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PMC:1892049 / 1001-1221 JSONTXT

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craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T860 44-49 PR_EXT:000009158 denotes Itpr1
T861 50-56 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T862 57-61 NCBITaxon:10088 denotes mice
T863 128-136 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T864 140-145 PR_EXT:000009158 denotes ITPR1
T865 204-212 SO_EXT:sequence_deletion_entity_or_process denotes deletion

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T814 44-49 PR:000009158 denotes Itpr1
T815 57-61 NCBITaxon:10088 denotes mice
T816 140-145 PR:000009158 denotes ITPR1

craft-sa-dev

Id Subject Object Predicate Lexical cue
T1055 1-2 . denotes .
T1056 2-172 sentence denotes Because ataxia is a prominent feature in Itpr1 mutant mice, we performed a series of experiments to test the hypothesis that mutation at ITPR1 may be the cause of SCA15.
T1057 3-10 IN denotes Because
T1058 18-20 VBZ denotes is
T1059 11-17 NN denotes ataxia
T1060 66-75 VBD denotes performed
T1061 21-22 DT denotes a
T1062 33-40 NN denotes feature
T1063 23-32 JJ denotes prominent
T1064 41-43 IN denotes in
T1065 44-49 NN denotes Itpr1
T1066 57-61 NNS denotes mice
T1067 50-56 NN denotes mutant
T1068 61-63 , denotes ,
T1069 63-65 PRP denotes we
T1070 76-77 DT denotes a
T1071 78-84 NN denotes series
T1072 85-87 IN denotes of
T1073 88-99 NNS denotes experiments
T1074 100-102 TO denotes to
T1075 103-107 VB denotes test
T1076 108-111 DT denotes the
T1077 112-122 NN denotes hypothesis
T1078 123-127 IN denotes that
T1079 150-152 VB denotes be
T1080 128-136 NN denotes mutation
T1081 137-139 IN denotes at
T1082 140-145 NN denotes ITPR1
T1083 146-149 MD denotes may
T1084 153-156 DT denotes the
T1085 157-162 NN denotes cause
T1086 163-165 IN denotes of
T1087 166-171 NN denotes SCA15
T1088 171-172 . denotes .
T1090 173-175 PRP denotes We
T1091 176-180 VBP denotes show
T1092 181-185 RB denotes here
T1093 186-190 IN denotes that
T1095 191-203 JJ denotes heterozygous
T1096 204-212 NN denotes deletion
T1097 213-215 IN denotes of
T1098 216-219 DT denotes the
R172 T1057 T1058 mark Because,is
R173 T1058 T1060 advcl is,performed
R174 T1059 T1058 nsubj ataxia,is
R175 T1061 T1062 det a,feature
R176 T1062 T1058 attr feature,is
R177 T1063 T1062 amod prominent,feature
R178 T1064 T1062 prep in,feature
R179 T1065 T1066 compound Itpr1,mice
R180 T1066 T1064 pobj mice,in
R181 T1067 T1066 compound mutant,mice
R182 T1068 T1060 punct ", ",performed
R183 T1069 T1060 nsubj we,performed
R184 T1070 T1071 det a,series
R185 T1071 T1060 dobj series,performed
R186 T1072 T1071 prep of,series
R187 T1073 T1072 pobj experiments,of
R188 T1074 T1075 aux to,test
R189 T1075 T1060 advcl test,performed
R190 T1076 T1077 det the,hypothesis
R191 T1077 T1075 dobj hypothesis,test
R192 T1078 T1079 mark that,be
R193 T1079 T1077 acl be,hypothesis
R194 T1080 T1079 nsubj mutation,be
R195 T1081 T1080 prep at,mutation
R196 T1082 T1081 pobj ITPR1,at
R197 T1083 T1079 aux may,be
R198 T1084 T1085 det the,cause
R199 T1085 T1079 attr cause,be
R200 T1086 T1085 prep of,cause
R201 T1087 T1086 pobj SCA15,of
R202 T1088 T1060 punct .,performed
R203 T1090 T1091 nsubj We,show
R204 T1092 T1091 advmod here,show
R207 T1095 T1096 amod heterozygous,deletion
R209 T1097 T1096 prep of,deletion

