Id |
Subject |
Object |
Predicate |
Lexical cue |
T10781 |
0-9 |
NN |
denotes |
Candidate |
T10782 |
10-15 |
NNS |
denotes |
genes |
T10783 |
16-19 |
IN |
denotes |
for |
T10784 |
20-23 |
DT |
denotes |
the |
T10785 |
37-40 |
NNS |
denotes |
QTL |
T10786 |
24-29 |
JJ |
denotes |
small |
T10787 |
30-36 |
NN |
denotes |
effect |
T10788 |
29-30 |
HYPH |
denotes |
- |
T10789 |
41-43 |
IN |
denotes |
of |
T10790 |
44-47 |
NN |
denotes |
CIA |
T10791 |
47-314 |
sentence |
denotes |
To identify candidate susceptibility genes for the CIA small-effect QTL, we compared the list of strain-specific differentially expressed genes with the list of disease-specific differentially expressed genes; 117 genes were shared by both lists (Additional file 3). |
T10792 |
48-50 |
TO |
denotes |
To |
T10793 |
51-59 |
VB |
denotes |
identify |
T10794 |
124-132 |
VBD |
denotes |
compared |
T10795 |
60-69 |
NN |
denotes |
candidate |
T10796 |
85-90 |
NNS |
denotes |
genes |
T10797 |
70-84 |
NN |
denotes |
susceptibility |
T10798 |
91-94 |
IN |
denotes |
for |
T10799 |
95-98 |
DT |
denotes |
the |
T10800 |
116-119 |
NNS |
denotes |
QTL |
T10801 |
99-102 |
NN |
denotes |
CIA |
T10802 |
103-108 |
JJ |
denotes |
small |
T10803 |
109-115 |
NN |
denotes |
effect |
T10804 |
108-109 |
HYPH |
denotes |
- |
T10805 |
119-121 |
, |
denotes |
, |
T10806 |
121-123 |
PRP |
denotes |
we |
T10807 |
273-279 |
VBN |
denotes |
shared |
T10808 |
133-136 |
DT |
denotes |
the |
T10809 |
137-141 |
NN |
denotes |
list |
T10810 |
142-144 |
IN |
denotes |
of |
T10811 |
145-151 |
NN |
denotes |
strain |
T10812 |
152-160 |
JJ |
denotes |
specific |
T10813 |
151-152 |
HYPH |
denotes |
- |
T10814 |
186-191 |
NNS |
denotes |
genes |
T10815 |
161-175 |
RB |
denotes |
differentially |
T10816 |
176-185 |
VBN |
denotes |
expressed |
T10817 |
192-196 |
IN |
denotes |
with |
T10818 |
197-200 |
DT |
denotes |
the |
T10819 |
201-205 |
NN |
denotes |
list |
T10820 |
206-208 |
IN |
denotes |
of |
T10821 |
209-216 |
NN |
denotes |
disease |
T10822 |
217-225 |
JJ |
denotes |
specific |
T10823 |
216-217 |
HYPH |
denotes |
- |
T10824 |
251-256 |
NNS |
denotes |
genes |
T10825 |
226-240 |
RB |
denotes |
differentially |
T10826 |
241-250 |
VBN |
denotes |
expressed |
T10827 |
256-257 |
: |
denotes |
; |
T10828 |
258-261 |
CD |
denotes |
117 |
T10829 |
262-267 |
NNS |
denotes |
genes |
T10830 |
268-272 |
VBD |
denotes |
were |
T10831 |
280-282 |
IN |
denotes |
by |
T10832 |
283-287 |
DT |
denotes |
both |
T10833 |
288-293 |
NNS |
denotes |
lists |
T10834 |
294-295 |
-LRB- |
denotes |
( |
T10835 |
306-310 |
NN |
denotes |
file |
T10836 |
295-305 |
JJ |
denotes |
Additional |
T10837 |
311-312 |
CD |
denotes |
3 |
T10838 |
312-313 |
-RRB- |
denotes |
) |
T10839 |
313-314 |
. |
denotes |
. |
T10840 |
314-428 |
sentence |
denotes |
Figure 3 visualises positions of the 117 genes retrieved from Ensembl [30] in relation to the 8 small-effect QTL. |
T10841 |
315-321 |
NN |
denotes |
Figure |
T10842 |
324-334 |
VBZ |
denotes |
visualises |
T10843 |
322-323 |
CD |
denotes |
3 |
T10844 |
335-344 |
NNS |
denotes |
positions |
T10845 |
345-347 |
IN |
denotes |
of |
T10846 |
348-351 |
DT |
denotes |
the |
T10847 |
356-361 |
NNS |
denotes |
genes |
T10848 |
352-355 |
CD |
denotes |
117 |
T10849 |
362-371 |
VBN |
denotes |
retrieved |
T10850 |
372-376 |
IN |
denotes |
from |
T10851 |
377-384 |
NNP |
denotes |
Ensembl |
T10852 |
385-386 |
-LRB- |
denotes |
[ |
T10853 |
386-388 |
CD |
denotes |
30 |
T10854 |
388-389 |
-RRB- |
denotes |
] |
T10855 |
390-392 |
IN |
denotes |
in |
T10856 |
393-401 |
NN |
denotes |
relation |
T10857 |
402-404 |
IN |
denotes |
to |
T10858 |
405-408 |
DT |
denotes |
the |
T10859 |
424-427 |
NNS |
denotes |
QTL |
T10860 |
409-410 |
CD |
denotes |
8 |
T10861 |
411-416 |
JJ |
denotes |
small |
T10862 |
417-423 |
NN |
denotes |
effect |
T10863 |
416-417 |
HYPH |
denotes |
- |
T10864 |
427-428 |
. |
denotes |
. |
T10865 |
428-502 |
sentence |
denotes |
The eight loci were located on 7 chromosomes, 5, 6, 7, 10, 11, 16 and 17. |
T10866 |
429-432 |
DT |
denotes |
The |
T10867 |
439-443 |
NNS |
denotes |
loci |
T10868 |
433-438 |
CD |
denotes |
eight |
T10869 |
449-456 |
VBN |
denotes |
located |
T10870 |
444-448 |
VBD |
denotes |
were |
T10871 |
457-459 |
IN |
denotes |
on |
T10872 |
460-461 |
CD |
denotes |
7 |
T10873 |
462-473 |
NNS |
denotes |
chromosomes |
T10874 |
473-475 |
, |
denotes |
, |
T10875 |
475-476 |
CD |
denotes |
5 |
T10876 |
476-478 |
, |
denotes |
, |
T10877 |
478-479 |
CD |
denotes |
6 |
T10878 |
479-481 |
, |
denotes |
, |
T10879 |
481-482 |
CD |
denotes |
7 |
T10880 |
482-484 |
, |
denotes |
, |
T10881 |
484-486 |
CD |
denotes |
10 |
T10882 |
486-488 |
, |
