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Id Subject Object Predicate Lexical cue
T13869 0-7 JJ denotes Several
T13870 8-15 NNS denotes studies
T13871 26-33 VBN denotes carried
T13872 16-20 VBP denotes have
T13873 21-25 VBN denotes been
T13874 34-37 RP denotes out
T13875 38-40 TO denotes to
T13876 41-47 VB denotes detect
T13877 48-52 NN denotes gene
T13878 53-63 NN denotes expression
T13879 64-70 IN denotes during
T13880 71-74 NN denotes CIA
T13881 74-76 , denotes ,
T13882 76-79 DT denotes all
T13883 89-93 VBD denotes used
T13884 80-82 IN denotes of
T13885 83-88 WDT denotes which
T13886 94-100 NNS denotes joints
T13887 101-103 IN denotes as
T13888 104-107 DT denotes the
T13889 115-121 NN denotes tissue
T13890 108-114 NN denotes target
T13891 122-123 -LRB- denotes [
T13892 132-134 CD denotes 22
T13893 123-125 CD denotes 15
T13894 125-126 , denotes ,
T13895 126-128 CD denotes 16
T13896 128-129 , denotes ,
T13897 129-131 CD denotes 21
T13898 131-132 , denotes ,
T13899 134-135 -RRB- denotes ]
T13900 135-136 . denotes .
T13901 136-212 sentence denotes This study, for the first time, detected gene expression in LNs during CIA.
T13902 137-141 DT denotes This
T13903 142-147 NN denotes study
T13904 169-177 VBD denotes detected
T13905 147-149 , denotes ,
T13906 149-152 IN denotes for
T13907 153-156 DT denotes the
T13908 163-167 NN denotes time
T13909 157-162 JJ denotes first
T13910 167-169 , denotes ,
T13911 178-182 NN denotes gene
T13912 183-193 NN denotes expression
T13913 194-196 IN denotes in
T13914 197-200 NNS denotes LNs
T13915 201-207 IN denotes during
T13916 208-211 NN denotes CIA
T13917 211-212 . denotes .
T13918 212-364 sentence denotes We present an extensive study of gene expression patterns in LNs of both genetically susceptible and resistant strains at four different phases of CIA.
T13919 213-215 PRP denotes We
T13920 216-223 VBP denotes present
T13921 224-226 DT denotes an
T13922 237-242 NN denotes study
T13923 227-236 JJ denotes extensive
T13924 243-245 IN denotes of
T13925 246-250 NN denotes gene
T13926 262-270 NNS denotes patterns
T13927 251-261 NN denotes expression
T13928 271-273 IN denotes in
T13929 274-277 NNS denotes LNs
T13930 278-280 IN denotes of
T13931 281-285 CC denotes both
T13932 324-331 NNS denotes strains
T13933 286-297 RB denotes genetically
T13934 298-309 JJ denotes susceptible
T13935 310-313 CC denotes and
T13936 314-323 JJ denotes resistant
T13937 332-334 IN denotes at
T13938 335-339 CD denotes four
T13939 350-356 NNS denotes phases
T13940 340-349 JJ denotes different
T13941 357-359 IN denotes of
T13942 360-363 NN denotes CIA
T13943 363-364 . denotes .
T13944 364-549 sentence denotes In both strains, differentially regulated genes were highly concentrated at the PI and CA phases, and only a small number of genes were differentially expressed in two or three phases.
T13945 365-367 IN denotes In
T13946 413-417 VBD denotes were
T13947 368-372 DT denotes both
T13948 373-380 NNS denotes strains
T13949 380-382 , denotes ,
T13950 382-396 RB denotes differentially
T13951 397-406 VBN denotes regulated
T13952 407-412 NNS denotes genes
T13953 418-424 RB denotes highly
T13954 425-437 JJ denotes concentrated
T13955 438-440 IN denotes at
T13956 441-444 DT denotes the
T13957 455-461 NNS denotes phases
T13958 445-447 NN denotes PI
T13959 448-451 CC denotes and
T13960 452-454 NN denotes CA
T13961 461-463 , denotes ,
T13962 463-466 CC denotes and
T13963 467-471 RB denotes only
T13964 480-486 NN denotes number
T13965 472-473 DT denotes a
T13966 474-479 JJ denotes small
T13967 516-525 VBN denotes expressed
T13968 487-489 IN denotes of
T13969 490-495 NNS denotes genes
T13970 496-500 VBD denotes were
T13971 501-515 RB denotes differentially
T13972 526-528 IN denotes in
T13973 529-532 CD denotes two
T13974 542-548 NNS denotes phases
T13975 533-535 CC denotes or
T13976 536-541 CD denotes three
T13977 548-549 . denotes .
