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PMC:1635039 / 30588-31168 JSONTXT

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Id Subject Object Predicate Lexical cue
T15914 0-4 NN denotes Alk5
T15915 5-12 NN denotes Wnt1Cre
T15916 4-5 HYPH denotes /
T15917 13-17 NNS denotes mice
T15918 17-212 sentence denotes Alk5 (and Alk2) mutant and control embryos were generated by mating Alk5ko/+(Alk2ko/+)/Wnt1-Cre male mice with females homozygous for the Alk5flox (Alk2flox) allele and the R26R reporter[12,19].
T15919 18-22 NN denotes Alk5
T15920 34-40 NN denotes mutant
T15921 23-24 -LRB- denotes (
T15922 24-27 CC denotes and
T15923 28-32 NN denotes Alk2
T15924 32-33 -RRB- denotes )
T15925 53-60 NNS denotes embryos
T15926 41-44 CC denotes and
T15927 45-52 NN denotes control
T15928 66-75 VBN denotes generated
T15929 61-65 VBD denotes were
T15930 76-78 IN denotes by
T15931 79-85 VBG denotes mating
T15932 86-92 NN denotes Alk5ko
T15933 119-123 NNS denotes mice
T15934 92-93 HYPH denotes /
T15935 93-94 SYM denotes +
T15936 94-95 -LRB- denotes (
T15937 95-101 NN denotes Alk2ko
T15938 101-102 HYPH denotes /
T15939 102-103 SYM denotes +
T15940 103-104 -RRB- denotes )
T15941 104-105 HYPH denotes /
T15942 105-109 NN denotes Wnt1
T15943 110-113 NN denotes Cre
T15944 109-110 HYPH denotes -
T15945 114-118 JJ denotes male
T15946 124-128 IN denotes with
T15947 129-136 NNS denotes females
T15948 137-147 JJ denotes homozygous
T15949 148-151 IN denotes for
T15950 152-155 DT denotes the
T15951 176-182 NN denotes allele
T15952 156-164 NN denotes Alk5flox
T15953 165-166 -LRB- denotes (
T15954 166-174 NN denotes Alk2flox
T15955 174-175 -RRB- denotes )
T15956 183-186 CC denotes and
T15957 187-190 DT denotes the
T15958 196-204 NN denotes reporter
T15959 191-195 NN denotes R26R
T15960 204-205 -LRB- denotes [
T15961 208-210 CD denotes 19
T15962 205-207 CD denotes 12
T15963 207-208 , denotes ,
T15964 210-211 -RRB- denotes ]
T15965 211-212 . denotes .
T15966 212-274 sentence denotes Genotyping was performed by PCR as described earlier [21,42].
T15967 213-223 NN denotes Genotyping
T15968 228-237 VBN denotes performed
T15969 224-227 VBD denotes was
T15970 238-240 IN denotes by
T15971 241-244 NN denotes PCR
T15972 245-247 IN denotes as
T15973 248-257 VBN denotes described
T15974 258-265 RBR denotes earlier
T15975 266-267 -LRB- denotes [
T15976 270-272 CD denotes 42
T15977 267-269 CD denotes 21
T15978 269-270 , denotes ,
T15979 272-273 -RRB- denotes ]
T15980 273-274 . denotes .
T15981 274-412 sentence denotes Wnt1-Cre mice were kindly provided by A. McMahon (Harvard University) and R26R reporter mice were obtained from the Jackson laboratories.
T15982 275-279 NN denotes Wnt1
T15983 280-283 NN denotes Cre
T15984 279-280 HYPH denotes -
T15985 284-288 NNS denotes mice
T15986 301-309 VBN denotes provided
T15987 289-293 VBD denotes were
T15988 294-300 RB denotes kindly
T15989 310-312 IN denotes by
T15990 313-315 NNP denotes A.
T15991 316-323 NNP denotes McMahon
T15992 324-325 -LRB- denotes (
T15993 333-343 NNP denotes University
T15994 325-332 NNP denotes Harvard
T15995 343-344 -RRB- denotes )
T15996 345-348 CC denotes and
T15997 349-353 NN denotes R26R
T15998 354-362 NN denotes reporter
T15999 363-367 NNS denotes mice
T16000 373-381 VBN denotes obtained
T16001 368-372 VBD denotes were
T16002 382-386 IN denotes from
T16003 387-390 DT denotes the
T16004 399-411 NNS denotes laboratories
T16005 391-398 NNP denotes Jackson
T16006 411-412 . denotes .
T16007 412-580 sentence denotes All studies were carried out at the Animal Care Facility of the Saban Research Institute of Childrens Hospital Los Angeles in accordance with institutional guidelines.
