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PMC:1858683 / 3432-4373 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T2823 0-7 JJ denotes Genetic
T2824 8-15 NNS denotes studies
T2825 35-45 VBN denotes identified
T2826 16-18 IN denotes in
T2827 19-29 NNP denotes Drosophila
T2828 30-34 VBP denotes have
T2829 46-49 DT denotes the
T2830 65-69 NN denotes gene
T2831 50-57 NN denotes Pygopus
T2832 58-59 -LRB- denotes (
T2833 59-63 NN denotes Pygo
T2834 63-64 -RRB- denotes )
T2835 70-72 IN denotes as
T2836 73-74 DT denotes a
T2837 84-93 NN denotes component
T2838 75-83 JJ denotes critical
T2839 94-96 IN denotes of
T2840 97-106 JJ denotes canonical
T2841 111-120 NN denotes signaling
T2842 107-110 NN denotes Wnt
T2843 121-122 -LRB- denotes [
T2844 122-123 CD denotes 8
T2845 123-124 SYM denotes -
T2846 124-126 CD denotes 11
T2847 126-127 -RRB- denotes ]
T2848 127-128 . denotes .
T2849 128-295 sentence denotes Pygo and Lgs interact with β-catenin during the formation of the canonical transcriptional complex and are required for accumulation of β-catenin in the nucleus [12].
T2850 129-133 NN denotes Pygo
T2851 142-150 VBP denotes interact
T2852 134-137 CC denotes and
T2853 138-141 NN denotes Lgs
T2854 151-155 IN denotes with
T2855 156-157 NN denotes β
T2856 158-165 NN denotes catenin
T2857 157-158 HYPH denotes -
T2858 166-172 IN denotes during
T2859 173-176 DT denotes the
T2860 177-186 NN denotes formation
T2861 187-189 IN denotes of
T2862 190-193 DT denotes the
T2863 220-227 NN denotes complex
T2864 194-203 JJ denotes canonical
T2865 204-219 JJ denotes transcriptional
T2866 228-231 CC denotes and
T2867 232-235 VBP denotes are
T2868 236-244 VBN denotes required
T2869 245-248 IN denotes for
T2870 249-261 NN denotes accumulation
T2871 262-264 IN denotes of
T2872 265-266 NN denotes β
T2873 267-274 NN denotes catenin
T2874 266-267 HYPH denotes -
T2875 275-277 IN denotes in
T2876 278-281 DT denotes the
T2877 282-289 NN denotes nucleus
T2878 290-291 -LRB- denotes [
T2879 291-293 CD denotes 12
T2880 293-294 -RRB- denotes ]
T2881 294-295 . denotes .
T2882 295-424 sentence denotes Lgs binds the central armadillo repeats of β-catenin, while Pygo interacts with Lgs, mediating activation of Wnt targets [9,13].
T2883 296-299 NN denotes Lgs
T2884 300-305 VBZ denotes binds
T2885 306-309 DT denotes the
T2886 328-335 NNS denotes repeats
T2887 310-317 JJ denotes central
T2888 318-327 NN denotes armadillo
T2889 336-338 IN denotes of
T2890 339-340 NN denotes β
T2891 341-348 NN denotes catenin
T2892 340-341 HYPH denotes -
T2893 348-350 , denotes ,
T2894 350-355 IN denotes while
T2895 361-370 VBZ denotes interacts
T2896 356-360 NN denotes Pygo
T2897 371-375 IN denotes with
T2898 376-379 NN denotes Lgs
T2899 379-381 , denotes ,
T2900 381-390 VBG denotes mediating
T2901 391-401 NN denotes activation
T2902 402-404 IN denotes of
T2903 405-408 NN denotes Wnt
T2904 409-416 NNS denotes targets
T2905 417-418 -LRB- denotes [
T2906 420-422 CD denotes 13
T2907 418-419 CD denotes 9
T2908 419-420 , denotes ,
T2909 422-423 -RRB- denotes ]
T2910 423-424 . denotes .
