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PMC:1617083 / 3934-4975 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T3361 0-4 JJ denotes Many
T3362 85-95 VBN denotes classified
T3363 5-7 IN denotes of
T3364 8-11 DT denotes the
T3365 35-42 NNS denotes strains
T3366 12-21 JJ denotes available
T3367 22-28 JJ denotes inbred
T3368 29-34 NN denotes mouse
T3369 42-44 , denotes ,
T3370 44-48 JJ denotes such
T3371 49-51 IN denotes as
T3372 52-57 NN denotes C57BL
T3373 58-60 NN denotes 6J
T3374 57-58 HYPH denotes /
T3375 61-62 -LRB- denotes (
T3376 62-64 NN denotes B6
T3377 64-65 -RRB- denotes )
T3378 66-69 CC denotes and
T3379 70-71 NN denotes A
T3380 72-73 NN denotes J
T3381 71-72 HYPH denotes /
T3382 73-75 , denotes ,
T3383 75-79 VBP denotes have
T3384 80-84 VBN denotes been
T3385 96-98 IN denotes as
T3386 99-108 JJ denotes resistant
T3387 109-111 CC denotes or
T3388 112-123 JJ denotes susceptible
T3389 124-126 IN denotes to
T3390 127-137 JJ denotes particular
T3391 146-154 NNS denotes diseases
T3392 138-145 JJ denotes complex
T3393 155-156 -LRB- denotes (
T3394 156-161 NN denotes Table
T3395 162-163 CD denotes 1
T3396 163-164 -RRB- denotes )
T3397 164-165 . denotes .
T3398 165-490 sentence denotes These two strains have diverse responses to diet-induced obesity [8] (B6 susceptible; A/J resistant), diet-induced atherosclerosis (B6 susceptible; A/J resistant) [9], arterial ligation-induced neointimal hyperplasia (B6 resistant; A/J resistant), and ligation induced vessel remodeling (B6 resistant; A/J susceptible) [10].
T3399 166-171 DT denotes These
T3400 176-183 NNS denotes strains
T3401 172-175 CD denotes two
T3402 184-188 VBP denotes have
T3403 189-196 JJ denotes diverse
T3404 197-206 NNS denotes responses
T3405 207-209 IN denotes to
T3406 210-214 NN denotes diet
T3407 215-222 VBN denotes induced
T3408 214-215 HYPH denotes -
T3409 223-230 NN denotes obesity
T3410 231-232 -LRB- denotes [
T3411 232-233 CD denotes 8
T3412 233-234 -RRB- denotes ]
T3413 235-236 -LRB- denotes (
T3414 256-265 JJ denotes resistant
T3415 236-238 NN denotes B6
T3416 239-250 JJ denotes susceptible
T3417 250-251 : denotes ;
T3418 252-253 NN denotes A
T3419 254-255 NN denotes J
T3420 253-254 HYPH denotes /
T3421 265-266 -RRB- denotes )
T3422 266-268 , denotes ,
T3423 268-272 NN denotes diet
T3424 273-280 VBN denotes induced
T3425 272-273 HYPH denotes -
T3426 281-296 NN denotes atherosclerosis
T3427 297-298 -LRB- denotes (
T3428 318-327 JJ denotes resistant
T3429 298-300 NN denotes B6
T3430 301-312 JJ denotes susceptible
T3431 312-313 : denotes ;
T3432 314-315 NN denotes A
T3433 316-317 NN denotes J
T3434 315-316 HYPH denotes /
T3435 327-328 -RRB- denotes )
T3436 329-330 -LRB- denotes [
T3437 330-331 CD denotes 9
T3438 331-332 -RRB- denotes ]
T3439 332-334 , denotes ,
T3440 334-342 JJ denotes arterial
T3441 343-351 NN denotes ligation
T3442 352-359 VBN denotes induced
T3443 351-352 HYPH denotes -
T3444 371-382 NN denotes hyperplasia
T3445 360-370 JJ denotes neointimal
T3446 383-384 -LRB- denotes (
T3447 402-411 JJ denotes resistant
T3448 384-386 NN denotes B6
T3449 387-396 JJ denotes resistant
T3450 396-397 : denotes ;
T3451 398-399 NN denotes A
T3452 400-401 NN denotes J
T3453 399-400 HYPH denotes /
T3454 411-412 -RRB- denotes )
T3455 412-414 , denotes ,
T3456 414-417 CC denotes and
T3457 418-426 NN denotes ligation
T3458 427-434 VBN denotes induced
T3459 442-452 NN denotes remodeling
T3460 435-441 NN denotes vessel
T3461 453-454 -LRB- denotes (
T3462 486-488 CD denotes 10
T3463 454-456 NN denotes B6
T3464 457-466 JJ denotes resistant
T3467 470-471 NN denotes J
T3468 469-470 HYPH denotes /
T3469 472-483 JJ denotes susceptible
T3470 483-484 -RRB- denotes )
T3471 485-486 -LRB- denotes [
T3472 488-489 -RRB- denotes ]
T3473 489-490 . denotes .
