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PMC:1858683 / 421-1908 JSONTXT

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Id Subject Object Predicate Lexical cue
T1014 0-7 NNS denotes Results
T1015 7-141 sentence denotes Each mutation deleted >80% of the coding sequence, including the critical PHD domain, and almost certainly resulted in null function.
T1016 8-12 DT denotes Each
T1017 13-21 NN denotes mutation
T1018 115-123 VBD denotes resulted
T1019 22-29 VBD denotes deleted
T1020 30-31 SYM denotes >
T1021 31-33 CD denotes 80
T1022 33-34 NN denotes %
T1023 35-37 IN denotes of
T1024 38-41 DT denotes the
T1025 49-57 NN denotes sequence
T1026 42-48 NN denotes coding
T1027 57-59 , denotes ,
T1028 59-68 VBG denotes including
T1029 69-72 DT denotes the
T1030 86-92 NN denotes domain
T1031 73-81 JJ denotes critical
T1032 82-85 NN denotes PHD
T1033 92-94 , denotes ,
T1034 94-97 CC denotes and
T1035 98-104 RB denotes almost
T1036 105-114 RB denotes certainly
T1037 124-126 IN denotes in
T1038 127-131 JJ denotes null
T1039 132-140 NN denotes function
T1040 140-141 . denotes .
T1041 141-352 sentence denotes Pygo2 homozygous mutants, with rare exception, died shortly after birth, with a phenotype including lens agenesis, growth retardation, altered kidney development, and in some cases exencephaly and cleft palate.
T1042 142-147 NN denotes Pygo2
T1043 148-158 JJ denotes homozygous
T1044 159-166 NNS denotes mutants
T1045 189-193 VBD denotes died
T1046 166-168 , denotes ,
T1047 168-172 IN denotes with
T1048 173-177 JJ denotes rare
T1049 178-187 NN denotes exception
T1050 187-189 , denotes ,
T1051 194-201 RB denotes shortly
T1052 202-207 IN denotes after
T1053 208-213 NN denotes birth
T1054 213-215 , denotes ,
T1055 215-219 IN denotes with
T1056 220-221 DT denotes a
T1057 222-231 NN denotes phenotype
T1058 232-241 VBG denotes including
T1059 242-246 NN denotes lens
T1060 247-255 NN denotes agenesis
T1061 255-257 , denotes ,
T1062 257-263 NN denotes growth
T1063 264-275 NN denotes retardation
T1064 275-277 , denotes ,
T1065 277-284 VBN denotes altered
T1066 292-303 NN denotes development
T1067 285-291 NN denotes kidney
T1068 303-305 , denotes ,
T1069 305-308 CC denotes and
T1070 309-311 IN denotes in
T1071 323-334 NN denotes exencephaly
T1072 312-316 DT denotes some
T1073 317-322 NNS denotes cases
T1074 335-338 CC denotes and
T1075 339-344 VBN denotes cleft
T1076 345-351 NN denotes palate
T1077 351-352 . denotes .
T1078 352-454 sentence denotes Pygo1 homozygous mutants, however, were viable and fertile, with no detectable developmental defects.
T1079 353-358 NN denotes Pygo1
T1080 359-369 JJ denotes homozygous
T1081 370-377 NNS denotes mutants
T1082 388-392 VBD denotes were
T1083 377-379 , denotes ,
T1084 379-386 RB denotes however
T1085 386-388 , denotes ,
T1086 393-399 JJ denotes viable
T1087 400-403 CC denotes and
T1088 404-411 JJ denotes fertile
T1089 411-413 , denotes ,
T1090 413-417 IN denotes with
T1091 418-420 DT denotes no
T1092 446-453 NNS denotes defects
T1093 421-431 JJ denotes detectable
T1094 432-445 JJ denotes developmental
T1095 453-454 . denotes .
T1096 454-542 sentence denotes Double Pygo1/Pygo2 homozygous mutants showed no apparent synergy in phenotype severity.