T2911 424-579 sentence denotes The N-terminal domain of Pygo is required for Wnt transcriptional activation, while the PHD motif is required for the association of Pygo with Lgs [9,13].
T2912 425-428 DT denotes The
T2913 440-446 NN denotes domain
T2914 429-430 NN denotes N
T2915 431-439 JJ denotes terminal
T2916 430-431 HYPH denotes -
T2917 458-466 VBN denotes required
T2918 447-449 IN denotes of
T2919 450-454 NN denotes Pygo
T2920 455-457 VBZ denotes is
T2921 467-470 IN denotes for
T2922 471-474 NN denotes Wnt
T2923 491-501 NN denotes activation
T2924 475-490 JJ denotes transcriptional
T2925 501-503 , denotes ,
T2926 503-508 IN denotes while
T2927 526-534 VBN denotes required
T2928 509-512 DT denotes the
T2929 517-522 NN denotes motif
T2930 513-516 NN denotes PHD
T2931 523-525 VBZ denotes is
T2932 535-538 IN denotes for
T2933 539-542 DT denotes the
T2934 543-554 NN denotes association
T2935 555-557 IN denotes of
T2936 558-562 NN denotes Pygo
T2937 563-567 IN denotes with
T2938 568-571 NN denotes Lgs
T2939 572-573 -LRB- denotes [
T2940 575-577 CD denotes 13
T2941 573-574 CD denotes 9
T2942 574-575 , denotes ,
T2943 577-578 -RRB- denotes ]
T2944 578-579 . denotes .
T2945 579-762 sentence denotes Additionally, a putative nuclear localization signal (NLS) was identified within the N-terminal domain of Pygo, suggesting a possible role of nuclear importation of β-catenin [8,11].
T2946 580-592 RB denotes Additionally
T2947 643-653 VBN denotes identified
T2948 592-594 , denotes ,
T2949 594-595 DT denotes a
T2950 626-632 NN denotes signal
T2951 596-604 JJ denotes putative
T2952 605-612 JJ denotes nuclear
T2953 613-625 NN denotes localization
T2954 633-634 -LRB- denotes (
T2955 634-637 NN denotes NLS
T2956 637-638 -RRB- denotes )
T2957 639-642 VBD denotes was
T2958 654-660 IN denotes within
T2959 661-664 DT denotes the
T2960 676-682 NN denotes domain
T2961 665-666 NN denotes N
T2962 667-675 JJ denotes terminal
T2963 666-667 HYPH denotes -
T2964 683-685 IN denotes of
T2965 686-690 NN denotes Pygo
T2966 690-692 , denotes ,
T2967 692-702 VBG denotes suggesting
T2968 703-704 DT denotes a
T2969 714-718 NN denotes role
T2970 705-713 JJ denotes possible
T2971 719-721 IN denotes of
T2972 722-729 JJ denotes nuclear
T2973 730-741 NN denotes importation
T2974 742-744 IN denotes of
T2975 745-746 NN denotes β
T2976 747-754 NN denotes catenin
T2977 746-747 HYPH denotes -
T2978 755-756 -LRB- denotes [
T2979 758-760 CD denotes 11
T2980 756-757 CD denotes 8
T2981 757-758 , denotes ,
T2982 760-761 -RRB- denotes ]
T2983 761-762 . denotes .
T2984 762-941 sentence denotes Analyses of multiple aspects of the pygopus mutant phenotype indicate that this gene is dedicated to, and required for, canonical Wnt signaling during Drosophila development [9].
