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PMC:1892049 / 382-576 JSONTXT

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craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T833 21-29 SO_EXT:biological_sequence denotes sequence
T834 97-105 SO:0001817 denotes in-frame
T835 109-111 SO_EXT:0000028 denotes bp
T836 112-120 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T837 124-129 PR_EXT:000009158 denotes Itpr1
T838 131-136 PR_EXT:000009158 denotes Itpr1
T839 146-154 SO_EXT:sequence_coding_function denotes encoding
T840 155-182 CHEBI_EXT:1D_myo_inositol_1_4_5_trisphosphate denotes inositol 1,4,5-triphosphate
T841 155-191 GO_EXT:0005220 denotes inositol 1,4,5-triphosphate receptor
T842 155-193 PR_EXT:000009158 denotes inositol 1,4,5-triphosphate receptor 1

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T796 97-105 SO:0001817 denotes in-frame
T797 109-111 SO:0000028 denotes bp
T798 124-129 PR:000009158 denotes Itpr1
T799 131-136 PR:000009158 denotes Itpr1
T800 155-193 PR:000009158 denotes inositol 1,4,5-triphosphate receptor 1

craft-sa-dev

Id Subject Object Predicate Lexical cue
T933 0-194 sentence denotes Through linkage and sequence analysis we show here that this disorder is caused by a homozygous in-frame 18-bp deletion in Itpr1 (Itpr1Δ18/Δ18), encoding inositol 1,4,5-triphosphate receptor 1.
T934 1-8 IN denotes Through
T935 42-46 VBP denotes show
T936 9-16 NN denotes linkage
T937 30-38 NN denotes analysis
T938 17-20 CC denotes and
T939 21-29 NN denotes sequence
T940 39-41 PRP denotes we
T941 47-51 RB denotes here
T942 52-56 IN denotes that
T943 74-80 VBN denotes caused
T944 57-61 DT denotes this
T945 62-70 NN denotes disorder
T946 71-73 VBZ denotes is
T947 81-83 IN denotes by
T948 84-85 DT denotes a
T949 112-120 NN denotes deletion
T950 86-96 JJ denotes homozygous
T951 97-99 IN denotes in
T952 99-100 HYPH denotes -
T953 100-105 NN denotes frame
T954 106-108 CD denotes 18
T955 109-111 NN denotes bp
T956 108-109 HYPH denotes -
T957 121-123 IN denotes in
T958 124-129 NN denotes Itpr1
T959 130-131 -LRB- denotes (
T960 140-143 NN denotes Δ18
T961 131-136 NN denotes Itpr1
T962 136-139 NN denotes Δ18
T963 139-140 HYPH denotes /
T964 143-144 -RRB- denotes )
T965 144-146 , denotes ,
T966 146-154 VBG denotes encoding
T967 155-163 NN denotes inositol
T968 183-191 NN denotes receptor
T969 164-165 CD denotes 1
T970 168-169 CD denotes 5
T971 165-166 , denotes ,
T972 166-167 CD denotes 4
T973 167-168 , denotes ,
T974 170-182 NN denotes triphosphate
T975 169-170 HYPH denotes -
T976 192-193 CD denotes 1
T977 193-194 . denotes .
R66 T944 T945 det this,disorder
R57 T934 T935 prep Through,show
R58 T936 T937 nmod linkage,analysis
R60 T938 T936 cc and,linkage
R61 T939 T936 conj sequence,linkage
R62 T940 T935 nsubj we,show
R63 T941 T935 advmod here,show
R64 T942 T943 mark that,caused
R65 T943 T935 ccomp caused,show
R67 T945 T943 nsubjpass disorder,caused
R68 T946 T943 auxpass is,caused
R69 T947 T943 agent by,caused
R70 T948 T949 det a,deletion
R71 T949 T947 pobj deletion,by
R72 T950 T949 amod homozygous,deletion
R73 T951 T949 nmod in,deletion
R74 T952 T951 punct -,in
R75 T953 T951 pobj frame,in
R76 T954 T955 nummod 18,bp
R77 T955 T949 compound bp,deletion
R78 T956 T955 punct -,bp
R79 T957 T949 prep in,deletion
R80 T958 T957 pobj Itpr1,in
R81 T959 T960 punct (,Δ18
R82 T960 T958 parataxis Δ18,Itpr1
R83 T961 T960 compound Itpr1,Δ18
R84 T962 T960 compound Δ18,Δ18
R85 T963 T960 punct /,Δ18
R86 T964 T960 punct ),Δ18
R87 T965 T949 punct ", ",deletion
R88 T966 T949 acl encoding,deletion
R89 T967 T968 nmod inositol,receptor
R90 T968 T966 dobj receptor,encoding
R91 T969 T970 nummod 1,5
R93 T971 T970 punct ",",5
R94 T972 T970 nummod 4,5
R95 T973 T970 punct ",",5
R96 T974 T968 compound triphosphate,receptor
R97 T975 T974 punct -,triphosphate
R98 T976 T968 nummod 1,receptor
R99 T977 T935 punct .,show
R59 T937 T934 pobj analysis,Through
R92 T970 T974 nummod 5,triphosphate

