhythmic activity that occurs during normal retinal development [36]. SACs in the INL synapse in the OFF layer of the IPL that responds to decreasing light, while displaced SACs in the GCL have processes that synapse in the nearby ON layer of the IPL that responds to increasing light (reviewed in [39]). Mature SAC processes stain specifically for Slc18a3 (vesicular acetyl choline transporter, VAChT) [37], and, significantly, this marker was absent in the peripheral Rb KO or Rb/E2f1 DKO P18 retina (Figures 3A and S7B). Chat, expressed from the same locus, is also SAC specific, but marks both cell bodies and processes of mature SACs [37]. Chat was seen in fewer cells in the mature Rb KO retina, and was present in the soma but absent from processes (Figure 3B). We obtained similar results for Sv2c, a synaptic vesicle protein found in SACs [40]; Kcnc1b and Kcnc2, potassium channels expressed on SAC soma and dendrites as well as a very small number of ganglion cells [41]; gamma-aminobutyric acid (GABA), an inhibitory neurotransmitter present in about half of amacrine cells including SACs, as well as horizontal and some bipolar neurons [37]; and Calb1 (calbindin), which is expressed in many amacrine cells and labels SAC process faintly (Figure S7A and S7B; Table S1; and data not shown). Finally, we also examined the effect of Rb deletion on SAC differentiation using a Chx10-Cre transgene that is expressed in a mosaic pattern across the retina, generating patches of Cre-expressing cells [42]. Consistent with the mosaic deletion pattern, we observed markedly reduced Chat/Slc18a3 staining in the IPL of Chx10-Cre;RbloxP/loxP retina compared to WT (Figure S7C). Together, these results suggest a role for Rb in SAC differentiation."}

    craft-ca-core-dev

    {"project":"craft-ca-core-dev","denotations":[{"id":"T13440","span":{"begin":3,"end":4},"obj":"UBERON:0000966"},{"id":"T13441","span":{"begin":7,"end":8},"obj":"UBERON:0000966"},{"id":"T13442","span":{"begin":16,"end":18},"obj":"PR:000004968"},{"id":"T13443","span":{"begin":103,"end":117},"obj":"GO:0097447"},{"id":"T13444","span":{"begin":149,"end":160},"obj":"CHEBI:15355"},{"id":"T13445","span":{"begin":181,"end":197},"obj":"CL:0000561"},{"id":"T13446","span":{"begin":320,"end":327},"obj":"UBERON:0000966"},{"id":"T13447","span":{"begin":320,"end":339},"obj":"GO:0060041"},{"id":"T13448","span":{"begin":358,"end":361},"obj":"UBERON:0001791"},{"id":"T13449","span":{"begin":362,"end":369},"obj":"GO:0045202"},{"id":"T13450","span":{"begin":461,"end":464},"obj":"UBERON:0001792"},{"id":"T13451","span":{"begin":470,"end":479},"obj":"GO:0042995"},{"id":"T13452","span":{"begin":592,"end":601},"obj":"GO:0042995"},{"id":"T13453","span":{"begin":625,"end":632},"obj":"PR:000014968"},{"id":"T13454","span":{"begin":634,"end":643},"obj":"GO:0031982"},{"id":"T13455","span":{"begin":634,"end":670},"obj":"PR:000014968"},{"id":"T13456","span":{"begin":644,"end":658},"obj":"CHEBI:15355"},{"id":"T13457","span":{"begin":672,"end":677},"obj":"PR:000014968"},{"id":"T13458","span":{"begin":735,"end":745},"obj":"_FRAGMENT"},{"id":"T13459","span":{"begin":771,"end":777},"obj":"UBERON:0013682"},{"id":"T13460","span":{"begin":746,"end":748},"obj":"PR:000013773"},{"id":"T13461","span":{"begin":755,"end":757},"obj":"PR:000013773"},{"id":"T13462","span":{"begin":758,"end":762},"obj":"PR:000006852"},{"id":"T13463","span":{"begin":806,"end":815},"obj":"GO:0010467"},{"id":"T13464","span":{"begin":874,"end":885},"obj":"GO:0044297"},{"id":"T13465","span":{"begin":890,"end":899},"obj":"GO:0042995"},{"id":"T13466","span":{"begin":964,"end":966},"obj":"PR:000013773"},{"id":"T13467","span":{"begin":970,"end":976},"obj":"UBERON:0000966"},{"id":"T13468","span":{"begin":1001,"end":1005},"obj":"GO:0044297"},{"id":"T13469","span":{"begin":1022,"end":1031},"obj":"GO:0042995"},{"id":"T13470","span":{"begin":1077,"end":1081},"obj":"PR:000015851"},{"id":"T13471","span":{"begin":1085,"end":1101},"obj":"GO:0008021"},{"id":"T13472","span":{"begin":1130,"end":1136},"obj":"PR:000000940"},{"id":"T13473","span":{"begin":1141,"end