T2985 763-771 NNS denotes Analyses
T2986 824-832 VBP denotes indicate
T2987 772-774 IN denotes of
T2988 775-783 JJ denotes multiple
T2989 784-791 NNS denotes aspects
T2990 792-794 IN denotes of
T2991 795-798 DT denotes the
T2992 814-823 NN denotes phenotype
T2993 799-806 NN denotes pygopus
T2994 807-813 NN denotes mutant
T2995 833-837 IN denotes that
T2996 851-860 VBN denotes dedicated
T2997 838-842 DT denotes this
T2998 843-847 NN denotes gene
T2999 848-850 VBZ denotes is
T3000 861-863 IN denotes to
T3001 863-865 , denotes ,
T3002 865-868 CC denotes and
T3003 869-877 VBN denotes required
T3004 878-881 IN denotes for
T3005 881-883 , denotes ,
T3006 883-892 JJ denotes canonical
T3007 897-906 NN denotes signaling
T3008 893-896 NN denotes Wnt
T3009 907-913 IN denotes during
T3010 914-924 NNP denotes Drosophila
T3011 925-936 NN denotes development
T3012 937-938 -LRB- denotes [
T3013 938-939 CD denotes 9
T3014 939-940 -RRB- denotes ]
T3015 940-941 . denotes .
R569 T2823 T2824 amod Genetic,studies
R570 T2824 T2825 nsubj studies,identified
R571 T2826 T2824 prep in,studies
R572 T2827 T2826 pobj Drosophila,in
R573 T2828 T2825 aux have,identified
R574 T2829 T2830 det the,gene
R575 T2830 T2825 dobj gene,identified
R576 T2831 T2830 nmod Pygopus,gene
R577 T2832 T2831 punct (,Pygopus
R578 T2833 T2831 appos Pygo,Pygopus
R579 T2834 T2830 punct ),gene
R580 T2835 T2825 prep as,identified
R581 T2836 T2837 det a,component
R582 T2837 T2835 pobj component,as
R583 T2838 T2837 amod critical,component
R584 T2839 T2837 prep of,component
R585 T2840 T2841 amod canonical,signaling
R586 T2841 T2839 pobj signaling,of
R587 T2842 T2841 compound Wnt,signaling
R588 T2843 T2844 punct [,8
R589 T2844 T2825 parataxis 8,identified
R590 T2845 T2846 punct -,11
R591 T2846 T2844 prep 11,8
R592 T2847 T2844 punct ],8
R593 T2848 T2825 punct .,identified
R594 T2850 T2851 nsubj Pygo,interact
R595 T2852 T2850 cc and,Pygo
R596 T2853 T2850 conj Lgs,Pygo
R597 T2854 T2851 prep with,interact
R598 T2855 T2856 compound β,catenin
R599 T2856 T2854 pobj catenin,with
R600 T2857 T2856 punct -,catenin
R601 T2858 T2851 prep during,interact
R602 T2859 T2860 det the,formation
R603 T2860 T2858 pobj formation,during
R604 T2861 T2860 prep of,formation
R605 T2862 T2863 det the,complex
R606 T2863 T2861 pobj complex,of
R607 T2864 T2863 amod canonical,complex
R608 T2865 T2863 amod transcriptional,complex
R609 T2866 T2851 cc and,interact
R610 T2867 T2868 auxpass are,required
R611 T2868 T2851 conj required,interact
R612 T2869 T2868 prep for,required
R613 T2870 T2869 pobj accumulation,for
R614 T2871 T2870 prep of,accumulation
R615 T2872 T2873 compound β,catenin
R616 T2873 T2871 pobj catenin,of
R617 T2874 T2873 punct -,catenin
R618 T2875 T2870 prep in,accumulation
R619 T2876 T2877 det the,nucleus
R620 T2877 T2875 pobj nucleus,in
R621 T2878 T2879 punct [,12
R622 T2879 T2868 parataxis 12,required
R623 T2880 T2879 punct ],12
R624 T2881 T2851 punct .,interact
R625 T2883 T2884 nsubj Lgs,binds