T3474 490-616 sentence denotes These conditions are predisposing to thrombosis per se, but these mice have not been systematically evaluated for thrombosis.
T3475 491-496 DT denotes These
T3476 497-507 NNS denotes conditions
T3477 508-511 VBP denotes are
T3478 512-524 VBG denotes predisposing
T3479 525-527 IN denotes to
T3480 528-538 NN denotes thrombosis
T3481 539-542 FW denotes per
T3482 543-545 FW denotes se
T3483 545-547 , denotes ,
T3484 547-550 CC denotes but
T3485 551-556 DT denotes these
T3486 557-561 NNS denotes mice
T3487 591-600 VBN denotes evaluated
T3488 562-566 VBP denotes have
T3489 567-570 RB denotes not
T3490 571-575 VBN denotes been
T3491 576-590 RB denotes systematically
T3492 601-604 IN denotes for
T3493 605-615 NN denotes thrombosis
T3494 615-616 . denotes .
T3495 616-753 sentence denotes Clot formation and lysis, which ultimately determine thrombosis, requires platelet aggregation, coagulation, and fibrinolytic functions.
T3496 617-621 NN denotes Clot
T3497 622-631 NN denotes formation
T3498 682-690 VBZ denotes requires
T3499 632-635 CC denotes and
T3500 636-641 NN denotes lysis
T3501 641-643 , denotes ,
T3502 643-648 WDT denotes which
T3503 660-669 VBP denotes determine
T3504 649-659 RB denotes ultimately
T3505 670-680 NN denotes thrombosis
T3506 680-682 , denotes ,
T3507 691-699 NN denotes platelet
T3508 700-711 NN denotes aggregation
T3509 711-713 , denotes ,
T3510 713-724 NN denotes coagulation
T3511 724-726 , denotes ,
T3512 726-729 CC denotes and
T3513 730-742 JJ denotes fibrinolytic
T3514 743-752 NNS denotes functions
T3515 752-753 . denotes .
T3516 753-850 sentence denotes Interactions among these pathways may occur and additional factors may modulate these processes.
T3517 754-766 NNS denotes Interactions
T3518 792-797 VB denotes occur
T3519 767-772 IN denotes among
T3520 773-778 DT denotes these
T3521 779-787 NNS denotes pathways
T3522 788-791 MD denotes may
T3523 798-801 CC denotes and
T3524 802-812 JJ denotes additional
T3525 813-820 NNS denotes factors
T3526 825-833 VB denotes modulate
T3527 821-824 MD denotes may
T3528 834-839 DT denotes these
T3529 840-849 NNS denotes processes
T3530 849-850 . denotes .
T3531 850-1041 sentence denotes Identification of novel modulators and factors of these pathways can be identified by associating the phenotype with a location(s) on a specific chromosome, a quantitative trait locus (QTL).
T3532 851-865 NN denotes Identification
T3533 923-933 VBN denotes identified
T3534 866-868 IN denotes of
T3535 869-874 JJ denotes novel
T3536 875-885 NNS denotes modulators
T3537 886-889 CC denotes and
T3538 890-897 NNS denotes factors
T3539 898-900 IN denotes of
T3540 901-906 DT denotes these
T3541 907-915 NNS denotes pathways
T3542 916-919 MD denotes can
T3543 920-922 VB denotes be
T3544 934-936 IN denotes by
T3545 937-948 VBG denotes associating
T3546 949-952 DT denotes the
T3547 953-962 NN denotes phenotype
T3548 963-967 IN denotes with
T3549 968-969 DT denotes a
T3550 970-978 NN denotes location
T3551 978-979 -LRB- denotes (
T3552 979-980 AFX denotes s
T3553 980-981 -RRB- denotes )
T3554 982-984 IN denotes on
T3555 985-986 DT denotes a
T3556 996-1006 NN denotes chromosome
T3557 987-995 JJ denotes specific
T3558 1006-1008 , denotes ,
T3559 1008-1009 DT denotes a
T3560 1029-1034 NN denotes locus
T3561 1010-1022 JJ denotes quantitative
T3562 1023-1028 NN denotes trait
T3563 1035-1036 -LRB- denotes (
T3564 1036-1039 NN denotes QTL
T3565 1039-1040 -RRB- denotes )
T3566 1040-1041 . denotes .