T1097 455-461 JJ denotes Double
T1098 468-473 NN denotes Pygo2
T1099 462-467 NN denotes Pygo1
T1100 467-468 HYPH denotes /
T1101 474-484 JJ denotes homozygous
T1102 485-492 NNS denotes mutants
T1103 493-499 VBD denotes showed
T1104 500-502 DT denotes no
T1105 512-519 NN denotes synergy
T1106 503-511 JJ denotes apparent
T1107 520-522 IN denotes in
T1108 523-532 NN denotes phenotype
T1109 533-541 NN denotes severity
T1110 541-542 . denotes .
T1111 542-722 sentence denotes The BAT-gal transgene reporter of canonical Wnt signaling showed reduced levels of expression in Pygo1-/-/Pygo2-/- mutants, with tissue-specific variation in degree of diminution.
T1112 543-546 DT denotes The
T1113 565-573 NN denotes reporter
T1114 547-550 NN denotes BAT
T1115 551-554 NN denotes gal
T1116 550-551 HYPH denotes -
T1117 555-564 NN denotes transgene
T1118 601-607 VBD denotes showed
T1119 574-576 IN denotes of
T1120 577-586 JJ denotes canonical
T1121 591-600 NN denotes signaling
T1122 587-590 NN denotes Wnt
T1123 608-615 VBN denotes reduced
T1124 616-622 NNS denotes levels
T1125 623-625 IN denotes of
T1126 626-636 NN denotes expression
T1127 637-639 IN denotes in
T1128 640-645 NN denotes Pygo1
T1129 658-665 NNS denotes mutants
T1130 645-646 SYM denotes -
T1131 646-647 HYPH denotes /
T1132 647-648 SYM denotes -
T1133 648-649 HYPH denotes /
T1134 649-654 NN denotes Pygo2
T1135 654-655 SYM denotes -
T1136 655-656 HYPH denotes /
T1137 656-657 SYM denotes -
T1138 665-667 , denotes ,
T1139 667-671 IN denotes with
T1140 672-678 NN denotes tissue
T1141 679-687 JJ denotes specific
T1142 678-679 HYPH denotes -
T1143 688-697 NN denotes variation
T1144 698-700 IN denotes in
T1145 701-707 NN denotes degree
T1146 708-710 IN denotes of
T1147 711-721 NN denotes diminution
T1148 721-722 . denotes .
T1149 722-860 sentence denotes The Pygo1 and Pygo2 genes both showed widespread expression in the developing kidney, with raised levels in the stromal cell compartment.
T1150 723-726 DT denotes The
T1151 743-748 NNS denotes genes
T1152 727-732 NN denotes Pygo1
T1153 733-736 CC denotes and
T1154 737-742 NN denotes Pygo2
T1155 754-760 VBD denotes showed
T1156 749-753 RB denotes both
T1157 761-771 JJ denotes widespread
T1158 772-782 NN denotes expression
T1159 783-785 IN denotes in
T1160 786-789 DT denotes the
T1161 801-807 NN denotes kidney
T1162 790-800 VBG denotes developing
T1163 807-809 , denotes ,
T1164 809-813 IN denotes with
T1165 814-820 VBN denotes raised
T1166 821-827 NNS denotes levels
T1167 828-830 IN denotes in
T1168 831-834 DT denotes the
T1169 848-859 NN denotes compartment
T1170 835-842 JJ denotes stromal
T1171 843-847 NN denotes cell
T1172 859-860 . denotes .
T1173 860-1000 sentence denotes Confocal analysis of the double mutant kidneys showed disturbance of both the ureteric bud and metanephric mesenchyme-derived compartments.
