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Id Subject Object Predicate Lexical cue
T7095 0-9 NN denotes Targeting
T7096 10-12 IN denotes of
T7097 13-16 DT denotes the
T7098 27-31 NN denotes Gene
T7099 17-22 NN denotes Mouse
T7100 23-26 NN denotes Xpd
T7101 31-152 sentence denotes (A) Schematic representation of the genomic structure and partial restriction map of the wt and targeted mouse Xpd loci.
T7102 32-33 -LRB- denotes (
T7103 33-34 LS denotes A
T7104 46-60 NN denotes representation
T7105 34-35 -RRB- denotes )
T7106 36-45 JJ denotes Schematic
T7107 61-63 IN denotes of
T7108 64-67 DT denotes the
T7109 76-85 NN denotes structure
T7110 68-75 JJ denotes genomic
T7111 86-89 CC denotes and
T7112 90-97 JJ denotes partial
T7113 110-113 NN denotes map
T7114 98-109 NN denotes restriction
T7115 114-116 IN denotes of
T7116 117-120 DT denotes the
T7117 147-151 NNS denotes loci
T7118 121-123 NN denotes wt
T7119 124-127 CC denotes and
T7120 128-136 VBN denotes targeted
T7121 137-142 NN denotes mouse
T7122 143-146 NN denotes Xpd
T7123 151-152 . denotes .
T7124 152-277 sentence denotes For the wt Xpd allele, shaded boxes represent coding regions of exons 12 and 19–23; the 3′UTR is represented by an open box.
T7125 153-156 IN denotes For
T7126 250-261 VBN denotes represented
T7127 157-160 DT denotes the
T7128 168-174 NN denotes allele
T7129 161-163 NN denotes wt
T7130 164-167 NN denotes Xpd
T7131 174-176 , denotes ,
T7132 176-182 JJ denotes shaded
T7133 183-188 NNS denotes boxes
T7134 189-198 VBP denotes represent
T7135 199-205 VBG denotes coding
T7136 206-213 NNS denotes regions
T7137 214-216 IN denotes of
T7138 217-222 NNS denotes exons
T7139 223-225 CD denotes 12
T7140 226-229 CC denotes and
T7141 230-232 CD denotes 19
T7142 232-233 SYM denotes –
T7143 233-235 CD denotes 23
T7144 235-236 : denotes ;
T7145 237-240 DT denotes the
T7146 243-246 NN denotes UTR
T7147 241-242 CD denotes 3
T7148 242-243 SYM denotes ′
T7149 247-249 VBZ denotes is
T7150 262-264 IN denotes by
T7151 265-267 DT denotes an
T7152 273-276 NN denotes box
T7153 268-272 JJ denotes open
T7154 276-277 . denotes .
T7155 277-365 sentence denotes TGA indicates the translational stop codon; PolyA indicates the polyadenylation signal.
T7156 278-281 NN denotes TGA
T7157 282-291 VBZ denotes indicates
T7158 328-337 VBZ denotes indicates
T7159 292-295 DT denotes the
T7160 315-320 NN denotes codon
T7161 296-309 JJ denotes translational
T7162 310-314 NN denotes stop
T7163 320-321 : denotes ;
T7164 322-327 NN denotes PolyA
T7165 338-341 DT denotes the
T7166 358-364 NN denotes signal
T7167 342-357 NN denotes polyadenylation
T7168 364-365 . denotes .
T7169 365-557 sentence denotes For the XpdTTD targeted allele, the 194–base pair (bp) human XPD cDNA fragment fused to exon 22 is indicated as a striped box including the TTD (R722W) mutation indicated by a vertical arrow.
