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PMC:1858683 / 15403-16000 JSONTXT

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Id Subject Object Predicate Lexical cue
T9590 594-595 NN denotes C
T9589 593-594 SYM denotes –
T9588 584-590 NN denotes Figure
T9587 591-593 NN denotes 6A
T9586 583-584 -LRB- denotes (
T9585 563-571 NN denotes reporter
T9584 558-559 HYPH denotes -
T9583 559-562 NN denotes gal
T9582 555-558 NN denotes BAT
T9581 548-554 JJ denotes absent
T9580 544-547 RB denotes not
T9579 540-543 CC denotes but
T9578 572-582 NN denotes expression
T9577 532-539 VBN denotes reduced
T9576 525-531 VBD denotes showed
T9575 519-524 WDT denotes which
T9574 517-519 , denotes ,
T9573 504-507 NN denotes bud
T9572 495-503 JJ denotes ureteric
T9571 508-517 NN denotes outgrowth
T9570 491-494 DT denotes the
T9569 488-490 IN denotes to
T9568 483-487 NN denotes rise
T9567 478-482 VB denotes give
T9566 474-477 CC denotes and
T9565 472-474 , denotes ,
T9564 465-472 RB denotes however
T9563 463-465 , denotes ,
T9562 455-458 VBD denotes did
T9561 442-449 JJ denotes nephric
T9560 450-454 NN denotes duct
T9559 438-441 DT denotes the
T9558 436-438 , denotes ,
T9557 429-436 NNS denotes mutants
T9556 423-424 HYPH denotes -
T9555 417-423 JJ denotes double
T9554 424-428 JJ denotes null
T9553 410-411 HYPH denotes /
T9552 411-416 NN denotes Pygo2
T9551 405-410 NN denotes Pygo1
T9550 459-463 VB denotes form
T9549 402-404 IN denotes In
T9548 401-597 sentence denotes In Pygo1/Pygo2 double-null mutants, the nephric duct did form, however, and give rise to the ureteric bud outgrowth, which showed reduced but not absent BAT-gal reporter expression (Figure 6A–C).
T9547 400-401 . denotes .
T9546 399-400 -RRB- denotes )
T9545 398-399 NN denotes C
T9544 397-398 SYM denotes –
T9543 388-394 NN denotes Figure
T9542 395-397 NN denotes 6A
T9541 387-388 -LRB- denotes (
T9540 376-386 NN denotes expression
T9539 369-375 JJ denotes strong
T9538 350-361 NNS denotes littermates
T9537 342-349 NN denotes control
T9536 362-368 VBD denotes showed
T9535 336-341 IN denotes while
T9534 334-336 , denotes ,
T9533 322-329 JJ denotes nephric
T9532 330-334 NN denotes duct
T9531 318-321 DT denotes the
T9530 315-317 IN denotes in
T9529 304-314 NN denotes expression
T9528 295-303 NN denotes reporter
T9527 292-294 IN denotes of
T9526 284-291 NN denotes absence
T9525 281-283 DT denotes an
T9524 274-280 VBD denotes showed
T9523 260-265 NN denotes E10.5
T9522 254-255 HYPH denotes -
T9521 248-254 JJ denotes double
T9520 255-259 JJ denotes null
T9519 241-242 HYPH denotes /
T9518 242-247 NN denotes Pygo2
T9517 236-241 NN denotes Pygo1
T9516 232-235 CC denotes and
T9515 266-273 NNS denotes embryos
T9514 221-226 NN denotes Pygo2
T9513 227-231 JJ denotes null
T9512 216-220 CC denotes Both
T9511 215-401 sentence denotes Both Pygo2 null and Pygo1/Pygo2 double-null E10.5 embryos showed an absence of reporter expression in the nephric duct, while control littermates showed strong expression (Figure 6A–C).
T9510 214-215 . denotes .