denotes |
, |
T10883 |
488-490 |
CD |
denotes |
11 |
T10884 |
490-492 |
, |
denotes |
, |
T10885 |
492-494 |
CD |
denotes |
16 |
T10886 |
495-498 |
CC |
denotes |
and |
T10887 |
499-501 |
CD |
denotes |
17 |
T10888 |
501-502 |
. |
denotes |
. |
T10889 |
502-633 |
sentence |
denotes |
Since the confidence intervals of QTL in F2 progeny are around 20 cM [26], we used 40 Mb as the confidence intervals for all loci. |
T10890 |
503-508 |
IN |
denotes |
Since |
T10891 |
555-558 |
VBP |
denotes |
are |
T10892 |
509-512 |
DT |
denotes |
the |
T10893 |
524-533 |
NNS |
denotes |
intervals |
T10894 |
513-523 |
NN |
denotes |
confidence |
T10895 |
534-536 |
IN |
denotes |
of |
T10896 |
537-540 |
NNS |
denotes |
QTL |
T10897 |
541-543 |
IN |
denotes |
in |
T10898 |
544-546 |
NN |
denotes |
F2 |
T10899 |
547-554 |
NN |
denotes |
progeny |
T10900 |
581-585 |
VBD |
denotes |
used |
T10901 |
559-565 |
IN |
denotes |
around |
T10902 |
566-568 |
CD |
denotes |
20 |
T10903 |
569-571 |
NN |
denotes |
cM |
T10904 |
572-573 |
-LRB- |
denotes |
[ |
T10905 |
573-575 |
CD |
denotes |
26 |
T10906 |
575-576 |
-RRB- |
denotes |
] |
T10907 |
576-578 |
, |
denotes |
, |
T10908 |
578-580 |
PRP |
denotes |
we |
T10909 |
586-588 |
CD |
denotes |
40 |
T10910 |
589-591 |
NN |
denotes |
Mb |
T10911 |
592-594 |
IN |
denotes |
as |
T10912 |
595-598 |
DT |
denotes |
the |
T10913 |
610-619 |
NNS |
denotes |
intervals |
T10914 |
599-609 |
NN |
denotes |
confidence |
T10915 |
620-623 |
IN |
denotes |
for |
T10916 |
624-627 |
DT |
denotes |
all |
T10917 |
628-632 |
NNS |
denotes |
loci |
T10918 |
632-633 |
. |
denotes |
. |
T10919 |
633-716 |
sentence |
denotes |
Twenty-one genes were located in the confidence intervals of six of the eight QTL. |
T10920 |
634-640 |
CD |
denotes |
Twenty |
T10921 |
641-644 |
CD |
denotes |
one |
T10922 |
640-641 |
HYPH |
denotes |
- |
T10923 |
645-650 |
NNS |
denotes |
genes |
T10924 |
656-663 |
VBN |
denotes |
located |
T10925 |
651-655 |
VBD |
denotes |
were |
T10926 |
664-666 |
IN |
denotes |
in |
T10927 |
667-670 |
DT |
denotes |
the |
T10928 |
682-691 |
NNS |
denotes |
intervals |
T10929 |
671-681 |
NN |
denotes |
confidence |
T10930 |
692-694 |
IN |
denotes |
of |
T10931 |
695-698 |
CD |
denotes |
six |
T10932 |
706-711 |
CD |
denotes |
eight |
T10933 |
699-701 |
IN |
denotes |
of |
T10934 |
702-705 |
DT |
denotes |
the |
T10935 |
712-715 |
NNS |
denotes |
QTL |
T10936 |
715-716 |
. |
denotes |
. |
T10937 |
716-905 |
sentence |
denotes |
We located 5, 4, 2, 1, 3 and 6 potential candidate genes within the confidence intervals of loci 1, 2, 3, 5, 6 and 8, respectively, while no candidate gene was identified for loci 4 and 7. |
T10938 |
717-719 |
PRP |
denotes |
We |
T10939 |
720-727 |
VBD |
denotes |
located |
T10940 |
728-729 |
CD |
denotes |
5 |
T10941 |
768-773 |
NNS |
denotes |
genes |
T10942 |
729-731 |
, |
denotes |
, |
T10943 |
731-732 |
CD |
denotes |
4 |
T10944 |
732-734 |
, |
denotes |
, |
T10945 |
734-735 |
CD |
denotes |
2 |
T10946 |
735-737 |
, |
denotes |
, |
T10947 |
737-738 |
CD |
denotes |
1 |
T10948 |
738-740 |
, |
denotes |
, |
T10949 |
740-741 |
CD |
denotes |
3 |
T10950 |
742-745 |
CC |
denotes |
and |
T10951 |
746-747 |
CD |
denotes |
6 |
T10952 |
748-757 |
JJ |
denotes |
potential |
T10953 |
758-767 |
NN |
denotes |
candidate |
T10954 |
774-780 |
IN |
denotes |
within |
T10955 |
781-784 |
DT |
denotes |
the |
T10956 |
796-805 |
NNS |
denotes |
intervals |
T10957 |
785-795 |
NN |
denotes |
confidence |
T10958 |
806-808 |
IN |
denotes |
of |
T10959 |
809-813 |
NNS |
denotes |
loci |
T10960 |
814-815 |
CD |
denotes |
1 |
T10961 |
815-817 |
, |
denotes |
, |
T10962 |
817-818 |
CD |
denotes |
2 |
T10963 |
818-820 |
, |
denotes |
, |
T10964 |
820-821 |
CD |
denotes |
3 |
T10965 |
821-823 |
, |
denotes |
, |
T10966 |
823-824 |
CD |
denotes |
5 |
T10967 |
824-826 |
, |
denotes |
, |
T10968 |
826-827 |
CD |
denotes |
6 |
T10969 |
828-831 |
CC |
denotes |
and |
T10970 |
832-833 |
CD |
denotes |
8 |
T10971 |
833-835 |
, |
denotes |
, |
T10972 |
835-847 |
RB |
denotes |
respectively |
T10973 |
847-849 |
, |
denotes |
, |
T10974 |
849-854 |
IN |
denotes |
while |
T10975 |
877-887 |
VBN |
denotes |
identified |
T10976 |
855-857 |
DT |
denotes |
no |
T10977 |
868-872 |
NN |
denotes |
gene |
T10978 |
858-867 |
NN |
denotes |
candidate |
T10979 |
873-876 |
VBD |
denotes |
was |
T10980 |
888-891 |
IN |
denotes |
for |
T10981 |
892-896 |
NNS |
denotes |
loci |
T10982 |
897-898 |
CD |
denotes |
4 |
T10983 |
899-902 |
CC |
denotes |
and |
T10984 |
903-904 |
CD |
denotes |
7 |
T10985 |
904-905 |
. |
denotes |
. |
T10986 |
905-973 |
sentence |
denotes |
Table 3 summarises the 21 candidate genes identified in this study. |