T7170 366-369 IN denotes For
T7171 465-474 VBN denotes indicated
T7172 370-373 DT denotes the
T7173 390-396 NN denotes allele
T7174 374-380 NN denotes XpdTTD
T7175 381-389 VBN denotes targeted
T7176 396-398 , denotes ,
T7177 398-401 DT denotes the
T7178 436-444 NN denotes fragment
T7179 402-405 CD denotes 194
T7180 411-415 NN denotes pair
T7181 405-406 HYPH denotes –
T7182 406-410 NN denotes base
T7183 416-417 -LRB- denotes (
T7184 417-419 NN denotes bp
T7185 419-420 -RRB- denotes )
T7186 421-426 JJ denotes human
T7187 427-430 NN denotes XPD
T7188 431-435 NN denotes cDNA
T7189 445-450 VBN denotes fused
T7190 451-453 IN denotes to
T7191 454-458 NN denotes exon
T7192 459-461 CD denotes 22
T7193 462-464 VBZ denotes is
T7194 475-477 IN denotes as
T7195 478-479 DT denotes a
T7196 488-491 NN denotes box
T7197 480-487 VBN denotes striped
T7198 492-501 VBG denotes including
T7199 502-505 DT denotes the
T7200 518-526 NN denotes mutation
T7201 506-509 NN denotes TTD
T7202 510-511 -LRB- denotes (
T7203 511-516 NN denotes R722W
T7204 516-517 -RRB- denotes )
T7205 527-536 VBN denotes indicated
T7206 537-539 IN denotes by
T7207 540-541 DT denotes a
T7208 551-556 NN denotes arrow
T7209 542-550 JJ denotes vertical
T7210 556-557 . denotes .
T7211 557-729 sentence denotes Chicken β-globin exons 2 and 3 including the 3′UTR are indicated as black boxes with corresponding Roman numerals followed by the β-globin polyadenylation signal (PolyA*).
T7212 558-565 NN denotes Chicken
T7213 581-582 CD denotes 2
T7214 566-567 NN denotes β
T7215 568-574 NN denotes globin
T7216 567-568 HYPH denotes -
T7217 575-580 NNS denotes exons
T7218 613-622 VBN denotes indicated
T7219 583-586 CC denotes and
T7220 587-588 CD denotes 3
T7221 589-598 VBG denotes including
T7222 599-602 DT denotes the
T7223 605-608 NN denotes UTR
T7224 603-604 CD denotes 3
T7225 604-605 HYPH denotes ′
T7226 609-612 VBP denotes are
T7227 623-625 IN denotes as
T7228 626-631 JJ denotes black
T7229 632-637 NNS denotes boxes
T7230 638-642 IN denotes with
T7231 643-656 VBG denotes corresponding
T7232 663-671 NNS denotes numerals
T7233 657-662 NNP denotes Roman
T7234 672-680 VBN denotes followed
T7235 681-683 IN denotes by
T7236 684-687 DT denotes the
T7237 713-719 NN denotes signal
T7238 688-689 NN denotes β
T7239 690-696 NN denotes globin
T7240 689-690 HYPH denotes -
T7241 697-712 NN denotes polyadenylation
T7242 720-721 -LRB- denotes (
T7243 721-727 NN denotes PolyA*
T7244 727-728 -RRB- denotes )
T7245 728-729 . denotes .
T7246 729-890 sentence denotes For the Xpd†XP and Xpd†XPCS targeted alleles, vertical arrows indicate XPCS (G602D-encoding) and XP (R683W-encoding) mutations in exons 19 and 22, respectively.
T7247 730-733 IN denotes For
T7248 792-800 VBP denotes indicate
T7249 734-737 DT denotes the
T7250 767-774 NNS denotes alleles
T7251 738-744 NN denotes Xpd†XP
T7252 745-748 CC denotes and
T7253 749-757 NN denotes Xpd†XPCS
T7254 758-766 VBN denotes targeted
T7255 774-776 , denotes ,
T7256 776-784 JJ denotes vertical
T7257 785-791 NNS denotes arrows
T7258 801-805 NN denotes XPCS
T7259 847-856 NNS denotes mutations
T7260 806-807 -LRB- denotes (
T7261 813-821 VBG denotes encoding
T7262 807-812 NN denotes G602D
T7263 812-813 HYPH denotes -
T7264 821-822 -RRB- denotes )
T7265 823-826 CC denotes and
T7266 827-829 NN denotes XP
T7267 830-831 -LRB- denotes (
T7268 837-845 VBG denotes encoding
T7269 831-836 NN denotes R683W
T7270 836-837 HYPH denotes -
T7271 845-846 -RRB- denotes )
T7272 857-859 IN denotes in
T7273 860-865 NNS denotes exons
T7274 866-868 CD denotes 19
T7275 869-872 CC denotes and
T7276 873-875 CD denotes 22
T7277 875-877 , denotes ,
T7278 877-889 RB denotes respectively
T7279 889-890 . denotes .
T7280 890-983 sentence denotes The unique 3′ probe located outside the targeting construct is marked by a thick black line.
