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PMC:1858683 / 1921-2447 JSONTXT

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Id Subject Object Predicate Lexical cue
T1285 0-3 DT denotes The
T1286 22-27 NNS denotes genes
T1287 4-13 JJ denotes mammalian
T1288 14-21 NN denotes Pygopus
T1289 32-40 VBN denotes required
T1290 28-31 VBP denotes are
T1291 41-44 IN denotes for
T1292 45-51 JJ denotes normal
T1293 62-75 NN denotes morphogenesis
T1294 52-61 NN denotes branching
T1295 76-78 IN denotes of
T1296 79-82 DT denotes the
T1297 92-95 NN denotes bud
T1298 83-91 JJ denotes ureteric
T1299 96-102 IN denotes during
T1300 103-109 NN denotes kidney
T1301 110-121 NN denotes development
T1302 121-122 . denotes .
T1303 122-319 sentence denotes Nevertheless, the relatively mild phenotype observed in the kidney, as well as other organ systems, indicates a striking evolutionary divergence of Pygopus function between mammals and Drosophila.
T1304 123-135 RB denotes Nevertheless
T1305 223-232 VBZ denotes indicates
T1306 135-137 , denotes ,
T1307 137-140 DT denotes the
T1308 157-166 NN denotes phenotype
T1309 141-151 RB denotes relatively
T1310 152-156 JJ denotes mild
T1311 167-175 VBN denotes observed
T1312 176-178 IN denotes in
T1313 179-182 DT denotes the
T1314 183-189 NN denotes kidney
T1315 189-191 , denotes ,
T1316 191-193 RB denotes as
T1317 199-201 IN denotes as
T1318 194-198 RB denotes well
T1319 202-207 JJ denotes other
T1320 214-221 NNS denotes systems
T1321 208-213 NN denotes organ
T1322 221-223 , denotes ,
T1323 233-234 DT denotes a
T1324 257-267 NN denotes divergence
T1325 235-243 JJ denotes striking
T1326 244-256 JJ denotes evolutionary
T1327 268-270 IN denotes of
T1328 271-278 NN denotes Pygopus
T1329 279-287 NN denotes function
T1330 288-295 IN denotes between
T1331 296-303 NNS denotes mammals
T1332 304-307 CC denotes and
T1333 308-318 NNP denotes Drosophila
T1334 318-319 . denotes .
T1335 319-526 sentence denotes In mammals, the Pygo1/Pygo2 genes are not absolutely required for canonical Wnt signaling in most developing systems, but rather function as quantitative transducers, or modulators, of Wnt signal intensity.
T1336 320-322 IN denotes In
T1337 373-381 VBN denotes required
T1338 323-330 NNS denotes mammals
T1339 330-332 , denotes ,
T1340 332-335 DT denotes the
T1341 348-353 NNS denotes genes
T1342 336-341 NN denotes Pygo1
T1343 342-347 NN denotes Pygo2
T1344 341-342 HYPH denotes /
T1345 354-357 VBP denotes are
T1346 358-361 RB denotes not
T1347 362-372 RB denotes absolutely
T1348 382-385 IN denotes for
T1349 386-395 JJ denotes canonical
T1350 400-409 NN denotes signaling
T1351 396-399 NN denotes Wnt
T1352 410-412 IN denotes in
T1353 413-417 JJS denotes most
T1354 429-436 NNS denotes systems
T1355 418-428 VBG denotes developing
T1356 436-438 , denotes ,
T1357 438-441 CC denotes but
T1358 442-448 RB denotes rather
T1359 449-457 VBP denotes function
T1360 458-460 IN denotes as
T1361 461-473 JJ denotes quantitative
T1362 474-485 NNS denotes transducers
T1363 485-487 , denotes ,
T1364 487-489 CC denotes or
T1365 490-500 NNS denotes modulators
T1366 500-502 , denotes ,
T1367 502-504 IN denotes of
T1368 505-508 NN denotes Wnt
T1369 509-515 NN denotes signal
T1370 516-525 NN denotes intensity
T1371 525-526 . denotes .