T10987 |
906-911 |
NN |
denotes |
Table |
T10988 |
914-924 |
VBZ |
denotes |
summarises |
T10989 |
912-913 |
CD |
denotes |
3 |
T10990 |
925-928 |
DT |
denotes |
the |
T10991 |
942-947 |
NNS |
denotes |
genes |
T10992 |
929-931 |
CD |
denotes |
21 |
T10993 |
932-941 |
NN |
denotes |
candidate |
T10994 |
948-958 |
VBN |
denotes |
identified |
T10995 |
959-961 |
IN |
denotes |
in |
T10996 |
962-966 |
DT |
denotes |
this |
T10997 |
967-972 |
NN |
denotes |
study |
T10998 |
972-973 |
. |
denotes |
. |
T10999 |
973-1090 |
sentence |
denotes |
Two genes, hspa1a and Oas1a, were upregulated at the OA phase of CIA and Oas1a was also upregulated at the PI phase. |
T11000 |
974-977 |
CD |
denotes |
Two |
T11001 |
978-983 |
NNS |
denotes |
genes |
T11002 |
1008-1019 |
VBN |
denotes |
upregulated |
T11003 |
983-985 |
, |
denotes |
, |
T11004 |
985-991 |
NN |
denotes |
hspa1a |
T11005 |
992-995 |
CC |
denotes |
and |
T11006 |
996-1001 |
NN |
denotes |
Oas1a |
T11007 |
1001-1003 |
, |
denotes |
, |
T11008 |
1003-1007 |
VBD |
denotes |
were |
T11009 |
1020-1022 |
IN |
denotes |
at |
T11010 |
1023-1026 |
DT |
denotes |
the |
T11011 |
1030-1035 |
NN |
denotes |
phase |
T11012 |
1027-1029 |
NN |
denotes |
OA |
T11013 |
1036-1038 |
IN |
denotes |
of |
T11014 |
1039-1042 |
NN |
denotes |
CIA |
T11015 |
1043-1046 |
CC |
denotes |
and |
T11016 |
1047-1052 |
NN |
denotes |
Oas1a |
T11017 |
1062-1073 |
VBN |
denotes |
upregulated |
T11018 |
1053-1056 |
VBD |
denotes |
was |
T11019 |
1057-1061 |
RB |
denotes |
also |
T11020 |
1074-1076 |
IN |
denotes |
at |
T11021 |
1077-1080 |
DT |
denotes |
the |
T11022 |
1084-1089 |
NN |
denotes |
phase |
T11023 |
1081-1083 |
NN |
denotes |
PI |
T11024 |
1089-1090 |
. |
denotes |
. |
T11025 |
1090-1185 |
sentence |
denotes |
Except for these two genes, all other 19 genes were downregulated at the chronic phase of CIA. |
T11026 |
1091-1097 |
IN |
denotes |
Except |
T11027 |
1143-1156 |
VBN |
denotes |
downregulated |
T11028 |
1098-1101 |
IN |
denotes |
for |
T11029 |
1102-1107 |
DT |
denotes |
these |
T11030 |
1112-1117 |
NNS |
denotes |
genes |
T11031 |
1108-1111 |
CD |
denotes |
two |
T11032 |
1117-1119 |
, |
denotes |
, |
T11033 |
1119-1122 |
DT |
denotes |
all |
T11034 |
1132-1137 |
NNS |
denotes |
genes |
T11035 |
1123-1128 |
JJ |
denotes |
other |
T11036 |
1129-1131 |
CD |
denotes |
19 |
T11037 |
1138-1142 |
VBD |
denotes |
were |
T11038 |
1157-1159 |
IN |
denotes |
at |
T11039 |
1160-1163 |
DT |
denotes |
the |
T11040 |
1172-1177 |
NN |
denotes |
phase |
T11041 |
1164-1171 |
JJ |
denotes |
chronic |
T11042 |
1178-1180 |
IN |
denotes |
of |
T11043 |
1181-1184 |
NN |
denotes |
CIA |
T11044 |
1184-1185 |
. |
denotes |
. |
T11045 |
1185-1282 |
sentence |
denotes |
All genes, except hspa1a, showed expression differences between the two strains at the NC phase. |
T11046 |
1186-1189 |
DT |
denotes |
All |
T11047 |
1190-1195 |
NNS |
denotes |
genes |
T11048 |
1212-1218 |
VBD |
denotes |
showed |
T11049 |
1195-1197 |
, |
denotes |
, |
T11050 |
1197-1203 |
IN |
denotes |
except |
T11051 |
1204-1210 |
NN |
denotes |
hspa1a |
T11052 |
1210-1212 |
, |
denotes |
, |
T11053 |
1219-1229 |
NN |
denotes |
expression |
T11054 |
1230-1241 |
NNS |
denotes |
differences |
T11055 |
1242-1249 |
IN |
denotes |
between |
T11056 |
1250-1253 |
DT |
denotes |
the |
T11057 |
1258-1265 |
NNS |
denotes |
strains |
T11058 |
1254-1257 |
CD |
denotes |
two |
T11059 |
1266-1268 |
IN |
denotes |
at |
T11060 |
1269-1272 |
DT |
denotes |
the |
T11061 |
1276-1281 |
NN |
denotes |
phase |
T11062 |
1273-1275 |
NN |
denotes |
NC |
T11063 |
1281-1282 |
. |
denotes |
. |
T11064 |
1282-1394 |
sentence |
denotes |
Five genes were differentially expressed at all phases of CIA, including H2-Q10, Mapk14, Pscd1, Kpnb1 and Wdr1. |
T11065 |
1283-1287 |
CD |
denotes |
Five |
T11066 |
1288-1293 |
NNS |
denotes |
genes |
T11067 |
1314-1323 |
VBN |
denotes |
expressed |
T11068 |
1294-1298 |
VBD |
denotes |
were |
T11069 |
1299-1313 |
RB |
denotes |
differentially |
T11070 |
1324-1326 |
IN |
denotes |
at |
T11071 |
1327-1330 |
DT |
denotes |
all |
T11072 |
1331-1337 |
NNS |
denotes |
phases |
T11073 |
1338-1340 |
IN |
denotes |
of |
T11074 |
1341-1344 |
NN |
denotes |
CIA |
T11075 |
1344-1346 |
, |
denotes |
, |
T11076 |
1346-1355 |
VBG |
denotes |
including |
T11077 |
1356-1358 |
NN |
denotes |
H2 |
T11078 |
1359-1362 |
NN |
denotes |
Q10 |
T11079 |
1358-1359 |
HYPH |
denotes |
- |
T11080 |
1362-1364 |
, |
denotes |
, |
T11081 |
1364-1370 |
NN |
denotes |
Mapk14 |
T11082 |
1370-1372 |
, |
denotes |
, |
T11083 |
1372-1377 |
NN |
denotes |
Pscd1 |
T11084 |
1377-1379 |
, |
denotes |
, |
T11085 |
1379-1384 |
NN |
denotes |
Kpnb1 |
T11086 |