Biotea

Id Subject Object Predicate Lexical cue
T599 62-70 http://purl.bioontology.org/ontology/SNOMEDCT/64572001 denotes disorder
T604 62-70 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C2991 denotes disorder
T636 9-16 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C94542 denotes linkage
T637 21-38 http://purl.bioontology.org/ontology/MESH/D017421 denotes sequence analysis
T638 21-38 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C17565 denotes sequence analysis
T639 21-29 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C43465 denotes sequence
T640 21-29 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C89252 denotes sequence
T641 21-29 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13299 denotes sequence
T642 21-29 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25673 denotes sequence
T643 21-29 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45374 denotes sequence
T644 21-29 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T646 30-38 http://purl.bioontology.org/ontology/MESH/Q000032 denotes analysis
T647 30-38 http://purl.bioontology.org/ontology/SNOMEDCT/272389005 denotes analysis
T648 30-38 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25391 denotes analysis
T649 86-96 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45826 denotes homozygous
T650 100-105 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C49963 denotes frame
T652 100-105 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C63552 denotes frame
T654 100-105 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C80261 denotes frame
T656 100-105 http://purl.bioontology.org/ontology/SNOMEDCT/257297007 denotes frame
T658 124-129 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C51556 denotes Itpr1
T669 124-129 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C24527 denotes Itpr1
T678 124-129 http://purl.obolibrary.org/obo/PR_000009158 denotes Itpr1
T686 146-154 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C80216 denotes encoding
T687 155-182 http://purl.bioontology.org/ontology/MESH/D015544 denotes inositol 1,4,5-triphosphate
T688 155-182 http://purl.bioontology.org/ontology/NDFRT/N0000168540 denotes inositol 1,4,5-triphosphate
T689 155-163 http://purl.bioontology.org/ontology/NDFRT/N0000146062 denotes inositol
T690 155-163 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C28163 denotes inositol
T691 155-163 http://purl.bioontology.org/ontology/NDDF/002057 denotes inositol
T692 155-163 http://purl.bioontology.org/ontology/NDFRT/N0000007204 denotes inositol
T693 155-163 http://purl.bioontology.org/ontology/MESH/D007294 denotes inositol
T694 155-163 http://purl.bioontology.org/ontology/SNOMEDCT/72164009 denotes inositol
T695 183-191 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C18106 denotes receptor
T696 183-191 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T697 183-191 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T698 183-191 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T699 183-191 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T700 183-191 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T701 183-191 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T702 183-191 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T703 183-191 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T704 183-191 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T705 183-191 http://purl.bioontology.org/ontology/SNOMEDCT/116647005 denotes receptor
T490 112-120 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C61330 denotes deletion
T494 112-120 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C19296 denotes deletion
T498 112-120 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45583 denotes deletion
T502 112-120 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45577 denotes deletion
T506 112-120 http://purl.bioontology.org/ontology/SNOMEDCT/737543005 denotes deletion