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PMC:1635039 / 23292-24927 JSONTXT

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Id Subject Object Predicate Lexical cue
T13939 0-6 IN denotes During
T13940 66-72 VBN denotes proven
T13941 7-10 DT denotes the
T13942 20-25 NNS denotes years
T13943 11-15 JJ denotes last
T13944 16-19 JJ denotes few
T13945 26-29 DT denotes the
T13946 57-61 NN denotes line
T13947 30-34 NN denotes Wnt1
T13948 35-38 NN denotes Cre
T13949 34-35 HYPH denotes -
T13950 39-49 JJ denotes transgenic
T13951 50-56 NN denotes driver
T13952 62-65 VBZ denotes has
T13953 73-75 TO denotes to
T13954 76-78 VB denotes be
T13955 79-80 DT denotes a
T13956 90-94 NN denotes tool
T13957 81-89 JJ denotes powerful
T13958 95-98 IN denotes for
T13959 99-105 NN denotes tissue
T13960 106-114 JJ denotes specific
T13961 105-106 HYPH denotes -
T13962 120-128 NN denotes deletion
T13963 115-119 NN denotes gene
T13964 129-131 IN denotes in
T13965 132-136 NNS denotes NCCs
T13966 137-138 -LRB- denotes [
T13967 147-149 CD denotes 28
T13968 138-140 CD denotes 12
T13969 140-141 , denotes ,
T13970 141-143 CD denotes 13
T13971 143-144 , denotes ,
T13972 144-146 CD denotes 27
T13973 146-147 , denotes ,
T13974 149-150 -RRB- denotes ]
T13975 150-151 . denotes .
T13976 151-340 sentence denotes Using this approach, several studies have independently shown that the NC-specific deletion of the Tgfbr2 gene leads to a distinct set of calvarial, facial and cardiac defects [8,9,20,29].
T13977 152-157 VBG denotes Using
T13978 208-213 VBN denotes shown
T13979 158-162 DT denotes this
T13980 163-171 NN denotes approach
T13981 171-173 , denotes ,
T13982 173-180 JJ denotes several
T13983 181-188 NNS denotes studies
T13984 189-193 VBP denotes have
T13985 194-207 RB denotes independently
T13986 214-218 IN denotes that
T13987 263-268 VBZ denotes leads
T13988 219-222 DT denotes the
T13989 235-243 NN denotes deletion
T13990 223-225 NN denotes NC
T13991 226-234 JJ denotes specific
T13992 225-226 HYPH denotes -
T13993 244-246 IN denotes of
T13994 247-250 DT denotes the
T13995 258-262 NN denotes gene
T13996 251-257 NN denotes Tgfbr2
T13997 269-271 IN denotes to
T13998 272-273 DT denotes a
T13999 283-286 NN denotes set
T14000 274-282 JJ denotes distinct
T14001 287-289 IN denotes of
T14002 290-299 JJ denotes calvarial
T14003 320-327 NNS denotes defects
T14004 299-301 , denotes ,
T14005 301-307 JJ denotes facial
T14006 308-311 CC denotes and
T14007 312-319 JJ denotes cardiac
T14008 328-329 -LRB- denotes [
T14009 336-338 CD denotes 29
T14010 329-330 CD denotes 8
T14011 330-331 , denotes ,
T14012 331-332 CD denotes 9
T14013 332-333 , denotes ,
T14014 333-335 CD denotes 20
T14015 335-336 , denotes ,
T14016 338-339 -RRB- denotes ]
T14017 339-340 . denotes .
T14018 340-627 sentence denotes Interestingly, these defects appear quite different both in the craniofacial and pharyngeal regions, including the heart, when compared to the corresponding mutants of Alk5, which encodes the TGF-β type I receptor, a prototypical binding partner of TGF-βRII [19] and the present study).