1385-1388 |
CC |
denotes |
and |
T11087 |
1389-1393 |
NN |
denotes |
Wdr1 |
T11088 |
1393-1394 |
. |
denotes |
. |
T11089 |
1394-1678 |
sentence |
denotes |
Among these five genes, H2-Q10 had a consistently higher expression in the DBA/1 than the FVB/N strain in all CIA phases, while the other four genes had a higher expression in the DBA/1 strain at the early stages, including NC, PI and OA, but a lower expression at the chronic phase. |
T11090 |
1395-1400 |
IN |
denotes |
Among |
T11091 |
1426-1429 |
VBD |
denotes |
had |
T11092 |
1401-1406 |
DT |
denotes |
these |
T11093 |
1412-1417 |
NNS |
denotes |
genes |
T11094 |
1407-1411 |
CD |
denotes |
five |
T11095 |
1417-1419 |
, |
denotes |
, |
T11096 |
1419-1421 |
NN |
denotes |
H2 |
T11097 |
1422-1425 |
NN |
denotes |
Q10 |
T11098 |
1421-1422 |
HYPH |
denotes |
- |
T11099 |
1430-1431 |
DT |
denotes |
a |
T11100 |
1452-1462 |
NN |
denotes |
expression |
T11101 |
1432-1444 |
RB |
denotes |
consistently |
T11102 |
1445-1451 |
JJR |
denotes |
higher |
T11103 |
1463-1465 |
IN |
denotes |
in |
T11104 |
1466-1469 |
DT |
denotes |
the |
T11105 |
1470-1473 |
NN |
denotes |
DBA |
T11106 |
1473-1474 |
HYPH |
denotes |
/ |
T11107 |
1474-1475 |
CD |
denotes |
1 |
T11108 |
1476-1480 |
IN |
denotes |
than |
T11109 |
1481-1484 |
DT |
denotes |
the |
T11110 |
1491-1497 |
NN |
denotes |
strain |
T11111 |
1485-1488 |
NN |
denotes |
FVB |
T11112 |
1489-1490 |
NN |
denotes |
N |
T11113 |
1488-1489 |
HYPH |
denotes |
/ |
T11114 |
1498-1500 |
IN |
denotes |
in |
T11115 |
1501-1504 |
DT |
denotes |
all |
T11116 |
1509-1515 |
NNS |
denotes |
phases |
T11117 |
1505-1508 |
NN |
denotes |
CIA |
T11118 |
1515-1517 |
, |
denotes |
, |
T11119 |
1517-1522 |
IN |
denotes |
while |
T11120 |
1544-1547 |
VBD |
denotes |
had |
T11121 |
1523-1526 |
DT |
denotes |
the |
T11122 |
1538-1543 |
NNS |
denotes |
genes |
T11123 |
1527-1532 |
JJ |
denotes |
other |
T11124 |
1533-1537 |
CD |
denotes |
four |
T11125 |
1548-1549 |
DT |
denotes |
a |
T11126 |
1557-1567 |
NN |
denotes |
expression |
T11127 |
1550-1556 |
JJR |
denotes |
higher |
T11128 |
1568-1570 |
IN |
denotes |
in |
T11129 |
1571-1574 |
DT |
denotes |
the |
T11130 |
1581-1587 |
NN |
denotes |
strain |
T11131 |
1575-1578 |
NN |
denotes |
DBA |
T11132 |
1578-1579 |
HYPH |
denotes |
/ |
T11133 |
1579-1580 |
CD |
denotes |
1 |
T11134 |
1588-1590 |
IN |
denotes |
at |
T11135 |
1591-1594 |
DT |
denotes |
the |
T11136 |
1601-1607 |
NNS |
denotes |
stages |
T11137 |
1595-1600 |
JJ |
denotes |
early |
T11138 |
1607-1609 |
, |
denotes |
, |
T11139 |
1609-1618 |
VBG |
denotes |
including |
T11140 |
1619-1621 |
NN |
denotes |
NC |
T11141 |
1621-1623 |
, |
denotes |
, |
T11142 |
1623-1625 |
NN |
denotes |
PI |
T11143 |
1626-1629 |
CC |
denotes |
and |
T11144 |
1630-1632 |
NN |
denotes |
OA |
T11145 |
1632-1634 |
, |
denotes |
, |
T11146 |
1634-1637 |
CC |
denotes |
but |
T11147 |
1638-1639 |
DT |
denotes |
a |
T11148 |
1646-1656 |
NN |
denotes |
expression |
T11149 |
1640-1645 |
JJR |
denotes |
lower |
T11150 |
1657-1659 |
IN |
denotes |
at |
T11151 |
1660-1663 |
DT |
denotes |
the |
T11152 |
1672-1677 |
NN |
denotes |
phase |
T11153 |
1664-1671 |
JJ |
denotes |
chronic |
T11154 |
1677-1678 |
. |
denotes |
. |
T11155 |
1678-1827 |
sentence |
denotes |
GO term classification analysis revealed that the functional cluster of protein kinase cascade was significantly enriched in the 21 candidate genes. |
T11156 |
1679-1681 |
NN |
denotes |
GO |
T11157 |
1702-1710 |
NN |
denotes |
analysis |
T11158 |
1682-1686 |
NN |
denotes |
term |
T11159 |
1687-1701 |
NN |
denotes |
classification |
T11160 |
1711-1719 |
VBD |
denotes |
revealed |
T11161 |
1720-1724 |
IN |
denotes |
that |
T11162 |
1792-1800 |
VBN |
denotes |
enriched |
T11163 |
1725-1728 |
DT |
denotes |
the |
T11164 |
1740-1747 |
NN |
denotes |
cluster |
T11165 |
1729-1739 |
JJ |
denotes |
functional |
T11166 |
1748-1750 |
IN |
denotes |
of |
T11167 |
1751-1758 |
NN |
denotes |
protein |
T11168 |
1766-1773 |
NN |
denotes |
cascade |
T11169 |
1759-1765 |
NN |
denotes |
kinase |
T11170 |
1774-1777 |
VBD |
denotes |
was |
T11171 |
1778-1791 |
RB |
denotes |
significantly |
T11172 |
1801-1803 |
IN |
denotes |
in |
T11173 |
1804-1807 |
DT |
denotes |
the |
T11174 |
1821-1826 |
NNS |
denotes |
genes |
T11175 |
1808-1810 |
CD |
denotes |
21 |
T11176 |
1811-1820 |
NN |
denotes |
candidate |
T11177 |
1826-1827 |
. |
denotes |
. |
T11178 |
1827-1919 |
sentence |
denotes |
This functional cluster contained four genes, including Mapk14, Mapk8ip3, Stat5a and Gna12. |
T11179 |
1828-1832 |
DT |
denotes |
This |
T11180 |
1844-1851 |
NN |
denotes |
cluster |
T11181 |
1833-1843 |
JJ |
denotes |
functional |
T11182 |