T3465 466-467 : denotes ;
T3466 468-469 NN denotes A
R671 T3465 T3462 punct ;,10
R672 T3466 T3467 compound A,J
R673 T3467 T3469 nsubj J,susceptible
R674 T3468 T3467 punct /,J
R675 T3469 T3462 amod susceptible,10
R676 T3470 T3462 punct ),10
R677 T3471 T3462 punct [,10
R678 T3472 T3462 punct ],10
R679 T3473 T3402 punct .,have
R680 T3475 T3476 det These,conditions
R681 T3476 T3477 nsubj conditions,are
R682 T3478 T3477 acomp predisposing,are
R683 T3479 T3478 prep to,predisposing
R684 T3480 T3479 pobj thrombosis,to
R685 T3481 T3482 advmod per,se
R686 T3361 T3362 nsubjpass Many,classified
R687 T3482 T3477 advmod se,are
R688 T3483 T3477 punct ", ",are
R689 T3363 T3361 prep of,Many
R690 T3484 T3477 cc but,are
R691 T3364 T3365 det the,strains
R692 T3365 T3363 pobj strains,of
R693 T3366 T3365 amod available,strains
R694 T3485 T3486 det these,mice
R695 T3367 T3368 amod inbred,mouse
R696 T3368 T3365 compound mouse,strains
R697 T3486 T3487 nsubjpass mice,evaluated
R698 T3369 T3365 punct ", ",strains
R699 T3370 T3371 amod such,as
R700 T3371 T3365 prep as,strains
R701 T3487 T3477 conj evaluated,are
R702 T3372 T3373 compound C57BL,6J
R703 T3373 T3371 pobj 6J,as
R704 T3374 T3373 punct /,6J
R705 T3488 T3487 aux have,evaluated
R706 T3375 T3373 punct (,6J
R707 T3376 T3373 appos B6,6J
R708 T3377 T3373 punct ),6J
R709 T3489 T3487 neg not,evaluated
R710 T3378 T3373 cc and,6J
R711 T3379 T3380 compound A,J
R712 T3380 T3373 conj J,6J
R713 T3490 T3487 auxpass been,evaluated
R714 T3381 T3380 punct /,J
R715 T3382 T3362 punct ", ",classified
R716 T3383 T3362 aux have,classified
R717 T3384 T3362 auxpass been,classified
R718 T3385 T3362 prep as,classified
R719 T3386 T3385 amod resistant,as
R720 T3491 T3487 advmod systematically,evaluated
R721 T3387 T3386 cc or,resistant
R722 T3388 T3386 conj susceptible,resistant
R723 T3389 T3388 prep to,susceptible
R724 T3492 T3487 prep for,evaluated
R725 T3390 T3391 amod particular,diseases
R726 T3391 T3389 pobj diseases,to
R727 T3493 T3492 pobj thrombosis,for
R728 T3392 T3391 amod complex,diseases
R729 T3393 T3394 punct (,Table
R730 T3394 T3362 parataxis Table,classified
R731 T3494 T3487 punct .,evaluated
R732 T3395 T3394 nummod 1,Table
R733 T3396 T3394 punct ),Table
R734 T3397 T3362 punct .,classified
R735 T3496 T3497 compound Clot,formation
R736 T3399 T3400 det These,strains
R737 T3400 T3402 nsubj strains,have
R738 T3401 T3400 nummod two,strains
R739 T3497 T3498 nsubj formation,requires
R740 T3403 T3404 amod diverse,responses
R741 T3404 T3402 dobj responses,have
R742 T3405 T3404 prep to,responses
R743 T3499 T3497 cc and,formation
R744 T3406 T3407 npadvmod diet,induced
R745 T3407 T3409 amod induced,obesity
R746 T3408 T3407 punct -,induced
R747 T3409 T3405 pobj obesity,to
R748 T3500 T3497 conj lysis,formation
R749 T3410 T3411 punct [,8
R750 T3411 T3409 parataxis 8,obesity
R751 T3412 T3411 punct ],8
R752 T3501 T3497 punct ", ",formation
R753 T3413 T3414 punct (,resistant
R754 T3414 T3409 parataxis resistant,obesity
R755 T3415 T3416 nsubj B6,susceptible
R756 T3502 T3503 dep which,determine
R757 T3416 T3414 amod susceptible,resistant