T1174 861-869 JJ denotes Confocal
T1175 870-878 NN denotes analysis
T1176 908-914 VBD denotes showed
T1177 879-881 IN denotes of
T1178 882-885 DT denotes the
T1179 900-907 NNS denotes kidneys
T1180 886-892 JJ denotes double
T1181 893-899 NN denotes mutant
T1182 915-926 NN denotes disturbance
T1183 927-929 IN denotes of
T1184 930-934 CC denotes both
T1185 987-999 NNS denotes compartments
T1186 935-938 DT denotes the
T1187 939-947 JJ denotes ureteric
T1188 948-951 NN denotes bud
T1189 979-986 VBN denotes derived
T1190 952-955 CC denotes and
T1191 956-967 JJ denotes metanephric
T1192 968-978 NN denotes mesenchyme
T1193 978-979 HYPH denotes -
T1194 999-1000 . denotes .
T1195 1000-1165 sentence denotes Branching morphogenesis of the ureteric bud was altered, with expanded tips and reduced tip density, probably contributing to the smaller size of the mutant kidney.
T1196 1001-1010 VBG denotes Branching
T1197 1011-1024 NN denotes morphogenesis
T1198 1049-1056 VBN denotes altered
T1199 1025-1027 IN denotes of
T1200 1028-1031 DT denotes the
T1201 1041-1044 NN denotes bud
T1202 1032-1040 JJ denotes ureteric
T1203 1045-1048 VBD denotes was
T1204 1056-1058 , denotes ,
T1205 1058-1062 IN denotes with
T1206 1063-1071 VBN denotes expanded
T1207 1072-1076 NNS denotes tips
T1208 1077-1080 CC denotes and
T1209 1081-1088 VBN denotes reduced
T1210 1093-1100 NN denotes density
T1211 1089-1092 NN denotes tip
T1212 1100-1102 , denotes ,
T1213 1102-1110 RB denotes probably
T1214 1111-1123 VBG denotes contributing
T1215 1124-1126 IN denotes to
T1216 1127-1130 DT denotes the
T1217 1139-1143 NN denotes size
T1218 1131-1138 JJR denotes smaller
T1219 1144-1146 IN denotes of
T1220 1147-1150 DT denotes the
T1221 1158-1164 NN denotes kidney
T1222 1151-1157 NN denotes mutant
T1223 1164-1165 . denotes .
T1224 1165-1263 sentence denotes In addition, there was an expansion of the zone of condensed mesenchyme capping the ureteric bud.
T1225 1166-1168 IN denotes In
T1226 1185-1188 VBD denotes was
T1227 1169-1177 NN denotes addition
T1228 1177-1179 , denotes ,
T1229 1179-1184 EX denotes there
T1230 1189-1191 DT denotes an
T1231 1192-1201 NN denotes expansion
T1232 1202-1204 IN denotes of
T1233 1205-1208 DT denotes the
T1234 1209-1213 NN denotes zone
T1235 1214-1216 IN denotes of
T1236 1217-1226 VBN denotes condensed
T1237 1227-1237 NN denotes mesenchyme
T1238 1238-1245 VBG denotes capping
T1239 1246-1249 DT denotes the
T1240 1259-1262 NN denotes bud
T1241 1250-1258 JJ denotes ureteric
T1242 1262-1263 . denotes .
T1243 1263-1311 sentence denotes Nephron formation, however, proceeded normally.
T1244 1264-1271 NN denotes Nephron
T1245 1272-1281 NN denotes formation
T1246 1292-1301 VBD denotes proceeded
T1247 1281-1283 , denotes ,
T1248 1283-1290 RB denotes however
T1249 1290-1292 , denotes ,
T1250 1302-1310 RB denotes normally
T1251 1310-1311 . denotes .
T1252 1311-1487 sentence denotes Microarray analysis showed changed expression of several genes, including Cxcl13, Slc5a2, Klk5, Ren2 and Timeless, which represent candidate Wnt targets in kidney development.