T14019 341-354 RB denotes Interestingly
T14020 370-376 VBP denotes appear
T14021 354-356 , denotes ,
T14022 356-361 DT denotes these
T14023 362-369 NNS denotes defects
T14024 377-382 RB denotes quite
T14025 383-392 JJ denotes different
T14026 393-397 CC denotes both
T14027 398-400 IN denotes in
T14028 401-404 DT denotes the
T14029 433-440 NNS denotes regions
T14030 405-417 JJ denotes craniofacial
T14031 418-421 CC denotes and
T14032 422-432 JJ denotes pharyngeal
T14033 440-442 , denotes ,
T14034 442-451 VBG denotes including
T14035 452-455 DT denotes the
T14036 456-461 NN denotes heart
T14037 461-463 , denotes ,
T14038 463-467 WRB denotes when
T14039 468-476 VBN denotes compared
T14040 477-479 IN denotes to
T14041 480-483 DT denotes the
T14042 498-505 NNS denotes mutants
T14043 484-497 VBG denotes corresponding
T14044 506-508 IN denotes of
T14045 509-513 NN denotes Alk5
T14046 513-515 , denotes ,
T14047 515-520 WDT denotes which
T14048 521-528 VBZ denotes encodes
T14049 529-532 DT denotes the
T14050 546-554 NN denotes receptor
T14051 533-536 NN denotes TGF
T14052 537-538 NN denotes β
T14053 536-537 HYPH denotes -
T14054 539-543 NN denotes type
T14055 544-545 CD denotes I
T14056 554-556 , denotes ,
T14057 556-557 DT denotes a
T14058 579-586 NN denotes partner
T14059 558-570 JJ denotes prototypical
T14060 571-578 NN denotes binding
T14061 587-589 IN denotes of
T14062 590-593 NN denotes TGF
T14063 594-598 NN denotes βRII
T14064 593-594 HYPH denotes -
T14065 599-600 -LRB- denotes [
T14066 600-602 CD denotes 19
T14067 602-603 -RRB- denotes ]
T14068 604-607 CC denotes and
T14069 608-611 DT denotes the
T14070 620-625 NN denotes study
T14071 612-619 JJ denotes present
T14072 625-626 -RRB- denotes )
T14073 626-627 . denotes .
T14074 627-920 sentence denotes While Tgfbr2/Wnt1-Cre mutants as well as mice deficient in Tgf-β2 display the PTA type A4 (truncus arteriosus with interrupted aortic arch [30]), Alk5/Wnt1-Cre mutants reported here demonstrate earlier patterning defects of the PAAs, which is particularly obvious in the 3rd pair of the PAAs.
T14075 628-633 IN denotes While
T14076 694-701 VBP denotes display
T14077 634-640 NN denotes Tgfbr2
T14078 646-649 NN denotes Cre
T14079 640-641 HYPH denotes /
T14080 641-645 NN denotes Wnt1
T14081 645-646 HYPH denotes -
T14082 650-657 NNS denotes mutants
T14083 658-660 RB denotes as
T14084 666-668 IN denotes as
T14085 661-665 RB denotes well
T14086 669-673 NNS denotes mice
T14087 674-683 JJ denotes deficient
T14088 684-686 IN denotes in
T14089 687-690 NN denotes Tgf
T14090 691-693 NN denotes β2
T14091 690-691 HYPH denotes -
T14092 810-821 VBP denotes demonstrate
T14093 702-705 DT denotes the
T14094 715-717 NN denotes A4
T14095 706-709 NN denotes PTA
T14096 710-714 NN denotes type
T14097 718-719 -LRB- denotes (
T14098 719-726 NN denotes truncus
T14099 727-737 NN denotes arteriosus
T14100 738-742 IN denotes with
T14101 743-754 VBN denotes interrupted
T14102 762-766 NN denotes arch
T14103 755-761 JJ denotes aortic
T14104 767-768 -LRB- denotes [
T14105 768-770 CD denotes 30
T14106 770-771 -RRB- denotes ]
T14107 771-772 -RRB- denotes )
T14108 772-774 , denotes ,
T14109 774-778 NN denotes Alk5
T14110 784-787 NN denotes Cre
T14111 778-779 HYPH denotes /
T14112 779-783 NN denotes Wnt1
T14113 783-784 HYPH denotes -
T14114 788-795 NNS denotes mutants
T14115 796-804 VBN denotes reported
T14116 805-809 RB denotes here
T14117 822-829 JJR denotes earlier
T14118 841-848 NNS denotes defects
T14119 830-840 NN denotes patterning
T14120 849-851 IN denotes of
T14121 852-855 DT denotes the
T14122 856-860 NNS denotes PAAs
T14123 860-862 , denotes ,
T14124 862-867 WDT denotes which
T14125 868-870 VBZ denotes is
T14126 871-883 RB denotes particularly
T14127 884-891 JJ denotes obvious
T14128 892-894 IN denotes in
T14129 895-898 DT denotes the
T14130 903-907 NN denotes pair
T14131 899-902 JJ denotes 3rd
T14132 908-910 IN denotes of
T14133 911-914 DT denotes the
T14134 915-919 NNS denotes PAAs
T14135 919-920 . denotes .
T14136 920-1145 sentence denotes Moreover, the Alk5/Wnt1-Cre mutants display an abnormal patterning of the aortic sac and defective AP septation leading to PTA, reminiscent of type A2 (= truncus artriosus with no main pulmonary artery segment present [30]).