T13978 549-711 sentence denotes This indicates that biological responses in LNs were stronger in the PI and CA phases than in the OA phase, and the responses at different phases were different.
T13979 550-554 DT denotes This
T13980 555-564 VBZ denotes indicates
T13981 565-569 IN denotes that
T13982 598-602 VBD denotes were
T13983 570-580 JJ denotes biological
T13984 581-590 NNS denotes responses
T13985 591-593 IN denotes in
T13986 594-597 NNS denotes LNs
T13987 603-611 JJR denotes stronger
T13988 612-614 IN denotes in
T13989 615-618 DT denotes the
T13990 629-635 NNS denotes phases
T13991 619-621 NN denotes PI
T13992 622-625 CC denotes and
T13993 626-628 NN denotes CA
T13994 636-640 IN denotes than
T13995 641-643 IN denotes in
T13996 644-647 DT denotes the
T13997 651-656 NN denotes phase
T13998 648-650 NN denotes OA
T13999 656-658 , denotes ,
T14000 658-661 CC denotes and
T14001 662-665 DT denotes the
T14002 666-675 NNS denotes responses
T14003 696-700 VBD denotes were
T14004 676-678 IN denotes at
T14005 679-688 JJ denotes different
T14006 689-695 NNS denotes phases
T14007 701-710 JJ denotes different
T14008 710-711 . denotes .
T14009 711-848 sentence denotes When comparing the susceptible to the resistant strain, the biggest difference was found in one cluster of genes (cluster IV, Figure 2).
T14010 712-716 WRB denotes When
T14011 717-726 VBG denotes comparing
T14012 795-800 VBN denotes found
T14013 727-730 DT denotes the
T14014 731-742 JJ denotes susceptible
T14015 743-745 IN denotes to
T14016 746-749 DT denotes the
T14017 750-759 JJ denotes resistant
T14018 760-766 NN denotes strain
T14019 766-768 , denotes ,
T14020 768-771 DT denotes the
T14021 780-790 NN denotes difference
T14022 772-779 JJS denotes biggest
T14023 791-794 VBD denotes was
T14024 801-803 IN denotes in
T14025 804-807 CD denotes one
T14026 808-815 NN denotes cluster
T14027 816-818 IN denotes of
T14028 819-824 NNS denotes genes
T14029 825-826 -LRB- denotes (
T14030 826-833 NN denotes cluster
T14031 834-836 CD denotes IV
T14032 836-838 , denotes ,
T14033 838-844 NN denotes Figure
T14034 845-846 CD denotes 2
T14035 846-847 -RRB- denotes )
T14036 847-848 . denotes .
T14037 848-1003 sentence denotes These genes had a higher expression in DBA/1 than in FVB/N at the early phases of CIA (NC, PI and OA) and the opposite expression pattern in the CA phase.
T14038 849-854 DT denotes These
T14039 855-860 NNS denotes genes
T14040 861-864 VBD denotes had
T14041 865-866 DT denotes a
T14042 874-884 NN denotes expression
T14043 867-873 JJR denotes higher
T14044 885-887 IN denotes in
T14045 888-891 NN denotes DBA
T14046 891-892 HYPH denotes /
T14047 892-893 CD denotes 1
T14048 894-898 IN denotes than
T14049 899-901 IN denotes in
T14050 902-905 NN denotes FVB
T14051 906-907 NN denotes N
T14052 905-906 HYPH denotes /
T14053 908-910 IN denotes at
T14054 911-914 DT denotes the
T14055 921-927 NNS denotes phases
T14056 915-920 JJ denotes early
T14057 928-930 IN denotes of
T14058 931-934 NN denotes CIA
T14059 935-936 -LRB- denotes (
T14060 936-938 NN denotes NC
T14061 938-940 , denotes ,
T14062 940-942 NN denotes PI
T14063 943-946 CC denotes and
T14064 947-949 NN denotes OA
T14065 949-950 -RRB- denotes )
T14066 951-954 CC denotes and
T14067 955-958 DT denotes the
T14068 979-986 NN denotes pattern
T14069 959-967 JJ denotes opposite
T14070 968-978 NN denotes expression
T14071 987-989 IN denotes in
T14072 990-993 DT denotes the
T14073 997-1002 NN denotes phase
T14074 994-996 NN denotes CA
T14075 1002-1003 . denotes .