T1253 1312-1322 NN denotes Microarray
T1254 1323-1331 NN denotes analysis
T1255 1332-1338 VBD denotes showed
T1256 1339-1346 VBN denotes changed
T1257 1347-1357 NN denotes expression
T1258 1358-1360 IN denotes of
T1259 1361-1368 JJ denotes several
T1260 1369-1374 NNS denotes genes
T1261 1374-1376 , denotes ,
T1262 1376-1385 VBG denotes including
T1263 1386-1392 NN denotes Cxcl13
T1264 1392-1394 , denotes ,
T1265 1394-1400 NN denotes Slc5a2
T1266 1400-1402 , denotes ,
T1267 1402-1406 NN denotes Klk5
T1268 1406-1408 , denotes ,
T1269 1408-1412 NN denotes Ren2
T1270 1413-1416 CC denotes and
T1271 1417-1425 NN denotes Timeless
T1272 1425-1427 , denotes ,
T1273 1427-1432 WDT denotes which
T1274 1433-1442 VBP denotes represent
T1275 1443-1452 NN denotes candidate
T1276 1457-1464 NNS denotes targets
T1277 1453-1456 NN denotes Wnt
T1278 1465-1467 IN denotes in
T1279 1468-1474 NN denotes kidney
T1280 1475-1486 NN denotes development
T1281 1486-1487 . denotes .
R67 T1016 T1017 det Each,mutation
R68 T1017 T1018 nsubj mutation,resulted
R69 T1019 T1018 aux deleted,resulted
R70 T1020 T1021 punct >,80
R71 T1021 T1022 nummod 80,%
R72 T1022 T1018 dobj %,resulted
R73 T1023 T1022 prep of,%
R74 T1024 T1025 det the,sequence
R75 T1025 T1023 pobj sequence,of
R76 T1026 T1025 compound coding,sequence
R77 T1027 T1022 punct ", ",%
R78 T1028 T1022 prep including,%
R79 T1029 T1030 det the,domain
R80 T1030 T1028 pobj domain,including
R81 T1031 T1030 amod critical,domain
R82 T1032 T1030 compound PHD,domain
R83 T1033 T1018 punct ", ",resulted
R84 T1034 T1018 cc and,resulted
R85 T1035 T1036 advmod almost,certainly
R86 T1036 T1018 advmod certainly,resulted
R87 T1037 T1018 prep in,resulted
R88 T1038 T1039 amod null,function
R89 T1039 T1037 pobj function,in
R90 T1040 T1018 punct .,resulted
R91 T1042 T1043 npadvmod Pygo2,homozygous
R92 T1043 T1044 amod homozygous,mutants
R93 T1044 T1045 nsubj mutants,died
R94 T1046 T1045 punct ", ",died
R95 T1047 T1045 prep with,died
R96 T1048 T1049 amod rare,exception
R97 T1049 T1047 pobj exception,with
R98 T1050 T1045 punct ", ",died
R99 T1051 T1052 advmod shortly,after
R100 T1052 T1045 prep after,died
R101 T1053 T1052 pobj birth,after
R102 T1054 T1045 punct ", ",died
R103 T1055 T1045 prep with,died
R104 T1056 T1057 det a,phenotype
R105 T1057 T1055 pobj phenotype,with
R106 T1058 T1057 prep including,phenotype
R107 T1059 T1060 compound lens,agenesis
R108 T1060 T1058 pobj agenesis,including
R109 T1061 T1060 punct ", ",agenesis
R110 T1062 T1063 compound growth,retardation
R111 T1063 T1060 conj retardation,agenesis
R112 T1064 T1063 punct ", ",retardation
R113 T1065 T1066 amod altered,development
R114 T1066 T1063 conj development,retardation
R115 T1067 T1066 compound kidney,development
R116 T1068 T1066 punct ", ",development
R117 T1069 T1066 cc and,development
R118 T1070 T1071 prep in,exencephaly
R119 T1071 T1066 conj exencephaly,development
R120 T1072 T1073 det some,cases
R121 T1073 T1070 pobj cases,in
R122 T1074 T1071 cc and,exencephaly