T14137 921-929 RB denotes Moreover
T14138 957-964 VBP denotes display
T14139 929-931 , denotes ,
T14140 931-934 DT denotes the
T14141 949-956 NNS denotes mutants
T14142 935-939 NN denotes Alk5
T14143 945-948 NN denotes Cre
T14144 939-940 HYPH denotes /
T14145 940-944 NN denotes Wnt1
T14146 944-945 HYPH denotes -
T14147 965-967 DT denotes an
T14148 977-987 NN denotes patterning
T14149 968-976 JJ denotes abnormal
T14150 988-990 IN denotes of
T14151 991-994 DT denotes the
T14152 1002-1005 NN denotes sac
T14153 995-1001 JJ denotes aortic
T14154 1006-1009 CC denotes and
T14155 1010-1019 JJ denotes defective
T14156 1023-1032 NN denotes septation
T14157 1020-1022 NN denotes AP
T14158 1033-1040 VBG denotes leading
T14159 1041-1043 IN denotes to
T14160 1044-1047 NN denotes PTA
T14161 1047-1049 , denotes ,
T14162 1049-1060 JJ denotes reminiscent
T14163 1061-1063 IN denotes of
T14164 1064-1068 NN denotes type
T14165 1069-1071 NN denotes A2
T14166 1072-1073 -LRB- denotes (
T14167 1073-1074 SYM denotes =
T14168 1083-1092 NN denotes artriosus
T14169 1075-1082 NN denotes truncus
T14170 1093-1097 IN denotes with
T14171 1098-1100 DT denotes no
T14172 1123-1130 NN denotes segment
T14173 1101-1105 JJ denotes main
T14174 1106-1115 JJ denotes pulmonary
T14175 1116-1122 NN denotes artery
T14176 1131-1138 JJ denotes present
T14177 1139-1140 -LRB- denotes [
T14178 1140-1142 CD denotes 30
T14179 1142-1143 -RRB- denotes ]
T14180 1143-1144 -RRB- denotes )
T14181 1144-1145 . denotes .
T14182 1145-1389 sentence denotes However, our results also demonstrate that significant hypoplasia of the aortic sac leads to a severe shortening of the ascending truncal arch, which masks possible defects in derivatives of the 4th PAAs, i.e., interruption of the aortic arch.
T14183 1146-1153 RB denotes However
T14184 1172-1183 VBP denotes demonstrate
T14185 1153-1155 , denotes ,
T14186 1155-1158 PRP$ denotes our
T14187 1159-1166 NNS denotes results
T14188 1167-1171 RB denotes also
T14189 1184-1188 IN denotes that
T14190 1230-1235 VBZ denotes leads
T14191 1189-1200 JJ denotes significant
T14192 1201-1211 NN denotes hypoplasia
T14193 1212-1214 IN denotes of
T14194 1215-1218 DT denotes the
T14195 1226-1229 NN denotes sac
T14196 1219-1225 JJ denotes aortic
T14197 1236-1238 IN denotes to
T14198 1239-1240 DT denotes a
T14199 1248-1258 NN denotes shortening
T14200 1241-1247 JJ denotes severe
T14201 1259-1261 IN denotes of
T14202 1262-1265 DT denotes the
T14203 1284-1288 NN denotes arch
T14204 1266-1275 VBG denotes ascending
T14205 1276-1283 JJ denotes truncal
T14206 1288-1290 , denotes ,
T14207 1290-1295 WDT denotes which
T14208 1296-1301 VBZ denotes masks
T14209 1302-1310 JJ denotes possible
T14210 1311-1318 NNS denotes defects
T14211 1319-1321 IN denotes in
T14212 1322-1333 NNS denotes derivatives
T14213 1334-1336 IN denotes of
T14214 1337-1340 DT denotes the
T14215 1345-1349 NNS denotes PAAs
T14216 1341-1344 JJ denotes 4th
T14217 1349-1351 , denotes ,
T14218 1351-1355 FW denotes i.e.
T14219 1357-1369 NN denotes interruption
T14220 1355-1357 , denotes ,
T14221 1370-1372 IN denotes of
T14222 1373-1376 DT denotes the
T14223 1384-1388 NN denotes arch
T14224 1377-1383 JJ denotes aortic
T14225 1388-1389 . denotes .
T14226 1389-1635 sentence denotes These observed differences are likely due to substantial apoptosis of Alk5-deficient post-migratory neural crest cells, which is clearly detectable at E10.5, whereas similar intense cell death has not been reported in Tgfbr2/Wnt1-Cre mutants[9].