T14076 1003-1208 sentence denotes GO term classification revealed that these genes were related to lymphocyte proliferation and activation, suggesting that lymphocytes in the DBA/1 strain are more activated than those in the FVB/N strain.
T14077 1004-1006 NN denotes GO
T14078 1012-1026 NN denotes classification
T14079 1007-1011 NN denotes term
T14080 1027-1035 VBD denotes revealed
T14081 1036-1040 IN denotes that
T14082 1058-1065 VBN denotes related
T14083 1041-1046 DT denotes these
T14084 1047-1052 NNS denotes genes
T14085 1053-1057 VBD denotes were
T14086 1066-1068 IN denotes to
T14087 1069-1079 NN denotes lymphocyte
T14088 1080-1093 NN denotes proliferation
T14089 1094-1097 CC denotes and
T14090 1098-1108 NN denotes activation
T14091 1108-1110 , denotes ,
T14092 1110-1120 VBG denotes suggesting
T14093 1121-1125 IN denotes that
T14094 1158-1161 VBP denotes are
T14095 1126-1137 NNS denotes lymphocytes
T14096 1138-1140 IN denotes in
T14097 1141-1144 DT denotes the
T14098 1151-1157 NN denotes strain
T14099 1145-1148 NN denotes DBA
T14100 1148-1149 HYPH denotes /
T14101 1149-1150 CD denotes 1
T14102 1162-1166 RBR denotes more
T14103 1167-1176 JJ denotes activated
T14104 1177-1181 IN denotes than
T14105 1182-1187 DT denotes those
T14106 1188-1190 IN denotes in
T14107 1191-1194 DT denotes the
T14108 1201-1207 NN denotes strain
T14109 1195-1198 NN denotes FVB
T14110 1199-1200 NN denotes N
T14111 1198-1199 HYPH denotes /
T14112 1207-1208 . denotes .
T14113 1208-1349 sentence denotes However, this difference is not CIA specific because the expression difference between the two strains existed in mice without immunisation.
T14114 1209-1216 RB denotes However
T14115 1234-1236 VBZ denotes is
T14116 1216-1218 , denotes ,
T14117 1218-1222 DT denotes this
T14118 1223-1233 NN denotes difference
T14119 1237-1240 RB denotes not
T14120 1241-1244 NN denotes CIA
T14121 1245-1253 JJ denotes specific
T14122 1254-1261 IN denotes because
T14123 1312-1319 VBD denotes existed
T14124 1262-1265 DT denotes the
T14125 1277-1287 NN denotes difference
T14126 1266-1276 NN denotes expression
T14127 1288-1295 IN denotes between
T14128 1296-1299 DT denotes the
T14129 1304-1311 NNS denotes strains
T14130 1300-1303 CD denotes two
T14131 1320-1322 IN denotes in
T14132 1323-1327 NNS denotes mice
T14133 1328-1335 IN denotes without
T14134 1336-1348 NN denotes immunisation
T14135 1348-1349 . denotes .
T14136 1349-1482 sentence denotes Additionally, some genes related to the immune response were upregulated in the DBA/1 strain but not in the FVB/N strain during CIA.
T14137 1350-1362 RB denotes Additionally
T14138 1411-1422 VBN denotes upregulated
T14139 1362-1364 , denotes ,
T14140 1364-1368 DT denotes some
T14141 1369-1374 NNS denotes genes
T14142 1375-1382 VBN denotes related
T14143 1383-1385 IN denotes to
T14144 1386-1389 DT denotes the
T14145 1397-1405 NN denotes response
T14146 1390-1396 JJ denotes immune
T14147 1406-1410 VBD denotes were
T14148 1423-1425 IN denotes in
T14149 1426-1429 DT denotes the
T14150 1436-1442 NN denotes strain
T14151 1430-1433 NN denotes DBA
T14152 1433-1434 HYPH denotes /
T14153 1434-1435 CD denotes 1
T14154 1443-1446 CC denotes but
T14155 1447-1450 RB denotes not
T14156 1451-1453 IN denotes in
T14157 1454-1457 DT denotes the
T14158 1464-1470 NN denotes strain
T14159 1458-1461 NN denotes FVB
T14160 1462-1463 NN denotes N
T14161 1461-1462 HYPH denotes /
T14162 1471-1477 IN denotes during
T14163 1478-1481 NN denotes CIA
T14164 1481-1482 . denotes .
T14165 1482-1713 sentence denotes These differences could explain why a higher antibody response to collagen II occurred in the DBA/1 strain compared to the FVB/N strain, and might partially explain the difference of the susceptibility to CIA between both strains.
