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PMC:1858683 / 39641-40033 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T18522 391-392 . denotes .
T18521 369-391 NN denotes GCCCTCCCCGACGTTTATATTG
T18520 367-368 NN denotes R
T18519 365-367 , denotes ,
T18518 339-365 NN denotes AAGCGTGCCTCATCTCCATCCCTAAG
T18517 337-338 NN denotes F
T18516 335-337 , denotes ,
T18515 322-328 VBN denotes floxed
T18514 319-321 CC denotes or
T18513 316-318 NN denotes WT
T18512 329-335 NN denotes allele
T18511 310-315 NN denotes Pygo1
T18510 308-309 : denotes ;
T18509 286-287 HYPH denotes -
T18508 285-286 SYM denotes '
T18507 287-308 NN denotes CACTTCTGCCCCTCTCTTTGC
T18506 284-285 CD denotes 5
T18505 282-283 NN denotes R
T18504 280-282 , denotes ,
T18503 255-280 NN denotes AGTTTGAAATAGCGACGAGTTTGAG
T18502 253-254 NN denotes F
T18501 251-253 , denotes ,
T18500 245-251 NN denotes allele
T18499 240-244 JJ denotes null
T18498 234-239 NN denotes Pygo1
T18497 232-233 : denotes ;
T18496 208-232 NN denotes AGATTCAGTAAGCTGAGCCTGGTG
T18495 206-207 NN denotes R
T18494 204-206 , denotes ,
T18493 181-204 NN denotes TGTCTTGATGACAGCGTTTAGCC
T18492 179-180 NN denotes F
T18491 177-179 , denotes ,
T18490 164-170 VBN denotes floxed
T18489 161-163 CC denotes or
T18488 158-160 NN denotes WT
T18487 171-177 NN denotes allele
T18486 152-157 NN denotes Pygo2
T18485 150-151 : denotes ;
T18484 126-127 -RRB- denotes )
T18483 125-126 NN denotes R
T18482 124-125 -LRB- denotes (
T18481 128-150 NN denotes AAGGTATTTGGTGCTCCGAGGG
T18480 116-123 RB denotes reverse
T18479 114-115 : denotes ;
T18478 89-90 -RRB- denotes )
T18477 88-89 NN denotes F
T18476 87-88 -LRB- denotes (
T18475 91-114 NN denotes CCTGGATTCTTGTTGCTGGTATG
T18474 79-86 RB denotes forward
T18473 77-79 , denotes ,
T18472 71-77 NN denotes allele
T18471 66-70 JJ denotes null
T18470 60-65 NN denotes Pygo2
T18469 58-60 : denotes :
T18468 50-53 NN denotes PCR
T18467 39-49 VBG denotes genotyping
T18466 35-38 IN denotes for
T18465 30-34 VBN denotes used
T18464 22-29 NNS denotes primers
T18463 18-21 DT denotes the
T18462 15-17 IN denotes of
T18461 54-58 VBD denotes were
T18460 5-14 NNS denotes sequences
T18459 1-4 DT denotes The
T18458 0-392 sentence denotes The sequences of the primers used for genotyping PCR were: Pygo2 null allele, forward (F) CCTGGATTCTTGTTGCTGGTATG; reverse (R) AAGGTATTTGGTGCTCCGAGGG; Pygo2 WT or floxed allele, F TGTCTTGATGACAGCGTTTAGCC, R AGATTCAGTAAGCTGAGCCTGGTG; Pygo1 null allele, F AGTTTGAAATAGCGACGAGTTTGAG, R 5'-CACTTCTGCCCCTCTCTTTGC; Pygo1 WT or floxed allele, F AAGCGTGCCTCATCTCCATCCCTAAG, R GCCCTCCCCGACGTTTATATTG.
R5244 T18459 T18460 det The,sequences
R5245 T18460 T18461 nsubj sequences,were
R5246 T18462 T18460 prep of,sequences
R5247 T18463 T18464 det the,primers
R5248 T18464 T18462 pobj primers,of
R5249 T18465 T18464 acl used,primers
R5250 T18466 T18465 prep for,used
R5251 T18467 T18468 amod genotyping,PCR
R5252 T18468 T18466 pobj PCR,for
R5253 T18469 T18461 punct : ,were
R5254 T18470 T18471 npadvmod Pygo2,null
R5255 T18471 T18472 amod null,allele
R5256 T18472 T18461 attr allele,were
R5257 T18473 T18472 punct ", ",allele
R5258 T18474 T18475 nmod forward,CCTGGATTCTTGTTGCTGGTATG
R5259 T18475 T18472 appos CCTGGATTCTTGTTGCTGGTATG,allele
R5260 T18476 T18474 punct (,forward
R5261 T18477 T18474 appos F,forward
R5262 T18478 T18475 punct ),CCTGGATTCTTGTTGCTGGTATG
R5263 T18479 T18475 punct ;,CCTGGATTCTTGTTGCTGGTATG
R5264 T18480 T18481 nmod reverse,AAGGTATTTGGTGCTCCGAGGG
R5265 T18481 T18475 appos AAGGTATTTGGTGCTCCGAGGG,CCTGGATTCTTGTTGCTGGTATG
R5266 T18482 T18480 punct (,reverse
R5267 T18483 T18480 appos R,reverse
R5268 T18484 T18481 punct ),AAGGTATTTGGTGCTCCGAGGG
R5269 T18485 T18472 punct ;,allele
R5270 T18486 T18487 nmod Pygo2,allele