T14227 1390-1395 DT denotes These
T14228 1405-1416 NNS denotes differences
T14229 1396-1404 VBN denotes observed
T14230 1417-1420 VBP denotes are
T14231 1421-1427 RB denotes likely
T14232 1428-1431 IN denotes due
T14233 1432-1434 IN denotes to
T14234 1435-1446 JJ denotes substantial
T14235 1447-1456 NN denotes apoptosis
T14236 1457-1459 IN denotes of
T14237 1460-1464 NN denotes Alk5
T14238 1465-1474 JJ denotes deficient
T14239 1464-1465 HYPH denotes -
T14240 1503-1508 NNS denotes cells
T14241 1475-1489 JJ denotes post-migratory
T14242 1490-1496 JJ denotes neural
T14243 1497-1502 NN denotes crest
T14244 1508-1510 , denotes ,
T14245 1510-1515 WDT denotes which
T14246 1516-1518 VBZ denotes is
T14247 1519-1526 RB denotes clearly
T14248 1527-1537 JJ denotes detectable
T14249 1538-1540 IN denotes at
T14250 1541-1546 NN denotes E10.5
T14251 1546-1548 , denotes ,
T14252 1548-1555 IN denotes whereas
T14253 1596-1604 VBN denotes reported
T14254 1556-1563 JJ denotes similar
T14256 1564-1571 JJ denotes intense
T14257 1572-1576 NN denotes cell
T14258 1583-1586 VBZ denotes has
T14259 1587-1590 RB denotes not
T14260 1591-1595 VBN denotes been
T14261 1605-1607 IN denotes in
T14262 1608-1614 NN denotes Tgfbr2
T14263 1620-1623 NN denotes Cre
T14264 1614-1615 HYPH denotes /
T14265 1615-1619 NN denotes Wnt1
T14266 1619-1620 HYPH denotes -
T14267 1624-1631 NNS denotes mutants
T14268 1631-1632 -LRB- denotes [
T14269 1632-1633 CD denotes 9
T14270 1633-1634 -RRB- denotes ]
T14271 1634-1635 . denotes .
T14255 1577-1582 NN denotes death
R3452 T13939 T13940 prep During,proven
R3453 T13941 T13942 det the,years
R3454 T13942 T13939 pobj years,During
R3455 T13943 T13942 amod last,years
R3456 T13944 T13942 amod few,years
R3457 T13945 T13946 det the,line
R3458 T13946 T13940 nsubj line,proven
R3459 T13947 T13948 compound Wnt1,Cre
R3460 T13948 T13950 npadvmod Cre,transgenic
R3461 T13949 T13948 punct -,Cre
R3462 T13950 T13946 amod transgenic,line
R3463 T13951 T13946 compound driver,line
R3464 T13952 T13940 aux has,proven
R3465 T13953 T13954 aux to,be
R3466 T13954 T13940 xcomp be,proven
R3467 T13955 T13956 det a,tool
R3468 T13956 T13954 attr tool,be
R3469 T13957 T13956 amod powerful,tool
R3470 T13958 T13956 prep for,tool
R3471 T13959 T13960 npadvmod tissue,specific
R3472 T13960 T13962 amod specific,deletion
R3473 T13961 T13960 punct -,specific
R3474 T13962 T13958 pobj deletion,for
R3475 T13963 T13962 compound gene,deletion
R3476 T13964 T13962 prep in,deletion
R3477 T13965 T13964 pobj NCCs,in
R3478 T13966 T13967 punct [,28
R3479 T13967 T13954 parataxis 28,be
R3480 T13968 T13967 nummod 12,28
R3481 T13969 T13967 punct ",",28
R3482 T13970 T13967 nummod 13,28
R3483 T13971 T13967 punct ",",28
R3484 T13972 T13967 nummod 27,28
R3485 T13973 T13967 punct ",",28
R3486 T13974 T13967 punct ],28
R3487 T13975 T13940 punct .,proven
R3488 T13977 T13978 advcl Using,shown
R3489 T13979 T13980 det this,approach
R3490 T13980 T13977 dobj approach,Using
R3491 T13981 T13978 punct ", ",shown
R3492 T13982 T13983 amod several,studies
R3493 T13983 T13978 nsubj studies,shown
R3494 T13984 T13978 aux have,shown
R3495 T13985 T13978 advmod independently,shown
R3496 T13986 T13987 mark that,leads
R3497 T13987 T13978 ccomp leads,shown
R3498 T13988 T13989 det the,deletion
R3499 T13989 T13987 nsubj deletion,leads
R3500 T13990 T13991 npadvmod NC,specific
R3501 T13991 T13989 amod specific,deletion
R3502 T13992 T13991 punct -,specific
R3503 T13993 T13989 prep of,deletion
R3504 T13994 T13995 det the,gene
R3505 T13995 T13993 pobj gene,of
R3506 T13996 T13995 compound Tgfbr2,gene
R3507 T13997 T13987 prep to,leads
R3508 T13998 T13999 det a,set
R3509 T13999 T13997 pobj set,to
R3510 T14000 T13999 amod distinct,set
R3511 T14001 T13999 prep of,set
R3512 T14002 T14003 amod calvarial,defects