T14166 1483-1488 DT denotes These
T14167 1489-1500 NNS denotes differences
T14168 1507-1514 VB denotes explain
T14169 1501-1506 MD denotes could
T14170 1515-1518 WRB denotes why
T14171 1561-1569 VBD denotes occurred
T14172 1519-1520 DT denotes a
T14173 1537-1545 NN denotes response
T14174 1521-1527 JJR denotes higher
T14175 1528-1536 NN denotes antibody
T14176 1546-1548 IN denotes to
T14177 1549-1557 NN denotes collagen
T14178 1558-1560 CD denotes II
T14179 1570-1572 IN denotes in
T14180 1573-1576 DT denotes the
T14181 1583-1589 NN denotes strain
T14182 1577-1580 NN denotes DBA
T14183 1580-1581 HYPH denotes /
T14184 1581-1582 CD denotes 1
T14185 1590-1598 VBN denotes compared
T14186 1599-1601 IN denotes to
T14187 1602-1605 DT denotes the
T14188 1612-1618 NN denotes strain
T14189 1606-1609 NN denotes FVB
T14190 1610-1611 NN denotes N
T14191 1609-1610 HYPH denotes /
T14192 1618-1620 , denotes ,
T14193 1620-1623 CC denotes and
T14194 1624-1629 MD denotes might
T14195 1640-1647 VB denotes explain
T14196 1630-1639 RB denotes partially
T14197 1648-1651 DT denotes the
T14198 1652-1662 NN denotes difference
T14199 1663-1665 IN denotes of
T14200 1666-1669 DT denotes the
T14201 1670-1684 NN denotes susceptibility
T14202 1685-1687 IN denotes to
T14203 1688-1691 NN denotes CIA
T14204 1692-1699 IN denotes between
T14205 1700-1704 DT denotes both
T14206 1705-1712 NNS denotes strains
T14207 1712-1713 . denotes .
R3885 T13869 T13870 amod Several,studies
R3886 T13870 T13871 nsubjpass studies,carried
R3887 T13872 T13871 aux have,carried
R3888 T13873 T13871 auxpass been,carried
R3889 T13874 T13871 prt out,carried
R3890 T13875 T13876 aux to,detect
R3891 T13876 T13871 advcl detect,carried
R3892 T13877 T13878 compound gene,expression
R3893 T13878 T13876 dobj expression,detect
R3894 T13879 T13876 prep during,detect
R3895 T13880 T13879 pobj CIA,during
R3896 T13881 T13871 punct ", ",carried
R3897 T13882 T13883 dep all,used
R3898 T13883 T13871 ccomp used,carried
R3899 T13884 T13882 prep of,all
R3900 T13885 T13884 pobj which,of
R3901 T13886 T13883 dobj joints,used
R3902 T13887 T13883 prep as,used
R3903 T13888 T13889 det the,tissue
R3904 T13889 T13887 pobj tissue,as
R3905 T13890 T13889 compound target,tissue
R3906 T13891 T13892 punct [,22
R3907 T13892 T13871 parataxis 22,carried
R3908 T13893 T13892 nummod 15,22
R3909 T13894 T13892 punct ",",22
R3910 T13895 T13892 nummod 16,22
R3911 T13896 T13892 punct ",",22
R3912 T13897 T13892 nummod 21,22
R3913 T13898 T13892 punct ",",22
R3914 T13899 T13892 punct ],22
R3915 T13900 T13871 punct .,carried
R3916 T13902 T13903 det This,study
R3917 T13903 T13904 nsubj study,detected
R3918 T13905 T13904 punct ", ",detected
R3919 T13906 T13904 prep for,detected
R3920 T13907 T13908 det the,time
R3921 T13908 T13906 pobj time,for
R3922 T13909 T13908 amod first,time
R3923 T13910 T13904 punct ", ",detected
R3924 T13911 T13912 compound gene,expression
R3925 T13912 T13904 dobj expression,detected
R3926 T13913 T13904 prep in,detected
R3927 T13914 T13913 pobj LNs,in
R3928 T13915 T13904 prep during,detected
R3929 T13916 T13915 pobj CIA,during
R3930 T13917 T13904 punct .,detected
R3931 T13919 T13920 nsubj We,present
R3932 T13921 T13922 det an,study
R3933 T13922 T13920 dobj study,present
R3934 T13923 T13922 amod extensive,study
R3935 T13924 T13922 prep of,study
R3936 T13925 T13926 compound gene,patterns
R3937 T13926 T13924 pobj patterns,of
R3938 T13927 T13926 compound expression,patterns
R3939 T13928 T13922 prep in,study