":1146},"obj":"PR:000000782"},{"id":"T13474","span":{"begin":1167,"end":1176},"obj":"GO:0010467"},{"id":"T13475","span":{"begin":1184,"end":1188},"obj":"GO:0044297"},{"id":"T13476","span":{"begin":1193,"end":1202},"obj":"GO:0030425"},{"id":"T13477","span":{"begin":1237,"end":1245},"obj":"UBERON:0000045"},{"id":"T13478","span":{"begin":1237,"end":1251},"obj":"CL:0000740"},{"id":"T13479","span":{"begin":1258,"end":1281},"obj":"CHEBI:16865"},{"id":"T13480","span":{"begin":1283,"end":1287},"obj":"CHEBI:16865"},{"id":"T13481","span":{"begin":1304,"end":1320},"obj":"CHEBI:25512"},{"id":"T13482","span":{"begin":1346,"end":1360},"obj":"CL:0000561"},{"id":"T13483","span":{"begin":1388,"end":1398},"obj":"_FRAGMENT"},{"id":"T13484","span":{"begin":1416,"end":1423},"obj":"CL:0000745"},{"id":"T13485","span":{"begin":1408,"end":1423},"obj":"CL:0000103"},{"id":"T13486","span":{"begin":1434,"end":1439},"obj":"PR:000004967"},{"id":"T13487","span":{"begin":1441,"end":1450},"obj":"PR:000004967"},{"id":"T13488","span":{"begin":1462,"end":1471},"obj":"GO:0010467"},{"id":"T13489","span":{"begin":1480,"end":1494},"obj":"CL:0000561"},{"id":"T13490","span":{"begin":1510,"end":1517},"obj":"GO:0042995"},{"id":"T13491","span":{"begin":1618,"end":1620},"obj":"PR:000013773"},{"id":"T13492","span":{"begin":1661,"end":1666},"obj":"PR:000017355"},{"id":"T13493","span":{"begin":1671,"end":1680},"obj":"SO:0000902"},{"id":"T13494","span":{"begin":1689,"end":1698},"obj":"GO:0010467"},{"id":"T13495","span":{"begin":1730,"end":1736},"obj":"UBERON:0000966"},{"id":"T13496","span":{"begin":1764,"end":1774},"obj":"GO:0010467"},{"id":"T13497","span":{"begin":1866,"end":1873},"obj":"PR:000014968"},{"id":"T13498","span":{"begin":1897,"end":1902},"obj":"PR:000017355"},{"id":"T13499","span":{"begin":1907,"end":1909},"obj":"PR:000013773"},{"id":"T13500","span":{"begin":1909,"end":1913},"obj":"SO:0000346"},{"id":"T13501","span":{"begin":1914,"end":1918},"obj":"SO:0000346"},{"id":"T13502","span":{"begin":1919,"end":1925},"obj":"UBERON:0000966"},{"id":"T13503","span":{"begin":1998,"end":2000},"obj":"PR:000013773"}],"relations":[{"id":"R3520","pred":"_lexicallyChainedTo","subj":"T13459","obj":"T13458"},{"id":"R3521","pred":"_lexicallyChainedTo","subj":"T13484","obj":"T13483"}],"text":"Of the three Calb2+ tracks in the IPL, the two outer tracks are from SACs, named after their extensive dendritic-tree-like morphology [37]. SACs are cholinergic, represent ~5.2% of amacrine neurons [38], and are critical for both direction selectivity [34,35] and spontaneous rhythmic activity that occurs during normal retinal development [36]. SACs in the INL synapse in the OFF layer of the IPL that responds to decreasing light, while displaced SACs in the GCL have processes that synapse in the nearby ON layer of the IPL that responds to increasing light (reviewed in [39]). Mature SAC processes stain specifically for Slc18a3 (vesicular acetyl choline transporter, VAChT) [37], and, significantly, this marker was absent in the peripheral Rb KO or Rb/E2f1 DKO P18 retina (Figures 3A and S7B). Chat, expressed from the same locus, is also SAC specific, but marks both cell bodies and processes of mature SACs [37]. Chat was seen in fewer cells in the mature Rb KO retina, and was present in the soma but absent from processes (Figure 3B). We obtained similar results for Sv2c, a synaptic vesicle protein found in SACs [40]; Kcnc1b and Kcnc2, potassium channels expressed on SAC soma and dendrites as well as a very small number of ganglion cells [41]; gamma-aminobutyric acid (GABA), an inhibitory neurotransmitter present in about half of amacrine cells including SACs, as well as horizontal and some bipolar neurons [37]; and Calb1 (calbindin), which is expressed in many amacrine cells and labels SAC process faintly (Figure S7A and S7B; Table S1; and data not shown). Finally, we also examined the effect of Rb deletion on SAC differentiation using a Chx10-Cre transgene that is expressed in a mosaic pattern across the retina, generating patches of Cre-expressing cells [42]. Consistent with the mosaic deletion pattern, we observed markedly reduced Chat/Slc18a3 staining in the IPL of Chx10-Cre;RbloxP/loxP retina compared to WT (Figure S7C). Together, these results suggest a role for Rb in SAC differentiation."}