R758 T3417 T3414 punct ;,resistant
R759 T3418 T3419 compound A,J
R760 T3503 T3497 relcl determine,formation
R761 T3419 T3414 nsubj J,resistant
R762 T3420 T3419 punct /,J
R763 T3421 T3414 punct ),resistant
R764 T3504 T3503 advmod ultimately,determine
R765 T3422 T3409 punct ", ",obesity
R766 T3423 T3424 npadvmod diet,induced
R767 T3424 T3426 amod induced,atherosclerosis
R768 T3425 T3424 punct -,induced
R769 T3505 T3503 dobj thrombosis,determine
R770 T3506 T3498 punct ", ",requires
R771 T3426 T3409 conj atherosclerosis,obesity
R772 T3427 T3428 punct (,resistant
R773 T3507 T3508 compound platelet,aggregation
R774 T3428 T3426 parataxis resistant,atherosclerosis
R775 T3429 T3430 nsubj B6,susceptible
R776 T3508 T3498 dobj aggregation,requires
R777 T3430 T3428 amod susceptible,resistant
R778 T3431 T3428 punct ;,resistant
R779 T3432 T3433 compound A,J
R780 T3509 T3508 punct ", ",aggregation
R781 T3433 T3428 nsubj J,resistant
R782 T3434 T3433 punct /,J
R783 T3510 T3508 conj coagulation,aggregation
R784 T3435 T3428 punct ),resistant
R785 T3436 T3437 punct [,9
R787 T3437 T3426 parataxis 9,atherosclerosis
R788 T3438 T3437 punct ],9
R789 T3439 T3426 punct ", ",atherosclerosis
R791 T3440 T3441 amod arterial,ligation
R792 T3441 T3442 npadvmod ligation,induced
R793 T3442 T3444 amod induced,hyperplasia
R794 T3443 T3442 punct -,induced
R796 T3444 T3426 conj hyperplasia,atherosclerosis
R797 T3445 T3444 amod neointimal,hyperplasia
R799 T3446 T3447 punct (,resistant
R800 T3447 T3444 parataxis resistant,hyperplasia
R801 T3448 T3449 nsubj B6,resistant
R803 T3449 T3447 amod resistant,resistant
R804 T3450 T3447 punct ;,resistant
R806 T3451 T3452 compound A,J
R807 T3452 T3447 nsubj J,resistant
R808 T3453 T3452 punct /,J
R809 T3454 T3447 punct ),resistant
R810 T3455 T3444 punct ", ",hyperplasia
R812 T3456 T3444 cc and,hyperplasia
R813 T3457 T3458 npadvmod ligation,induced
R814 T3458 T3459 amod induced,remodeling
R815 T3459 T3444 conj remodeling,hyperplasia
R817 T3460 T3459 compound vessel,remodeling
R818 T3461 T3462 punct (,10
R820 T3462 T3459 parataxis 10,remodeling
R821 T3463 T3464 nsubj B6,resistant
R822 T3464 T3462 amod resistant,10
R890 T3543 T3533 auxpass be,identified
R891 T3544 T3533 prep by,identified
R892 T3545 T3544 pcomp associating,by
R893 T3546 T3547 det the,phenotype
R897 T3547 T3545 dobj phenotype,associating
R900 T3548 T3545 prep with,associating
R904 T3549 T3550 det a,location
R908 T3550 T3548 pobj location,with
R910 T3551 T3550 punct (,location
R911 T3552 T3550 nmod s,location
R913 T3553 T3550 punct ),location
R915 T3554 T3550 prep on,location
R919 T3555 T3556 det a,chromosome
R923 T3556 T3554 pobj chromosome,on
R929 T3557 T3556 amod specific,chromosome
R932 T3558 T3550 punct ", ",location
R935 T3559 T3560 det a,locus
R939 T3560 T3550 appos locus,location
R942 T3561 T3560 amod quantitative,locus
R946 T3562 T3560 compound trait,locus
R949 T3563 T3560 punct (,locus
R953 T3564 T3560 appos QTL,locus
R957 T3565 T3533 punct ),identified
R961 T3566 T3533 punct .,identified
R786 T3511 T3510 punct ", ",coagulation
R790 T3512 T3510 cc and,coagulation
R795 T3513 T3514 amod fibrinolytic,functions
