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polyclonal antibodies to DMRT7 were raised against a purified fusion protein containing glutathione-S-transferase (GST) fused to the C-terminal 279 amino acids of DMRT7. Antibodies to GST were removed by GST-affigel 10 chromatography and the antiserum was then purified by GST-DMRT7-affigel 15 chromatography. DMRT7 antibody was used at 1:200 dilution with a goat anti-rabbit secondary antibody (Molecular Probes, http://www.invitrogen.com) at 1:200 dilution. Other primary antibodies used for immunofluorescence were rat anti-GATA1 (1:200, Santa Cruz Biotechnology, http://www.scbt.com, sc-265), goat anti-GATA4 (1:200, Santa Cruz Biotechnology, sc-1237), rat anti-TRA98 (1:200, gift of H. Tanaka and Y. Nishimune), rat anti-BC7 (1:50, gift of H. Tanaka and Y. Nishimune), rat anti-TRA369 (1:200, gift of H. Tanaka and Y. Nishimune), rabbit anti-RAD51 (1:600 Calbiochem, http://www.calbiochem.com, PC130), mouse anti-GMP-1/SUMO-1 (1:200, Zymed, http://invitrogen.com, 33–2400), rabbit anti-phospho-H2AX (Ser139) (1:200, Upstate, http://www.millipore.com, 01–164), mouse anti-phospho-H2AX (1:200, Upstate, 05–636), mouse anti-SYCP3 (1:200, Abcam, http://www.abcam.com, ab12452), rabbit anti-HP1β (1:100, Abcam, ab10478), rabbit anti-H3-2meK9 (1:100, Upstate, 07–441), rabbit anti-H3-3meK9 (1:200, Upstate, 07–442), rabbit anti-AR (N-20) (1:200, Santa Cruz Biotechnology, sc-816), and mouse anti-αSMA clone 1A4 (1:800, Sigma, http://www.sigmaaldrich.com, A2547). Secondary antibodies used were goat anti-rabbit Alexa 488, goat anti-rabbit Alexa 594, goat anti-rat Alexa 594, and goat anti-mouse Alexa 488 (Molecular Probes) used at 1:250. Donkey anti-goat FITC (Jackson ImmunoResearch Laboratories, http://www.jacksonimmuno.com) and donkey anti-rabbit Texas Red (Jackson) were used at 1:50 according to the manufacturer's instructions."}

    craft-ca-core-dev

    {"project":"craft-ca-core-dev","denotations":[{"id":"T26386","span":{"begin":1512,"end":1516},"obj":"NCBITaxon:9925"},{"id":"T26387","span":{"begin":1522,"end":1528},"obj":"NCBITaxon:9986"},{"id":"T26388","span":{"begin":1529,"end":1538},"obj":"CHEBI:52661"},{"id":"T26389","span":{"begin":1540,"end":1544},"obj":"NCBITaxon:9925"},{"id":"T26390","span":{"begin":1550,"end":1556},"obj":"NCBITaxon:9986"},{"id":"T26338","span":{"begin":0,"end":10},"obj":"GO:0042571"},{"id":"T26339","span":{"begin":12,"end":18},"obj":"NCBITaxon:9986"},{"id":"T26340","span":{"begin":30,"end":40},"obj":"GO:0042571"},{"id":"T26341","span":{"begin":44,"end":49},"obj":"PR:000006549"},{"id":"T26342","span":{"begin":107,"end":118},"obj":"CHEBI:16856"},{"id":"T26343","span":{"begin":152,"end":153},"obj":"CHEBI:18245"},{"id":"T26344","span":{"begin":182,"end":187},"obj":"PR:000006549"},{"id":"T26345","span":{"begin":189,"end":199},"obj":"GO:0042571"},{"id":"T26346","span":{"begin":265,"end":270},"obj":"UBERON:0001977"},{"id":"T26347","span":{"begin":296,"end":301},"obj":"PR:000006549"},{"id":"T26348","span":{"begin":329,"end":334},"obj":"PR:000006549"},{"id":"T26349","