R123 T1075 T1076 amod cleft,palate
R124 T1076 T1071 conj palate,exencephaly
R125 T1077 T1045 punct .,died
R126 T1079 T1080 npadvmod Pygo1,homozygous
R127 T1080 T1081 amod homozygous,mutants
R128 T1081 T1082 nsubj mutants,were
R129 T1083 T1082 punct ", ",were
R130 T1084 T1082 advmod however,were
R131 T1085 T1082 punct ", ",were
R132 T1086 T1082 acomp viable,were
R133 T1087 T1086 cc and,viable
R134 T1088 T1086 conj fertile,viable
R135 T1089 T1082 punct ", ",were
R136 T1090 T1082 prep with,were
R137 T1091 T1092 det no,defects
R138 T1092 T1090 pobj defects,with
R139 T1093 T1092 amod detectable,defects
R140 T1094 T1092 amod developmental,defects
R141 T1095 T1082 punct .,were
R142 T1097 T1098 amod Double,Pygo2
R143 T1098 T1101 npadvmod Pygo2,homozygous
R144 T1099 T1098 compound Pygo1,Pygo2
R145 T1100 T1098 punct /,Pygo2
R146 T1101 T1102 amod homozygous,mutants
R147 T1102 T1103 nsubj mutants,showed
R148 T1104 T1105 det no,synergy
R149 T1105 T1103 dobj synergy,showed
R150 T1106 T1105 amod apparent,synergy
R151 T1107 T1105 prep in,synergy
R152 T1108 T1109 compound phenotype,severity
R153 T1109 T1107 pobj severity,in
R154 T1110 T1103 punct .,showed
R155 T1112 T1113 det The,reporter
R156 T1113 T1118 nsubj reporter,showed
R157 T1114 T1115 compound BAT,gal
R158 T1115 T1117 compound gal,transgene
R159 T1116 T1115 punct -,gal
R160 T1117 T1113 compound transgene,reporter
R161 T1119 T1113 prep of,reporter
R162 T1120 T1121 amod canonical,signaling
R163 T1121 T1119 pobj signaling,of
R164 T1122 T1121 compound Wnt,signaling
R165 T1123 T1124 amod reduced,levels
R166 T1124 T1118 dobj levels,showed
R167 T1125 T1124 prep of,levels
R168 T1126 T1125 pobj expression,of
R169 T1127 T1124 prep in,levels
R170 T1128 T1129 nmod Pygo1,mutants
R171 T1129 T1127 pobj mutants,in
R172 T1130 T1128 punct -,Pygo1
R173 T1131 T1128 punct /,Pygo1
R174 T1132 T1128 punct -,Pygo1
R175 T1133 T1128 punct /,Pygo1
R176 T1134 T1128 appos Pygo2,Pygo1
R177 T1135 T1134 punct -,Pygo2
R178 T1136 T1134 punct /,Pygo2
R179 T1137 T1134 punct -,Pygo2
R180 T1138 T1118 punct ", ",showed
R181 T1139 T1118 prep with,showed
R182 T1140 T1141 npadvmod tissue,specific
R183 T1141 T1143 amod specific,variation
R184 T1142 T1141 punct -,specific
R185 T1143 T1139 pobj variation,with
R186 T1144 T1143 prep in,variation
R187 T1145 T1144 pobj degree,in
R188 T1146 T1145 prep of,degree
R189 T1147 T1146 pobj diminution,of
R190 T1148 T1118 punct .,showed
R191 T1150 T1151 det The,genes
R193 T1152 T1151 nmod Pygo1,genes
R194 T1153 T1152 cc and,Pygo1
R195 T1154 T1152 conj Pygo2,Pygo1
R196 T1156 T1151 appos both,genes
R197 T1157 T1158 amod widespread,expression
R198 T1158 T1155 dobj expression,showed
R199 T1159 T1158 prep in,expression
R200 T1160 T1161 det the,kidney
R201 T1161 T1159 pobj kidney,in
R202 T1162 T1161 amod developing,kidney
R203 T1163 T1155 punct ", ",showed
R204 T1164 T1155 prep with,showed
R205 T1165 T1166 amod raised,levels
R206 T1166 T1164 pobj levels,with
R207 T1167 T1166 prep in,levels