1852-1861 |
VBD |
denotes |
contained |
T11183 |
1862-1866 |
CD |
denotes |
four |
T11184 |
1867-1872 |
NNS |
denotes |
genes |
T11185 |
1872-1874 |
, |
denotes |
, |
T11186 |
1874-1883 |
VBG |
denotes |
including |
T11187 |
1884-1890 |
NN |
denotes |
Mapk14 |
T11188 |
1890-1892 |
, |
denotes |
, |
T11189 |
1892-1900 |
NN |
denotes |
Mapk8ip3 |
T11190 |
1900-1902 |
, |
denotes |
, |
T11191 |
1902-1908 |
NN |
denotes |
Stat5a |
T11192 |
1909-1912 |
CC |
denotes |
and |
T11193 |
1913-1918 |
NN |
denotes |
Gna12 |
T11194 |
1918-1919 |
. |
denotes |
. |
R3127 |
T10781 |
T10782 |
compound |
Candidate,genes |
R3128 |
T10783 |
T10782 |
prep |
for,genes |
R3129 |
T10784 |
T10785 |
det |
the,QTL |
R3130 |
T10785 |
T10783 |
pobj |
QTL,for |
R3131 |
T10786 |
T10787 |
amod |
small,effect |
R3132 |
T10787 |
T10785 |
compound |
effect,QTL |
R3133 |
T10788 |
T10787 |
punct |
-,effect |
R3134 |
T10789 |
T10785 |
prep |
of,QTL |
R3135 |
T10790 |
T10789 |
pobj |
CIA,of |
R3136 |
T10792 |
T10793 |
aux |
To,identify |
R3137 |
T10793 |
T10794 |
advcl |
identify,compared |
R3138 |
T10794 |
T10807 |
ccomp |
compared,shared |
R3139 |
T10795 |
T10796 |
compound |
candidate,genes |
R3140 |
T10796 |
T10793 |
dobj |
genes,identify |
R3141 |
T10797 |
T10796 |
compound |
susceptibility,genes |
R3142 |
T10798 |
T10796 |
prep |
for,genes |
R3143 |
T10799 |
T10800 |
det |
the,QTL |
R3144 |
T10800 |
T10798 |
pobj |
QTL,for |
R3145 |
T10801 |
T10800 |
nmod |
CIA,QTL |
R3146 |
T10802 |
T10803 |
amod |
small,effect |
R3147 |
T10803 |
T10800 |
compound |
effect,QTL |
R3148 |
T10804 |
T10803 |
punct |
-,effect |
R3149 |
T10805 |
T10794 |
punct |
", ",compared |
R3150 |
T10806 |
T10794 |
nsubj |
we,compared |
R3151 |
T10808 |
T10809 |
det |
the,list |
R3152 |
T10809 |
T10794 |
dobj |
list,compared |
R3153 |
T10810 |
T10809 |
prep |
of,list |
R3154 |
T10811 |
T10812 |
npadvmod |
strain,specific |
R3155 |
T10812 |
T10814 |
amod |
specific,genes |
R3156 |
T10813 |
T10812 |
punct |
-,specific |
R3157 |
T10814 |
T10810 |
pobj |
genes,of |
R3158 |
T10815 |
T10816 |
advmod |
differentially,expressed |
R3159 |
T10816 |
T10814 |
amod |
expressed,genes |
R3160 |
T10817 |
T10794 |
prep |
with,compared |
R3161 |
T10818 |
T10819 |
det |
the,list |
R3162 |
T10819 |
T10817 |
pobj |
list,with |
R3163 |
T10820 |
T10819 |
prep |
of,list |
R3164 |
T10821 |
T10822 |
npadvmod |
disease,specific |
R3165 |
T10822 |
T10824 |
amod |
specific,genes |
R3166 |
T10823 |
T10822 |
punct |
-,specific |
R3167 |
T10824 |
T10820 |
pobj |
genes,of |
R3168 |
T10825 |
T10826 |
advmod |
differentially,expressed |
R3169 |
T10826 |
T10824 |
amod |
expressed,genes |
R3170 |
T10827 |
T10807 |
punct |
;,shared |
R3171 |
T10828 |
T10829 |
nummod |
117,genes |
R3172 |
T10829 |
T10807 |
nsubjpass |
genes,shared |
R3173 |
T10830 |
T10807 |
auxpass |
were,shared |
R3174 |
T10831 |
T10807 |
agent |
by,shared |
R3175 |
T10832 |
T10833 |
det |
both,lists |
R3176 |
T10833 |
T10831 |
pobj |
lists,by |
R3177 |
T10834 |
T10835 |
punct |
(,file |
R3178 |
T10835 |
T10807 |
parataxis |
file,shared |
R3179 |
T10836 |
T10835 |
amod |
Additional,file |
R3180 |
T10837 |
T10835 |
nummod |
3,file |
R3181 |
T10838 |
T10835 |
punct |
),file |
R3182 |
T10839 |
T10807 |
punct |
.,shared |
R3183 |
T10841 |
T10842 |
nsubj |
Figure,visualises |
R3184 |
T10843 |
T10841 |
nummod |
3,Figure |
R3185 |
T10844 |
T10842 |
dobj |
positions,visualises |
R3186 |
T10845 |
T10844 |
prep |
of,positions |
R3187 |
T10846 |
T10847 |
det |
the,genes |
R3188 |
T10847 |
T10845 |
pobj |
genes,of |
R3189 |
T10848 |
T10847 |
nummod |
117,genes |
R3190 |
T10849 |
T10847 |
acl |
retrieved,genes |
R3191 |
T10850 |
T10849 |
prep |
from,retrieved |
R3192 |
T10851 |
T10850 |
pobj |
Ensembl,from |
R3193 |
T10852 |
T10853 |
punct |
[,30 |
R3194 |
T10853 |
T10849 |
parataxis |
30,retrieved |
R3195 |
T10854 |
T10853 |
punct |
],30 |
R3196 |
T10855 |
T10842 |
prep |
in,visualises |
R3197 |
T10856 |
T10855 |
pobj |
relation,in |
R3198 |
T10857 |
T10856 |
prep |
to,relation |
R3199 |
T10858 |
T10859 |
det |
the,QTL |
R3201 |
T10860 |
T10859 |
nummod |
8,QTL |
R3202 |
T10861 |
T10862 |
amod |
small,effect |
R3203 |
T10862 |
T10859 |
compound |
effect,QTL |
R3204 |
T10863 |
T10862 |
punct |
-,effect |
R3205 |
T10864 |
T10842 |
punct |
.,visualises |
R3206 |
T10866 |
T10867 |
det |
The,loci |
R3207 |
T10867 |
T10869 |
nsubjpass |
loci,located |
R3208 |
T10868 |
T10867 |
nummod |
eight,loci |
R3209 |
T10870 |
T10869 |
auxpass |
were,located |
R3210 |
T10871 |
T10869 |
prep |
on,located |
R3211 |
T10872 |
T10873 |
nummod |
7,chromosomes |
R3212 |
T10873 |
T10871 |
pobj |
chromosomes,on |
R3213 |
T10874 |
T10873 |
punct |
", ",chromosomes |
R3214 |
T10875 |