T16008 413-416 DT denotes All
T16009 417-424 NNS denotes studies
T16010 430-437 VBN denotes carried
T16011 425-429 VBD denotes were
T16012 438-441 RP denotes out
T16013 442-444 IN denotes at
T16014 445-448 DT denotes the
T16015 461-469 NN denotes Facility
T16016 449-455 NN denotes Animal
T16017 456-460 NN denotes Care
T16018 470-472 IN denotes of
T16019 473-476 DT denotes the
T16020 492-501 NNP denotes Institute
T16021 477-482 NNP denotes Saban
T16022 483-491 NNP denotes Research
T16023 502-504 IN denotes of
T16024 505-514 NNP denotes Childrens
T16025 515-523 NNP denotes Hospital
T16026 524-527 NNP denotes Los
T16027 528-535 NNP denotes Angeles
T16028 536-538 IN denotes in
T16029 539-549 NN denotes accordance
T16030 550-554 IN denotes with
T16031 555-568 JJ denotes institutional
T16032 569-579 NNS denotes guidelines
T16033 579-580 . denotes .
R4830 T15914 T15915 compound Alk5,Wnt1Cre
R4831 T15915 T15917 compound Wnt1Cre,mice
R4832 T15916 T15915 punct /,Wnt1Cre
R4833 T15919 T15920 nmod Alk5,mutant
R4834 T15920 T15925 nmod mutant,embryos
R4835 T15921 T15919 punct (,Alk5
R4836 T15922 T15919 cc and,Alk5
R4837 T15923 T15919 conj Alk2,Alk5
R4838 T15924 T15920 punct ),mutant
R4839 T15925 T15928 nsubjpass embryos,generated
R4840 T15926 T15920 cc and,mutant
R4841 T15927 T15920 conj control,mutant
R4842 T15929 T15928 auxpass were,generated
R4843 T15930 T15928 agent by,generated
R4844 T15931 T15930 pcomp mating,by
R4845 T15932 T15933 nmod Alk5ko,mice
R4846 T15933 T15931 dobj mice,mating
R4847 T15934 T15932 punct /,Alk5ko
R4848 T15935 T15932 punct +,Alk5ko
R4849 T15936 T15937 punct (,Alk2ko
R4850 T15937 T15932 parataxis Alk2ko,Alk5ko
R4851 T15938 T15937 punct /,Alk2ko
R4852 T15939 T15937 punct +,Alk2ko
R4853 T15940 T15937 punct ),Alk2ko
R4854 T15941 T15932 punct /,Alk5ko
R4855 T15942 T15943 compound Wnt1,Cre
R4856 T15943 T15932 appos Cre,Alk5ko
R4857 T15944 T15943 punct -,Cre
R4858 T15945 T15933 amod male,mice
R4859 T15946 T15931 prep with,mating
R4860 T15947 T15946 pobj females,with
R4861 T15948 T15947 amod homozygous,females
R4862 T15949 T15948 prep for,homozygous
R4863 T15950 T15951 det the,allele
R4864 T15951 T15949 pobj allele,for
R4865 T15952 T15951 nmod Alk5flox,allele
R4866 T15953 T15954 punct (,Alk2flox
R4867 T15954 T15952 parataxis Alk2flox,Alk5flox
R4868 T15955 T15954 punct ),Alk2flox
R4869 T15956 T15951 cc and,allele
R4870 T15957 T15958 det the,reporter
R4871 T15958 T15951 conj reporter,allele
R4872 T15959 T15958 compound R26R,reporter
R4873 T15960 T15961 punct [,19
R4874 T15961 T15931 parataxis 19,mating
R4875 T15962 T15961 nummod 12,19
R4876 T15963 T15961 punct ",",19
R4877 T15964 T15961 punct ],19
R4878 T15965 T15928 punct .,generated
R4879 T15967 T15968 nsubjpass Genotyping,performed
R4880 T15969 T15968 auxpass was,performed
R4881 T15970 T15968 prep by,performed
R4882 T15971 T15970 pobj PCR,by
R4883 T15972 T15973 mark as,described
R4884 T15973 T15968 advcl described,performed
R4885 T15974 T15973 advmod earlier,described
R4886 T15975 T15976 punct [,42
R4887 T15976 T15973 parataxis 42,described
R4888 T15977 T15976 nummod 21,42
R4889 T15978 T15976 punct ",",42
R4890 T15979 T15976 punct ],42
R4891 T15980 T15968 punct .,performed
R4892 T15982 T15983 compound Wnt1,Cre
R4893 T15983 T15985 compound Cre,mice
R4894 T15984 T15983 punct -,Cre
R4895 T15985 T15986 nsubjpass mice,provided
R4896 T15987 T15986 auxpass were,provided
R4897 T15988 T15986 advmod kindly,provided
R4898 T15989 T15986 agent by,provided
R4899 T15990 T15991 compound A.,McMahon
R4900 T15991 T15989 pobj McMahon,by
R4901 T15992 T15993 punct (,University
R4902 T15993 T15986 parataxis University,provided