R208 T1168 T1169 det the,compartment
R209 T1169 T1167 pobj compartment,in
R210 T1170 T1171 amod stromal,cell
R211 T1171 T1169 compound cell,compartment
R212 T1172 T1155 punct .,showed
R213 T1174 T1175 amod Confocal,analysis
R214 T1175 T1176 nsubj analysis,showed
R215 T1177 T1175 prep of,analysis
R216 T1178 T1179 det the,kidneys
R217 T1179 T1177 pobj kidneys,of
R218 T1180 T1181 amod double,mutant
R219 T1181 T1179 compound mutant,kidneys
R220 T1182 T1176 dobj disturbance,showed
R221 T1183 T1182 prep of,disturbance
R222 T1184 T1185 preconj both,compartments
R223 T1185 T1183 pobj compartments,of
R224 T1186 T1185 det the,compartments
R225 T1187 T1188 amod ureteric,bud
R226 T1188 T1189 npadvmod bud,derived
R228 T1190 T1188 cc and,bud
R229 T1191 T1192 amod metanephric,mesenchyme
R230 T1192 T1188 conj mesenchyme,bud
R231 T1193 T1189 punct -,derived
R232 T1194 T1176 punct .,showed
R233 T1196 T1197 amod Branching,morphogenesis
R234 T1197 T1198 nsubjpass morphogenesis,altered
R235 T1199 T1197 prep of,morphogenesis
R236 T1200 T1201 det the,bud
R237 T1201 T1199 pobj bud,of
R238 T1202 T1201 amod ureteric,bud
R239 T1203 T1198 auxpass was,altered
R240 T1204 T1198 punct ", ",altered
R241 T1205 T1198 prep with,altered
R242 T1206 T1207 amod expanded,tips
R243 T1207 T1205 pobj tips,with
R244 T1208 T1207 cc and,tips
R245 T1209 T1210 amod reduced,density
R246 T1210 T1207 conj density,tips
R247 T1211 T1210 compound tip,density
R248 T1212 T1198 punct ", ",altered
R249 T1213 T1214 advmod probably,contributing
R250 T1214 T1198 advcl contributing,altered
R251 T1215 T1214 prep to,contributing
R252 T1216 T1217 det the,size
R253 T1217 T1215 pobj size,to
R254 T1218 T1217 amod smaller,size
R255 T1219 T1217 prep of,size
R256 T1220 T1221 det the,kidney
R257 T1221 T1219 pobj kidney,of
R258 T1222 T1221 compound mutant,kidney
R259 T1223 T1198 punct .,altered
R260 T1225 T1226 prep In,was
R261 T1227 T1225 pobj addition,In
R262 T1228 T1226 punct ", ",was
R263 T1229 T1226 expl there,was
R264 T1230 T1231 det an,expansion
R265 T1231 T1226 attr expansion,was
R266 T1232 T1231 prep of,expansion
R267 T1233 T1234 det the,zone
R268 T1234 T1232 pobj zone,of
R269 T1235 T1234 prep of,zone
R270 T1236 T1237 amod condensed,mesenchyme
R271 T1237 T1235 pobj mesenchyme,of
R272 T1238 T1234 acl capping,zone
R273 T1239 T1240 det the,bud
R274 T1240 T1238 dobj bud,capping
R275 T1241 T1240 amod ureteric,bud
R276 T1242 T1226 punct .,was
R277 T1244 T1245 compound Nephron,formation
R278 T1245 T1246 nsubj formation,proceeded
R279 T1247 T1246 punct ", ",proceeded
R280 T1248 T1246 advmod however,proceeded
R281 T1249 T1246 punct ", ",proceeded
R282 T1250 T1246 advmod normally,proceeded
R283 T1251 T1246 punct .,proceeded
R284 T1253 T1254 compound Microarray,analysis
R285 T1254 T1255 nsubj analysis,showed
R286 T1256 T1257 amod changed,expression
R287 T1257 T1255 dobj expression,showed
R288 T1258 T1257 prep of,expression
R289 T1259 T1260 amod several,genes
R290 T1260 T1258 pobj genes,of