T7281 891-894 DT denotes The
T7282 905-910 NN denotes probe
T7283 895-901 JJ denotes unique
T7284 902-903 CD denotes 3
T7285 903-904 SYM denotes ′
T7286 954-960 VBN denotes marked
T7287 911-918 VBN denotes located
T7288 919-926 IN denotes outside
T7289 927-930 DT denotes the
T7290 941-950 NN denotes construct
T7291 931-940 VBG denotes targeting
T7292 951-953 VBZ denotes is
T7293 961-963 IN denotes by
T7294 964-965 DT denotes a
T7295 978-982 NN denotes line
T7296 966-971 JJ denotes thick
T7297 972-977 JJ denotes black
T7298 982-983 . denotes .
T7299 983-1063 sentence denotes Restriction sites: B, BamHI; C, ClaI; E, EcoRI; H, HindIII; Hp, HpaI; Sf, SfiI.
T7300 984-995 NN denotes Restriction
T7301 996-1001 NNS denotes sites
T7302 1001-1003 : denotes :
T7303 1003-1004 NN denotes B
T7304 1004-1006 , denotes ,
T7305 1006-1011 NN denotes BamHI
T7306 1011-1012 : denotes ;
T7307 1013-1014 NN denotes C
T7308 1014-1016 , denotes ,
T7309 1016-1020 NN denotes ClaI
T7310 1020-1021 : denotes ;
T7311 1022-1023 NN denotes E
T7312 1023-1025 , denotes ,
T7313 1025-1030 NN denotes EcoRI
T7314 1030-1031 : denotes ;
T7315 1032-1033 NN denotes H
T7316 1033-1035 , denotes ,
T7317 1035-1042 NN denotes HindIII
T7318 1042-1043 : denotes ;
T7319 1044-1046 NN denotes Hp
T7320 1046-1048 , denotes ,
T7321 1048-1052 NN denotes HpaI
T7322 1052-1053 : denotes ;
T7323 1054-1056 NN denotes Sf
T7324 1056-1058 , denotes ,
T7325 1058-1062 NN denotes SfiI
T7326 1062-1063 . denotes .
T7327 1063-1241 sentence denotes (B) Southern blot analysis of EcoRI-digested genomic DNA from wt, Xpd†XPCS/wt, and Xpd†XP/wt recombinant embryonic stem cell clones hybridised with the 3′ probe depicted in (A).
T7328 1064-1065 -LRB- denotes (
T7329 1065-1066 LS denotes B
T7330 1082-1090 NN denotes analysis
T7331 1066-1067 -RRB- denotes )
T7332 1068-1076 NNP denotes Southern
T7333 1077-1081 NN denotes blot
T7334 1091-1093 IN denotes of
T7335 1094-1099 NN denotes EcoRI
T7336 1100-1108 VBN denotes digested
T7337 1099-1100 HYPH denotes -
T7338 1117-1120 NN denotes DNA
T7339 1109-1116 JJ denotes genomic
T7340 1121-1125 IN denotes from
T7341 1126-1128 NN denotes wt
T7342 1189-1195 NNS denotes clones
T7343 1128-1130 , denotes ,
T7344 1130-1138 NN denotes Xpd†XPCS
T7345 1139-1141 NN denotes wt
T7346 1138-1139 HYPH denotes /
T7347 1141-1143 , denotes ,
T7348 1143-1146 CC denotes and
T7349 1147-1153 NN denotes Xpd†XP
T7350 1154-1156 NN denotes wt
T7351 1153-1154 HYPH denotes /
T7352 1157-1168 JJ denotes recombinant
T7353 1169-1178 JJ denotes embryonic
T7354 1184-1188 NN denotes cell
T7355 1179-1183 NN denotes stem
T7356 1196-1206 VBN denotes hybridised
T7357 1207-1211 IN denotes with
T7358 1212-1215 DT denotes the
T7359 1219-1224 NN denotes probe
T7360 1216-1217 CD denotes 3
T7361 1217-1218 SYM denotes ′
T7362 1225-1233 VBN denotes depicted
T7363 1234-1236 IN denotes in
T7364 1237-1238 -LRB- denotes (
T7365 1238-1239 NN denotes A
T7366 1239-1240 -RRB- denotes )
T7367 1240-1241 . denotes .
T7368 1241-1367 sentence denotes The wt allele yields a 6.5-kilobase (kb) fragment, whereas both targeted Xpd†XP and Xpd†XPCS alleles yield a 5.1-kb fragment.
