PMC:1635039 / 520-800
Annnotations
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T591 | 73-83 | VBN | denotes | understood |
| T597 | 2-4 | , | denotes | , |
| T598 | 4-7 | DT | denotes | the |
| T599 | 37-47 | NNS | denotes | mechanisms |
| T600 | 8-16 | JJ | denotes | detailed |
| T601 | 17-26 | JJ | denotes | molecular |
| T602 | 27-36 | NN | denotes | signaling |
| T603 | 48-50 | FW | denotes | in |
| T604 | 51-55 | FW | denotes | vivo |
| T605 | 56-59 | VBP | denotes | are |
| T606 | 60-65 | RB | denotes | still |
| T607 | 66-72 | RB | denotes | poorly |
| T608 | 83-84 | . | denotes | . |
| T609 | 84-93 | sentence | denotes | Results |
| T610 | 86-93 | NNS | denotes | Results |
| T611 | 93-188 | sentence | denotes | We deleted the TGF-β type I receptor Alk5 specifically in the mouse neural crest cell lineage. |
| T612 | 94-96 | PRP | denotes | We |
| T613 | 97-104 | VBD | denotes | deleted |
| T614 | 105-108 | DT | denotes | the |
| T615 | 131-135 | NN | denotes | Alk5 |
| T616 | 109-112 | NN | denotes | TGF |
| T617 | 113-114 | NN | denotes | β |
| T618 | 112-113 | HYPH | denotes | - |
| T619 | 115-119 | NN | denotes | type |
| T620 | 120-121 | CD | denotes | I |
| T621 | 122-130 | NN | denotes | receptor |
| T622 | 136-148 | RB | denotes | specifically |
| T623 | 149-151 | IN | denotes | in |
| T624 | 152-155 | DT | denotes | the |
| T625 | 180-187 | NN | denotes | lineage |
| T626 | 156-161 | NN | denotes | mouse |
| T627 | 162-168 | JJ | denotes | neural |
| T628 | 175-179 | NN | denotes | cell |
| T629 | 169-174 | NN | denotes | crest |
| T630 | 187-188 | . | denotes | . |
| T632 | 189-196 | NN | denotes | Failure |
| T633 | 219-224 | VBZ | denotes | leads |
| T634 | 197-199 | IN | denotes | in |
| T635 | 200-209 | NN | denotes | signaling |
| T636 | 210-213 | IN | denotes | via |
| T637 | 214-218 | NN | denotes | ALK5 |
| T638 | 225-227 | IN | denotes | to |
| T639 | 228-234 | JJ | denotes | severe |
| T640 | 265-272 | NNS | denotes | defects |
| T641 | 235-249 | JJ | denotes | cardiovascular |
| T642 | 250-253 | CC | denotes | and |
| T643 | 254-264 | JJ | denotes | pharyngeal |
| T644 | 272-274 | , | denotes | , |
| R88 | T597 | T591 | punct | ", ",understood |
| R89 | T598 | T599 | det | the,mechanisms |
| R90 | T599 | T591 | nsubjpass | mechanisms,understood |
| R91 | T600 | T599 | amod | detailed,mechanisms |
| R92 | T601 | T599 | amod | molecular,mechanisms |
| R93 | T602 | T599 | compound | signaling,mechanisms |
| R94 | T603 | T604 | advmod | in,vivo |
| R95 | T604 | T599 | advmod | vivo,mechanisms |
| R96 | T605 | T591 | auxpass | are,understood |
| R97 | T606 | T591 | advmod | still,understood |
| R98 | T607 | T591 | advmod | poorly,understood |
| R99 | T608 | T591 | punct | .,understood |
| R100 | T612 | T613 | nsubj | We,deleted |
| R101 | T614 | T615 | det | the,Alk5 |
| R102 | T615 | T613 | dobj | Alk5,deleted |
| R103 | T616 | T617 | nmod | TGF,β |
| R104 | T617 | T615 | nmod | β,Alk5 |
| R105 | T618 | T617 | punct | -,β |
| R106 | T619 | T615 | nmod | type,Alk5 |
| R107 | T620 | T619 | nummod | I,type |
| R108 | T621 | T615 | compound | receptor,Alk5 |
| R109 | T622 | T613 | advmod | specifically,deleted |
| R110 | T623 | T613 | prep | in,deleted |
| R111 | T624 | T625 | det | the,lineage |
| R112 | T625 | T623 | pobj | lineage,in |
| R113 | T626 | T625 | nmod | mouse,lineage |
| R114 | T627 | T628 | amod | neural,cell |
| R115 | T628 | T625 | compound | cell,lineage |
| R116 | T629 | T628 | compound | crest,cell |
| R117 | T630 | T613 | punct | .,deleted |
| R118 | T632 | T633 | nsubj | Failure,leads |
| R119 | T634 | T632 | prep | in,Failure |
| R120 | T635 | T634 | pobj | signaling,in |
| R121 | T636 | T632 | prep | via,Failure |
| R122 | T637 | T636 | pobj | ALK5,via |
| R123 | T638 | T633 | prep | to,leads |
| R124 | T639 | T640 | amod | severe,defects |
| R125 | T640 | T638 | pobj | defects,to |
| R126 | T641 | T640 | amod | cardiovascular,defects |
| R127 | T642 | T641 | cc | and,cardiovascular |
| R128 | T643 | T641 | conj | pharyngeal,cardiovascular |
| R129 | T644 | T640 | punct | ", ",defects |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the bag model. You can change it to the chain model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T475 | 17-26 | CHEBI_EXT:polyatomic_entity_or_group | denotes | molecular |
| T476 | 27-36 | GO_EXT:cell_communication_or_signaling_or_signal_transduction | denotes | signaling |
| T477 | 97-104 | SO_EXT:sequence_deletion_process | denotes | deleted |
| T478 | 109-130 | GO_PR_EXT:transforming_growth_factor_beta_receptor_type_I | denotes | TGF-β type I receptor |
| T479 | 131-135 | PR_EXT:000000047 | denotes | Alk5 |
| T480 | 156-161 | NCBITaxon:10088 | denotes | mouse |
| T481 | 162-174 | UBERON:0002342 | denotes | neural crest |
| T482 | 162-179 | CL_EXT:neural_crest_cell | denotes | neural crest cell |
| T483 | 175-179 | CL_GO_EXT:cell | denotes | cell |
| T484 | 200-209 | GO_EXT:cell_communication_or_signaling_or_signal_transduction | denotes | signaling |
| T485 | 214-218 | PR_EXT:000000047 | denotes | ALK5 |
| T486 | 235-249 | UBERON:0004535 | denotes | cardiovascular |
| T487 | 254-264 | UBERON:0006562 | denotes | pharyngeal |
craft-ca-core-dev
Below, discontinuous spans are shown in the bag model. You can change it to the chain model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T423 | 109-114 | PR:000000046 | denotes | TGF-β |
| T424 | 131-135 | PR:000000047 | denotes | Alk5 |
| T425 | 156-161 | NCBITaxon:10088 | denotes | mouse |
| T426 | 162-174 | UBERON:0002342 | denotes | neural crest |
| T427 | 214-218 | PR:000000047 | denotes | ALK5 |
| T428 | 235-249 | UBERON:0004535 | denotes | cardiovascular |
| T429 | 254-264 | UBERON:0006562 | denotes | pharyngeal |