
PMC:1858683 / 81-419
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T954 | 0-10 | sentence | denotes | Background |
T955 | 0-10 | NN | denotes | Background |
T956 | 10-158 | sentence | denotes | The pygopus gene of Drosophila encodes an essential component of the Armadillo (β-catenin) transcription factor complex of canonical Wnt signaling. |
T957 | 11-14 | DT | denotes | The |
T958 | 23-27 | NN | denotes | gene |
T959 | 15-22 | NN | denotes | pygopus |
T960 | 42-49 | VBZ | denotes | encodes |
T961 | 28-30 | IN | denotes | of |
T962 | 31-41 | NNP | denotes | Drosophila |
T963 | 50-52 | DT | denotes | an |
T964 | 63-72 | NN | denotes | component |
T965 | 53-62 | JJ | denotes | essential |
T966 | 73-75 | IN | denotes | of |
T967 | 76-79 | DT | denotes | the |
T968 | 123-130 | NN | denotes | complex |
T969 | 80-89 | NN | denotes | Armadillo |
T970 | 116-122 | NN | denotes | factor |
T971 | 90-91 | -LRB- | denotes | ( |
T972 | 93-100 | NN | denotes | catenin |
T973 | 91-92 | NN | denotes | β |
T974 | 92-93 | HYPH | denotes | - |
T975 | 100-101 | -RRB- | denotes | ) |
T976 | 102-115 | NN | denotes | transcription |
T977 | 131-133 | IN | denotes | of |
T978 | 134-143 | JJ | denotes | canonical |
T979 | 148-157 | NN | denotes | signaling |
T980 | 144-147 | NN | denotes | Wnt |
T981 | 157-158 | . | denotes | . |
T982 | 158-338 | sentence | denotes | To better understand the functions of Pygopus-mediated canonical Wnt signaling in kidney development, targeted mutations were made in the two mammalian orthologs, Pygo1 and Pygo2. |
T983 | 159-161 | TO | denotes | To |
T984 | 169-179 | VB | denotes | understand |
T985 | 162-168 | RBR | denotes | better |
T986 | 285-289 | VBN | denotes | made |
T987 | 180-183 | DT | denotes | the |
T988 | 184-193 | NNS | denotes | functions |
T989 | 194-196 | IN | denotes | of |
T990 | 197-204 | NN | denotes | Pygopus |
T991 | 205-213 | VBN | denotes | mediated |
T992 | 204-205 | HYPH | denotes | - |
T993 | 228-237 | NN | denotes | signaling |
T994 | 214-223 | JJ | denotes | canonical |
T995 | 224-227 | NN | denotes | Wnt |
T996 | 238-240 | IN | denotes | in |
T997 | 241-247 | NN | denotes | kidney |
T998 | 248-259 | NN | denotes | development |
T999 | 259-261 | , | denotes | , |
T1000 | 261-269 | VBN | denotes | targeted |
T1001 | 270-279 | NNS | denotes | mutations |
T1002 | 280-284 | VBD | denotes | were |
T1003 | 290-292 | IN | denotes | in |
T1004 | 293-296 | DT | denotes | the |
T1005 | 311-320 | NNS | denotes | orthologs |
T1006 | 297-300 | CD | denotes | two |
T1007 | 301-310 | JJ | denotes | mammalian |
T1008 | 320-322 | , | denotes | , |
T1009 | 322-327 | NN | denotes | Pygo1 |
T1010 | 328-331 | CC | denotes | and |
T1011 | 332-337 | NN | denotes | Pygo2 |
T1012 | 337-338 | . | denotes | . |
R14 | T957 | T958 | det | The,gene |
R15 | T958 | T960 | nsubj | gene,encodes |
R16 | T959 | T958 | compound | pygopus,gene |
R17 | T961 | T958 | prep | of,gene |
R18 | T962 | T961 | pobj | Drosophila,of |
R19 | T963 | T964 | det | an,component |
R20 | T964 | T960 | dobj | component,encodes |
R21 | T965 | T964 | amod | essential,component |
R22 | T966 | T964 | prep | of,component |
R23 | T967 | T968 | det | the,complex |
R24 | T968 | T966 | pobj | complex,of |
R25 | T969 | T970 | nmod | Armadillo,factor |
R26 | T970 | T968 | compound | factor,complex |
R27 | T971 | T972 | punct | (,catenin |
R28 | T972 | T969 | parataxis | catenin,Armadillo |
R29 | T973 | T972 | compound | β,catenin |
R30 | T974 | T972 | punct | -,catenin |
R31 | T975 | T972 | punct | ),catenin |
R32 | T976 | T970 | compound | transcription,factor |