T7369 1242-1245 DT denotes The
T7370 1249-1255 NN denotes allele
T7371 1246-1248 NN denotes wt
T7372 1256-1262 VBZ denotes yields
T7373 1263-1264 DT denotes a
T7374 1283-1291 NN denotes fragment
T7375 1265-1268 CD denotes 6.5
T7376 1269-1277 NN denotes kilobase
T7377 1268-1269 HYPH denotes -
T7378 1278-1279 -LRB- denotes (
T7379 1279-1281 NN denotes kb
T7380 1281-1282 -RRB- denotes )
T7381 1291-1293 , denotes ,
T7382 1293-1300 IN denotes whereas
T7383 1343-1348 VBP denotes yield
T7384 1301-1305 CC denotes both
T7385 1335-1342 NNS denotes alleles
T7386 1306-1314 VBN denotes targeted
T7387 1315-1321 NN denotes Xpd†XP
T7388 1322-1325 CC denotes and
T7389 1326-1334 NN denotes Xpd†XPCS
T7390 1349-1350 DT denotes a
T7391 1358-1366 NN denotes fragment
T7392 1351-1354 CD denotes 5.1
T7393 1355-1357 NN denotes kb
T7394 1354-1355 HYPH denotes -
T7395 1366-1367 . denotes .
T7396 1367-1518 sentence denotes (C) Genotyping of wt and targeted alleles by PCR using primers F2, R1, and mR as indicated in (A) yields fragments of 399 bp and 468 bp, respectively.
T7397 1368-1369 -LRB- denotes (
T7398 1369-1370 LS denotes C
T7399 1372-1382 NN denotes Genotyping
T7400 1370-1371 -RRB- denotes )
T7401 1383-1385 IN denotes of
T7402 1386-1388 NN denotes wt
T7403 1402-1409 NNS denotes alleles
T7404 1389-1392 CC denotes and
T7405 1393-1401 VBN denotes targeted
T7406 1410-1412 IN denotes by
T7407 1413-1416 NN denotes PCR
T7408 1417-1422 VBG denotes using
T7409 1423-1430 NNS denotes primers
T7410 1431-1433 NN denotes F2
T7411 1433-1435 , denotes ,
T7412 1435-1437 NN denotes R1
T7413 1437-1439 , denotes ,
T7414 1439-1442 CC denotes and
T7415 1443-1445 NN denotes mR
T7416 1446-1448 IN denotes as
T7417 1449-1458 VBN denotes indicated
T7418 1459-1461 IN denotes in
T7419 1462-1463 -LRB- denotes (
T7420 1463-1464 LS denotes A
T7421 1473-1482 NNS denotes fragments
T7422 1464-1465 -RRB- denotes )
T7423 1466-1472 VBZ denotes yields
T7424 1483-1485 IN denotes of
T7425 1486-1489 CD denotes 399
T7426 1490-1492 NN denotes bp
T7427 1493-1496 CC denotes and
T7428 1497-1500 CD denotes 468
T7429 1501-1503 NN denotes bp
T7430 1503-1505 , denotes ,
T7431 1505-1517 RB denotes respectively
T7432 1517-1518 . denotes .
T7433 1518-1762 sentence denotes (D) RT-PCR detection of mRNA expression originating from the targeted †XP and †XPCS alleles in embryonic stem cell clones using primers F1 (hybridising outside the targeting construct) and mR as indicated in (A) results in a 1,416-bp fragment.