T10873 |
appos |
5,chromosomes |
R3215 |
T10876 |
T10875 |
punct |
", ",5 |
R3216 |
T10877 |
T10875 |
conj |
6,5 |
R3217 |
T10878 |
T10877 |
punct |
", ",6 |
R3218 |
T10879 |
T10877 |
conj |
7,6 |
R3219 |
T10880 |
T10879 |
punct |
", ",7 |
R3220 |
T10881 |
T10879 |
conj |
10,7 |
R3221 |
T10882 |
T10881 |
punct |
", ",10 |
R3222 |
T10883 |
T10881 |
conj |
11,10 |
R3223 |
T10884 |
T10883 |
punct |
", ",11 |
R3224 |
T10885 |
T10883 |
conj |
16,11 |
R3225 |
T10886 |
T10885 |
cc |
and,16 |
R3226 |
T10887 |
T10885 |
conj |
17,16 |
R3227 |
T10888 |
T10869 |
punct |
.,located |
R3228 |
T10890 |
T10891 |
mark |
Since,are |
R3229 |
T10891 |
T10900 |
advcl |
are,used |
R3230 |
T10892 |
T10893 |
det |
the,intervals |
R3231 |
T10893 |
T10891 |
nsubj |
intervals,are |
R3232 |
T10894 |
T10893 |
compound |
confidence,intervals |
R3233 |
T10895 |
T10893 |
prep |
of,intervals |
R3234 |
T10896 |
T10895 |
pobj |
QTL,of |
R3235 |
T10897 |
T10893 |
prep |
in,intervals |
R3236 |
T10898 |
T10899 |
compound |
F2,progeny |
R3237 |
T10899 |
T10897 |
pobj |
progeny,in |
R3238 |
T10901 |
T10902 |
quantmod |
around,20 |
R3239 |
T10902 |
T10903 |
nummod |
20,cM |
R3240 |
T10903 |
T10891 |
attr |
cM,are |
R3241 |
T10904 |
T10905 |
punct |
[,26 |
R3242 |
T10905 |
T10891 |
parataxis |
26,are |
R3243 |
T10906 |
T10905 |
punct |
],26 |
R3244 |
T10907 |
T10900 |
punct |
", ",used |
R3245 |
T10908 |
T10900 |
nsubj |
we,used |
R3246 |
T10909 |
T10910 |
nummod |
40,Mb |
R3247 |
T10910 |
T10900 |
dobj |
Mb,used |
R3248 |
T10911 |
T10900 |
prep |
as,used |
R3249 |
T10912 |
T10913 |
det |
the,intervals |
R3250 |
T10913 |
T10911 |
pobj |
intervals,as |
R3251 |
T10914 |
T10913 |
compound |
confidence,intervals |
R3252 |
T10915 |
T10913 |
prep |
for,intervals |
R3253 |
T10916 |
T10917 |
det |
all,loci |
R3254 |
T10917 |
T10915 |
pobj |
loci,for |
R3255 |
T10918 |
T10900 |
punct |
.,used |
R3256 |
T10920 |
T10921 |
compound |
Twenty,one |
R3257 |
T10921 |
T10923 |
nummod |
one,genes |
R3258 |
T10922 |
T10921 |
punct |
-,one |
R3259 |
T10923 |
T10924 |
nsubjpass |
genes,located |
R3260 |
T10925 |
T10924 |
auxpass |
were,located |
R3261 |
T10926 |
T10924 |
prep |
in,located |
R3262 |
T10927 |
T10928 |
det |
the,intervals |
R3263 |
T10928 |
T10926 |
pobj |
intervals,in |
R3264 |
T10929 |
T10928 |
compound |
confidence,intervals |
R3265 |
T10930 |
T10928 |
prep |
of,intervals |
R3266 |
T10931 |
T10932 |
quantmod |
six,eight |
R3267 |
T10932 |
T10935 |
nummod |
eight,QTL |
R3268 |
T10933 |
T10932 |
quantmod |
of,eight |
R3269 |
T10934 |
T10932 |
quantmod |
the,eight |
R3270 |
T10935 |
T10930 |
pobj |
QTL,of |
R3271 |
T10936 |
T10924 |
punct |
.,located |
R3272 |
T10938 |
T10939 |
nsubj |
We,located |
R3273 |
T10940 |
T10941 |
nummod |
5,genes |
R3274 |
T10941 |
T10939 |
dobj |
genes,located |
R3275 |
T10942 |
T10940 |
punct |
", ",5 |
R3276 |
T10943 |
T10940 |
conj |
4,5 |
R3277 |
T10944 |
T10943 |
punct |
", ",4 |
R3278 |
T10945 |
T10943 |
conj |
2,4 |
R3279 |
T10946 |
T10945 |
punct |
", ",2 |
R3280 |
T10947 |
T10945 |
conj |
1,2 |
R3281 |
T10948 |
T10947 |
punct |
", ",1 |
R3282 |
T10949 |
T10947 |
conj |
3,1 |
R3283 |
T10950 |
T10949 |
cc |
and,3 |
R3284 |
T10951 |
T10949 |
conj |
6,3 |
R3285 |
T10952 |
T10941 |
amod |
potential,genes |
R3286 |
T10953 |
T10941 |
compound |
candidate,genes |
R3287 |
T10954 |
T10939 |
prep |
within,located |
R3288 |
T10955 |
T10956 |
det |
the,intervals |
R3289 |
T10956 |
T10954 |
pobj |
intervals,within |
R3290 |
T10957 |
T10956 |
compound |
confidence,intervals |
R3291 |
T10958 |
T10956 |
prep |
of,intervals |
R3292 |
T10959 |
T10960 |
nmod |
loci,1 |
R3293 |
T10960 |
T10958 |
pobj |
1,of |
R3294 |
T10961 |
T10960 |
punct |
", ",1 |
R3295 |
T10962 |
T10960 |
conj |
2,1 |
R3296 |
T10963 |
T10962 |
punct |
", ",2 |
R3297 |
T10964 |
T10962 |
conj |
3,2 |
R3298 |
T10965 |
T10964 |
punct |
", ",3 |
R3299 |
T10966 |
T10964 |
conj |
5,3 |
R3300 |
T10967 |
T10966 |
punct |
", ",5 |
R3301 |
T10968 |
T10966 |
conj |
6,5 |
R3302 |
T10969 |
T10968 |
cc |
and,6 |
R3303 |
T10970 |
T10968 |
conj |
8,6 |
R3304 |
T10971 |
T10939 |
punct |
", ",located |
R3305 |
T10972 |
T10939 |
advmod |
respectively,located |
R3306 |
T10973 |
T10939 |
punct |
", ",located |
R3307 |
T10974 |
T10975 |
mark |
while,identified |
R3309 |
T10976 |
T10977 |
det |
no,gene |
R3310 |
T10977 |
T10975 |
nsubjpass |
gene,identified |
R3311 |
T10978 |
T10977 |
compound |
candidate,gene |
R3312 |
T10979 |
T10975 |
auxpass |
was,identified |
R3313 |
T10980 |
T10975 |
prep |
for,identified |
R3314 |
T10981 |
T10982 |
nmod |
loci,4 |
R3315 |
T10982 |
T10980 |
pobj |
4,for |
R3316 |
T10983 |
T10982 |
cc |
and,4 |
R3317 |
T10984 |
T10982 |
conj |
7,4 |
R3318 |
T10985 |