R3513 T14003 T14001 pobj defects,of
R3514 T14004 T14002 punct ", ",calvarial
R3515 T14005 T14002 conj facial,calvarial
R3516 T14006 T14005 cc and,facial
R3517 T14007 T14005 conj cardiac,facial
R3518 T14008 T14009 punct [,29
R3519 T14009 T13978 parataxis 29,shown
R3520 T14010 T14009 nummod 8,29
R3521 T14011 T14009 punct ",",29
R3522 T14012 T14009 nummod 9,29
R3523 T14013 T14009 punct ",",29
R3524 T14014 T14009 nummod 20,29
R3525 T14015 T14009 punct ",",29
R3526 T14016 T14009 punct ],29
R3527 T14017 T13978 punct .,shown
R3528 T14019 T14020 advmod Interestingly,appear
R3529 T14021 T14020 punct ", ",appear
R3530 T14022 T14023 det these,defects
R3531 T14023 T14020 nsubj defects,appear
R3532 T14024 T14025 advmod quite,different
R3533 T14025 T14020 oprd different,appear
R3534 T14026 T14027 preconj both,in
R3535 T14027 T14020 prep in,appear
R3536 T14028 T14029 det the,regions
R3537 T14029 T14027 pobj regions,in
R3538 T14030 T14029 amod craniofacial,regions
R3539 T14031 T14030 cc and,craniofacial
R3540 T14032 T14030 conj pharyngeal,craniofacial
R3541 T14033 T14029 punct ", ",regions
R3542 T14034 T14029 prep including,regions
R3543 T14035 T14036 det the,heart
R3544 T14036 T14034 pobj heart,including
R3545 T14037 T14020 punct ", ",appear
R3546 T14038 T14039 advmod when,compared
R3547 T14039 T14020 advcl compared,appear
R3548 T14040 T14039 prep to,compared
R3549 T14041 T14042 det the,mutants
R3550 T14042 T14040 pobj mutants,to
R3551 T14043 T14042 amod corresponding,mutants
R3552 T14044 T14042 prep of,mutants
R3553 T14045 T14044 pobj Alk5,of
R3554 T14046 T14042 punct ", ",mutants
R3555 T14047 T14048 dep which,encodes
R3556 T14048 T14042 relcl encodes,mutants
R3557 T14049 T14050 det the,receptor
R3558 T14050 T14048 dobj receptor,encodes
R3559 T14051 T14052 nmod TGF,β
R3560 T14052 T14050 nmod β,receptor
R3561 T14053 T14052 punct -,β
R3562 T14054 T14050 nmod type,receptor
R3563 T14055 T14054 nummod I,type
R3564 T14056 T14050 punct ", ",receptor
R3565 T14057 T14058 det a,partner
R3566 T14058 T14050 appos partner,receptor
R3567 T14059 T14058 amod prototypical,partner
R3568 T14060 T14058 compound binding,partner
R3569 T14061 T14058 prep of,partner
R3570 T14062 T14063 compound TGF,βRII
R3571 T14063 T14061 pobj βRII,of
R3572 T14064 T14063 punct -,βRII
R3573 T14065 T14066 punct [,19
R3574 T14066 T14039 parataxis 19,compared
R3575 T14067 T14066 punct ],19
R3576 T14068 T14066 cc and,19
R3577 T14069 T14070 det the,study
R3578 T14070 T14066 conj study,19
R3579 T14071 T14070 amod present,study
R3580 T14072 T14066 punct ),19
R3581 T14073 T14020 punct .,appear
R3582 T14075 T14076 mark While,display
R3583 T14076 T14092 advcl display,demonstrate
R3584 T14077 T14078 compound Tgfbr2,Cre
R3585 T14078 T14082 compound Cre,mutants
R3586 T14079 T14078 punct /,Cre
R3587 T14080 T14078 compound Wnt1,Cre
R3588 T14081 T14078 punct -,Cre
R3589 T14082 T14076 nsubj mutants,display
R3590 T14083 T14084 advmod as,as
R3591 T14084 T14082 cc as,mutants
R3592 T14085 T14084 advmod well,as
R3593 T14086 T14082 conj mice,mutants
R3594 T14087 T14086 amod deficient,mice
R3595 T14088 T14087 prep in,deficient
R3596 T14089 T14090 compound Tgf,β2
R3597 T14090 T14088 pobj β2,in
R3598 T14091 T14090 punct -,β2
R3599 T14093 T14094 det the,A4
R3600 T14094 T14076 dobj A4,display
R3601 T14095 T14094 compound PTA,A4
R3602 T14096 T14094 compound type,A4
R3603 T14097 T14094 punct (,A4
R3604 T14098 T14099 compound truncus,arteriosus
R3605 T14099 T14094 appos arteriosus,A4
R3606 T14100 T14099 prep with,arteriosus
R3607 T14101 T14102 amod interrupted,arch
R3608 T14102 T14100 pobj arch,with
R3609 T14103 T14102 amod aortic,arch
R3610 T14104 T14105 punct [,30
R3611 T14105 T14076 parataxis 30,display
R3612 T14106 T14105 punct ],30
R3613 T14107 T14092 punct ),demonstrate
