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PMC:1860061 / 7726-8240 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T4689 328-330 CD denotes 23
T4631 0-8 JJ denotes Detailed
T4632 9-20 NN denotes information
T4633 65-74 VBN denotes described
T4634 21-23 IN denotes on
T4635 24-34 NN denotes genotyping
T4636 35-37 IN denotes of
T4637 38-41 DT denotes the
T4638 49-55 NN denotes screen
T4639 42-48 NN denotes genome
T4640 56-59 VBZ denotes has
T4641 60-64 VBN denotes been
T4642 75-85 RB denotes previously
T4643 86-87 -LRB- denotes [
T4644 87-89 CD denotes 10
T4645 89-90 -RRB- denotes ]
T4646 90-91 . denotes .
T4647 91-260 sentence denotes In short, we genotyped 290 F2 mice using 126 informative microsatellite markers covering the genome with an average inter-marker distance of 11.5 cM for 290 F2 progeny.
T4648 92-94 IN denotes In
T4649 105-114 VBD denotes genotyped
T4650 95-100 JJ denotes short
T4651 100-102 , denotes ,
T4652 102-104 PRP denotes we
T4653 115-118 CD denotes 290
T4654 122-126 NNS denotes mice
T4655 119-121 NN denotes F2
T4656 127-132 VBG denotes using
T4657 133-136 CD denotes 126
T4658 164-171 NNS denotes markers
T4659 137-148 JJ denotes informative
T4660 149-163 NN denotes microsatellite
T4661 172-180 VBG denotes covering
T4662 181-184 DT denotes the
T4663 185-191 NN denotes genome
T4664 192-196 IN denotes with
T4665 197-199 DT denotes an
T4666 221-229 NN denotes distance
T4667 200-207 JJ denotes average
T4668 208-220 JJ denotes inter-marker
T4669 230-232 IN denotes of
T4670 233-237 CD denotes 11.5
T4671 238-240 NN denotes cM
T4672 241-244 IN denotes for
T4673 245-248 CD denotes 290
T4674 252-259 NN denotes progeny
T4675 249-251 NN denotes F2
T4676 259-260 . denotes .
T4677 260-332 sentence denotes All linkage analyses were performed with QTX Map manager software [23].
T4678 261-264 DT denotes All
T4679 273-281 NNS denotes analyses
T4680 265-272 NN denotes linkage
T4681 287-296 VBN denotes performed
T4682 282-286 VBD denotes were
T4683 297-301 IN denotes with
T4684 302-305 NN denotes QTX
T4685 318-326 NN denotes software
T4686 306-309 NN denotes Map
T4687 310-317 NN denotes manager
T4688 327-328 -LRB- denotes [
T4690 330-331 -RRB- denotes ]
T4691 331-332 . denotes .
T4692 332-412 sentence denotes The main clinical phenotype of CIA, arthritis severity, was taken as phenotype.
T4693 333-336 DT denotes The
T4694 351-360 NN denotes phenotype
T4695 337-341 JJ denotes main
T4696 342-350 JJ denotes clinical
T4697 393-398 VBN denotes taken
T4698 361-363 IN denotes of
T4699 364-367 NN denotes CIA
T4700 367-369 , denotes ,
T4701 369-378 NN denotes arthritis
T4702 379-387 NN denotes severity
T4703 387-389 , denotes ,
T4704 389-392 VBD denotes was
T4705 399-401 IN denotes as
T4706 402-411 NN denotes phenotype
T4707 411-412 . denotes .
T4708 412-514 sentence denotes To detect the small-effect QTL, the threshold value of linkage was set as P = 0.05 (Chi-square test).
T4709 413-415 TO denotes To
T4710 416-422 VB denotes detect
T4711 480-483 VBN denotes set
T4712 423-426 DT denotes the
T4713 440-443 NN denotes QTL
T4714 427-432 JJ denotes small
T4715 433-439 NN denotes effect
T4716 432-433 HYPH denotes -
T4717 443-445 , denotes ,
T4718 445-448 DT denotes the
T4719 459-464 NN denotes value
T4720 449-458 NN denotes threshold
T4721 465-467 IN denotes of
T4722 468-475 NN denotes linkage
T4723 476-479 VBD denotes was
T4724 484-486 IN denotes as
T4725 487-488 NN denotes P
T4726 491-495 CD denotes 0.05
T4727 489-490 SYM denotes =
T4728 496-497 -LRB- denotes (
T4729 508-512 NN denotes test
T4730 497-500 NN denotes Chi
T4731 501-507 NN denotes square
T4732 500-501 HYPH denotes -
T4733 512-513 -RRB- denotes )
T4734 513-514 . denotes .
R1383 T4631 T4632 amod Detailed,information
R1384 T4632 T4633 nsubjpass information,described
R1385 T4634 T4632 prep on,information
R1386 T4635 T4634 pobj genotyping,on
R1387 T4636 T4635 prep of,genotyping
R1388 T4637 T4638 det the,screen
R1389 T4638 T4636 pobj screen,of
R1390 T4639 T4638 compound genome,screen