span":{"begin":335,"end":343},"obj":"GO:0042571"},{"id":"T26350","span":{"begin":378,"end":382},"obj":"NCBITaxon:9925"},{"id":"T26351","span":{"begin":388,"end":394},"obj":"NCBITaxon:9986"},{"id":"T26352","span":{"begin":405,"end":413},"obj":"GO:0042571"},{"id":"T26353","span":{"begin":493,"end":503},"obj":"GO:0042571"},{"id":"T26354","span":{"begin":537,"end":540},"obj":"NCBITaxon:10114"},{"id":"T26355","span":{"begin":546,"end":551},"obj":"PR:000007857"},{"id":"T26356","span":{"begin":616,"end":620},"obj":"NCBITaxon:9925"},{"id":"T26357","span":{"begin":626,"end":631},"obj":"PR:000007859"},{"id":"T26358","span":{"begin":676,"end":679},"obj":"NCBITaxon:10114"},{"id":"T26359","span":{"begin":736,"end":739},"obj":"NCBITaxon:10114"},{"id":"T26360","span":{"begin":793,"end":796},"obj":"NCBITaxon:10114"},{"id":"T26361","span":{"begin":854,"end":860},"obj":"NCBITaxon:9986"},{"id":"T26362","span":{"begin":866,"end":871},"obj":"PR:000013672"},{"id":"T26363","span":{"begin":926,"end":931},"obj":"NCBITaxon:10088"},{"id":"T26364","span":{"begin":937,"end":942},"obj":"PR:000015829"},{"id":"T26365","span":{"begin":943,"end":949},"obj":"PR:000015829"},{"id":"T26366","span":{"begin":998,"end":1004},"obj":"NCBITaxon:9986"},{"id":"T26367","span":{"begin":1010,"end":1017},"obj":"CHEBI:32958"},{"id":"T26368","span":{"begin":1018,"end":1022},"obj":"PR:000008418"},{"id":"T26369","span":{"begin":1084,"end":1089},"obj":"NCBITaxon:10088"},{"id":"T26370","span":{"begin":1095,"end":1102},"obj":"CHEBI:32958"},{"id":"T26371","span":{"begin":1103,"end":1107},"obj":"PR:000008418"},{"id":"T26372","span":{"begin":1134,"end":1139},"obj":"NCBITaxon:10088"},{"id":"T26373","span":{"begin":1145,"end":1150},"obj":"PR:000015865"},{"id":"T26374","span":{"begin":1198,"end":1204},"obj":"NCBITaxon:9986"},{"id":"T26375","span":{"begin":1210,"end":1214},"obj":"PR:000005082"},{"id":"T26376","span":{"begin":1240,"end":1246},"obj":"NCBITaxon:9986"},{"id":"T26377","span":{"begin":1252,"end":1254},"obj":"PR:000027594"},{"id":"T26378","span":{"begin":1252,"end":1260},"obj":"SO:0001728"},{"id":"T26379","span":{"begin":1287,"end":1293},"obj":"NCBITaxon:9986"},{"id":"T26380","span":{"begin":1299,"end":1301},"obj":"PR:000027594"},{"id":"T26381","span":{"begin":1299,"end":1307},"obj":"SO:0001707"},{"id":"T26382","span":{"begin":1334,"end":1340},"obj":"NCBITaxon:9986"},{"id":"T26383","span":{"begin":1403,"end":1408},"obj":"NCBITaxon:10088"},{"id":"T26384","span":{"begin":1414,"end":1418},"obj":"PR:000003675"},{"id":"T26385","span":{"begin":1491,"end":1501},"obj":"GO:0042571"},{"id":"T26391","span":{"begin":1557,"end":1566},"obj":"CHEBI:51248"},{"id":"T26392","span":{"begin":1568,"end":1572},"obj":"NCBITaxon:9925"},{"id":"T26393","span":{"begin":1578,"end":1581},"obj":"NCBITaxon:10114"},{"id":"T26394","span":{"begin":1582,"end":1591},"obj":"CHEBI:51248"},{"id":"T26395","span":{"begin":1597,"end":1601},"obj":"NCBITaxon:9925"},{"id":"T26396","span":{"begin":1607,"end":1612},"obj":"NCBITaxon:10088"},{"id":"T26397","span":{"begin":1613,"end":1622},"obj":"CHEBI:52661"},{"id":"T26398","span":{"begin":1657,"end":1663},"obj":"NCBITaxon:9793"},{"id":"T26399","span":{"begin":1669,"end":1673},"obj":"NCBITaxon:9925"},{"id":"T26400","span":{"begin":1674,"end":1678},"obj":"CHEBI:37926"},{"id":"T26401","span":{"begin":1751,"end":1757},"obj":"NCBITaxon:9793"},{"id":"T26402","span":{"begin":1763,"end":1769},"obj":"NCBITaxon:9986"},{"id":"T26403","span":{"begin":1770,"end":1779},"obj":"CHEBI:51247"}],"text":"Antibodies.