PMC:1892782 / 22930-23714 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1892782","sourcedb":"PMC","sourceid":"1892782","source_url":"https://www.ncbi.nlm.nih.gov/pmc/1892782","text":"To evaluate the performance of RNAstrand on alignments which have not been identified as structured RNA by RNAz, we constructed a second test set which only consists of alignments not classified as structured RNA by RNAz in both reading directions. This resulted in 207 families meeting the criteria described in the first paragraph of this section. The corresponding distributions are shown in the supplementary material (see Additional file 1). For those alignments a dramatic decrease of structure stability and conservation is observed which leads to smaller descriptor values (see Additional file 1). Hence, the classification performance is worse compared to RNAz-positive alignments (Table 1). However, for the majority of alignments the correct reading direction was inferred.","tracks":[]}