R3614 T14108 T14092 punct ", ",demonstrate
R3615 T14109 T14110 compound Alk5,Cre
R3616 T14110 T14114 compound Cre,mutants
R3617 T14111 T14110 punct /,Cre
R3618 T14112 T14110 compound Wnt1,Cre
R3619 T14113 T14110 punct -,Cre
R3620 T14114 T14092 nsubj mutants,demonstrate
R3621 T14115 T14114 acl reported,mutants
R3622 T14116 T14115 advmod here,reported
R3623 T14117 T14118 amod earlier,defects
R3624 T14118 T14092 dobj defects,demonstrate
R3625 T14119 T14118 compound patterning,defects
R3626 T14120 T14118 prep of,defects
R3627 T14121 T14122 det the,PAAs
R3628 T14122 T14120 pobj PAAs,of
R3629 T14123 T14118 punct ", ",defects
R3630 T14124 T14125 dep which,is
R3631 T14125 T14118 relcl is,defects
R3632 T14126 T14127 advmod particularly,obvious
R3633 T14127 T14125 acomp obvious,is
R3634 T14128 T14125 prep in,is
R3635 T14129 T14130 det the,pair
R3636 T14130 T14128 pobj pair,in
R3637 T14131 T14130 amod 3rd,pair
R3638 T14132 T14130 prep of,pair
R3639 T14133 T14134 det the,PAAs
R3640 T14134 T14132 pobj PAAs,of
R3641 T14135 T14092 punct .,demonstrate
R3642 T14137 T14138 advmod Moreover,display
R3643 T14139 T14138 punct ", ",display
R3644 T14140 T14141 det the,mutants
R3645 T14141 T14138 nsubj mutants,display
R3646 T14142 T14143 compound Alk5,Cre
R3647 T14143 T14141 compound Cre,mutants
R3648 T14144 T14143 punct /,Cre
R3649 T14145 T14143 compound Wnt1,Cre
R3650 T14146 T14143 punct -,Cre
R3651 T14147 T14148 det an,patterning
R3652 T14148 T14138 dobj patterning,display
R3653 T14149 T14148 amod abnormal,patterning
R3654 T14150 T14148 prep of,patterning
R3655 T14151 T14152 det the,sac
R3656 T14152 T14150 pobj sac,of
R3657 T14153 T14152 amod aortic,sac
R3658 T14154 T14148 cc and,patterning
R3659 T14155 T14156 amod defective,septation
R3660 T14156 T14148 conj septation,patterning
R3661 T14157 T14156 compound AP,septation
R3662 T14158 T14156 acl leading,septation
R3663 T14159 T14158 prep to,leading
R3664 T14160 T14159 pobj PTA,to
R3665 T14161 T14148 punct ", ",patterning
R3666 T14162 T14148 amod reminiscent,patterning
R3667 T14163 T14162 prep of,reminiscent
R3668 T14164 T14165 compound type,A2
R3669 T14165 T14163 pobj A2,of
R3670 T14166 T14165 punct (,A2
R3671 T14167 T14168 punct =,artriosus
R3672 T14168 T14165 acl artriosus,A2
R3673 T14169 T14168 compound truncus,artriosus
R3674 T14170 T14168 prep with,artriosus
R3675 T14171 T14172 det no,segment
R3676 T14172 T14170 pobj segment,with
R3677 T14173 T14172 amod main,segment
R3678 T14174 T14172 amod pulmonary,segment
R3679 T14175 T14172 compound artery,segment
R3680 T14176 T14172 amod present,segment
R3681 T14177 T14178 punct [,30
R3682 T14178 T14148 parataxis 30,patterning
R3683 T14179 T14178 punct ],30
R3684 T14180 T14138 punct ),display
R3685 T14181 T14138 punct .,display
R3686 T14183 T14184 advmod However,demonstrate
R3687 T14185 T14184 punct ", ",demonstrate
R3688 T14186 T14187 poss our,results
R3689 T14187 T14184 nsubj results,demonstrate
R3690 T14188 T14184 advmod also,demonstrate
R3691 T14189 T14190 mark that,leads
R3692 T14190 T14184 ccomp leads,demonstrate
R3693 T14191 T14192 amod significant,hypoplasia
R3694 T14192 T14190 nsubj hypoplasia,leads
R3695 T14193 T14192 prep of,hypoplasia
R3696 T14194 T14195 det the,sac
R3697 T14195 T14193 pobj sac,of
R3698 T14196 T14195 amod aortic,sac
R3699 T14197 T14190 prep to,leads
R3700 T14198 T14199 det a,shortening
R3701 T14199 T14197 pobj shortening,to
R3702 T14200 T14199 amod severe,shortening
R3703 T14201 T14199 prep of,shortening
R3704 T14202 T14203 det the,arch
R3705 T14203 T14201 pobj arch,of
R3706 T14204 T14203 amod ascending,arch
R3707 T14205 T14203 amod truncal,arch
R3708 T14206 T14199 punct ", ",shortening
R3709 T14207 T14208 dep which,masks
R3710 T14208 T14199 relcl masks,shortening