R626 T2885 T2886 det the,repeats
R627 T2886 T2884 dobj repeats,binds
R628 T2887 T2886 amod central,repeats
R629 T2888 T2886 compound armadillo,repeats
R630 T2889 T2886 prep of,repeats
R631 T2890 T2891 compound β,catenin
R632 T2891 T2889 pobj catenin,of
R633 T2892 T2891 punct -,catenin
R634 T2893 T2884 punct ", ",binds
R635 T2894 T2895 mark while,interacts
R636 T2895 T2884 advcl interacts,binds
R637 T2896 T2895 nsubj Pygo,interacts
R638 T2897 T2895 prep with,interacts
R639 T2898 T2897 pobj Lgs,with
R640 T2899 T2895 punct ", ",interacts
R641 T2900 T2895 advcl mediating,interacts
R642 T2901 T2900 dobj activation,mediating
R643 T2902 T2901 prep of,activation
R644 T2903 T2904 compound Wnt,targets
R645 T2904 T2902 pobj targets,of
R646 T2905 T2906 punct [,13
R647 T2906 T2895 parataxis 13,interacts
R648 T2907 T2906 nummod 9,13
R649 T2908 T2906 punct ",",13
R650 T2909 T2906 punct ],13
R651 T2910 T2884 punct .,binds
R652 T2912 T2913 det The,domain
R653 T2913 T2917 nsubjpass domain,required
R654 T2914 T2915 npadvmod N,terminal
R655 T2915 T2913 amod terminal,domain
R656 T2916 T2915 punct -,terminal
R657 T2918 T2913 prep of,domain
R658 T2919 T2918 pobj Pygo,of
R659 T2920 T2917 auxpass is,required
R660 T2921 T2917 prep for,required
R661 T2922 T2923 nmod Wnt,activation
R662 T2923 T2921 pobj activation,for
R663 T2924 T2923 amod transcriptional,activation
R664 T2925 T2917 punct ", ",required
R665 T2926 T2927 mark while,required
R666 T2927 T2917 advcl required,required
R667 T2928 T2929 det the,motif
R668 T2929 T2927 nsubjpass motif,required
R669 T2930 T2929 compound PHD,motif
R670 T2931 T2927 auxpass is,required
R671 T2932 T2927 prep for,required
R672 T2933 T2934 det the,association
R673 T2934 T2932 pobj association,for
R674 T2935 T2934 prep of,association
R675 T2936 T2935 pobj Pygo,of
R676 T2937 T2934 prep with,association
R677 T2938 T2937 pobj Lgs,with
R678 T2939 T2940 punct [,13
R679 T2940 T2927 parataxis 13,required
R680 T2941 T2940 nummod 9,13
R681 T2942 T2940 punct ",",13
R682 T2943 T2940 punct ],13
R683 T2944 T2917 punct .,required
R684 T2946 T2947 advmod Additionally,identified
R685 T2948 T2947 punct ", ",identified
R686 T2949 T2950 det a,signal
R687 T2950 T2947 nsubjpass signal,identified
R688 T2951 T2950 amod putative,signal
R689 T2952 T2950 amod nuclear,signal
R690 T2953 T2950 compound localization,signal
R691 T2954 T2950 punct (,signal
R692 T2955 T2950 appos NLS,signal
R693 T2956 T2947 punct ),identified
R694 T2957 T2947 auxpass was,identified
R695 T2958 T2947 prep within,identified
R696 T2959 T2960 det the,domain
R697 T2960 T2958 pobj domain,within
R698 T2961 T2962 npadvmod N,terminal
R699 T2962 T2960 amod terminal,domain
R700 T2963 T2962 punct -,terminal
R701 T2964 T2960 prep of,domain
R702 T2965 T2964 pobj Pygo,of
R703 T2966 T2947 punct ", ",identified
R704 T2967 T2947 advcl suggesting,identified
R705 T2968 T2969 det a,role
R706 T2969 T2967 dobj role,suggesting
R707 T2970 T2969 amod possible,role