R1391 T4640 T4633 aux has,described
R1392 T4641 T4633 auxpass been,described
R1393 T4642 T4633 advmod previously,described
R1394 T4643 T4644 punct [,10
R1395 T4644 T4633 parataxis 10,described
R1396 T4645 T4644 punct ],10
R1397 T4646 T4633 punct .,described
R1398 T4648 T4649 prep In,genotyped
R1399 T4650 T4648 amod short,In
R1400 T4651 T4649 punct ", ",genotyped
R1401 T4652 T4649 nsubj we,genotyped
R1402 T4653 T4654 nummod 290,mice
R1403 T4654 T4649 dobj mice,genotyped
R1404 T4655 T4654 compound F2,mice
R1405 T4656 T4649 advcl using,genotyped
R1406 T4657 T4658 nummod 126,markers
R1407 T4658 T4656 dobj markers,using
R1408 T4659 T4658 amod informative,markers
R1409 T4660 T4658 compound microsatellite,markers
R1410 T4661 T4658 acl covering,markers
R1411 T4662 T4663 det the,genome
R1412 T4663 T4661 dobj genome,covering
R1413 T4664 T4661 prep with,covering
R1414 T4665 T4666 det an,distance
R1415 T4666 T4664 pobj distance,with
R1416 T4667 T4666 amod average,distance
R1417 T4668 T4666 amod inter-marker,distance
R1418 T4669 T4666 prep of,distance
R1419 T4670 T4671 nummod 11.5,cM
R1420 T4671 T4669 pobj cM,of
R1421 T4672 T4666 prep for,distance
R1422 T4673 T4674 nummod 290,progeny
R1423 T4674 T4672 pobj progeny,for
R1424 T4675 T4674 compound F2,progeny
R1425 T4676 T4649 punct .,genotyped
R1426 T4678 T4679 det All,analyses
R1427 T4679 T4681 nsubjpass analyses,performed
R1428 T4680 T4679 compound linkage,analyses
R1429 T4682 T4681 auxpass were,performed
R1430 T4683 T4681 prep with,performed
R1431 T4684 T4685 compound QTX,software
R1432 T4685 T4683 pobj software,with
R1433 T4686 T4687 compound Map,manager
R1434 T4687 T4685 compound manager,software
R1435 T4688 T4689 punct [,23
R1436 T4689 T4681 parataxis 23,performed
R1437 T4690 T4689 punct ],23
R1438 T4691 T4681 punct .,performed
R1439 T4693 T4694 det The,phenotype
R1440 T4694 T4697 nsubjpass phenotype,taken
R1441 T4695 T4694 amod main,phenotype
R1442 T4696 T4694 amod clinical,phenotype
R1443 T4698 T4694 prep of,phenotype
R1444 T4699 T4698 pobj CIA,of
R1445 T4700 T4694 punct ", ",phenotype
R1446 T4701 T4702 compound arthritis,severity
R1447 T4702 T4694 appos severity,phenotype
R1448 T4703 T4697 punct ", ",taken
R1449 T4704 T4697 auxpass was,taken
R1450 T4705 T4697 prep as,taken
R1451 T4706 T4705 pobj phenotype,as
R1452 T4707 T4697 punct .,taken
R1453 T4709 T4710 aux To,detect
R1454 T4710 T4711 advcl detect,set
R1455 T4712 T4713 det the,QTL
R1456 T4713 T4710 dobj QTL,detect
R1457 T4714 T4715 amod small,effect
R1458 T4715 T4713 compound effect,QTL
R1460 T4717 T4711 punct ", ",set
R1461 T4718 T4719 det the,value
R1462 T4719 T4711 nsubjpass value,set
R1463 T4720 T4719 compound threshold,value
R1464 T4721 T4719 prep of,value
R1465 T4722 T4721 pobj linkage,of
R1466 T4723 T4711 auxpass was,set
R1467 T4724 T4711 prep as,set
R1468 T4725 T4726 nsubj P,0.05
R1469 T4726 T4724 pcomp 0.05,as
R1470 T4727 T4726 punct =,0.05
R1471 T4728 T4729 punct (,test
R1472 T4729 T4726 parataxis test,0.05
R1473 T4730 T4731 compound Chi,square
R1474 T4731 T4729 compound square,test
R1476 T4733 T4729 punct ),test
R1477 T4734 T4711 punct .,set
R1459 T4716 T4715 punct -,effect
R1475 T4732 T4731 punct -,square

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4621 42-48 SO_EXT:0001026 denotes genome
T4622 122-126 NCBITaxon:10088 denotes mice
T4623 149-163 SO_EXT:microsatellite_unit_or_region denotes microsatellite
T4624 164-171 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes markers
T4625 185-191 SO_EXT:0001026 denotes genome
T4626 214-220 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T4627 440-443 SO_EXT:0000771 denotes QTL

2_test

Id Subject Object Predicate Lexical cue
17244351-15529344-4361126 87-89 15529344 denotes 10
17244351-11707780-4361127 328-330 11707780 denotes 23

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T4617 42-48 SO:0001026 denotes genome
T4618 122-126 NCBITaxon:10088 denotes mice
T4619 185-191 SO:0001026 denotes genome
T4620 440-443 SO:0000771 denotes QTL