R3940 T13929 T13928 pobj LNs,in
R3941 T13930 T13929 prep of,LNs
R3942 T13931 T13932 preconj both,strains
R3943 T13932 T13930 pobj strains,of
R3944 T13933 T13934 advmod genetically,susceptible
R3945 T13934 T13932 amod susceptible,strains
R3946 T13935 T13934 cc and,susceptible
R3947 T13936 T13934 conj resistant,susceptible
R3948 T13937 T13922 prep at,study
R3949 T13938 T13939 nummod four,phases
R3950 T13939 T13937 pobj phases,at
R3951 T13940 T13939 amod different,phases
R3952 T13941 T13939 prep of,phases
R3953 T13942 T13941 pobj CIA,of
R3954 T13943 T13920 punct .,present
R3955 T13945 T13946 prep In,were
R3956 T13947 T13948 det both,strains
R3957 T13948 T13945 pobj strains,In
R3958 T13949 T13946 punct ", ",were
R3959 T13950 T13951 advmod differentially,regulated
R3960 T13951 T13952 amod regulated,genes
R3961 T13952 T13946 nsubj genes,were
R3962 T13953 T13954 advmod highly,concentrated
R3963 T13954 T13946 acomp concentrated,were
R3964 T13955 T13946 prep at,were
R3965 T13956 T13957 det the,phases
R3966 T13957 T13955 pobj phases,at
R3967 T13958 T13957 nmod PI,phases
R3968 T13959 T13958 cc and,PI
R3969 T13960 T13958 conj CA,PI
R3970 T13961 T13946 punct ", ",were
R3971 T13962 T13946 cc and,were
R3972 T13963 T13964 advmod only,number
R3973 T13964 T13967 nsubjpass number,expressed
R3974 T13965 T13964 det a,number
R3975 T13966 T13964 amod small,number
R3976 T13967 T13946 conj expressed,were
R3977 T13968 T13964 prep of,number
R3978 T13969 T13968 pobj genes,of
R3979 T13970 T13967 auxpass were,expressed
R3980 T13971 T13967 advmod differentially,expressed
R3981 T13972 T13967 prep in,expressed
R3982 T13973 T13974 nummod two,phases
R3983 T13974 T13972 pobj phases,in
R3984 T13975 T13973 cc or,two
R3985 T13976 T13973 conj three,two
R3986 T13977 T13967 punct .,expressed
R3987 T13979 T13980 nsubj This,indicates
R3988 T13981 T13982 mark that,were
R3989 T13982 T13980 ccomp were,indicates
R3990 T13983 T13984 amod biological,responses
R3991 T13984 T13982 nsubj responses,were
R3992 T13985 T13984 prep in,responses
R3993 T13986 T13985 pobj LNs,in
R3994 T13987 T13982 acomp stronger,were
R3995 T13988 T13987 prep in,stronger
R3996 T13989 T13990 det the,phases
R3997 T13990 T13988 pobj phases,in
R3998 T13991 T13990 nmod PI,phases
R3999 T13992 T13991 cc and,PI
R4000 T13993 T13991 conj CA,PI
R4001 T13994 T13987 prep than,stronger
R4002 T13995 T13994 prep in,than
R4003 T13996 T13997 det the,phase
R4004 T13997 T13995 pobj phase,in
R4005 T13998 T13997 compound OA,phase
R4006 T13999 T13982 punct ", ",were
R4007 T14000 T13982 cc and,were
R4008 T14001 T14002 det the,responses
R4009 T14002 T14003 nsubj responses,were
R4010 T14003 T13982 conj were,were
R4011 T14004 T14002 prep at,responses
R4012 T14005 T14006 amod different,phases
R4013 T14006 T14004 pobj phases,at
R4014 T14007 T14003 acomp different,were
R4015 T14008 T13980 punct .,indicates
R4016 T14010 T14011 advmod When,comparing
R4017 T14011 T14012 advcl comparing,found
R4018 T14013 T14014 det the,susceptible
R4019 T14014 T14011 dative susceptible,comparing
R4020 T14015 T14011 prep to,comparing
R4021 T14016 T14017 det the,resistant
R4022 T14017 T14015 pobj resistant,to
R4023 T14018 T14011 dobj strain,comparing
R4024 T14019 T14012 punct ", ",found
R4025 T14020 T14021 det the,difference
R4026 T14021 T14012 nsubjpass difference,found
R4027 T14022 T14021 amod biggest,difference
R4028 T14023 T14012 auxpass was,found
R4029 T14024 T14012 prep in,found
R4030 T14025 T14026 nummod one,cluster
R4031 T14026 T14024 pobj cluster,in