R708 T2971 T2969 prep of,role
R709 T2972 T2973 amod nuclear,importation
R710 T2973 T2971 pobj importation,of
R711 T2974 T2973 prep of,importation
R712 T2975 T2976 compound β,catenin
R713 T2976 T2974 pobj catenin,of
R714 T2977 T2976 punct -,catenin
R715 T2978 T2979 punct [,11
R716 T2979 T2947 parataxis 11,identified
R717 T2980 T2979 nummod 8,11
R718 T2981 T2979 punct ",",11
R719 T2982 T2979 punct ],11
R720 T2983 T2947 punct .,identified
R721 T2985 T2986 nsubj Analyses,indicate
R722 T2987 T2985 prep of,Analyses
R723 T2988 T2989 amod multiple,aspects
R724 T2989 T2987 pobj aspects,of
R725 T2990 T2989 prep of,aspects
R726 T2991 T2992 det the,phenotype
R727 T2992 T2990 pobj phenotype,of
R728 T2993 T2994 compound pygopus,mutant
R729 T2994 T2992 compound mutant,phenotype
R730 T2995 T2996 mark that,dedicated
R731 T2996 T2986 ccomp dedicated,indicate
R732 T2997 T2998 det this,gene
R733 T2998 T2996 nsubjpass gene,dedicated
R734 T2999 T2996 auxpass is,dedicated
R735 T3000 T2996 prep to,dedicated
R736 T3001 T2996 punct ", ",dedicated
R737 T3002 T2996 cc and,dedicated
R738 T3003 T2996 conj required,dedicated
R739 T3004 T3003 prep for,required
R740 T3005 T3003 punct ", ",required
R741 T3006 T3007 amod canonical,signaling
R742 T3007 T3003 conj signaling,required
R743 T3008 T3007 compound Wnt,signaling
R744 T3009 T2996 prep during,dedicated
R745 T3010 T3011 compound Drosophila,development
R746 T3011 T3009 pobj development,during
R747 T3012 T3013 punct [,9
R748 T3013 T2986 parataxis 9,indicate
R749 T3014 T3013 punct ],9
R750 T3015 T2986 punct .,indicate

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2559 0-7 SO_EXT:0000704 denotes Genetic
T2560 19-29 NCBITaxon:7215 denotes Drosophila
T2561 50-57 PR_EXT:Q9V9W8 denotes Pygopus
T2562 59-63 PR_EXT:Pygo denotes Pygo
T2563 65-69 SO_EXT:0000704 denotes gene
T2564 97-120 GO:0060070 denotes canonical Wnt signaling
T2565 129-133 PR_EXT:Pygo denotes Pygo
T2566 138-141 PR_EXT:Q961D9 denotes Lgs
T2567 156-165 PR_EXT:000002198 denotes β-catenin
T2568 177-189 _FRAGMENT denotes formation of
T2569 220-227 GO:0065003 denotes complex
T2570 204-219 GO_EXT:transcription denotes transcriptional
T2571 220-227 GO:0032991 denotes complex
T2572 265-274 PR_EXT:000002198 denotes β-catenin
T2573 282-289 GO:0005634 denotes nucleus
T2574 296-299 PR_EXT:Q961D9 denotes Lgs
T2575 300-305 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binds
T2576 318-327 PR_EXT:P18824 denotes armadillo
T2577 328-335 SO_EXT:sequence_repeat_unit_or_region denotes repeats
T2578 339-348 PR_EXT:000002198 denotes β-catenin
T2579 356-360 PR_EXT:Pygo denotes Pygo
T2580 376-379 PR_EXT:Q961D9 denotes Lgs
T2581 429-439 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes N-terminal
T2582 440-446 SO_EXT:0000417 denotes domain
T2583 450-454 PR_EXT:Pygo denotes Pygo
T2584 475-490 GO_EXT:transcription denotes transcriptional
T2585 517-522 SO_EXT:sequence_or_structure_motif denotes motif
T2586 558-562 PR_EXT:Pygo denotes Pygo
