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PMC:1892049 / 327-622 JSONTXT

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craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T831 16-22 NCBITaxon:9606 denotes humans
T832 28-36 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T833 76-84 SO_EXT:biological_sequence denotes sequence
T834 152-160 SO:0001817 denotes in-frame
T835 164-166 SO_EXT:0000028 denotes bp
T836 167-175 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T837 179-184 PR_EXT:000009158 denotes Itpr1
T838 186-191 PR_EXT:000009158 denotes Itpr1
T839 201-209 SO_EXT:sequence_coding_function denotes encoding
T840 210-237 CHEBI_EXT:1D_myo_inositol_1_4_5_trisphosphate denotes inositol 1,4,5-triphosphate
T841 210-246 GO_EXT:0005220 denotes inositol 1,4,5-triphosphate receptor
T842 210-248 PR_EXT:000009158 denotes inositol 1,4,5-triphosphate receptor 1
T843 284-289 PR_EXT:000009158 denotes Itpr1

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T795 16-22 NCBITaxon:9606 denotes humans
T796 152-160 SO:0001817 denotes in-frame
T797 164-166 SO:0000028 denotes bp
T798 179-184 PR:000009158 denotes Itpr1
T799 186-191 PR:000009158 denotes Itpr1
T800 210-248 PR:000009158 denotes inositol 1,4,5-triphosphate receptor 1
T801 284-289 PR:000009158 denotes Itpr1

craft-sa-dev

Id Subject Object Predicate Lexical cue
T922 5-12 NN denotes disease
T924 13-15 IN denotes in
T925 16-22 NNS denotes humans
T926 23-27 IN denotes with
T927 28-36 NN denotes mutation
T928 37-39 IN denotes at
T929 40-43 DT denotes the
T930 49-54 NN denotes locus
T931 44-48 JJ denotes same
T932 54-55 . denotes .
T933 55-249 sentence denotes Through linkage and sequence analysis we show here that this disorder is caused by a homozygous in-frame 18-bp deletion in Itpr1 (Itpr1Δ18/Δ18), encoding inositol 1,4,5-triphosphate receptor 1.
T934 56-63 IN denotes Through
T935 97-101 VBP denotes show
T936 64-71 NN denotes linkage
T937 85-93 NN denotes analysis
T938 72-75 CC denotes and
T939 76-84 NN denotes sequence
T940 94-96 PRP denotes we
T941 102-106 RB denotes here
T942 107-111 IN denotes that
T943 129-135 VBN denotes caused
T944 112-116 DT denotes this
T945 117-125 NN denotes disorder
T946 126-128 VBZ denotes is
T947 136-138 IN denotes by
T948 139-140 DT denotes a
T949 167-175 NN denotes deletion
T950 141-151 JJ denotes homozygous
T951 152-154 IN denotes in
T952 154-155 HYPH denotes -
T953 155-160 NN denotes frame
T954 161-163 CD denotes 18
T955 164-166 NN denotes bp
T956 163-164 HYPH denotes -
T957 176-178 IN denotes in
T958 179-184 NN denotes Itpr1
T959 185-186 -LRB- denotes (
T960 195-198 NN denotes Δ18
T961 186-191 NN denotes Itpr1
T962 191-194 NN denotes Δ18
T963 194-195 HYPH denotes /
T964 198-199 -RRB- denotes )
T965 199-201 , denotes ,
T966 201-209 VBG denotes encoding
T967 210-218 NN denotes inositol
T968 238-246 NN denotes receptor
T969 219-220 CD denotes 1
T970 223-224 CD denotes 5
T971 220-221 , denotes ,
T972 221-222 CD denotes 4
T973 222-223 , denotes ,
T974 225-237 NN denotes triphosphate
T975 224-225 HYPH denotes -
T976 247-248 CD denotes 1
T977 248-249 . denotes .
T979 250-251 DT denotes A
T981 252-262 RB denotes previously
T982 263-271 VBN denotes reported
T983 272-283 JJ denotes spontaneous
T984 284-289 NN denotes Itpr1
R66 T944 T945 det this,disorder
R49 T925 T924 pobj humans,in
R50 T926 T925 prep with,humans
R51 T927 T926 pobj mutation,with
R52 T928 T927 prep at,mutation
R53 T929 T930 det the,locus
R54 T930 T928 pobj locus,at
R55 T931 T930 amod same,locus
R57 T934 T935 prep Through,show
R58 T936 T937 nmod linkage,analysis
R60 T938 T936 cc and,linkage
R61 T939 T936 conj sequence,linkage
R62 T940 T935 nsubj we,show
R63 T941 T935 advmod here,show
R64 T942 T943 mark that,caused
R65 T943 T935 ccomp caused,show
R67 T945 T943 nsubjpass disorder,caused
R68 T946 T943 auxpass is,caused
R69 T947 T943 agent by,caused
R70 T948 T949 det a,deletion
R71 T949 T947 pobj deletion,by
R72 T950 T949 amod homozygous,deletion
R73 T951 T949 nmod in,deletion
R74 T952 T951 punct -,in
R75 T953 T951 pobj frame,in
R76 T954 T955 nummod 18,bp
R77 T955 T949 compound bp,deletion
R78 T956 T955 punct -,bp
R79 T957 T949 prep in,deletion
R80 T958 T957 pobj Itpr1,in
R81 T959 T960 punct (,Δ18
R82 T960 T958 parataxis Δ18,Itpr1
R83 T961 T960 compound Itpr1,Δ18
R84 T962 T960 compound Δ18,Δ18
R85 T963 T960 punct /,Δ18
R86 T964 T960 punct ),Δ18
R87 T965 T949 punct ", ",deletion
R88 T966 T949 acl encoding,deletion
R89 T967 T968 nmod inositol,receptor
R90 T968 T966 dobj receptor,encoding
R91 T969 T970 nummod 1,5
R93 T971 T970 punct ",",5
R94 T972 T970 nummod 4,5
R95 T973 T970 punct ",",5
R96 T974 T968 compound triphosphate,receptor
R97 T975 T974 punct -,triphosphate
R98 T976 T968 nummod 1,receptor
R99 T977 T935 punct .,show
R102 T981 T982 advmod previously,reported
R59 T937 T934 pobj analysis,Through
R92 T970 T974 nummod 5,triphosphate

