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PMC:1858683 / 29972-30547 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T15403 574-575 . denotes .
T15402 573-574 -RRB- denotes ]
T15401 572-573 CD denotes 8
T15400 571-572 -LRB- denotes [
T15399 569-570 . denotes .
T15398 568-569 '' denotes "
T15397 548-560 NN denotes transduction
T15396 541-547 NN denotes signal
T15395 538-540 NN denotes Wg
T15394 561-568 NN denotes pathway
T15393 534-537 DT denotes the
T15392 531-533 IN denotes in
T15391 511-520 JJ denotes essential
T15390 521-530 NN denotes component
T15389 508-510 DT denotes an
T15388 500-504 NN denotes Pygo
T15387 499-500 `` denotes "
T15386 505-507 VBZ denotes is
T15385 494-498 IN denotes that
T15384 484-493 VBD denotes concluded
T15383 480-483 CC denotes and
T15382 478-480 , denotes ,
T15381 467-478 NN denotes development
T15380 459-466 JJ denotes cardiac
T15379 455-458 CC denotes and
T15378 453-455 , denotes ,
T15377 439-446 JJ denotes nervous
T15376 447-453 NN denotes system
T15375 431-438 JJ denotes central
T15374 429-431 , denotes ,
T15373 417-429 NN denotes constriction
T15372 410-416 NN denotes midgut
T15371 408-410 , denotes ,
T15370 398-408 NN denotes patterning
T15369 390-397 NN denotes cuticle
T15368 387-389 IN denotes on
T15367 378-386 NN denotes mutation
T15366 373-377 NN denotes Pygo
T15365 370-372 IN denotes of
T15364 362-369 NNS denotes effects
T15363 358-361 DT denotes the
T15362 338-348 NNP denotes Drosophila
T15361 335-337 IN denotes in
T15360 349-357 VBD denotes examined
T15359 322-328 JJ denotes second
T15358 329-334 NN denotes study
T15357 320-321 DT denotes A
T15356 319-575 sentence denotes A second study in Drosophila examined the effects of Pygo mutation on cuticle patterning, midgut constriction, central nervous system, and cardiac development, and concluded that "Pygo is an essential component in the Wg signal transduction pathway". [8].
T15355 318-319 . denotes .
T15354 317-318 -RRB- denotes ]
T15353 315-317 CD denotes 10
T15352 314-315 -LRB- denotes [
T15351 299-307 JJ denotes complete
T15350 297-298 DT denotes a
T15349 291-296 NNS denotes cases
T15348 288-290 CD denotes 10
T15347 308-313 NN denotes block
T15346 285-287 IN denotes in
T15345 281-284 CC denotes and
T15344 271-280 NN denotes signaling
T15343 267-270 NN denotes Wnt
T15342 264-266 IN denotes of
T15341 242-253 JJ denotes significant
T15340 254-263 NN denotes reduction
T15339 240-241 DT denotes a
T15338 230-235 EX denotes there
T15337 224-229 NNS denotes cases
T15336 222-223 CD denotes 2
T15335 236-239 VBD denotes was
T15334 219-221 IN denotes In
T15333 218-319 sentence denotes In 2 cases there was a significant reduction of Wnt signaling and in 10 cases a complete block [10].
T15332 217-218 . denotes .
T15331 212-217 NNS denotes discs
T15330 199-202 NN denotes eye
T15329 195-198 CC denotes and
T15328 193-195 , denotes ,
T15327 189-193 NN denotes wing
T15326 187-189 , denotes ,
T15325 203-211 JJ denotes imaginal
T15324 184-187 NN denotes leg
T15323 181-183 IN denotes of
T15322 172-180 NN denotes analysis
T15321 162-171 VBG denotes including
T15320 160-162 , denotes ,
T15319 146-150 VBD denotes were
T15318 138-145 NNS denotes mutants
T15317 133-137 NN denotes Pygo
T15316 130-132 IN denotes in
T15315 120-129 NN denotes signaling
T15314 116-119 NN denotes Wnt
T15313 113-115 IN denotes of
T15312 95-103 JJ denotes distinct
T15311 104-112 NNS denotes measures
T15310 92-94 CD denotes 12
T15309 90-92 , denotes ,
T15308 85-90 NN denotes study
T15307 81-84 CD denotes one
T15306 151-160 VBN denotes performed
T15305 78-80 IN denotes In
T15304 77-218 sentence denotes In one study, 12 distinct measures of Wnt signaling in Pygo mutants were performed, including analysis of leg, wing, and eye imaginal discs.
T15303 76-77 . denotes .