R798 T3514 T3510 conj functions,coagulation
R802 T3515 T3498 punct .,requires
R805 T3517 T3518 nsubj Interactions,occur
R811 T3519 T3517 prep among,Interactions
R816 T3520 T3521 det these,pathways
R819 T3521 T3519 pobj pathways,among
R823 T3522 T3518 aux may,occur
R824 T3523 T3518 cc and,occur
R825 T3524 T3525 amod additional,factors
R827 T3525 T3526 nsubj factors,modulate
R830 T3526 T3518 conj modulate,occur
R833 T3527 T3526 aux may,modulate
R836 T3528 T3529 det these,processes
R840 T3529 T3526 dobj processes,modulate
R844 T3530 T3526 punct .,modulate
R848 T3532 T3533 nsubjpass Identification,identified
R853 T3534 T3532 prep of,Identification
R857 T3535 T3536 amod novel,modulators
R862 T3536 T3534 pobj modulators,of
R865 T3537 T3536 cc and,modulators
R870 T3538 T3536 conj factors,modulators
R877 T3539 T3536 prep of,modulators
R880 T3540 T3541 det these,pathways
R882 T3541 T3539 pobj pathways,of
R887 T3542 T3533 aux can,identified

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3067 29-34 NCBITaxon:10088 denotes mouse
T3068 197-206 GO_EXT:reaction_or_response denotes responses
T3069 334-342 UBERON:0001637 denotes arterial
T3070 435-441 UBERON:0000055 denotes vessel
T3071 528-538 GO:0007596 denotes thrombosis
T3072 557-561 NCBITaxon:10088 denotes mice
T3073 605-615 GO:0007596 denotes thrombosis
T3074 617-621 UBERON:0010210 denotes Clot
T3075 617-631 GO:0050817 denotes Clot formation
T3076 670-680 GO:0007596 denotes thrombosis
T3077 691-699 CL:0000233 denotes platelet
T3078 691-711 GO:0070527 denotes platelet aggregation
T3079 713-724 GO:0050817 denotes coagulation
T3080 730-742 GO:0042730 denotes fibrinolytic
T3081 825-833 GO:0065007 denotes modulate
T3082 875-885 GO_EXT:regulator denotes modulators
T3083 970-984 _FRAGMENT denotes location(s) on
T3084 996-1006 GO_SO_EXT:chromosomal_part_or_position_or_region_or_site denotes chromosome
T3085 996-1006 GO_SO_EXT:chromosome denotes chromosome
T3086 1010-1034 SO_EXT:0000771 denotes quantitative trait locus
T3087 1036-1039 SO_EXT:0000771 denotes QTL
R455 T3084 T3083 _lexicallyChainedTo chromosome,location(s) on

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2979 29-34 NCBITaxon:10088 denotes mouse
T2980 334-342 UBERON:0001637 denotes arterial
T2981 435-441 UBERON:0000055 denotes vessel
T2982 528-538 GO:0007596 denotes thrombosis
T2983 557-561 NCBITaxon:10088 denotes mice
T2984 605-615 GO:0007596 denotes thrombosis
T2985 617-621 UBERON:0010210 denotes Clot
T2986 617-631 GO:0050817 denotes Clot formation
T2987 670-680 GO:0007596 denotes thrombosis
T2988 691-699 CL:0000233 denotes platelet
T2989 691-711 GO:0070527 denotes platelet aggregation
T2990 713-724 GO:0050817 denotes coagulation
T2991 730-742 GO:0042730 denotes fibrinolytic
T2992 825-833 GO:0065007 denotes modulate
T2993 1010-1034 SO:0000771 denotes quantitative trait locus
T2994 1036-1039 SO:0000771 denotes QTL

2_test

Id Subject Object Predicate Lexical cue
17022820-7752914-8600374 232-233 7752914 denotes 8
17022820-3841001-8600375 330-331 3841001 denotes 9
17022820-10793085-8600376 486-488 10793085 denotes 10