\nRabbit polyclonal antibodies to DMRT7 were raised against a purified fusion protein containing glutathione-S-transferase (GST) fused to the C-terminal 279 amino acids of DMRT7. Antibodies to GST were removed by GST-affigel 10 chromatography and the antiserum was then purified by GST-DMRT7-affigel 15 chromatography. DMRT7 antibody was used at 1:200 dilution with a goat anti-rabbit secondary antibody (Molecular Probes, http://www.invitrogen.com) at 1:200 dilution. Other primary antibodies used for immunofluorescence were rat anti-GATA1 (1:200, Santa Cruz Biotechnology, http://www.scbt.com, sc-265), goat anti-GATA4 (1:200, Santa Cruz Biotechnology, sc-1237), rat anti-TRA98 (1:200, gift of H. Tanaka and Y. Nishimune), rat anti-BC7 (1:50, gift of H. Tanaka and Y. Nishimune), rat anti-TRA369 (1:200, gift of H. Tanaka and Y. Nishimune), rabbit anti-RAD51 (1:600 Calbiochem, http://www.calbiochem.com, PC130), mouse anti-GMP-1/SUMO-1 (1:200, Zymed, http://invitrogen.com, 33–2400), rabbit anti-phospho-H2AX (Ser139) (1:200, Upstate, http://www.millipore.com, 01–164), mouse anti-phospho-H2AX (1:200, Upstate, 05–636), mouse anti-SYCP3 (1:200, Abcam, http://www.abcam.com, ab12452), rabbit anti-HP1β (1:100, Abcam, ab10478), rabbit anti-H3-2meK9 (1:100, Upstate, 07–441), rabbit anti-H3-3meK9 (1:200, Upstate, 07–442), rabbit anti-AR (N-20) (1:200, Santa Cruz Biotechnology, sc-816), and mouse anti-αSMA clone 1A4 (1:800, Sigma, http://www.sigmaaldrich.com, A2547). Secondary antibodies used were goat anti-rabbit Alexa 488, goat anti-rabbit Alexa 594, goat anti-rat Alexa 594, and goat anti-mouse Alexa 488 (Molecular Probes) used at 1:250. Donkey anti-goat FITC (Jackson ImmunoResearch Laboratories, http://www.jacksonimmuno.com) and donkey anti-rabbit Texas Red (Jackson) were used at 1:50 according to the manufacturer's instructions."}

    craft-ca-core-ex-dev

    {"project":"craft-ca-core-ex-dev","denotations":[{"id":"T26404","span":{"begin":0,"end":10},"obj":"GO:0042571"},{"id":"T26405","span":{"begin":12,"end":18},"obj":"NCBITaxon:9986"},{"id":"T26406","span":{"begin":30,"end":40},"obj":"GO:0042571"},{"id":"T26407","span":{"begin":44,"end":49},"obj":"PR_EXT:000006549"},{"id":"T26408","span":{"begin":81,"end":87},"obj":"SO_EXT:sequence_fusion_entity_or_process"},{"id":"T26409","span":{"begin":88,"end":95},"obj":"CHEBI_PR_EXT:protein"},{"id":"T26410","span":{"begin":107,"end":118},"obj":"CHEBI:16856"},{"id":"T26411","span":{"begin":107,"end":132},"obj":"GO_PR_EXT:glutathione_S_transferase"},{"id":"T26412","span":{"begin":119,"end":120},"obj":"CHEBI_EXT:sulfur"},{"id":"T26413","span":{"begin":134,"end