T15302 63-66 NN denotes Wnt
T15301 67-76 NN denotes signaling
T15300 53-62 JJ denotes canonical
T15299 50-52 IN denotes of
T15298 37-40 JJ denotes key
T15297 41-49 NN denotes mediator
T15296 35-36 DT denotes a
T15295 19-26 NN denotes Pygopus
T15294 27-31 NN denotes gene
T15293 15-18 DT denotes the
T15292 13-15 , denotes ,
T15291 3-13 NNP denotes Drosophila
T15290 32-34 VBZ denotes is
T15289 0-2 IN denotes In
R3623 T15289 T15290 prep In,is
R3624 T15291 T15289 pobj Drosophila,In
R3625 T15292 T15290 punct ", ",is
R3626 T15293 T15294 det the,gene
R3627 T15294 T15290 nsubj gene,is
R3628 T15295 T15294 compound Pygopus,gene
R3629 T15296 T15297 det a,mediator
R3630 T15297 T15290 attr mediator,is
R3631 T15298 T15297 amod key,mediator
R3632 T15299 T15297 prep of,mediator
R3633 T15300 T15301 amod canonical,signaling
R3634 T15301 T15299 pobj signaling,of
R3635 T15302 T15301 compound Wnt,signaling
R3636 T15303 T15290 punct .,is
R3637 T15305 T15306 prep In,performed
R3638 T15307 T15308 nummod one,study
R3639 T15308 T15305 pobj study,In
R3640 T15309 T15306 punct ", ",performed
R3641 T15310 T15311 nummod 12,measures
R3642 T15311 T15306 nsubjpass measures,performed
R3643 T15312 T15311 amod distinct,measures
R3644 T15313 T15311 prep of,measures
R3645 T15314 T15315 compound Wnt,signaling
R3646 T15315 T15313 pobj signaling,of
R3647 T15316 T15315 prep in,signaling
R3648 T15317 T15318 compound Pygo,mutants
R3649 T15318 T15316 pobj mutants,in
R3650 T15319 T15306 auxpass were,performed
R3651 T15320 T15306 punct ", ",performed
R3652 T15321 T15306 prep including,performed
R3653 T15322 T15321 pobj analysis,including
R3654 T15323 T15322 prep of,analysis
R3655 T15324 T15325 npadvmod leg,imaginal
R3656 T15325 T15331 amod imaginal,discs
R3657 T15326 T15324 punct ", ",leg
R3658 T15327 T15324 conj wing,leg
R3659 T15328 T15327 punct ", ",wing
R3660 T15329 T15327 cc and,wing
R3661 T15330 T15327 conj eye,wing
R3662 T15331 T15323 pobj discs,of
R3663 T15332 T15306 punct .,performed
R3664 T15334 T15335 prep In,was
R3665 T15336 T15337 nummod 2,cases
R3666 T15337 T15334 pobj cases,In
R3667 T15338 T15335 expl there,was
R3668 T15339 T15340 det a,reduction
R3669 T15340 T15335 attr reduction,was
R3670 T15341 T15340 amod significant,reduction
R3671 T15342 T15340 prep of,reduction
R3672 T15343 T15344 compound Wnt,signaling
R3673 T15344 T15342 pobj signaling,of
R3674 T15345 T15335 cc and,was
R3675 T15346 T15347 prep in,block
R3676 T15347 T15335 conj block,was
R3677 T15348 T15349 nummod 10,cases
R3678 T15349 T15346 pobj cases,in
R3679 T15350 T15347 det a,block
R3680 T15351 T15347 amod complete,block
R3681 T15352 T15353 punct [,10
R3682 T15353 T15347 parataxis 10,block
R3683 T15354 T15353 punct ],10
R3684 T15355 T15347 punct .,block
R3685 T15357 T15358 det A,study
R3686 T15358 T15360 nsubj study,examined
R3687 T15359 T15358 amod second,study
R3688 T15361 T15358 prep in,study
R3689 T15362 T15361 pobj Drosophila,in
R3690 T15363 T15364 det the,effects
R3691 T15364 T15360 dobj effects,examined
R3692 T15365 T15364 prep of,effects
R3693 T15366 T15367 compound Pygo,mutation
R3694 T15367 T15365 pobj mutation,of
R3695 T15368 T15364 prep on,effects
R3696 T15369 T15370 compound cuticle,patterning
R3697 T15370 T15368 pobj patterning,on
R3698 T15371 T15370 punct ", ",patterning
R3699 T15372 T15373 compound midgut,constriction
R3700 T15373 T15370 conj constriction,patterning
R3701 T15374 T15373 punct ", ",constriction
R3702 T15375 T15376 amod central,system
R3703 T15376 T15373 conj system,constriction
R3704 T15377 T15376 amod nervous,system
R3705 T15378 T15376 punct ", ",system
R3706 T15379 T15376 cc and,system