R4032 T14027 T14026 prep of,cluster
R4033 T14028 T14027 pobj genes,of
R4034 T14029 T14026 punct (,cluster
R4035 T14030 T14026 appos cluster,cluster
R4036 T14031 T14030 nummod IV,cluster
R4037 T14032 T14033 punct ", ",Figure
R4038 T14033 T14012 parataxis Figure,found
R4039 T14034 T14033 nummod 2,Figure
R4040 T14035 T14033 punct ),Figure
R4041 T14036 T14012 punct .,found
R4042 T14038 T14039 det These,genes
R4043 T14039 T14040 nsubj genes,had
R4044 T14041 T14042 det a,expression
R4045 T14042 T14040 dobj expression,had
R4046 T14043 T14042 amod higher,expression
R4047 T14044 T14042 prep in,expression
R4048 T14045 T14044 pobj DBA,in
R4049 T14046 T14045 punct /,DBA
R4050 T14047 T14045 nummod 1,DBA
R4051 T14048 T14042 prep than,expression
R4052 T14049 T14048 prep in,than
R4053 T14050 T14051 compound FVB,N
R4054 T14051 T14049 pobj N,in
R4055 T14052 T14051 punct /,N
R4056 T14053 T14040 prep at,had
R4057 T14054 T14055 det the,phases
R4058 T14055 T14053 pobj phases,at
R4059 T14056 T14055 amod early,phases
R4060 T14057 T14055 prep of,phases
R4061 T14058 T14057 pobj CIA,of
R4062 T14059 T14060 punct (,NC
R4063 T14060 T14055 parataxis NC,phases
R4064 T14061 T14060 punct ", ",NC
R4065 T14062 T14060 conj PI,NC
R4066 T14063 T14062 cc and,PI
R4067 T14064 T14062 conj OA,PI
R4068 T14065 T14060 punct ),NC
R4069 T14066 T14040 cc and,had
R4070 T14067 T14068 det the,pattern
R4071 T14068 T14040 conj pattern,had
R4072 T14069 T14068 amod opposite,pattern
R4073 T14070 T14068 compound expression,pattern
R4074 T14071 T14068 prep in,pattern
R4075 T14072 T14073 det the,phase
R4076 T14073 T14071 pobj phase,in
R4077 T14074 T14073 compound CA,phase
R4078 T14075 T14040 punct .,had
R4079 T14077 T14078 compound GO,classification
R4080 T14078 T14080 nsubj classification,revealed
R4081 T14079 T14078 compound term,classification
R4082 T14081 T14082 mark that,related
R4083 T14082 T14080 ccomp related,revealed
R4084 T14083 T14084 det these,genes
R4085 T14084 T14082 nsubjpass genes,related
R4086 T14085 T14082 auxpass were,related
R4087 T14086 T14082 prep to,related
R4088 T14087 T14088 compound lymphocyte,proliferation
R4089 T14088 T14086 pobj proliferation,to
R4090 T14089 T14088 cc and,proliferation
R4091 T14090 T14088 conj activation,proliferation
R4092 T14091 T14082 punct ", ",related
R4093 T14092 T14082 advcl suggesting,related
R4094 T14093 T14094 mark that,are
R4095 T14094 T14092 ccomp are,suggesting
R4096 T14095 T14094 nsubj lymphocytes,are
R4097 T14096 T14095 prep in,lymphocytes
R4098 T14097 T14098 det the,strain
R4099 T14098 T14096 pobj strain,in
R4100 T14099 T14098 nmod DBA,strain
R4101 T14100 T14099 punct /,DBA
R4102 T14123 T14115 advcl existed,is
R4103 T14101 T14099 nummod 1,DBA
R4104 T14124 T14125 det the,difference
R4105 T14102 T14103 advmod more,activated
R4106 T14125 T14123 nsubj difference,existed
R4107 T14126 T14125 compound expression,difference
R4109 T14103 T14094 acomp activated,are
R4110 T14128 T14129 det the,strains
R4112 T14104 T14103 prep than,activated
R4113 T14130 T14129 nummod two,strains
R4114 T14131 T14123 prep in,existed
R4115 T14132 T14131 pobj mice,in
R4116 T14105 T14104 pobj those,than
R4117 T14133 T14132 prep without,mice
R4118 T14134 T14133 pobj immunisation,without
R4119 T14135 T14115 punct .,is
R4120 T14106 T14105 prep in,those
R4121 T14137 T14138 advmod Additionally,upregulated
R4122 T14107 T14108 det the,strain
R4123 T14139 T14138 punct ", ",upregulated
R4124 T14108 T14106 pobj strain,in
R4125 T14140 T14141 det some,genes