T9509 202-209 JJ denotes nephric
T9508 210-214 NN denotes duct
T9507 198-201 DT denotes the
T9506 195-197 IN denotes in
T9505 181-184 NN denotes Wnt
T9504 185-194 NN denotes signaling
T9503 171-180 JJ denotes canonical
T9502 167-170 IN denotes for
T9501 155-157 VBZ denotes is
T9500 144-149 NN denotes Pygo2
T9499 150-154 NN denotes gene
T9498 140-143 DT denotes the
T9497 158-166 VBN denotes required
T9496 135-139 IN denotes that
T9495 125-134 VBD denotes suggested
T9494 117-124 NNS denotes results
T9493 113-116 DT denotes The
T9492 112-215 sentence denotes The results suggested that the Pygo2 gene is required for canonical Wnt signaling in the nephric duct.
T9491 111-112 . denotes .
T9490 104-111 NNS denotes mutants
T9489 99-103 NN denotes Pygo
T9488 96-98 IN denotes of
T9487 78-88 JJ denotes urogenital
T9486 67-77 VBG denotes developing
T9485 89-95 NN denotes system
T9455 8-9 NNS denotes e
T9454 8-9 sentence denotes e
T9453 5-6 NN denotes s
T9452 6-7 NN denotes o
T9451 3-5 DT denotes al
T9450 2-8 sentence denotes also
T9449 1-2 NNS denotes e
T9448 0-1 NN denotes W
T9447 0-2 sentence denotes We
T9468 27-31 sentence denotes port
T9467 20-21 HYPH denotes -
T9466 21-24 NN denotes gal
T9465 17-20 NN denotes BAT
T9464 25-27 NN denotes re
T9463 15-16 JJ denotes d
T9462 14-15 NNS denotes e
T9461 13-14 NN denotes n
T9460 13-27 sentence denotes ned BAT-gal re
T9459 11-13 NNS denotes mi
T9458 10-11 JJ denotes a
T9457 9-10 NN denotes x
T9456 9-13 sentence denotes xami
T9484 63-66 DT denotes the
T9483 60-62 IN denotes in
T9482 53-59 NN denotes detail
T9481 48-52 JJR denotes more
T9480 45-47 IN denotes in
T9479 39-44 NN denotes ssion
T9478 36-39 NN denotes pre
T9477 35-36 VBD denotes x
T9476 35-112 sentence denotes xpression in more detail in the developing urogenital system of Pygo mutants.
T9475 34-35 DT denotes e
T9474 31-32 NNS denotes e
T9473 32-33 VBD denotes r
T9472 31-35 sentence denotes er e
T9471 30-31 NN denotes t
T9470 29-30 JJ denotes r
T9469 27-29 NN denotes po
T9592 596-597 . denotes .
T9591 595-596 -RRB- denotes )
R1938 T9453 T9452 compound s,o
R1984 T9494 T9495 nsubj results,suggested
R1986 T9496 T9497 mark that,required
R1987 T9497 T9495 ccomp required,suggested
R1989 T9498 T9499 det the,gene
R1990 T9499 T9497 nsubjpass gene,required
R1991 T9500 T9499 compound Pygo2,gene
R1993 T9501 T9497 auxpass is,required
R1994 T9502 T9497 prep for,required
R1995 T9503 T9504 amod canonical,signaling
R1997 T9504 T9502 pobj signaling,for
R1998 T9505 T9504 compound Wnt,signaling
R2000 T9506 T9504 prep in,signaling
R2001 T9507 T9508 det the,duct
R2002 T9508 T9506 pobj duct,in
R2005 T9509 T9508 amod nephric,duct
R2006 T9510 T9495 punct .,suggested
R2008 T9512 T9513 preconj Both,null
R2009 T9513 T9515 amod null,embryos
R2011 T9514 T9513 npadvmod Pygo2,null
R2012 T9515 T9524 nsubj embryos,showed
R2013 T9516 T9513 cc and,null
R2015 T9517 T9518 compound Pygo1,Pygo2
R2016 T9518 T9520 npadvmod Pygo2,null
R2017 T9519 T9518 punct /,Pygo2
R2019 T9520 T9513 conj null,null