R5271 T18487 T18472 appos allele,allele
R5272 T18488 T18487 nmod WT,allele
R5273 T18489 T18488 cc or,WT
R5274 T18490 T18488 conj floxed,WT
R5275 T18491 T18487 punct ", ",allele
R5276 T18492 T18493 compound F,TGTCTTGATGACAGCGTTTAGCC
R5277 T18493 T18487 appos TGTCTTGATGACAGCGTTTAGCC,allele
R5278 T18494 T18493 punct ", ",TGTCTTGATGACAGCGTTTAGCC
R5279 T18495 T18496 compound R,AGATTCAGTAAGCTGAGCCTGGTG
R5280 T18496 T18493 appos AGATTCAGTAAGCTGAGCCTGGTG,TGTCTTGATGACAGCGTTTAGCC
R5281 T18497 T18472 punct ;,allele
R5282 T18498 T18499 npadvmod Pygo1,null
R5283 T18499 T18500 amod null,allele
R5284 T18500 T18472 appos allele,allele
R5285 T18501 T18500 punct ", ",allele
R5286 T18502 T18503 compound F,AGTTTGAAATAGCGACGAGTTTGAG
R5287 T18503 T18500 appos AGTTTGAAATAGCGACGAGTTTGAG,allele
R5288 T18504 T18503 punct ", ",AGTTTGAAATAGCGACGAGTTTGAG
R5289 T18505 T18506 nmod R,5
R5290 T18506 T18507 nummod 5,CACTTCTGCCCCTCTCTTTGC
R5291 T18507 T18503 appos CACTTCTGCCCCTCTCTTTGC,AGTTTGAAATAGCGACGAGTTTGAG
R5292 T18508 T18506 punct ',5
R5293 T18509 T18507 punct -,CACTTCTGCCCCTCTCTTTGC
R5294 T18510 T18472 punct ;,allele
R5295 T18511 T18512 nmod Pygo1,allele
R5296 T18512 T18472 appos allele,allele
R5297 T18513 T18512 nmod WT,allele
R5298 T18514 T18513 cc or,WT
R5299 T18515 T18513 conj floxed,WT
R5300 T18516 T18512 punct ", ",allele
R5301 T18517 T18518 compound F,AAGCGTGCCTCATCTCCATCCCTAAG
R5302 T18518 T18512 appos AAGCGTGCCTCATCTCCATCCCTAAG,allele
R5303 T18519 T18518 punct ", ",AAGCGTGCCTCATCTCCATCCCTAAG
R5304 T18520 T18521 compound R,GCCCTCCCCGACGTTTATATTG
R5305 T18521 T18518 appos GCCCTCCCCGACGTTTATATTG,AAGCGTGCCTCATCTCCATCCCTAAG
R5306 T18522 T18461 punct .,were

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T18187 367-368 SO:0001031 denotes R
T18186 337-338 SO:0001030 denotes F
T18185 329-335 SO_EXT:0001023 denotes allele
T18184 322-328 SO:0000359 denotes floxed
T18183 316-318 SO_EXT:wild_type_entity_or_quality denotes WT
T18182 310-315 PR_EXT:000013523 denotes Pygo1
T18181 282-283 SO:0001031 denotes R
T18180 253-254 SO:0001030 denotes F
T18179 245-251 SO_EXT:0001023 denotes allele
T18178 240-244 SO_EXT:sequence_nullness denotes null
T18177 234-239 PR_EXT:000013523 denotes Pygo1
T18176 206-207 SO:0001031 denotes R
T18175 179-180 SO:0001030 denotes F
T18174 171-177 SO_EXT:0001023 denotes allele
T18173 164-170 SO:0000359 denotes floxed
T18172 158-160 SO_EXT:wild_type_entity_or_quality denotes WT
T18171 152-157 PR_EXT:000013524 denotes Pygo2
T18170 125-126 SO:0001031 denotes R
T18169 116-123 SO:0001031 denotes reverse
T18168 88-89 SO:0001030 denotes F
T18167 79-86 SO:0001030 denotes forward
T18166 71-77 SO_EXT:0001023 denotes allele
T18165 66-70 SO_EXT:sequence_nullness denotes null
T18164 60-65 PR_EXT:000013524 denotes Pygo2
T18163 22-29 SO_EXT:0000112 denotes primers
T18162 5-14 SO_EXT:biological_sequence denotes sequences

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T18099 367-368 SO:0001031 denotes R
T18098 337-338 SO:0001030 denotes F
T18097 329-335 SO:0001023 denotes allele
T18096 322-328 SO:0000359 denotes floxed
T18095 310-315 PR:000013523 denotes Pygo1
T18094 282-283 SO:0001031 denotes R
T18093 253-254 SO:0001030 denotes F
T18092 245-251 SO:0001023 denotes allele
T18091 234-239 PR:000013523 denotes Pygo1
T18090 206-207 SO:0001031 denotes R
T18089 179-180 SO:0001030 denotes F
T18088 171-177 SO:0001023 denotes allele
T18087 164-170 SO:0000359 denotes floxed
T18086 152-157 PR:000013524 denotes Pygo2
T18085 125-126 SO:0001031 denotes R
T18084 116-123 SO:0001031 denotes reverse
T18083 88-89 SO:0001030 denotes F
T18082 79-86 SO:0001030 denotes forward
T18081 71-77 SO:0001023 denotes allele
T18080 60-65 PR:000013524 denotes Pygo2
T18079 22-29 SO:0000112 denotes primers