R4126 T14141 T14138 nsubjpass genes,upregulated
R4127 T14142 T14141 acl related,genes
R4128 T14109 T14110 compound FVB,N
R4129 T14143 T14142 prep to,related
R4130 T14144 T14145 det the,response
R4131 T14110 T14108 compound N,strain
R4132 T14145 T14143 pobj response,to
R4133 T14146 T14145 amod immune,response
R4134 T14147 T14138 auxpass were,upregulated
R4135 T14148 T14138 prep in,upregulated
R4136 T14149 T14150 det the,strain
R4137 T14150 T14148 pobj strain,in
R4138 T14111 T14110 punct /,N
R4139 T14151 T14150 nmod DBA,strain
R4140 T14152 T14151 punct /,DBA
R4141 T14153 T14151 nummod 1,DBA
R4142 T14112 T14080 punct .,revealed
R4143 T14154 T14148 cc but,in
R4144 T14155 T14154 neg not,but
R4145 T14156 T14148 conj in,in
R4146 T14157 T14158 det the,strain
R4147 T14114 T14115 advmod However,is
R4148 T14158 T14156 pobj strain,in
R4149 T14159 T14160 compound FVB,N
R4150 T14160 T14158 compound N,strain
R4151 T14161 T14160 punct /,N
R4152 T14116 T14115 punct ", ",is
R4153 T14162 T14138 prep during,upregulated
R4154 T14163 T14162 pobj CIA,during
R4155 T14164 T14138 punct .,upregulated
R4156 T14166 T14167 det These,differences
R4157 T14117 T14118 det this,difference
R4158 T14167 T14168 nsubj differences,explain
R4159 T14169 T14168 aux could,explain
R4160 T14118 T14115 nsubj difference,is
R4161 T14170 T14171 advmod why,occurred
R4162 T14119 T14115 neg not,is
R4163 T14120 T14121 npadvmod CIA,specific
R4164 T14171 T14168 ccomp occurred,explain
R4165 T14172 T14173 det a,response
R4166 T14121 T14115 acomp specific,is
R4167 T14173 T14171 nsubj response,occurred
R4168 T14174 T14173 amod higher,response
R4169 T14175 T14173 compound antibody,response
R4170 T14122 T14123 mark because,existed
R4171 T14176 T14173 prep to,response
R4172 T14177 T14176 pobj collagen,to
R4173 T14178 T14177 nummod II,collagen
R4174 T14179 T14171 prep in,occurred
R4176 T14180 T14181 det the,strain
R4177 T14181 T14179 pobj strain,in
R4178 T14182 T14181 nmod DBA,strain
R4179 T14183 T14182 punct /,DBA
R4181 T14184 T14182 nummod 1,DBA
R4182 T14185 T14171 prep compared,occurred
R4184 T14186 T14185 prep to,compared
R4185 T14187 T14188 det the,strain
R4186 T14188 T14186 pobj strain,to
R4187 T14189 T14190 compound FVB,N
R4188 T14190 T14188 compound N,strain
R4190 T14191 T14190 punct /,N
R4191 T14192 T14168 punct ", ",explain
R4192 T14193 T14168 cc and,explain
R4193 T14194 T14195 aux might,explain
R4195 T14195 T14168 conj explain,explain
R4197 T14196 T14195 advmod partially,explain
R4198 T14197 T14198 det the,difference
R4199 T14198 T14195 dobj difference,explain
R4200 T14199 T14198 prep of,difference
R4202 T14200 T14201 det the,susceptibility
R4203 T14201 T14199 pobj susceptibility,of
R4204 T14202 T14201 prep to,susceptibility
R4205 T14203 T14202 pobj CIA,to
R4207 T14204 T14198 prep between,difference
R4208 T14205 T14206 det both,strains
R4209 T14206 T14204 pobj strains,between
R4211 T14207 T14168 punct .,explain
R4108 T14127 T14125 prep between,difference
R4111 T14129 T14127 pobj strains,between

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T13375 48-52 SO_EXT:0000704 denotes gene
T13376 48-63 GO:0010467 denotes gene expression
T13377 94-100 UBERON:0004905 denotes joints
T13378 115-121 UBERON:0000479 denotes tissue
T13379 178-182 SO_EXT:0000704 denotes gene
T13380 178-193 GO:0010467 denotes gene expression
T13381 197-200 UBERON:0000029 denotes LNs
T13382 246-250 SO_EXT:0000704 denotes gene
T13383 246-261 GO:0010467 denotes gene expression