R3707 T15380 T15381 amod cardiac,development
R3708 T15381 T15376 conj development,system
R3709 T15382 T15360 punct ", ",examined
R3710 T15383 T15360 cc and,examined
R3711 T15384 T15360 conj concluded,examined
R3712 T15385 T15386 mark that,is
R3713 T15386 T15384 ccomp is,concluded
R3714 T15387 T15386 punct """",is
R3715 T15388 T15386 nsubj Pygo,is
R3716 T15389 T15390 det an,component
R3717 T15390 T15386 attr component,is
R3718 T15391 T15390 amod essential,component
R3719 T15392 T15390 prep in,component
R3720 T15393 T15394 det the,pathway
R3721 T15394 T15392 pobj pathway,in
R3722 T15395 T15394 compound Wg,pathway
R3723 T15396 T15397 compound signal,transduction
R3724 T15397 T15394 compound transduction,pathway
R3725 T15398 T15384 punct """",concluded
R3726 T15399 T15384 punct .,concluded
R3727 T15400 T15401 punct [,8
R3728 T15401 T15384 parataxis 8,concluded
R3729 T15402 T15401 punct ],8
R3730 T15403 T15360 punct .,examined

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T15072 541-568 GO_EXT:cell_communication_or_signaling_or_signal_transduction denotes signal transduction pathway
T15071 538-540 PR_EXT:000017435 denotes Wg
T15070 500-504 PR_EXT:Pygo denotes Pygo
T15069 459-478 GO:0007507 denotes cardiac development
T15068 459-466 UBERON:0000948 denotes cardiac
T15067 467-478 GO:0007417 denotes development
T15066 431-453 _FRAGMENT denotes central nervous system
T15065 431-453 UBERON:0001017 denotes central nervous system
T15064 410-416 UBERON:0001045 denotes midgut
T15063 398-408 GO_PATO_EXT:biological_patterning_process_or_quality denotes patterning
T15062 390-397 UBERON:0001002 denotes cuticle
T15061 378-386 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T15060 373-377 PR_EXT:Pygo denotes Pygo
T15059 338-348 NCBITaxon:7215 denotes Drosophila
T15058 267-280 GO:0016055 denotes Wnt signaling
T15057 203-217 UBERON:0000939 denotes imaginal discs
T15056 199-202 UBERON:0000970 denotes eye
T15055 189-193 UBERON:0000023 denotes wing
T15054 184-187 UBERON:0005895 denotes leg
T15053 138-145 SO_EXT:sequence_altered_entity denotes mutants
T15052 133-137 PR_EXT:Pygo denotes Pygo
T15051 116-129 GO:0016055 denotes Wnt signaling
T15050 53-76 GO:0060070 denotes canonical Wnt signaling
T15049 27-31 SO_EXT:0000704 denotes gene
T15048 19-26 PR_EXT:Q9V9W8 denotes Pygopus
T15047 3-13 NCBITaxon:7215 denotes Drosophila
R3620 T15067 T15066 _lexicallyChainedTo development,central nervous system

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T14884 538-540 PR:000017435 denotes Wg
T14883 459-478 GO:0007507 denotes cardiac development
T14882 459-466 UBERON:0000948 denotes cardiac
T14881 467-478 GO:0007417 denotes development
T14880 431-453 _FRAGMENT denotes central nervous system
T14879 431-453 UBERON:0001017 denotes central nervous system
T14878 410-416 UBERON:0001045 denotes midgut
T14877 390-397 UBERON:0001002 denotes cuticle
T14876 338-348 NCBITaxon:7215 denotes Drosophila
T14875 267-280 GO:0016055 denotes Wnt signaling
T14874 203-217 UBERON:0000939 denotes imaginal discs
T14873 199-202 UBERON:0000970 denotes eye
T14872 189-193 UBERON:0000023 denotes wing
T14871 184-187 UBERON:0005895 denotes leg
T14870 116-129 GO:0016055 denotes Wnt signaling
T14869 53-76 GO:0060070 denotes canonical Wnt signaling
T14868 27-31 SO:0000704 denotes gene
T14867 19-26 PR:Q9V9W8 denotes Pygopus
T14866 3-13 NCBITaxon:7215 denotes Drosophila
R3617 T14881 T14880 _lexicallyChainedTo development,central nervous system

2_test

Id Subject Object Predicate Lexical cue
17425782-12015286-8469472 315-317 12015286 denotes 10
17425782-12163411-8469473 572-573 12163411 denotes 8