R2020 T9521 T9520 amod double,null
R2021 T9522 T9520 punct -,null
R2023 T9523 T9515 compound E10.5,embryos
R2024 T9525 T9526 det an,absence
R2026 T9526 T9524 dobj absence,showed
R2027 T9527 T9526 prep of,absence
R2028 T9528 T9529 compound reporter,expression
R2030 T9529 T9527 pobj expression,of
R2031 T9530 T9526 prep in,absence
R2032 T9531 T9532 det the,duct
R2034 T9532 T9530 pobj duct,in
R2035 T9533 T9532 amod nephric,duct
R2036 T9534 T9524 punct ", ",showed
R2038 T9535 T9536 mark while,showed
R2039 T9536 T9524 advcl showed,showed
R2040 T9537 T9538 compound control,littermates
R2041 T9538 T9536 nsubj littermates,showed
R2042 T9539 T9540 amod strong,expression
R2043 T9540 T9536 dobj expression,showed
R2044 T9541 T9542 punct (,6A
R2045 T9542 T9524 parataxis 6A,showed
R2046 T9543 T9542 compound Figure,6A
R2047 T9544 T9545 punct –,C
R2048 T9545 T9542 prep C,6A
R2049 T9546 T9542 punct ),6A
R2051 T9547 T9524 punct .,showed
R2052 T9549 T9550 prep In,form
R2053 T9551 T9552 compound Pygo1,Pygo2
R2054 T9552 T9554 npadvmod Pygo2,null
R2055 T9553 T9552 punct /,Pygo2
R2056 T9554 T9557 amod null,mutants
R2057 T9555 T9554 amod double,null
R2058 T9556 T9554 punct -,null
R2059 T9557 T9549 pobj mutants,In
R2060 T9558 T9550 punct ", ",form
R2061 T9559 T9560 det the,duct
R2062 T9560 T9550 nsubj duct,form
R2063 T9561 T9560 amod nephric,duct
R2064 T9562 T9550 aux did,form
R2065 T9563 T9550 punct ", ",form
R2066 T9564 T9550 advmod however,form
R2067 T9565 T9550 punct ", ",form
R2068 T9566 T9550 cc and,form
R2069 T9567 T9550 conj give,form
R2070 T9568 T9567 dobj rise,give
R2071 T9569 T9567 prep to,give
R2072 T9570 T9571 det the,outgrowth
R2073 T9571 T9569 pobj outgrowth,to
R2074 T9572 T9573 amod ureteric,bud
R2075 T9573 T9571 compound bud,outgrowth
R2076 T9574 T9571 punct ", ",outgrowth
R2078 T9575 T9576 dep which,showed
R2079 T9576 T9571 relcl showed,outgrowth
R2080 T9577 T9578 amod reduced,expression
R2082 T9579 T9577 cc but,reduced
R2083 T9580 T9579 neg not,but
R1948 T9465 T9466 compound BAT,gal
R1949 T9466 T9464 compound gal,re
R1950 T9467 T9466 punct -,gal
R1959 T9478 T9479 compound pre,ssion
R1960 T9479 T9477 dobj ssion,x
R1962 T9480 T9477 prep in,x
R1963 T9481 T9482 amod more,detail
R1964 T9482 T9480 pobj detail,in
R1966 T9483 T9477 prep in,x
R1967 T9484 T9485 det the,system
R1970 T9485 T9483 pobj system,in
R1972 T9486 T9485 amod developing,system
R1973 T9487 T9485 amod urogenital,system
R1975 T9488 T9485 prep of,system
R1976 T9489 T9490 compound Pygo,mutants
R1977 T9490 T9488 pobj mutants,of
R1979 T9491 T9477 punct .,x
R1981 T9493 T9494 det The,results
R2029 T9591 T9587 punct ),6A
R2033 T9592 T9550 punct .,form
R2081 T9578 T9576 dobj expression,showed
R2084 T9581 T9577 conj absent,reduced
R2085 T9582 T9583 compound BAT,gal
R2086 T9583 T9585 compound gal,reporter
R2087 T9584 T9583 punct -,gal
R2088 T9585 T9578 compound reporter,expression
R2089 T9586 T9587 punct (,6A
R2090 T9587 T9576 parataxis 6A,showed
R2091 T9588 T9587 compound Figure,6A