R291 T1261 T1260 punct ", ",genes
R292 T1262 T1260 prep including,genes
R293 T1263 T1262 pobj Cxcl13,including
R294 T1264 T1263 punct ", ",Cxcl13
R295 T1265 T1263 conj Slc5a2,Cxcl13
R296 T1266 T1265 punct ", ",Slc5a2
R297 T1267 T1265 conj Klk5,Slc5a2
R298 T1268 T1267 punct ", ",Klk5
R299 T1269 T1267 conj Ren2,Klk5
R300 T1270 T1269 cc and,Ren2
R301 T1271 T1269 conj Timeless,Ren2
R302 T1272 T1260 punct ", ",genes
R303 T1273 T1274 dep which,represent
R304 T1274 T1260 relcl represent,genes
R305 T1275 T1276 compound candidate,targets
R306 T1276 T1274 dobj targets,represent
R307 T1277 T1276 compound Wnt,targets
R308 T1278 T1276 prep in,targets
R309 T1279 T1280 compound kidney,development
R310 T1280 T1278 pobj development,in
R311 T1281 T1255 punct .,showed
R192 T1151 T1155 nsubj genes,showed
R227 T1189 T1185 amod derived,compartments

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T860 13-21 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T861 22-29 SO_EXT:sequence_deletion_process denotes deleted
T862 42-57 SO_EXT:coding_sequence denotes coding sequence
T863 86-92 SO_EXT:0000417 denotes domain
T864 127-131 SO_EXT:sequence_nullness denotes null
T865 142-147 PR_EXT:000013524 denotes Pygo2
T866 159-166 SO_EXT:sequence_altered_entity denotes mutants
T868 208-213 GO:0007567 denotes birth
T869 242-246 UBERON_EXT:lens denotes lens
T870 257-263 GO_EXT:biological_growth_entity_or_process denotes growth
T871 285-291 UBERON:0002113 denotes kidney
T872 285-303 GO:0001822 denotes kidney development
T873 353-358 PR_EXT:000013523 denotes Pygo1
T874 370-377 SO_EXT:sequence_altered_entity denotes mutants
T875 462-467 PR_EXT:000013523 denotes Pygo1
T876 468-473 PR_EXT:000013524 denotes Pygo2
T877 485-492 SO_EXT:sequence_altered_entity denotes mutants
T878 551-554 GO_EXT:0015925 denotes gal
T879 555-564 SO_EXT:0000902 denotes transgene
T880 577-600 GO:0060070 denotes canonical Wnt signaling
T881 626-636 GO:0010467 denotes expression
T882 640-645 PR_EXT:000013523 denotes Pygo1
T883 645-646 SO_EXT:sequence_nullness_or_absence denotes -
T884 647-648 SO_EXT:sequence_nullness_or_absence denotes -
T885 649-654 PR_EXT:000013524 denotes Pygo2
T886 654-655 SO_EXT:sequence_nullness_or_absence denotes -
T887 656-657 SO_EXT:sequence_nullness_or_absence denotes -
T888 658-665 SO_EXT:sequence_altered_entity denotes mutants
T889 672-678 UBERON:0000479 denotes tissue
T890 727-732 PR_EXT:000013523 denotes Pygo1
T891 737-742 PR_EXT:000013524 denotes Pygo2
T892 743-748 SO_EXT:0000704 denotes genes
T893 772-782 GO:0010467 denotes expression
T894 801-807 UBERON:0002113 denotes kidney
T895 835-842 UBERON:0003891 denotes stromal
T896 835-847 CL:0000499 denotes stromal cell
T897 843-847 CL_GO_EXT:cell denotes cell
T898 893-899 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T899 900-907 UBERON:0002113 denotes kidneys
T900 939-951 UBERON:0000084 denotes ureteric bud
T901 956-978 UBERON:0003220 denotes metanephric mesenchyme