Biotea

Id Subject Object Predicate Lexical cue
T512 11-17 http://purl.bioontology.org/ontology/OMIM/MTHU036349 denotes ataxia
T516 11-17 http://purl.obolibrary.org/obo/SYMP_0000005 denotes ataxia
T520 11-17 http://purl.bioontology.org/ontology/MEDDRA/10003591 denotes ataxia
T524 11-17 http://purl.bioontology.org/ontology/MEDLINEPLUS/C0004134 denotes ataxia
T528 11-17 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C26702 denotes ataxia
T532 11-17 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C146737 denotes ataxia
T536 11-17 http://purl.bioontology.org/ontology/SNOMEDCT/20262006 denotes ataxia
T540 11-17 http://purl.bioontology.org/ontology/MESH/D001259 denotes ataxia
T544 57-61 http://purl.obolibrary.org/obo/PR_O89094 denotes mice
T548 57-61 http://purl.obolibrary.org/obo/PR_000005054 denotes mice
T552 57-61 http://purl.bioontology.org/ontology/MESH/D051379 denotes mice
T556 57-61 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C14238 denotes mice
T562 166-171 http://purl.bioontology.org/ontology/OMIM/606658 denotes SCA15
T610 78-84 http://purl.bioontology.org/ontology/SNOMEDCT/13039001 denotes series
T612 78-84 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25674 denotes series
T614 78-84 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C69225 denotes series
T627 128-136 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C16885 denotes mutation
T631 128-136 http://purl.bioontology.org/ontology/MESH/D009154 denotes mutation
T634 128-136 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45576 denotes mutation
T664 44-49 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C51556 denotes Itpr1
T665 140-145 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C51556 denotes ITPR1
T666 166-171 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C51556 denotes SCA15
T674 44-49 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C24527 denotes Itpr1
T675 140-145 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C24527 denotes ITPR1
T683 44-49 http://purl.obolibrary.org/obo/PR_000009158 denotes Itpr1
T684 140-145 http://purl.obolibrary.org/obo/PR_000009158 denotes ITPR1
T755 33-40 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C13379 denotes feature
T761 18-22 http://purl.bioontology.org/ontology/SNOMEDCT/116680003 denotes is a
T762 23-32 http://purl.bioontology.org/ontology/SNOMEDCT/4657009 denotes prominent
T763 33-40 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25447 denotes feature
T764 33-40 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C70838 denotes feature
T765 33-40 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C73619 denotes feature
T766 33-40 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C44283 denotes feature
T767 50-56 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25360 denotes mutant
T768 66-75 http://purl.bioontology.org/ontology/SNOMEDCT/398166005 denotes performed
T769 66-75 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C38000 denotes performed
T770 103-107 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C47891 denotes test
T771 103-107 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C25294 denotes test
T772 103-107 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C113077 denotes test
T773 103-107 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C82541 denotes test
T774 103-107 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C48545 denotes test
T775 103-107 http://purl.org/sig/ont/fma/fma0328527 denotes test
T776 112-122 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C28362 denotes hypothesis
T777 112-122 http://purl.obolibrary.org/obo/OBI_0001908 denotes hypothesis
T778 191-203 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45825 denotes heterozygous
T492 204-212 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C61330 denotes deletion
T496 204-212 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C19296 denotes deletion
T500 204-212 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45583 denotes deletion
T504 204-212 http://ncicb.nci.nih.gov/xml/owl/EVS/Thesaurus.owl#C45577 denotes deletion
T508 204-212 http://purl.bioontology.org/ontology/SNOMEDCT/737543005 denotes deletion