R312 T1285 T1286 det The,genes
R313 T1286 T1289 nsubjpass genes,required
R314 T1287 T1286 amod mammalian,genes
R315 T1288 T1286 compound Pygopus,genes
R316 T1290 T1289 auxpass are,required
R317 T1291 T1289 prep for,required
R318 T1292 T1293 amod normal,morphogenesis
R319 T1293 T1291 pobj morphogenesis,for
R320 T1294 T1293 compound branching,morphogenesis
R321 T1295 T1293 prep of,morphogenesis
R322 T1296 T1297 det the,bud
R323 T1297 T1295 pobj bud,of
R324 T1298 T1297 amod ureteric,bud
R325 T1299 T1293 prep during,morphogenesis
R326 T1300 T1301 compound kidney,development
R327 T1301 T1299 pobj development,during
R328 T1302 T1289 punct .,required
R329 T1304 T1305 advmod Nevertheless,indicates
R330 T1306 T1305 punct ", ",indicates
R331 T1307 T1308 det the,phenotype
R332 T1308 T1305 nsubj phenotype,indicates
R333 T1309 T1310 advmod relatively,mild
R334 T1310 T1308 amod mild,phenotype
R335 T1311 T1308 acl observed,phenotype
R336 T1312 T1311 prep in,observed
R337 T1313 T1314 det the,kidney
R338 T1314 T1312 pobj kidney,in
R339 T1315 T1314 punct ", ",kidney
R340 T1316 T1317 advmod as,as
R341 T1317 T1314 cc as,kidney
R342 T1318 T1317 advmod well,as
R343 T1319 T1320 amod other,systems
R344 T1320 T1314 conj systems,kidney
R345 T1321 T1320 compound organ,systems
R346 T1322 T1305 punct ", ",indicates
R347 T1323 T1324 det a,divergence
R348 T1324 T1305 dobj divergence,indicates
R349 T1325 T1324 amod striking,divergence
R350 T1326 T1324 amod evolutionary,divergence
R351 T1327 T1324 prep of,divergence
R352 T1328 T1329 compound Pygopus,function
R353 T1329 T1327 pobj function,of
R354 T1330 T1324 prep between,divergence
R355 T1331 T1330 pobj mammals,between
R356 T1332 T1331 cc and,mammals
R357 T1333 T1331 conj Drosophila,mammals
R358 T1334 T1305 punct .,indicates
R359 T1336 T1337 prep In,required
R360 T1338 T1336 pobj mammals,In
R361 T1339 T1337 punct ", ",required
R362 T1340 T1341 det the,genes
R364 T1342 T1343 compound Pygo1,Pygo2
R365 T1343 T1341 compound Pygo2,genes
R366 T1344 T1343 punct /,Pygo2
R367 T1345 T1337 auxpass are,required
R368 T1346 T1337 neg not,required
R369 T1347 T1337 advmod absolutely,required
R370 T1348 T1337 prep for,required
R371 T1349 T1350 amod canonical,signaling
R372 T1350 T1348 pobj signaling,for
R373 T1351 T1350 compound Wnt,signaling
R374 T1352 T1337 prep in,required
R375 T1353 T1354 amod most,systems
R376 T1354 T1352 pobj systems,in
R377 T1355 T1354 amod developing,systems
R378 T1356 T1337 punct ", ",required
R379 T1357 T1337 cc but,required
R380 T1358 T1357 advmod rather,but
R381 T1359 T1337 conj function,required
R382 T1360 T1359 prep as,function
R383 T1361 T1362 amod quantitative,transducers
R384 T1362 T1360 pobj transducers,as
R385 T1363 T1362 punct ", ",transducers
R386 T1364 T1362 cc or,transducers
R387 T1365 T1362 conj modulators,transducers
R388 T1366 T1362 punct ", ",transducers
R389 T1367 T1362 prep of,transducers
R390 T1368 T1369 compound Wnt,signal
R391 T1369 T1370 compound signal,intensity
R392 T1370 T1367 pobj intensity,of
R393 T1371 T1337 punct .,required
R363 T1341 T1337 nsubjpass genes,required

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T920 4-13 NCBITaxon:40674 denotes mammalian
T921 14-21 PR_EXT:Q9V9W8 denotes Pygopus
T922 22-27 SO_EXT:0000704 denotes genes
T923 52-78 _FRAGMENT denotes branching morphogenesis of
T924 83-95 GO:0001658 denotes ureteric bud
T925 83-95 UBERON:0000084 denotes ureteric bud
T926 103-109 UBERON:0002113 denotes kidney
T927 103-121 GO:0001822 denotes kidney development
T928 183-189 UBERON:0002113 denotes kidney
T929 208-221 UBERON:0000467 denotes organ systems
T930 271-278 PR_EXT:Q9V9W8 denotes Pygopus
T931 296-303 NCBITaxon:40674 denotes mammals
T932 308-318 NCBITaxon:7215 denotes Drosophila
T933 323-330 NCBITaxon:40674 denotes mammals
T934 336-341 PR_EXT:000013523 denotes Pygo1
T935 342-347 PR_EXT:000013524 denotes Pygo2
T936 348-353 SO_EXT:0000704 denotes genes
T937 386-409 GO:0060070 denotes canonical Wnt signaling
T938 429-436 UBERON:0000467 denotes systems
T939 474-485 _FRAGMENT denotes transducers
T940 502-504 _FRAGMENT denotes of
T941 509-525 GO_EXT:0004871 denotes signal intensity
T942 490-500 GO_EXT:regulator denotes modulators
R4 T924 T923 _lexicallyChainedTo ureteric bud,branching morphogenesis of
R5 T940 T939 _lexicallyChainedTo of,transducers
R6 T941 T940 _lexicallyChainedTo signal intensity,of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T828 296-303 NCBITaxon:40674 denotes mammals
T829 308-318 NCBITaxon:7215 denotes Drosophila
T830 323-330 NCBITaxon:40674 denotes mammals
T831 336-341 PR:000013523 denotes Pygo1
T832 342-347 PR:000013524 denotes Pygo2
T833 348-353 SO:0000704 denotes genes
T817 4-13 NCBITaxon:40674 denotes mammalian
T818 14-21 PR:Q9V9W8 denotes Pygopus
T819 22-27 SO:0000704 denotes genes
T820 52-78 _FRAGMENT denotes branching morphogenesis of
T821 83-95 GO:0001658 denotes ureteric bud
T822 83-95 UBERON:0000084 denotes ureteric bud
T823 103-109 UBERON:0002113 denotes kidney
T824 103-121 GO:0001822 denotes kidney development
T825 183-189 UBERON:0002113 denotes kidney
T826 208-221 UBERON:0000467 denotes organ systems
T827 271-278 PR:Q9V9W8 denotes Pygopus
T834 386-409 GO:0060070 denotes canonical Wnt signaling
T835 429-436 UBERON:0000467 denotes systems
R2 T821 T820 _lexicallyChainedTo ureteric bud,branching morphogenesis of