R3711 T14209 T14210 amod possible,defects
R3712 T14210 T14208 dobj defects,masks
R3713 T14211 T14210 prep in,defects
R3714 T14212 T14211 pobj derivatives,in
R3715 T14213 T14212 prep of,derivatives
R3716 T14214 T14215 det the,PAAs
R3717 T14215 T14213 pobj PAAs,of
R3718 T14216 T14215 amod 4th,PAAs
R3719 T14217 T14210 punct ", ",defects
R3720 T14218 T14219 advmod i.e.,interruption
R3721 T14219 T14210 appos interruption,defects
R3722 T14220 T14219 punct ", ",interruption
R3723 T14221 T14219 prep of,interruption
R3724 T14222 T14223 det the,arch
R3725 T14223 T14221 pobj arch,of
R3726 T14224 T14223 amod aortic,arch
R3727 T14225 T14184 punct .,demonstrate
R3728 T14227 T14228 det These,differences
R3729 T14228 T14230 nsubj differences,are
R3730 T14229 T14228 amod observed,differences
R3731 T14231 T14232 advmod likely,due
R3732 T14232 T14230 prep due,are
R3733 T14233 T14232 pcomp to,due
R3734 T14234 T14235 amod substantial,apoptosis
R3735 T14235 T14232 pobj apoptosis,due
R3736 T14236 T14235 prep of,apoptosis
R3737 T14237 T14238 npadvmod Alk5,deficient
R3738 T14238 T14240 amod deficient,cells
R3739 T14239 T14238 punct -,deficient
R3740 T14240 T14236 pobj cells,of
R3741 T14241 T14240 amod post-migratory,cells
R3742 T14242 T14243 amod neural,crest
R3743 T14243 T14240 compound crest,cells
R3744 T14244 T14235 punct ", ",apoptosis
R3745 T14245 T14246 dep which,is
R3746 T14246 T14235 relcl is,apoptosis
R3747 T14247 T14248 advmod clearly,detectable
R3748 T14248 T14246 acomp detectable,is
R3749 T14249 T14246 prep at,is
R3750 T14250 T14249 pobj E10.5,at
R3751 T14251 T14246 punct ", ",is
R3752 T14252 T14253 mark whereas,reported
R3753 T14253 T14246 advcl reported,is
R3754 T14254 T14255 amod similar,death
R3755 T14255 T14253 nsubjpass death,reported
R3756 T14256 T14255 amod intense,death
R3757 T14257 T14255 compound cell,death
R3758 T14258 T14253 aux has,reported
R3759 T14259 T14253 neg not,reported
R3760 T14260 T14253 auxpass been,reported
R3761 T14261 T14253 prep in,reported
R3762 T14262 T14263 compound Tgfbr2,Cre
R3763 T14263 T14267 compound Cre,mutants
R3764 T14264 T14263 punct /,Cre
R3765 T14265 T14263 compound Wnt1,Cre
R3766 T14266 T14263 punct -,Cre
R3767 T14267 T14261 pobj mutants,in
R3768 T14268 T14269 punct [,9
R3769 T14269 T14230 parataxis 9,are
R3770 T14270 T14269 punct ],9
R3771 T14271 T14230 punct .,are

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T13673 30-34 PR_EXT:000017435 denotes Wnt1
T13674 39-49 SO_EXT:transgenic_entity denotes transgenic
T13675 99-105 UBERON:0000479 denotes tissue
T13676 115-119 SO_EXT:0000704 denotes gene
T13677 120-128 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T13678 132-136 CL_EXT:neural_crest_cell denotes NCCs
T13679 223-225 UBERON:0002342 denotes NC
T13680 235-243 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T13681 251-257 GO_PR_EXT:transforming_growth_factor_beta_receptor_type_II denotes Tgfbr2
T13682 258-262 SO_EXT:0000704 denotes gene
T13683 290-299 UBERON:0004339 denotes calvarial
T13684 301-307 UBERON:0001456 denotes facial
T13685 312-319 UBERON:0000948 denotes cardiac
T13686 405-417 UBERON_EXT:face_or_skull denotes craniofacial
T13687 422-432 UBERON:0006562 denotes pharyngeal
T13688 456-461 UBERON:0000948 denotes heart
T13689 498-505 SO_EXT:sequence_altered_entity denotes mutants
T13690 509-513 PR_EXT:000000047 denotes Alk5
T13691 521-528 SO_EXT:sequence_coding_function denotes encodes
T13692 533-554 GO_PR_EXT:transforming_growth_factor_beta_receptor_type_I denotes TGF-β type I receptor
T13693 571-578 CHEMINF_GO_EXT:chemical_binding_or_bond_formation denotes binding
T13694 590-598 GO_PR_EXT:transforming_growth_factor_beta_receptor_type_II denotes TGF-βRII
T13695 634-640 GO_PR_EXT:transforming_growth_factor_beta_receptor_type_II denotes Tgfbr2
