PMC:1892782 / 1777-2259 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1892782","sourcedb":"PMC","sourceid":"1892782","source_url":"https://www.ncbi.nlm.nih.gov/pmc/1892782","text":"The RNAstrand tool is designed specifically to predict the reading direction of a multiple sequence alignment under the assumption that the alignment contains an evolutionary conserved RNA secondary structure. Our task at hand is a conceptually simple two class prediction problem for which we employ a support vector machine (SVM) [8]. The basic idea is to devise descriptors that utilize both the small asymmetry in the energy rules [9] and the asymmetric effect of GU base pairs.","tracks":[{"project":"2_test","denotations":[{"id":"17540014-10329189-1690041","span":{"begin":436,"end":437},"obj":"10329189"}],"attributes":[{"subj":"17540014-10329189-1690041","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"2_test","color":"#cf93ec","default":true}]}]}}