R2092 T9589 T9590 punct –,C
R2094 T9590 T9587 prep C,6A

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9040 8-9 UBERON:0000922 denotes e
T9039 5-6 SO_EXT:0000902 denotes s
T9038 1-2 UBERON:0000922 denotes e
T9037 0-1 GO:0060070 denotes W
T9059 227-231 SO_EXT:sequence_nullness denotes null
T9058 221-226 PR_EXT:000013524 denotes Pygo2
T9057 202-214 UBERON:0009201 denotes nephric duct
T9056 171-194 GO:0060070 denotes canonical Wnt signaling
T9055 150-154 SO_EXT:0000704 denotes gene
T9054 144-149 PR_EXT:000013524 denotes Pygo2
T9053 104-111 SO_EXT:sequence_altered_entity denotes mutants
T9052 99-103 PR_EXT:Pygo denotes Pygo
T9051 78-95 UBERON:0004122 denotes urogenital system
T9050 39-44 GO:0010467 denotes ssion
T9049 30-31 GO:0060070 denotes t
T9048 27-29 GO:0010467 denotes po
T9047 25-27 GO:0010467 denotes re
T9046 21-24 GO_EXT:0015925 denotes gal
T9045 15-16 SO_EXT:wild_type_entity_or_quality denotes d
T9044 14-15 SO_EXT:0001023 denotes e
T9043 13-14 SO_EXT:sequence_alteration_entity_or_process denotes n
T9042 11-13 UBERON:0002329 denotes mi
T9041 9-10 GO:0010467 denotes x
T9074 572-582 GO:0010467 denotes expression
T9073 559-562 GO_EXT:0015925 denotes gal
T9072 495-507 UBERON:0000084 denotes ureteric bud
T9071 442-454 UBERON:0009201 denotes nephric duct
T9070 429-436 SO_EXT:sequence_altered_entity denotes mutants
T9069 424-428 SO_EXT:sequence_nullness denotes null
T9068 411-416 PR_EXT:000013524 denotes Pygo2
T9067 405-410 PR_EXT:000013523 denotes Pygo1
T9066 376-386 GO:0010467 denotes expression
T9065 322-334 UBERON:0009201 denotes nephric duct
T9064 304-314 GO:0010467 denotes expression
T9063 266-273 UBERON:0000922 denotes embryos
T9062 255-259 SO_EXT:sequence_nullness denotes null
T9061 242-247 PR_EXT:000013524 denotes Pygo2
T9060 236-241 PR_EXT:000013523 denotes Pygo1

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T8850 442-454 UBERON:0009201 denotes nephric duct
T8849 411-416 PR:000013524 denotes Pygo2
T8848 405-410 PR:000013523 denotes Pygo1
T8847 376-386 GO:0010467 denotes expression
T8846 322-334 UBERON:0009201 denotes nephric duct
T8845 304-314 GO:0010467 denotes expression
T8843 242-247 PR:000013524 denotes Pygo2
T8842 236-241 PR:000013523 denotes Pygo1
T8841 221-226 PR:000013524 denotes Pygo2
T8840 202-214 UBERON:0009201 denotes nephric duct
T8839 171-194 GO:0060070 denotes canonical Wnt signaling
T8838 150-154 SO:0000704 denotes gene
T8837 144-149 PR:000013524 denotes Pygo2
T8836 78-95 UBERON:0004122 denotes urogenital system
T8835 39-44 GO:0010467 denotes ssion
T8834 30-31 GO:0060070 denotes t
T8833 27-29 GO:0010467 denotes po
T8832 25-27 GO:0010467 denotes re
T8831 14-15 SO:0001023 denotes e
T8830 11-13 UBERON:0002329 denotes mi
T8844 266-273 UBERON:0000922 denotes embryos
T8829 9-10 GO:0010467 denotes x
T8828 8-9 UBERON:0000922 denotes e
T8827 5-6 SO:0000902 denotes s
T8826 1-2 UBERON:0000922 denotes e
T8825 0-1 GO:0060070 denotes W
T8852 572-582 GO:0010467 denotes expression
T8851 495-507 UBERON:0000084 denotes ureteric bud