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PMC:1858683 / 81-419 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T954 0-10 sentence denotes Background
T955 0-10 NN denotes Background
T956 10-158 sentence denotes The pygopus gene of Drosophila encodes an essential component of the Armadillo (β-catenin) transcription factor complex of canonical Wnt signaling.
T957 11-14 DT denotes The
T958 23-27 NN denotes gene
T959 15-22 NN denotes pygopus
T960 42-49 VBZ denotes encodes
T961 28-30 IN denotes of
T962 31-41 NNP denotes Drosophila
T963 50-52 DT denotes an
T964 63-72 NN denotes component
T965 53-62 JJ denotes essential
T966 73-75 IN denotes of
T967 76-79 DT denotes the
T968 123-130 NN denotes complex
T969 80-89 NN denotes Armadillo
T970 116-122 NN denotes factor
T971 90-91 -LRB- denotes (
T972 93-100 NN denotes catenin
T973 91-92 NN denotes β
T974 92-93 HYPH denotes -
T975 100-101 -RRB- denotes )
T976 102-115 NN denotes transcription
T977 131-133 IN denotes of
T978 134-143 JJ denotes canonical
T979 148-157 NN denotes signaling
T980 144-147 NN denotes Wnt
T981 157-158 . denotes .
T982 158-338 sentence denotes To better understand the functions of Pygopus-mediated canonical Wnt signaling in kidney development, targeted mutations were made in the two mammalian orthologs, Pygo1 and Pygo2.
T983 159-161 TO denotes To
T984 169-179 VB denotes understand
T985 162-168 RBR denotes better
T986 285-289 VBN denotes made
T987 180-183 DT denotes the
T988 184-193 NNS denotes functions
T989 194-196 IN denotes of
T990 197-204 NN denotes Pygopus
T991 205-213 VBN denotes mediated
T992 204-205 HYPH denotes -
T993 228-237 NN denotes signaling
T994 214-223 JJ denotes canonical
T995 224-227 NN denotes Wnt
T996 238-240 IN denotes in
T997 241-247 NN denotes kidney
T998 248-259 NN denotes development
T999 259-261 , denotes ,
T1000 261-269 VBN denotes targeted
T1001 270-279 NNS denotes mutations
T1002 280-284 VBD denotes were
T1003 290-292 IN denotes in
T1004 293-296 DT denotes the
T1005 311-320 NNS denotes orthologs
T1006 297-300 CD denotes two
T1007 301-310 JJ denotes mammalian
T1008 320-322 , denotes ,
T1009 322-327 NN denotes Pygo1
T1010 328-331 CC denotes and
T1011 332-337 NN denotes Pygo2
T1012 337-338 . denotes .
R14 T957 T958 det The,gene
R15 T958 T960 nsubj gene,encodes
R16 T959 T958 compound pygopus,gene
R17 T961 T958 prep of,gene
R18 T962 T961 pobj Drosophila,of
R19 T963 T964 det an,component
R20 T964 T960 dobj component,encodes
R21 T965 T964 amod essential,component
R22 T966 T964 prep of,component
R23 T967 T968 det the,complex
R24 T968 T966 pobj complex,of
R25 T969 T970 nmod Armadillo,factor
R26 T970 T968 compound factor,complex
R27 T971 T972 punct (,catenin
R28 T972 T969 parataxis catenin,Armadillo
R29 T973 T972 compound β,catenin
R30 T974 T972 punct -,catenin
R31 T975 T972 punct ),catenin
R32 T976 T970 compound transcription,factor
R33 T977 T968 prep of,complex
R34 T978 T979 amod canonical,signaling
R35 T979 T977 pobj signaling,of
R36 T980 T979 compound Wnt,signaling
R37 T981 T960 punct .,encodes
R38 T983 T984 aux To,understand
R39 T984 T986 advcl understand,made
R40 T985 T984 advmod better,understand
R41 T987 T988 det the,functions
R42 T988 T984 dobj functions,understand
R43 T989 T988 prep of,functions
R44 T990 T991 npadvmod Pygopus,mediated
R45 T991 T993 amod mediated,signaling
R46 T992 T991 punct -,mediated
R47 T993 T989 pobj signaling,of
R48 T994 T993 amod canonical,signaling
R49 T995 T993 compound Wnt,signaling
R50 T996 T988 prep in,functions
R51 T997 T998 compound kidney,development
R52 T998 T996 pobj development,in
R53 T999 T986 punct ", ",made
R54 T1000 T1001 amod targeted,mutations
R55 T1001 T986 nsubjpass mutations,made
R56 T1002 T986 auxpass were,made
R57 T1003 T986 prep in,made
R58 T1004 T1005 det the,orthologs
R59 T1005 T1003 pobj orthologs,in
R60 T1006 T1005 nummod two,orthologs
R61 T1007 T1005 amod mammalian,orthologs
R62 T1008 T1005 punct ", ",orthologs
R63 T1009 T1005 appos Pygo1,orthologs
R64 T1010 T1009 cc and,Pygo1
R65 T1011 T1009 conj Pygo2,Pygo1
R66 T1012 T986 punct .,made

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T841 15-22 PR_EXT:Q9V9W8 denotes pygopus
T842 23-27 SO_EXT:0000704 denotes gene
T843 31-41 NCBITaxon:7215 denotes Drosophila
T844 42-49 SO_EXT:sequence_coding_function denotes encodes
T845 80-89 PR_EXT:P18824 denotes Armadillo
T846 91-100 PR_EXT:000002198 denotes β-catenin
T847 102-115 GO_EXT:transcription denotes transcription
T848 102-122 GO_EXT:transcription_factor denotes transcription factor
T849 102-130 GO:0005667 denotes transcription factor complex
T850 134-157 GO:0060070 denotes canonical Wnt signaling
T851 197-204 PR_EXT:Q9V9W8 denotes Pygopus
T852 214-237 GO:0060070 denotes canonical Wnt signaling
T853 241-247 UBERON:0002113 denotes kidney
T854 241-259 GO:0001822 denotes kidney development
T855 270-279 SO_EXT:sequence_alteration_entity_or_process denotes mutations
T856 301-310 NCBITaxon:40674 denotes mammalian
T857 311-320 SO_EXT:0000855 denotes orthologs
T858 322-327 PR_EXT:000013523 denotes Pygo1
T859 332-337 PR_EXT:000013524 denotes Pygo2

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T760 15-22 PR:Q9V9W8 denotes pygopus
T761 23-27 SO:0000704 denotes gene
T762 31-41 NCBITaxon:7215 denotes Drosophila
T763 80-89 PR:P18824 denotes Armadillo
T764 91-100 PR:000002198 denotes β-catenin
T765 102-130 GO:0005667 denotes transcription factor complex
T766 134-157 GO:0060070 denotes canonical Wnt signaling
T767 197-204 PR:Q9V9W8 denotes Pygopus
T768 214-237 GO:0060070 denotes canonical Wnt signaling
T769 241-247 UBERON:0002113 denotes kidney
T770 241-259 GO:0001822 denotes kidney development
T771 301-310 NCBITaxon:40674 denotes mammalian
T772 311-320 SO:0000855 denotes orthologs
T773 322-327 PR:000013523 denotes Pygo1
T774 332-337 PR:000013524 denotes Pygo2