PMC:1867812 / 40590-41294 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1867812","sourcedb":"PMC","sourceid":"1867812","source_url":"https://www.ncbi.nlm.nih.gov/pmc/1867812","text":"Once each folding trajectory is summarized into generalized SOAPs, it is fairly straightforward to detect folding events such as the formation of α-helix or β-turn like local structures. This can be done by simply locating the frames that contain the local motif(s) of interest. We can also easily identify native-like conformations, by finding those that contain the generalized SOAP (β.1 α.2). Finally, based on the summarization, one can quickly identify the ordering of folding events in a trajectory. For instance, to check which secondary structure forms more rapidly, α-helix or β-hairpin, one can simply compare the first occurrence of these structures in the summarized trajectory (Figure 9(b)).","tracks":[]}