T13384 274-277 UBERON:0000029 denotes LNs
T13385 286-297 SO_EXT:0000704 denotes genetically
T13386 397-406 GO:0065007 denotes regulated
T13387 407-412 SO_EXT:0000704 denotes genes
T13388 490-495 SO_EXT:0000704 denotes genes
T13389 516-525 GO:0010467 denotes expressed
T13390 570-580 CHEBI_GO_EXT:biological_process_or_quality_or_role denotes biological
T13391 581-590 GO_EXT:reaction_or_response denotes responses
T13392 594-597 UBERON:0000029 denotes LNs
T13393 666-675 GO_EXT:reaction_or_response denotes responses
T13394 819-824 SO_EXT:0000704 denotes genes
T13395 855-860 SO_EXT:0000704 denotes genes
T13396 874-884 GO:0010467 denotes expression
T13397 968-978 GO:0010467 denotes expression
T13398 1047-1052 SO_EXT:0000704 denotes genes
T13399 1069-1079 CL:0000542 denotes lymphocyte
T13400 1069-1093 GO:0046651 denotes lymphocyte proliferation
T13401 1069-1079 _FRAGMENT denotes lymphocyte
T13402 1098-1108 GO:0046649 denotes activation
T13403 1126-1137 CL:0000542 denotes lymphocytes
T13404 1266-1276 GO:0010467 denotes expression
T13405 1323-1327 NCBITaxon:10088 denotes mice
T13406 1369-1374 SO_EXT:0000704 denotes genes
T13407 1390-1396 UBERON:0002405 denotes immune
T13408 1390-1405 GO:0006955 denotes immune response
T13409 1411-1422 GO_EXT:positive_regulation denotes upregulated
T13410 1528-1536 GO:0042571 denotes antibody
T13411 1528-1545 GO:0016064 denotes antibody response
T13412 1549-1557 CHEBI_PR_EXT:collagen denotes collagen
T13413 1549-1560 PR_EXT:000003266 denotes collagen II
R3519 T13402 T13401 _lexicallyChainedTo activation,lymphocyte

2_test

Id Subject Object Predicate Lexical cue
17244351-12482389-4361143 123-125 12482389 denotes 15
17244351-11908948-4361144 126-128 11908948 denotes 16
17244351-15987489-4361145 129-131 15987489 denotes 21
17244351-15743466-4361146 132-134 15743466 denotes 22

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T13234 48-52 SO:0000704 denotes gene
T13235 48-63 GO:0010467 denotes gene expression
T13236 94-100 UBERON:0004905 denotes joints
T13237 115-121 UBERON:0000479 denotes tissue
T13238 178-182 SO:0000704 denotes gene
T13239 178-193 GO:0010467 denotes gene expression
T13240 197-200 UBERON:0000029 denotes LNs
T13241 246-250 SO:0000704 denotes gene
T13242 246-261 GO:0010467 denotes gene expression
T13243 274-277 UBERON:0000029 denotes LNs
T13244 286-297 SO:0000704 denotes genetically
T13245 397-406 GO:0065007 denotes regulated
T13246 407-412 SO:0000704 denotes genes
T13247 490-495 SO:0000704 denotes genes
T13248 516-525 GO:0010467 denotes expressed
T13249 594-597 UBERON:0000029 denotes LNs
T13250 819-824 SO:0000704 denotes genes
T13251 855-860 SO:0000704 denotes genes
T13252 874-884 GO:0010467 denotes expression
T13253 968-978 GO:0010467 denotes expression
T13254 1047-1052 SO:0000704 denotes genes
T13255 1069-1079 CL:0000542 denotes lymphocyte
T13256 1069-1093 GO:0046651 denotes lymphocyte proliferation
T13257 1069-1079 _FRAGMENT denotes lymphocyte
T13258 1098-1108 GO:0046649 denotes activation
T13259 1126-1137 CL:0000542 denotes lymphocytes
T13260 1266-1276 GO:0010467 denotes expression
T13261 1323-1327 NCBITaxon:10088 denotes mice
T13262 1369-1374 SO:0000704 denotes genes
T13263 1390-1396 UBERON:0002405 denotes immune
T13264 1390-1405 GO:0006955 denotes immune response
T13265 1528-1536 GO:0042571 denotes antibody
T13266 1528-1545 GO:0016064 denotes antibody response
T13267 1549-1560 PR:000003266 denotes collagen II
R3512 T13258 T13257 _lexicallyChainedTo activation,lymphocyte