    2_test

    {"project":"2_test","denotations":[{"id":"17608565-10888735-84868982","span":{"begin":135,"end":137},"obj":"10888735"},{"id":"17608565-9786999-84868983","span":{"begin":199,"end":201},"obj":"9786999"},{"id":"17608565-12192402-84868984","span":{"begin":253,"end":255},"obj":"12192402"},{"id":"17608565-12459782-84868985","span":{"begin":256,"end":258},"obj":"12459782"},{"id":"17608565-16462736-84868986","span":{"begin":341,"end":343},"obj":"16462736"},{"id":"17608565-14766316-84868987","span":{"begin":575,"end":577},"obj":"14766316"},{"id":"17608565-10888735-84868988","span":{"begin":680,"end":682},"obj":"10888735"},{"id":"17608565-10888735-84868989","span":{"begin":916,"end":918},"obj":"10888735"},{"id":"17608565-12687700-84868990","span":{"begin":1125,"end":1127},"obj":"12687700"},{"id":"17608565-15317859-84868991","span":{"begin":1253,"end":1255},"obj":"15317859"},{"id":"17608565-10888735-84868992","span":{"begin":1425,"end":1427},"obj":"10888735"},{"id":"17608565-15223342-84868993","span":{"begin":1782,"end":1784},"obj":"15223342"},{"id":"T71260","span":{"begin":135,"end":137},"obj":"10888735"},{"id":"T74047","span":{"begin":199,"end":201},"obj":"9786999"},{"id":"T32680","span":{"begin":253,"end":255},"obj":"12192402"},{"id":"T30189","span":{"begin":256,"end":258},"obj":"12459782"},{"id":"T85446","span":{"begin":341,"end":343},"obj":"16462736"},{"id":"T71830","span":{"begin":575,"end":577},"obj":"14766316"},{"id":"T52756","span":{"begin":680,"end":682},"obj":"10888735"},{"id":"T53889","span":{"begin":916,"end":918},"obj":"10888735"},{"id":"T81621","span":{"begin":1125,"end":1127},"obj":"12687700"},{"id":"T70987","span":{"begin":1253,"end":1255},"obj":"15317859"},{"id":"T5108","span":{"begin":1425,"end":1427},"obj":"10888735"},{"id":"T51951","span":{"begin":1782,"end":1784},"obj":"15223342"}],"text":"Of the three Calb2+ tracks in the IPL, the two outer tracks are from SACs, named after their extensive dendritic-tree-like morphology [37]. SACs are cholinergic, represent ~5.2% of amacrine neurons [38], and are critical for both direction selectivity [34,35] and spontaneous rhythmic activity that occurs during normal retinal development [36]. SACs in the INL synapse in the OFF layer of the IPL that responds to decreasing light, while displaced SACs in the GCL have processes that synapse in the nearby ON layer of the IPL that responds to increasing light (reviewed in [39]). Mature SAC processes stain specifically for Slc18a3 (vesicular acetyl choline transporter, VAChT) [37], and, significantly, this marker was absent in the peripheral Rb KO or Rb/E2f1 DKO P18 retina (Figures 3A and S7B). Chat, expressed from the same locus, is also SAC specific, but marks both cell bodies and processes of mature SACs [37]. Chat was seen in fewer cells in the mature Rb KO retina, and was present in the soma but absent from processes (Figure 3B). We obtained similar results for Sv2c, a synaptic vesicle protein found in SACs [40]; Kcnc1b and Kcnc2, potassium channels expressed on SAC soma and dendrites as well as a very small number of ganglion cells [41]; gamma-aminobutyric acid (GABA), an inhibitory neurotransmitter present in about half of amacrine cells including SACs, as well as horizontal and some bipolar neurons [37]; and Calb1 (calbindin), which is expressed in many amacrine cells and labels SAC process faintly (Figure S7A and S7B; Table S1; and data not shown). Finally, we also examined the effect of Rb deletion on SAC differentiation using a Chx10-Cre transgene that is expressed in a mosaic pattern across the retina, generating patches of Cre-expressing cells [42]. Consistent with the mosaic deletion pattern, we observed markedly reduced Chat/Slc18a3 staining in the IPL of Chx10-Cre;RbloxP/loxP retina compared to WT (Figure S7C). Together, these results suggest a role for Rb in SAC differentiation."}