PMC:1853120 / 40099-41001
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2_test
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craft-ca-core-dev
{"project":"craft-ca-core-dev","denotations":[{"id":"T21002","span":{"begin":71,"end":78},"obj":"GO:0001741"},{"id":"T21003","span":{"begin":90,"end":97},"obj":"PR:000043452"},{"id":"T21004","span":{"begin":90,"end":97},"obj":"CHEBI:15358"},{"id":"T21005","span":{"begin":120,"end":128},"obj":"PR:000043452"},{"id":"T21006","span":{"begin":120,"end":128},"obj":"CHEBI:15358"},{"id":"T21007","span":{"begin":132,"end":138},"obj":"UBERON:0000473"},{"id":"T21008","span":{"begin":148,"end":155},"obj":"PR:000043452"},{"id":"T21009","span":{"begin":148,"end":155},"obj":"CHEBI:15358"},{"id":"T21010","span":{"begin":156,"end":162},"obj":"CHEBI:32875"},{"id":"T21011","span":{"begin":199,"end":205},"obj":"SO:0000910"},{"id":"T21012","span":{"begin":215,"end":224},"obj":"CL:0000586"},{"id":"T21013","span":{"begin":215,"end":239},"obj":"PR:000011413"},{"id":"T21014","span":{"begin":225,"end":232},"obj":"GO:0005634"},{"id":"T21015","span":{"begin":337,"end":352},"obj":"GO:0000792"},{"id":"T21016","span":{"begin":388,"end":393},"obj":"PR:000006549"},{"id":"T21017","span":{"begin":411,"end":418},"obj":"GO:0001741"},{"id":"T21018","span":{"begin":531,"end":536},"obj":"PR:000006549"},{"id":"T21019","span":{"begin":608,"end":617},"obj":"GO:0000785"},{"id":"T21020","span":{"begin":636,"end":643},"obj":"GO:0001741"},{"id":"T21021","span":{"begin":679,"end":688},"obj":"GO:0000785"},{"id":"T21022","span":{"begin":689,"end":699},"obj":"GO:0065007"},{"id":"T21023","span":{"begin":733,"end":739},"obj":"SO:0000417"},{"id":"T21024","span":{"begin":775,"end":781},"obj":"SO:0000417"},{"id":"T21025","span":{"begin":806,"end":815},"obj":"GO:0000785"},{"id":"T21026","span":{"begin":806,"end":825},"obj":"GO:0016568"},{"id":"T21027","span":{"begin":826,"end":835},"obj":"GO:0032991"}],"text":"A number of other proteins have been identified that interact with the XY body, including histone variants and modified histones, a testis-specific histone methyl transferase, chromobox proteins, an orphan receptor germ-cell nuclear factor, and recombination-related proteins [60]. A common feature of these proteins is involvement with heterochromatin and/or transcriptional repression. DMRT7 is unusual among XY body proteins in being related to highly site-specific transcriptional regulators. An attractive speculation is that DMRT7 may provide sequence specificity in recruiting other proteins, such as chromatin modifiers, to the XY body as part of the transition to PMSC. Chromatin regulation may be a common mechanism for DM domain proteins, as we find that other DM domain proteins associate with chromatin modifying complexes (M. W. Murphy, D. Zarkower, and V. J. Bardwell, unpublished data)."}
craft-ca-core-ex-dev
{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T21297","span":{"begin":18,"end":26},"obj":"CHEBI_PR_EXT:protein"},{"id":"T21298","span":{"begin":71,"end":78},"obj":"GO:0001741"},{"id":"T21299","span":{"begin":90,"end":97},"obj":"PR_EXT:000043452"},{"id":"T21300","span":{"begin":90,"end":97},"obj":"CHEBI:15358"},{"id":"T21301","span":{"begin":98,"end":106},"obj":"SO_EXT:sequence_variant_entity"},{"id":"T21302","span":{"begin":111,"end":119},"obj":"SO_EXT:sequence_alteration_process"},{"id":"T21303","span":{"begin":120,"end":128},"obj":"PR_EXT:000043452"},{"id":"T21304","span":{"begin":120,"end":128},"obj":"CHEBI:15358"},{"id":"T21305","span":{"begin":132,"end":138},"obj":"UBERON:0000473"},{"id":"