Biotea

Id Subject Object Predicate Lexical cue
T573 16-22 http://purl.bioontology.org/ontology/MESH/D006801 denotes humans
T598 5-12 http://purl.bioontology.org/ontology/SNOMEDCT/64572001 denotes disease
T599 117-125 http://purl.bioontology.org/ontology/SNOMEDCT/64572001 denotes disorder
T603 5-12 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C2991 denotes disease
T604 117-125 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C2991 denotes disorder
T622 5-12 http://purl.obolibrary.org/obo/OGMS_0000031 denotes disease
T623 5-12 http://purl.bioontology.org/ontology/NDFRT/N0000000981 denotes disease
T624 5-12 http://purl.bioontology.org/ontology/MESH/D004194 denotes disease
T625 28-36 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C16885 denotes mutation
T628 28-36 http://purl.bioontology.org/ontology/MESH/D009154 denotes mutation
T632 28-36 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45576 denotes mutation
T635 49-54 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45822 denotes locus
T636 64-71 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C94542 denotes linkage
T637 76-93 http://purl.bioontology.org/ontology/MESH/D017421 denotes sequence analysis
T638 76-93 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C17565 denotes sequence analysis
T639 76-84 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C43465 denotes sequence
T640 76-84 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C89252 denotes sequence
T641 76-84 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13299 denotes sequence
T642 76-84 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25673 denotes sequence
T643 76-84 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45374 denotes sequence
T644 76-84 http://purl.obolibrary.org/obo/SO_0000001 denotes sequence
T646 85-93 http://purl.bioontology.org/ontology/MESH/Q000032 denotes analysis
T647 85-93 http://purl.bioontology.org/ontology/SNOMEDCT/272389005 denotes analysis
T648 85-93 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25391 denotes analysis
T649 141-151 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45826 denotes homozygous
T650 155-160 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C49963 denotes frame
T652 155-160 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C63552 denotes frame
T654 155-160 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C80261 denotes frame
T656 155-160 http://purl.bioontology.org/ontology/SNOMEDCT/257297007 denotes frame
T658 179-184 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C51556 denotes Itpr1
T659 284-289 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C51556 denotes Itpr1
T669 179-184 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C24527 denotes Itpr1
T670 284-289 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C24527 denotes Itpr1
T678 179-184 http://purl.obolibrary.org/obo/PR_000009158 denotes Itpr1
T679 284-289 http://purl.obolibrary.org/obo/PR_000009158 denotes Itpr1
T686 201-209 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C80216 denotes encoding
T687 210-237 http://purl.bioontology.org/ontology/MESH/D015544 denotes inositol 1,4,5-triphosphate
T688 210-237 http://purl.bioontology.org/ontology/NDFRT/N0000168540 denotes inositol 1,4,5-triphosphate
T689 210-218 http://purl.bioontology.org/ontology/NDFRT/N0000146062 denotes inositol
T690 210-218 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C28163 denotes inositol
T691 210-218 http://purl.bioontology.org/ontology/NDDF/002057 denotes inositol
T692 210-218 http://purl.bioontology.org/ontology/NDFRT/N0000007204 denotes inositol
T693 210-218 http://purl.bioontology.org/ontology/MESH/D007294 denotes inositol
T694 210-218 http://purl.bioontology.org/ontology/SNOMEDCT/72164009 denotes inositol
T695 238-246 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C18106 denotes receptor
T696 238-246 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T697 238-246 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T698 238-246 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T699 238-246 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T700 238-246 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T701 238-246 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T702 238-246 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T703 238-246 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T704 238-246 http://purl.bioontology.org/ontology/STY/T192 denotes receptor
T705 238-246 http://purl.bioontology.org/ontology/SNOMEDCT/116647005 denotes receptor
T706 263-271 http://purl.bioontology.org/ontology/SNOMEDCT/733985002 denotes reported
T707 263-271 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25375 denotes reported
T708 272-283 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C48307 denotes spontaneous
T709 272-283 http://purl.bioontology.org/ontology/SNOMEDCT/5054005 denotes spontaneous
T490 167-175 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C61330 denotes deletion
T494 167-175 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C19296 denotes deletion
T498 167-175 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45583 denotes deletion
T502 167-175 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45577 denotes deletion
T506 167-175 http://purl.bioontology.org/ontology/SNOMEDCT/737543005 denotes deletion