T13696 641-645 PR_EXT:000017435 denotes Wnt1
T13697 650-657 SO_EXT:sequence_altered_entity denotes mutants
T13698 669-673 NCBITaxon:10088 denotes mice
T13699 687-693 GO_PR_EXT:transforming_growth_factor_beta_receptor_type_II denotes Tgf-β2
T13700 719-737 UBERON:0002061 denotes truncus arteriosus
T13701 755-766 UBERON:0001508 denotes aortic arch
T13702 774-778 PR_EXT:000000047 denotes Alk5
T13703 779-783 PR_EXT:000017435 denotes Wnt1
T13704 788-795 SO_EXT:sequence_altered_entity denotes mutants
T13705 830-840 GO_PATO_EXT:biological_patterning_process_or_quality denotes patterning
T13706 856-860 UBERON:0004363 denotes PAAs
T13707 915-919 UBERON:0004363 denotes PAAs
T13708 935-939 PR_EXT:000000047 denotes Alk5
T13709 940-944 PR_EXT:000017435 denotes Wnt1
T13710 949-956 SO_EXT:sequence_altered_entity denotes mutants
T13711 977-987 GO_PATO_EXT:biological_patterning_process_or_quality denotes patterning
T13712 995-1005 UBERON:0005432 denotes aortic sac
T13713 1075-1092 UBERON:0002061 denotes truncus artriosus
T13714 1106-1122 UBERON:0002012 denotes pulmonary artery
T13715 1219-1229 UBERON:0005432 denotes aortic sac
T13716 1276-1283 UBERON:0002061 denotes truncal
T13717 1341-1349 UBERON:0003121 denotes 4th PAAs
T13718 1377-1388 UBERON:0004363 denotes aortic arch
T13719 1447-1459 _FRAGMENT denotes apoptosis of
T13720 1503-1508 GO:0006915 denotes cells
T13721 1460-1464 PR_EXT:000000047 denotes Alk5
T13722 1480-1489 GO_EXT:biological_movement_or_translocation_process denotes migratory
T13723 1490-1502 UBERON:0002342 denotes neural crest
T13724 1490-1508 CL_EXT:neural_crest_cell denotes neural crest cells
T13725 1503-1508 CL_GO_EXT:cell denotes cells
T13726 1572-1576 CL_GO_EXT:cell denotes cell
T13727 1572-1582 GO:0008219 denotes cell death
T13728 1608-1614 GO_PR_EXT:transforming_growth_factor_beta_receptor_type_II denotes Tgfbr2
T13729 1615-1619 PR_EXT:000017435 denotes Wnt1
T13730 1624-1631 SO_EXT:sequence_altered_entity denotes mutants
R3440 T13720 T13719 _lexicallyChainedTo cells,apoptosis of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T13492 30-34 PR:000017435 denotes Wnt1
T13493 99-105 UBERON:0000479 denotes tissue
T13494 115-119 SO:0000704 denotes gene
T13495 223-225 UBERON:0002342 denotes NC
T13496 258-262 SO:0000704 denotes gene
T13497 290-299 UBERON:0004339 denotes calvarial
T13498 301-307 UBERON:0001456 denotes facial
T13499 312-319 UBERON:0000948 denotes cardiac
T13500 422-432 UBERON:0006562 denotes pharyngeal
T13501 456-461 UBERON:0000948 denotes heart
T13502 509-513 PR:000000047 denotes Alk5
T13503 533-538 PR:000000046 denotes TGF-β
T13504 641-645 PR:000017435 denotes Wnt1
T13505 669-673 NCBITaxon:10088 denotes mice
T13506 687-693 PR:000000183 denotes Tgf-β2
T13507 719-737 UBERON:0002061 denotes truncus arteriosus
T13508 755-766 UBERON:0001508 denotes aortic arch
T13509 774-778 PR:000000047 denotes Alk5
T13510 779-783 PR:000017435 denotes Wnt1
T13511 856-860 UBERON:0004363 denotes PAAs
T13512 915-919 UBERON:0004363 denotes PAAs
T13513 935-939 PR:000000047 denotes Alk5
T13514 940-944 PR:000017435 denotes Wnt1
T13515 995-1005 UBERON:0005432 denotes aortic sac
T13516 1075-1092 UBERON:0002061 denotes truncus artriosus
T13517 1106-1122 UBERON:0002012 denotes pulmonary artery
T13518 1219-1229 UBERON:0005432 denotes aortic sac
T13519 1276-1283 UBERON:0002061 denotes truncal
T13520 1341-1349 UBERON:0003121 denotes 4th PAAs
T13521 1377-1388 UBERON:0004363 denotes aortic arch
T13522 1447-1459 _FRAGMENT denotes apoptosis of
T13523 1503-1508 GO:0006915 denotes cells
T13524 1460-1464 PR:000000047 denotes Alk5
T13525 1490-1502 UBERON:0002342 denotes neural crest
T13526 1572-1582 GO:0008219 denotes cell death
T13527 1615-1619 PR:000017435 denotes Wnt1
R3431 T13523 T13522 _lexicallyChainedTo cells,apoptosis of