R4903 T15994 T15993 compound Harvard,University
R4904 T15995 T15993 punct ),University
R4905 T15996 T15986 cc and,provided
R4906 T15997 T15998 compound R26R,reporter
R4907 T15998 T15999 compound reporter,mice
R4908 T15999 T16000 nsubjpass mice,obtained
R4909 T16000 T15986 conj obtained,provided
R4910 T16001 T16000 auxpass were,obtained
R4911 T16002 T16000 prep from,obtained
R4912 T16003 T16004 det the,laboratories
R4913 T16004 T16002 pobj laboratories,from
R4914 T16005 T16004 compound Jackson,laboratories
R4915 T16006 T16000 punct .,obtained
R4916 T16008 T16009 det All,studies
R4917 T16009 T16010 nsubjpass studies,carried
R4918 T16011 T16010 auxpass were,carried
R4919 T16012 T16010 prt out,carried
R4920 T16013 T16010 prep at,carried
R4921 T16014 T16015 det the,Facility
R4922 T16015 T16013 pobj Facility,at
R4923 T16016 T16017 compound Animal,Care
R4924 T16017 T16015 compound Care,Facility
R4925 T16018 T16015 prep of,Facility
R4926 T16019 T16020 det the,Institute
R4927 T16020 T16018 pobj Institute,of
R4928 T16021 T16020 compound Saban,Institute
R4929 T16022 T16020 compound Research,Institute
R4930 T16023 T16020 prep of,Institute
R4931 T16024 T16025 compound Childrens,Hospital
R4932 T16025 T16023 pobj Hospital,of
R4933 T16026 T16027 compound Los,Angeles
R4934 T16027 T16025 npadvmod Angeles,Hospital
R4935 T16028 T16010 prep in,carried
R4936 T16029 T16028 pobj accordance,in
R4937 T16030 T16029 prep with,accordance
R4938 T16031 T16032 amod institutional,guidelines
R4939 T16032 T16030 pobj guidelines,with
R4940 T16033 T16010 punct .,carried

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T15889 0-4 PR_EXT:000000047 denotes Alk5
T15890 13-17 NCBITaxon:10088 denotes mice
T15891 18-22 PR_EXT:000000047 denotes Alk5
T15892 28-32 PR_EXT:000000067 denotes Alk2
T15893 34-40 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T15894 53-60 UBERON:0000922 denotes embryos
T15895 79-85 GO:0007618 denotes mating
T15896 86-90 PR_EXT:000000047 denotes Alk5
T15897 93-94 SO_EXT:normal_or_wild_type_or_present denotes +
T15898 95-99 PR_EXT:000000067 denotes Alk2
T15899 102-103 SO_EXT:normal_or_wild_type_or_present denotes +
T15900 105-109 PR_EXT:000017435 denotes Wnt1
T15901 114-118 PATO_UBERON_EXT:male_or_bearer_of_maleness denotes male
T15902 119-123 NCBITaxon:10088 denotes mice
T15903 129-136 PATO_UBERON_EXT:female_or_bearer_of_femaleness denotes females
T15904 156-160 PR_EXT:000000047 denotes Alk5
T15905 160-164 SO:0000359 denotes flox
T15906 166-170 PR_EXT:000000067 denotes Alk2
T15907 170-174 SO:0000359 denotes flox
T15908 176-182 SO_EXT:0001023 denotes allele
T15909 275-279 PR_EXT:000017435 denotes Wnt1
T15910 284-288 NCBITaxon:10088 denotes mice
T15911 363-367 NCBITaxon:10088 denotes mice
T15912 449-455 NCBITaxon:33208 denotes Animal
T15913 505-514 NCBITaxon_UBERON_EXT:child denotes Childrens

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T15870 0-4 PR:000000047 denotes Alk5
T15871 13-17 NCBITaxon:10088 denotes mice
T15872 18-22 PR:000000047 denotes Alk5
T15873 28-32 PR:000000067 denotes Alk2
T15874 53-60 UBERON:0000922 denotes embryos
T15875 79-85 GO:0007618 denotes mating
T15876 86-90 PR:000000047 denotes Alk5
T15877 95-99 PR:000000067 denotes Alk2
T15878 105-109 PR:000017435 denotes Wnt1
T15879 119-123 NCBITaxon:10088 denotes mice
T15880 156-160 PR:000000047 denotes Alk5
T15881 160-164 SO:0000359 denotes flox
T15882 166-170 PR:000000067 denotes Alk2
T15883 170-174 SO:0000359 denotes flox
T15884 176-182 SO:0001023 denotes allele
T15885 275-279 PR:000017435 denotes Wnt1
T15886 284-288 NCBITaxon:10088 denotes mice
T15887 363-367 NCBITaxon:10088 denotes mice
T15888 449-455 NCBITaxon:33208 denotes Animal