T10939 |
punct |
.,located |
R3319 |
T10987 |
T10988 |
nsubj |
Table,summarises |
R3320 |
T10989 |
T10987 |
nummod |
3,Table |
R3321 |
T10990 |
T10991 |
det |
the,genes |
R3322 |
T10991 |
T10988 |
dobj |
genes,summarises |
R3323 |
T10992 |
T10991 |
nummod |
21,genes |
R3324 |
T10993 |
T10991 |
compound |
candidate,genes |
R3325 |
T10994 |
T10991 |
acl |
identified,genes |
R3326 |
T10995 |
T10994 |
prep |
in,identified |
R3327 |
T10996 |
T10997 |
det |
this,study |
R3328 |
T10997 |
T10995 |
pobj |
study,in |
R3329 |
T10998 |
T10988 |
punct |
.,summarises |
R3330 |
T11000 |
T11001 |
nummod |
Two,genes |
R3331 |
T11001 |
T11002 |
nsubjpass |
genes,upregulated |
R3332 |
T11003 |
T11001 |
punct |
", ",genes |
R3333 |
T11004 |
T11001 |
appos |
hspa1a,genes |
R3334 |
T11005 |
T11004 |
cc |
and,hspa1a |
R3335 |
T11006 |
T11004 |
conj |
Oas1a,hspa1a |
R3336 |
T11007 |
T11002 |
punct |
", ",upregulated |
R3337 |
T11008 |
T11002 |
auxpass |
were,upregulated |
R3338 |
T11009 |
T11002 |
prep |
at,upregulated |
R3339 |
T11010 |
T11011 |
det |
the,phase |
R3340 |
T11011 |
T11009 |
pobj |
phase,at |
R3341 |
T11012 |
T11011 |
compound |
OA,phase |
R3342 |
T11013 |
T11011 |
prep |
of,phase |
R3343 |
T11014 |
T11013 |
pobj |
CIA,of |
R3344 |
T11015 |
T11002 |
cc |
and,upregulated |
R3345 |
T11016 |
T11017 |
nsubjpass |
Oas1a,upregulated |
R3346 |
T11017 |
T11002 |
conj |
upregulated,upregulated |
R3347 |
T11018 |
T11017 |
auxpass |
was,upregulated |
R3348 |
T11019 |
T11017 |
advmod |
also,upregulated |
R3349 |
T11020 |
T11017 |
prep |
at,upregulated |
R3350 |
T11021 |
T11022 |
det |
the,phase |
R3351 |
T11022 |
T11020 |
pobj |
phase,at |
R3352 |
T11023 |
T11022 |
compound |
PI,phase |
R3353 |
T11024 |
T11017 |
punct |
.,upregulated |
R3354 |
T11026 |
T11027 |
prep |
Except,downregulated |
R3355 |
T11028 |
T11026 |
prep |
for,Except |
R3356 |
T11029 |
T11030 |
det |
these,genes |
R3357 |
T11030 |
T11028 |
pobj |
genes,for |
R3358 |
T11031 |
T11030 |
nummod |
two,genes |
R3359 |
T11032 |
T11027 |
punct |
", ",downregulated |
R3360 |
T11033 |
T11034 |
det |
all,genes |
R3361 |
T11034 |
T11027 |
nsubjpass |
genes,downregulated |
R3362 |
T11035 |
T11034 |
amod |
other,genes |
R3363 |
T11036 |
T11034 |
nummod |
19,genes |
R3364 |
T11037 |
T11027 |
auxpass |
were,downregulated |
R3365 |
T11038 |
T11027 |
prep |
at,downregulated |
R3366 |
T11039 |
T11040 |
det |
the,phase |
R3367 |
T11040 |
T11038 |
pobj |
phase,at |
R3368 |
T11041 |
T11040 |
amod |
chronic,phase |
R3369 |
T11042 |
T11040 |
prep |
of,phase |
R3370 |
T11043 |
T11042 |
pobj |
CIA,of |
R3371 |
T11044 |
T11027 |
punct |
.,downregulated |
R3372 |
T11046 |
T11047 |
det |
All,genes |
R3373 |
T11047 |
T11048 |
nsubj |
genes,showed |
R3374 |
T11049 |
T11047 |
punct |
", ",genes |
R3375 |
T11050 |
T11047 |
prep |
except,genes |
R3376 |
T11051 |
T11050 |
pobj |
hspa1a,except |
R3377 |
T11052 |
T11048 |
punct |
", ",showed |
R3378 |
T11053 |
T11054 |
compound |
expression,differences |
R3379 |
T11054 |
T11048 |
dobj |
differences,showed |
R3380 |
T11055 |
T11054 |
prep |
between,differences |
R3381 |
T11056 |
T11057 |
det |
the,strains |
R3382 |
T11057 |
T11055 |
pobj |
strains,between |
R3383 |
T11058 |
T11057 |
nummod |
two,strains |
R3384 |
T11059 |
T11048 |
prep |
at,showed |
R3385 |
T11060 |
T11061 |
det |
the,phase |
R3386 |
T11061 |
T11059 |
pobj |
phase,at |
R3387 |
T11062 |
T11061 |
compound |
NC,phase |
R3388 |
T11063 |
T11048 |
punct |
.,showed |
R3389 |
T11065 |
T11066 |
nummod |
Five,genes |
R3390 |
T11066 |
T11067 |
nsubjpass |
genes,expressed |
R3391 |
T11068 |
T11067 |
auxpass |
were,expressed |
R3392 |
T11069 |
T11067 |
advmod |
differentially,expressed |
R3393 |
T11070 |
T11067 |
prep |
at,expressed |
R3394 |
T11071 |
T11072 |
det |
all,phases |
R3395 |
T11072 |
T11070 |
pobj |
phases,at |
R3396 |
T11073 |
T11072 |
prep |
of,phases |
R3397 |
T11074 |
T11073 |
pobj |
CIA,of |
R3398 |
T11075 |
T11067 |
punct |
", ",expressed |
R3399 |
T11076 |
T11067 |
prep |
including,expressed |
R3400 |
T11077 |
T11078 |
compound |
H2,Q10 |
R3401 |
T11078 |
T11076 |
pobj |
Q10,including |
R3402 |
T11079 |
T11078 |
punct |
-,Q10 |
R3403 |
T11080 |
T11078 |
punct |
", ",Q10 |
R3404 |
T11081 |
T11078 |
conj |
Mapk14,Q10 |
R3405 |
T11082 |
T11081 |
punct |
", ",Mapk14 |
R3406 |
T11083 |
T11081 |
conj |
Pscd1,Mapk14 |
R3407 |
T11084 |
T11083 |
punct |
", ",Pscd1 |
R3408 |
T11085 |
T11083 |
conj |
Kpnb1,Pscd1 |
R3409 |
T11086 |
T11085 |
cc |
and,Kpnb1 |
R3410 |
T11087 |
T11085 |
conj |
Wdr1,Kpnb1 |
R3411 |
T11088 |
T11067 |
punct |
.,expressed |
R3412 |
T11090 |
T11091 |
prep |
Among,had |
R3413 |
T11092 |
T11093 |
det |
these,genes |
R3414 |
T11093 |
T11090 |
pobj |
genes,Among |
