PMC:1860061 / 15997-16091 JSON TXT

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Id	Subject	Object	Predicate	Lexical cue
T9790	0-94	sentence	denotes	Cluster I contains 16 genes, representing genes that were upregulated after induction of CIA.
T9791	1-8	NN	denotes	Cluster
T9792	11-19	VBZ	denotes	contains
T9793	9-10	CD	denotes	I
T9794	20-22	CD	denotes	16
T9795	23-28	NNS	denotes	genes
T9796	28-30	,	denotes	,
T9797	30-42	VBG	denotes	representing
T9798	43-48	NNS	denotes	genes
T9799	49-53	WDT	denotes	that
T9800	59-70	VBN	denotes	upregulated
T9801	54-58	VBD	denotes	were
T9802	71-76	IN	denotes	after
T9803	77-86	NN	denotes	induction
T9804	87-89	IN	denotes	of
T9805	90-93	NN	denotes	CIA
T9806	93-94	.	denotes	.
R2943	T9791	T9792	nsubj	Cluster,contains
R2944	T9793	T9791	nummod	I,Cluster
R2945	T9794	T9795	nummod	16,genes
R2946	T9795	T9792	dobj	genes,contains
R2947	T9796	T9795	punct	", ",genes
R2948	T9797	T9795	acl	representing,genes
R2949	T9798	T9797	dobj	genes,representing
R2950	T9799	T9800	dep	that,upregulated
R2951	T9800	T9798	relcl	upregulated,genes
R2952	T9801	T9800	auxpass	were,upregulated
R2953	T9802	T9800	prep	after,upregulated
R2954	T9803	T9802	pobj	induction,after
R2955	T9804	T9803	prep	of,induction
R2956	T9805	T9804	pobj	CIA,of
R2957	T9806	T9792	punct	.,contains

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id	Subject	Object	Predicate	Lexical cue
T9511	23-28	SO_EXT:0000704	denotes	genes
T9512	43-48	SO_EXT:0000704	denotes	genes
T9513	59-70	GO_EXT:positive_regulation	denotes	upregulated

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id	Subject	Object	Predicate	Lexical cue
T9451	23-28	SO:0000704	denotes	genes
T9452	43-48	SO:0000704	denotes	genes