T21306","span":{"begin":148,"end":155},"obj":"PR_EXT:000043452"},{"id":"T21307","span":{"begin":148,"end":155},"obj":"CHEBI:15358"},{"id":"T21308","span":{"begin":148,"end":174},"obj":"GO_EXT:0042054"},{"id":"T21309","span":{"begin":156,"end":162},"obj":"CHEBI:32875"},{"id":"T21310","span":{"begin":186,"end":194},"obj":"CHEBI_PR_EXT:protein"},{"id":"T21311","span":{"begin":199,"end":205},"obj":"SO:0000910"},{"id":"T21312","span":{"begin":206,"end":214},"obj":"GO_EXT:0004872"},{"id":"T21313","span":{"begin":215,"end":224},"obj":"CL:0000586"},{"id":"T21314","span":{"begin":215,"end":239},"obj":"PR_EXT:000011413"},{"id":"T21315","span":{"begin":220,"end":224},"obj":"CL_GO_EXT:cell"},{"id":"T21316","span":{"begin":225,"end":232},"obj":"GO:0005634"},{"id":"T21317","span":{"begin":245,"end":258},"obj":"GO_SO_EXT:sequence_rearrangement_process"},{"id":"T21318","span":{"begin":267,"end":275},"obj":"CHEBI_PR_EXT:protein"},{"id":"T21319","span":{"begin":308,"end":316},"obj":"CHEBI_PR_EXT:protein"},{"id":"T21320","span":{"begin":337,"end":352},"obj":"GO:0000792"},{"id":"T21321","span":{"begin":360,"end":375},"obj":"GO_EXT:transcription"},{"id":"T21322","span":{"begin":388,"end":393},"obj":"PR_EXT:000006549"},{"id":"T21323","span":{"begin":411,"end":418},"obj":"GO:0001741"},{"id":"T21324","span":{"begin":419,"end":427},"obj":"CHEBI_PR_EXT:protein"},{"id":"T21325","span":{"begin":469,"end":484},"obj":"GO_EXT:transcription"},{"id":"T21326","span":{"begin":485,"end":495},"obj":"GO_EXT:regulator"},{"id":"T21327","span":{"begin":531,"end":536},"obj":"PR_EXT:000006549"},{"id":"T21328","span":{"begin":549,"end":557},"obj":"SO_EXT:biological_sequence"},{"id":"T21329","span":{"begin":573,"end":583},"obj":"GO_EXT:biological_recruitment"},{"id":"T21330","span":{"begin":590,"end":598},"obj":"CHEBI_PR_EXT:protein"},{"id":"T21331","span":{"begin":608,"end":617},"obj":"GO:0000785"},{"id":"T21332","span":{"begin":636,"end":643},"obj":"GO:0001741"},{"id":"T21333","span":{"begin":679,"end":688},"obj":"GO:0000785"},{"id":"T21334","span":{"begin":689,"end":699},"obj":"GO:0065007"},{"id":"T21335","span":{"begin":733,"end":739},"obj":"SO_EXT:0000417"},{"id":"T21336","span":{"begin":740,"end":748},"obj":"CHEBI_PR_EXT:protein"},{"id":"T21337","span":{"begin":775,"end":781},"obj":"SO_EXT:0000417"},{"id":"T21338","span":{"begin":782,"end":790},"obj":"CHEBI_PR_EXT:protein"},{"id":"T21339","span":{"begin":806,"end":815},"obj":"GO:0000785"},{"id":"T21340","span":{"begin":806,"end":825},"obj":"GO:0016568"},{"id":"T21341","span":{"begin":816,"end":825},"obj":"SO_EXT:sequence_alteration_process"},{"id":"T21342","span":{"begin":826,"end":835},"obj":"GO:0032991"}],"text":"A number of other proteins have been identified that interact with the XY body, including histone variants and modified histones, a testis-specific histone methyl transferase, chromobox proteins, an orphan receptor germ-cell nuclear factor, and recombination-related proteins [60]. A common feature of these proteins is involvement with heterochromatin and/or transcriptional repression. DMRT7 is unusual among XY body proteins in being related to highly site-specific transcriptional regulators. An attractive speculation is that DMRT7 may provide sequence specificity in recruiting other proteins, such as chromatin modifiers, to the XY body as part of the transition to PMSC. Chromatin regulation may be a common mechanism for DM domain proteins, as we find that other DM domain proteins associate with chromatin modifying complexes (M. W. Murphy, D. Zarkower, and V. J. Bardwell, unpublished data)."}