R3415 |
T11094 |
T11093 |
nummod |
five,genes |
R3416 |
T11095 |
T11091 |
punct |
", ",had |
R3417 |
T11096 |
T11097 |
compound |
H2,Q10 |
R3418 |
T11097 |
T11091 |
nsubj |
Q10,had |
R3419 |
T11098 |
T11097 |
punct |
-,Q10 |
R3420 |
T11099 |
T11100 |
det |
a,expression |
R3421 |
T11100 |
T11091 |
dobj |
expression,had |
R3422 |
T11101 |
T11102 |
advmod |
consistently,higher |
R3423 |
T11102 |
T11100 |
amod |
higher,expression |
R3424 |
T11103 |
T11091 |
prep |
in,had |
R3425 |
T11104 |
T11105 |
det |
the,DBA |
R3426 |
T11105 |
T11103 |
pobj |
DBA,in |
R3427 |
T11106 |
T11105 |
punct |
/,DBA |
R3428 |
T11107 |
T11105 |
nummod |
1,DBA |
R3429 |
T11108 |
T11091 |
prep |
than,had |
R3430 |
T11109 |
T11110 |
det |
the,strain |
R3431 |
T11110 |
T11108 |
pobj |
strain,than |
R3432 |
T11111 |
T11112 |
compound |
FVB,N |
R3433 |
T11112 |
T11110 |
compound |
N,strain |
R3434 |
T11113 |
T11112 |
punct |
/,N |
R3435 |
T11114 |
T11091 |
prep |
in,had |
R3436 |
T11115 |
T11116 |
det |
all,phases |
R3437 |
T11116 |
T11114 |
pobj |
phases,in |
R3438 |
T11117 |
T11116 |
compound |
CIA,phases |
R3439 |
T11118 |
T11091 |
punct |
", ",had |
R3440 |
T11119 |
T11120 |
mark |
while,had |
R3442 |
T11121 |
T11122 |
det |
the,genes |
R3443 |
T11122 |
T11120 |
nsubj |
genes,had |
R3444 |
T11123 |
T11122 |
amod |
other,genes |
R3445 |
T11124 |
T11122 |
nummod |
four,genes |
R3446 |
T11125 |
T11126 |
det |
a,expression |
R3447 |
T11126 |
T11120 |
dobj |
expression,had |
R3448 |
T11127 |
T11126 |
amod |
higher,expression |
R3449 |
T11128 |
T11120 |
prep |
in,had |
R3450 |
T11129 |
T11130 |
det |
the,strain |
R3451 |
T11130 |
T11128 |
pobj |
strain,in |
R3452 |
T11131 |
T11130 |
nmod |
DBA,strain |
R3453 |
T11132 |
T11131 |
punct |
/,DBA |
R3454 |
T11133 |
T11131 |
nummod |
1,DBA |
R3455 |
T11134 |
T11120 |
prep |
at,had |
R3456 |
T11135 |
T11136 |
det |
the,stages |
R3457 |
T11136 |
T11134 |
pobj |
stages,at |
R3458 |
T11137 |
T11136 |
amod |
early,stages |
R3459 |
T11138 |
T11120 |
punct |
", ",had |
R3460 |
T11139 |
T11120 |
prep |
including,had |
R3461 |
T11140 |
T11139 |
pobj |
NC,including |
R3462 |
T11141 |
T11140 |
punct |
", ",NC |
R3463 |
T11142 |
T11140 |
conj |
PI,NC |
R3464 |
T11143 |
T11142 |
cc |
and,PI |
R3465 |
T11144 |
T11142 |
conj |
OA,PI |
R3466 |
T11145 |
T11120 |
punct |
", ",had |
R3467 |
T11146 |
T11120 |
cc |
but,had |
R3468 |
T11147 |
T11148 |
det |
a,expression |
R3469 |
T11148 |
T11120 |
conj |
expression,had |
R3470 |
T11149 |
T11148 |
amod |
lower,expression |
R3471 |
T11150 |
T11148 |
prep |
at,expression |
R3472 |
T11151 |
T11152 |
det |
the,phase |
R3473 |
T11152 |
T11150 |
pobj |
phase,at |
R3474 |
T11153 |
T11152 |
amod |
chronic,phase |
R3475 |
T11154 |
T11091 |
punct |
.,had |
R3476 |
T11156 |
T11157 |
compound |
GO,analysis |
R3477 |
T11157 |
T11160 |
nsubj |
analysis,revealed |
R3478 |
T11158 |
T11157 |
compound |
term,analysis |
R3479 |
T11159 |
T11157 |
compound |
classification,analysis |
R3480 |
T11161 |
T11162 |
mark |
that,enriched |
R3481 |
T11162 |
T11160 |
ccomp |
enriched,revealed |
R3482 |
T11163 |
T11164 |
det |
the,cluster |
R3483 |
T11164 |
T11162 |
nsubjpass |
cluster,enriched |
R3484 |
T11165 |
T11164 |
amod |
functional,cluster |
R3485 |
T11166 |
T11164 |
prep |
of,cluster |
R3486 |
T11167 |
T11168 |
compound |
protein,cascade |
R3487 |
T11168 |
T11166 |
pobj |
cascade,of |
R3488 |
T11169 |
T11168 |
compound |
kinase,cascade |
R3489 |
T11170 |
T11162 |
auxpass |
was,enriched |
R3490 |
T11171 |
T11162 |
advmod |
significantly,enriched |
R3491 |
T11172 |
T11162 |
prep |
in,enriched |
R3492 |
T11173 |
T11174 |
det |
the,genes |
R3493 |
T11174 |
T11172 |
pobj |
genes,in |
R3494 |
T11175 |
T11174 |
nummod |
21,genes |
R3495 |
T11176 |
T11174 |
compound |
candidate,genes |
R3496 |
T11177 |
T11160 |
punct |
.,revealed |
R3497 |
T11179 |
T11180 |
det |
This,cluster |
R3498 |
T11180 |
T11182 |
nsubj |
cluster,contained |
R3499 |
T11181 |
T11180 |
amod |
functional,cluster |
R3500 |
T11183 |
T11184 |
nummod |
four,genes |
R3501 |
T11184 |
T11182 |
dobj |
genes,contained |
R3502 |
T11185 |
T11184 |
punct |
", ",genes |
R3503 |
T11186 |
T11184 |
prep |
including,genes |
R3504 |
T11187 |
T11186 |
pobj |
Mapk14,including |
R3505 |
T11188 |
T11187 |
punct |
", ",Mapk14 |
R3506 |
T11189 |
T11187 |
conj |
Mapk8ip3,Mapk14 |
R3507 |
T11190 |
T11189 |
punct |
", ",Mapk8ip3 |
R3508 |
T11191 |
T11189 |
conj |
Stat5a,Mapk8ip3 |
R3509 |
T11192 |
T11191 |
cc |
and,Stat5a |
R3510 |
T11193 |
T11191 |
conj |
Gna12,Stat5a |
R3511 |
T11194 |
T11182 |
punct |
.,contained |
R3200 |
T10859 |
T10857 |
pobj |
QTL,to |
R3308 |
T10975 |
T10939 |
advcl |
identified,located |
R3441 |
T11120 |
T11091 |
advcl |
had,had |