T902 1001-1027 _FRAGMENT denotes Branching morphogenesis of
T903 1032-1044 GO:0001658 denotes ureteric bud
T904 1032-1044 UBERON:0000084 denotes ureteric bud
T905 1151-1157 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T906 1158-1164 UBERON:0002113 denotes kidney
T907 1227-1237 UBERON:0003104 denotes mesenchyme
T908 1250-1262 UBERON:0000084 denotes ureteric bud
T909 1264-1271 UBERON:0001285 denotes Nephron
T910 1264-1281 GO:0072006 denotes Nephron formation
T911 1347-1357 GO:0010467 denotes expression
T912 1369-1374 SO_EXT:0000704 denotes genes
T913 1386-1392 PR_EXT:000006067 denotes Cxcl13
T914 1394-1400 PR_EXT:000015169 denotes Slc5a2
T915 1402-1406 PR_EXT:000009415 denotes Klk5
T916 1408-1412 PR_EXT:000014395 denotes Ren2
T917 1417-1425 PR_EXT:000016340 denotes Timeless
T918 1468-1474 UBERON:0002113 denotes kidney
T919 1468-1486 GO:0001822 denotes kidney development
T867 189-193 GO:0016265 denotes died
R3 T903 T902 _lexicallyChainedTo ureteric bud,Branching morphogenesis of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T775 86-92 SO:0000417 denotes domain
T776 142-147 PR:000013524 denotes Pygo2
T777 189-193 GO:0016265 denotes died
T778 208-213 GO:0007567 denotes birth
T779 285-291 UBERON:0002113 denotes kidney
T780 285-303 GO:0001822 denotes kidney development
T781 353-358 PR:000013523 denotes Pygo1
T782 462-467 PR:000013523 denotes Pygo1
T783 468-473 PR:000013524 denotes Pygo2
T784 555-564 SO:0000902 denotes transgene
T785 577-600 GO:0060070 denotes canonical Wnt signaling
T786 626-636 GO:0010467 denotes expression
T787 640-645 PR:000013523 denotes Pygo1
T788 649-654 PR:000013524 denotes Pygo2
T789 672-678 UBERON:0000479 denotes tissue
T790 727-732 PR:000013523 denotes Pygo1
T791 737-742 PR:000013524 denotes Pygo2
T792 743-748 SO:0000704 denotes genes
T793 772-782 GO:0010467 denotes expression
T794 801-807 UBERON:0002113 denotes kidney
T795 835-842 UBERON:0003891 denotes stromal
T796 835-847 CL:0000499 denotes stromal cell
T797 900-907 UBERON:0002113 denotes kidneys
T798 939-951 UBERON:0000084 denotes ureteric bud
T799 956-978 UBERON:0003220 denotes metanephric mesenchyme
T800 1001-1027 _FRAGMENT denotes Branching morphogenesis of
T801 1032-1044 GO:0001658 denotes ureteric bud
T802 1032-1044 UBERON:0000084 denotes ureteric bud
T803 1158-1164 UBERON:0002113 denotes kidney
T804 1227-1237 UBERON:0003104 denotes mesenchyme
T805 1250-1262 UBERON:0000084 denotes ureteric bud
T806 1264-1271 UBERON:0001285 denotes Nephron
T807 1264-1281 GO:0072006 denotes Nephron formation
T808 1347-1357 GO:0010467 denotes expression
T809 1369-1374 SO:0000704 denotes genes
T810 1386-1392 PR:000006067 denotes Cxcl13
T811 1394-1400 PR:000015169 denotes Slc5a2
T812 1402-1406 PR:000009415 denotes Klk5
T813 1408-1412 PR:000014395 denotes Ren2
T814 1417-1425 PR:000016340 denotes Timeless
T815 1468-1474 UBERON:0002113 denotes kidney
T816 1468-1486 GO:0001822 denotes kidney development
R1 T801 T800 _lexicallyChainedTo ureteric bud,Branching morphogenesis of