":137},"obj":"GO_PR_EXT:glutathione_S_transferase"},{"id":"T26414","span":{"begin":139,"end":144},"obj":"SO_EXT:sequence_fusion_process"},{"id":"T26415","span":{"begin":152,"end":162},"obj":"CHEBI_SO_EXT:C_terminus_or_C_terminal_region"},{"id":"T26416","span":{"begin":167,"end":178},"obj":"CHEBI_SO_EXT:amino_acid"},{"id":"T26417","span":{"begin":182,"end":187},"obj":"PR_EXT:000006549"},{"id":"T26418","span":{"begin":189,"end":199},"obj":"GO:0042571"},{"id":"T26419","span":{"begin":203,"end":206},"obj":"GO_PR_EXT:glutathione_S_transferase"},{"id":"T26420","span":{"begin":223,"end":226},"obj":"GO_PR_EXT:glutathione_S_transferase"},{"id":"T26421","span":{"begin":265,"end":270},"obj":"UBERON:0001977"},{"id":"T26422","span":{"begin":292,"end":295},"obj":"GO_PR_EXT:glutathione_S_transferase"},{"id":"T26423","span":{"begin":296,"end":301},"obj":"PR_EXT:000006549"},{"id":"T26424","span":{"begin":329,"end":334},"obj":"PR_EXT:000006549"},{"id":"T26425","span":{"begin":335,"end":343},"obj":"GO:0042571"},{"id":"T26426","span":{"begin":378,"end":382},"obj":"NCBITaxon:9925"},{"id":"T26427","span":{"begin":388,"end":394},"obj":"NCBITaxon:9986"},{"id":"T26428","span":{"begin":405,"end":413},"obj":"GO:0042571"},{"id":"T26429","span":{"begin":415,"end":424},"obj":"CHEBI_EXT:polyatomic_entity_or_group"},{"id":"T26430","span":{"begin":425,"end":431},"obj":"CHEBI_SO_EXT:molecular_probe"},{"id":"T26431","span":{"begin":493,"end":503},"obj":"GO:0042571"},{"id":"T26432","span":{"begin":537,"end":540},"obj":"NCBITaxon:10114"},{"id":"T26433","span":{"begin":546,"end":551},"obj":"PR_EXT:000007857"},{"id":"T26434","span":{"begin":616,"end":620},"obj":"NCBITaxon:9925"},{"id":"T26435","span":{"begin":626,"end":631},"obj":"PR_EXT:000007859"},{"id":"T26436","span":{"begin":676,"end":679},"obj":"NCBITaxon:10114"},{"id":"T26437","span":{"begin":736,"end":739},"obj":"NCBITaxon:10114"},{"id":"T26438","span":{"begin":793,"end":796},"obj":"NCBITaxon:10114"},{"id":"T26439","span":{"begin":854,"end":860},"obj":"NCBITaxon:9986"},{"id":"T26440","span":{"begin":866,"end":871},"obj":"PR_EXT:000013672"},{"id":"T26441","span":{"begin":926,"end":931},"obj":"NCBITaxon:10088"},{"id":"T26442","span":{"begin":937,"end":942},"obj":"PR_EXT:000015829"},{"id":"T26443","span":{"begin":943,"end":949},"obj":"PR_EXT:000015829"},{"id":"T26444","span":{"begin":998,"end":1004},"obj":"NCBITaxon:9986"},{"id":"T26445","span":{"begin":1010,"end":1017},"obj":"CHEBI:32958"},{"id":"T26446","span":{"begin":1018,"end":1022},"obj":"PR_EXT:000008418"},{"id":"T26447","span":{"begin":1084,"end":1089},"obj":"NCBITaxon:10088"},{"id":"T26448","span":{"begin":1095,"end":1102},"obj":"CHEBI:32958"},{"id":"T26449","span":{"begin":1103,"end":1107},"obj":"PR_EXT:000008418"},{"id":"T26450","span":{"begin":1134,"end":1139},"obj":"NCBITaxon:10088"},{"id":"T26451","span":{"begin":1145,"end":1150},"obj":"PR_EXT:000015865"},{"id":"T26452","span":{"begin":1198,"end":1204},"obj":"NCBITaxon:9986"},{"id":"T26453","span":{"begin":1210,"end":1214},"obj":"PR_EXT:000005082"},{"id":"T26454","span":{"begin":1240