R33 | T977 | T968 | prep | of,complex |
R34 | T978 | T979 | amod | canonical,signaling |
R35 | T979 | T977 | pobj | signaling,of |
R36 | T980 | T979 | compound | Wnt,signaling |
R37 | T981 | T960 | punct | .,encodes |
R38 | T983 | T984 | aux | To,understand |
R39 | T984 | T986 | advcl | understand,made |
R40 | T985 | T984 | advmod | better,understand |
R41 | T987 | T988 | det | the,functions |
R42 | T988 | T984 | dobj | functions,understand |
R43 | T989 | T988 | prep | of,functions |
R44 | T990 | T991 | npadvmod | Pygopus,mediated |
R45 | T991 | T993 | amod | mediated,signaling |
R46 | T992 | T991 | punct | -,mediated |
R47 | T993 | T989 | pobj | signaling,of |
R48 | T994 | T993 | amod | canonical,signaling |
R49 | T995 | T993 | compound | Wnt,signaling |
R50 | T996 | T988 | prep | in,functions |
R51 | T997 | T998 | compound | kidney,development |
R52 | T998 | T996 | pobj | development,in |
R53 | T999 | T986 | punct | ", ",made |
R54 | T1000 | T1001 | amod | targeted,mutations |
R55 | T1001 | T986 | nsubjpass | mutations,made |
R56 | T1002 | T986 | auxpass | were,made |
R57 | T1003 | T986 | prep | in,made |
R58 | T1004 | T1005 | det | the,orthologs |
R59 | T1005 | T1003 | pobj | orthologs,in |
R60 | T1006 | T1005 | nummod | two,orthologs |
R61 | T1007 | T1005 | amod | mammalian,orthologs |
R62 | T1008 | T1005 | punct | ", ",orthologs |
R63 | T1009 | T1005 | appos | Pygo1,orthologs |
R64 | T1010 | T1009 | cc | and,Pygo1 |
R65 | T1011 | T1009 | conj | Pygo2,Pygo1 |
R66 | T1012 | T986 | punct | .,made |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T841 | 15-22 | PR_EXT:Q9V9W8 | denotes | pygopus |
T842 | 23-27 | SO_EXT:0000704 | denotes | gene |
T843 | 31-41 | NCBITaxon:7215 | denotes | Drosophila |
T844 | 42-49 | SO_EXT:sequence_coding_function | denotes | encodes |
T845 | 80-89 | PR_EXT:P18824 | denotes | Armadillo |
T846 | 91-100 | PR_EXT:000002198 | denotes | β-catenin |
T847 | 102-115 | GO_EXT:transcription | denotes | transcription |
T848 | 102-122 | GO_EXT:transcription_factor | denotes | transcription factor |
T849 | 102-130 | GO:0005667 | denotes | transcription factor complex |
T850 | 134-157 | GO:0060070 | denotes | canonical Wnt signaling |
T851 | 197-204 | PR_EXT:Q9V9W8 | denotes | Pygopus |
T852 | 214-237 | GO:0060070 | denotes | canonical Wnt signaling |
T853 | 241-247 | UBERON:0002113 | denotes | kidney |
T854 | 241-259 | GO:0001822 | denotes | kidney development |
T855 | 270-279 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutations |
T856 | 301-310 | NCBITaxon:40674 | denotes | mammalian |
T857 | 311-320 | SO_EXT:0000855 | denotes | orthologs |
T858 | 322-327 | PR_EXT:000013523 | denotes | Pygo1 |
T859 | 332-337 | PR_EXT:000013524 | denotes | Pygo2 |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T760 | 15-22 | PR:Q9V9W8 | denotes | pygopus |
T761 | 23-27 | SO:0000704 | denotes | gene |
T762 | 31-41 | NCBITaxon:7215 | denotes | Drosophila |
T763 | 80-89 | PR:P18824 | denotes | Armadillo |
T764 | 91-100 | PR:000002198 | denotes | β-catenin |
T765 | 102-130 | GO:0005667 | denotes | transcription factor complex |
T766 | 134-157 | GO:0060070 | denotes | canonical Wnt signaling |
T767 | 197-204 | PR:Q9V9W8 | denotes | Pygopus |
T768 | 214-237 | GO:0060070 | denotes | canonical Wnt signaling |
T769 | 241-247 | UBERON:0002113 | denotes | kidney |
T770 | 241-259 | GO:0001822 | denotes | kidney development |
T771 | 301-310 | NCBITaxon:40674 | denotes | mammalian |
T772 | 311-320 | SO:0000855 | denotes | orthologs |
T773 | 322-327 | PR:000013523 | denotes | Pygo1 |
T774 | 332-337 | PR:000013524 | denotes | Pygo2 |