T2587 568-571 PR_EXT:Q961D9 denotes Lgs
T2588 605-612 GO:0005634 denotes nuclear
T2589 605-632 SO_EXT:0001528 denotes nuclear localization signal
T2590 613-625 GO_PATO_EXT:biological_localization_process_or_quality denotes localization
T2591 634-637 SO_EXT:0001528 denotes NLS
T2592 665-675 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes N-terminal
T2593 676-682 SO_EXT:0000417 denotes domain
T2594 686-690 PR_EXT:Pygo denotes Pygo
T2595 722-729 GO:0005634 denotes nuclear
T2596 722-741 GO:0051170 denotes nuclear importation
T2597 745-754 PR_EXT:000002198 denotes β-catenin
T2598 799-806 PR_EXT:Q9V9W8 denotes pygopus
T2599 807-813 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T2600 843-847 SO_EXT:0000704 denotes gene
T2601 883-906 GO:0060070 denotes canonical Wnt signaling
T2602 914-924 NCBITaxon:7215 denotes Drosophila
R396 T2569 T2568 _lexicallyChainedTo complex,formation of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2461 0-7 SO:0000704 denotes Genetic
T2462 19-29 NCBITaxon:7215 denotes Drosophila
T2463 50-57 PR:Q9V9W8 denotes Pygopus
T2464 65-69 SO:0000704 denotes gene
T2465 97-120 GO:0060070 denotes canonical Wnt signaling
T2466 138-141 PR:Q961D9 denotes Lgs
T2467 156-165 PR:000002198 denotes β-catenin
T2468 177-189 _FRAGMENT denotes formation of
T2469 220-227 GO:0065003 denotes complex
T2470 220-227 GO:0032991 denotes complex
T2471 265-274 PR:000002198 denotes β-catenin
T2472 282-289 GO:0005634 denotes nucleus
T2473 296-299 PR:Q961D9 denotes Lgs
T2474 318-327 PR:P18824 denotes armadillo
T2475 339-348 PR:000002198 denotes β-catenin
T2476 376-379 PR:Q961D9 denotes Lgs
T2477 440-446 SO:0000417 denotes domain
T2478 568-571 PR:Q961D9 denotes Lgs
T2479 605-612 GO:0005634 denotes nuclear
T2480 605-632 SO:0001528 denotes nuclear localization signal
T2481 634-637 SO:0001528 denotes NLS
T2482 676-682 SO:0000417 denotes domain
T2483 722-729 GO:0005634 denotes nuclear
T2484 722-741 GO:0051170 denotes nuclear importation
T2485 745-754 PR:000002198 denotes β-catenin
T2486 799-806 PR:Q9V9W8 denotes pygopus
T2487 843-847 SO:0000704 denotes gene
T2488 883-906 GO:0060070 denotes canonical Wnt signaling
T2489 914-924 NCBITaxon:7215 denotes Drosophila
R394 T2469 T2468 _lexicallyChainedTo complex,formation of

2_test

Id Subject Object Predicate Lexical cue
17425782-12163411-8469433 122-123 12163411 denotes 8
17425782-11955446-8469433 122-123 11955446 denotes 8
17425782-12015286-8469433 122-123 12015286 denotes 8
17425782-11988739-8469433 122-123 11988739 denotes 8
17425782-15208637-8469434 291-293 15208637 denotes 12
17425782-11955446-8469435 418-419 11955446 denotes 9
17425782-16169192-8469436 420-422 16169192 denotes 13
17425782-11955446-8469437 573-574 11955446 denotes 9
17425782-16169192-8469438 575-577 16169192 denotes 13
17425782-12163411-8469439 756-757 12163411 denotes 8
17425782-11988739-8469440 758-760 11988739 denotes 11
17425782-11955446-8469441 938-939 11955446 denotes 9