,"end":1246},"obj":"NCBITaxon:9986"},{"id":"T26455","span":{"begin":1252,"end":1254},"obj":"PR_EXT:000027594"},{"id":"T26456","span":{"begin":1252,"end":1260},"obj":"SO_EXT:0001728"},{"id":"T26457","span":{"begin":1287,"end":1293},"obj":"NCBITaxon:9986"},{"id":"T26458","span":{"begin":1299,"end":1301},"obj":"PR_EXT:000027594"},{"id":"T26459","span":{"begin":1299,"end":1307},"obj":"SO_EXT:0001707"},{"id":"T26460","span":{"begin":1334,"end":1340},"obj":"NCBITaxon:9986"},{"id":"T26461","span":{"begin":1346,"end":1348},"obj":"GO_PR_EXT:androgen_receptor"},{"id":"T26462","span":{"begin":1403,"end":1408},"obj":"NCBITaxon:10088"},{"id":"T26463","span":{"begin":1414,"end":1418},"obj":"PR_EXT:000003675"},{"id":"T26464","span":{"begin":1419,"end":1424},"obj":"SO_EXT:sequence_cloned_entity"},{"id":"T26465","span":{"begin":1491,"end":1501},"obj":"GO:0042571"},{"id":"T26466","span":{"begin":1512,"end":1516},"obj":"NCBITaxon:9925"},{"id":"T26467","span":{"begin":1522,"end":1528},"obj":"NCBITaxon:9986"},{"id":"T26468","span":{"begin":1529,"end":1538},"obj":"CHEBI:52661"},{"id":"T26469","span":{"begin":1540,"end":1544},"obj":"NCBITaxon:9925"},{"id":"T26470","span":{"begin":1550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polyclonal antibodies to DMRT7 were raised against a purified fusion protein containing glutathione-S-transferase (GST) fused to the C-terminal 279 amino acids of DMRT7. Antibodies to GST were removed by GST-affigel 10 chromatography and the antiserum was then purified by GST-DMRT7-affigel 15 chromatography. DMRT7 antibody was used at 1:200 dilution with a goat anti-rabbit secondary antibody (Molecular Probes, http://www.invitrogen.com) at 1:200 dilution. Other primary antibodies used for immunofluorescence were rat anti-GATA1 (1:200, Santa Cruz Biotechnology, http://www.scbt.com, sc-265), goat anti-GATA4 (1:200, Santa Cruz Biotechnology, sc-1237), rat anti-TRA98 (1:200, gift of H. Tanaka and Y. Nishimune), rat anti-BC7 (1:50, gift of H. Tanaka and Y. Nishimune), rat anti-TRA369 (1:200, gift of H. Tanaka and Y. Nishimune), rabbit anti-RAD51 (1:600 Calbiochem, http://www.calbiochem.com, PC130), mouse anti-GMP-1/SUMO-1 (1:200, Zymed, http://invitrogen.com, 33–2400), rabbit anti-phospho-H2AX (Ser139) (1:200, Upstate, http://www.millipore.com, 01–164), mouse anti-phospho-H2AX (1:200, Upstate, 05–636), mouse anti-SYCP3 (1:200, Abcam, http://www.abcam.com, ab12452), rabbit anti-HP1β (1:100, Abcam, ab10478), rabbit anti-H3-2meK9 (1:100, Upstate, 07–441), rabbit anti-H3-3meK9 (1:200, Upstate, 07–442), rabbit anti-AR (N-20) (1:200, Santa Cruz Biotechnology, sc-816), and mouse anti-αSMA clone 1A4 (1:800, Sigma, http://www.sigmaaldrich.com, A2547). Secondary antibodies used were goat anti-rabbit Alexa 488, goat anti-rabbit Alexa 594, goat anti-rat Alexa 594, and goat anti-mouse Alexa 488 (Molecular Probes) used at 1:250. Donkey anti-goat FITC (Jackson ImmunoResearch Laboratories, http://www.jacksonimmuno.com) and donkey anti-rabbit Texas Red (Jackson) were used at 1:50 according to the manufacturer's instructions."}