T7434 1519-1520 -LRB- denotes (
T7435 1520-1521 LS denotes D
T7436 1731-1738 VBZ denotes results
T7437 1521-1522 -RRB- denotes )
T7438 1523-1525 NN denotes RT
T7439 1526-1529 NN denotes PCR
T7440 1525-1526 HYPH denotes -
T7441 1530-1539 NN denotes detection
T7442 1540-1542 IN denotes of
T7443 1543-1547 NN denotes mRNA
T7444 1548-1558 NN denotes expression
T7445 1559-1570 VBG denotes originating
T7446 1571-1575 IN denotes from
T7447 1576-1579 DT denotes the
T7448 1603-1610 NNS denotes alleles
T7449 1580-1588 VBN denotes targeted
T7450 1589-1592 NN denotes †XP
T7451 1593-1596 CC denotes and
T7452 1597-1602 NN denotes †XPCS
T7453 1611-1613 IN denotes in
T7454 1614-1623 JJ denotes embryonic
T7455 1629-1633 NN denotes cell
T7456 1624-1628 NN denotes stem
T7457 1634-1640 NNS denotes clones
T7458 1641-1646 VBG denotes using
T7459 1647-1654 NNS denotes primers
T7460 1655-1657 NN denotes F1
T7461 1658-1659 -LRB- denotes (
T7462 1659-1670 VBG denotes hybridising
T7463 1671-1678 IN denotes outside
T7464 1679-1682 DT denotes the
T7465 1693-1702 NN denotes construct
T7466 1683-1692 VBG denotes targeting
T7467 1702-1703 -RRB- denotes )
T7468 1704-1707 CC denotes and
T7469 1708-1710 NN denotes mR
T7470 1711-1713 IN denotes as
T7471 1714-1723 VBN denotes indicated
T7472 1724-1726 IN denotes in
T7473 1727-1728 -LRB- denotes (
T7474 1728-1729 NN denotes A
T7475 1729-1730 -RRB- denotes )
T7476 1739-1741 IN denotes in
T7477 1742-1743 DT denotes a
T7478 1753-1761 NN denotes fragment
T7479 1744-1749 CD denotes 1,416
T7480 1750-1752 NN denotes bp
T7481 1749-1750 HYPH denotes -
T7482 1761-1762 . denotes .
T7483 1762-1954 sentence denotes (E) Northern blot analysis of total RNA isolated from testis of homozygous wt and XpdTTD/TTD, heterozygous Xpd†XPCS/wt and XpdTTD/wt, and compound heterozygous Xpd†XPCS/TTD mice as indicated.
T7484 1763-1764 -LRB- denotes (
T7485 1764-1765 LS denotes E
T7486 1781-1789 NN denotes analysis
T7487 1765-1766 -RRB- denotes )
T7488 1767-1775 NNP denotes Northern
T7489 1776-1780 NN denotes blot
T7490 1790-1792 IN denotes of
T7491 1793-1798 JJ denotes total
T7492 1799-1802 NN denotes RNA
T7493 1803-1811 VBN denotes isolated
T7494 1812-1816 IN denotes from
T7495 1817-1823 NN denotes testis
T7496 1824-1826 IN denotes of
T7497 1827-1837 JJ denotes homozygous
T7498 1838-1840 NN denotes wt
T7499 1936-1940 NNS denotes mice
T7500 1841-1844 CC denotes and
T7501 1845-1851 NN denotes XpdTTD
T7502 1852-1855 NN denotes TTD
T7503 1851-1852 HYPH denotes /
T7504 1855-1857 , denotes ,
T7505 1857-1869 JJ denotes heterozygous
T7506 1879-1881 NN denotes wt
T7507 1870-1878 NN denotes Xpd†XPCS
T7508 1878-1879 HYPH denotes /
T7509 1882-1885 CC denotes and
T7510 1886-1892 NN denotes XpdTTD
T7511 1893-1895 NN denotes wt
T7512 1892-1893 HYPH denotes /
T7513 1895-1897 , denotes ,
T7514 1897-1900 CC denotes and
T7515 1901-1909 JJ denotes compound
T7516 1932-1935 NN denotes TTD
T7517 1910-1922 JJ denotes heterozygous
T7518 1923-1931 NN denotes Xpd†XPCS
T7519 1931-1932 HYPH denotes /
T7520 1941-1943 IN denotes as
T7521 1944-1953 VBN denotes indicated
T7522 1953-1954 . denotes .
T7523 1954-2092 sentence denotes Hybridisation with a 1.4-kb mouse Xpd cDNA probe detects mRNAs of 4, 3.3, and 2.7 kb from wt, Xpd†XPCS, and XpdTTD alleles, respectively.
T7524 1955-1968 NN denotes Hybridisation
T7525 2004-2011 VBZ denotes detects
T7526 1969-1973 IN denotes with
T7527 1974-1975 DT denotes a
T7528 1998-2003 NN denotes probe
T7529 1976-1979 CD denotes 1.4
T7530 1980-1982 NN denotes kb
T7531 1979-1980 HYPH denotes -
T7532 1983-1988 NN denotes mouse
T7533 1989-1992 NN denotes Xpd
T7534 1993-1997 NN denotes cDNA
T7535 2012-2017 NNS denotes mRNAs
T7536 2018-2020 IN denotes of
T7537 2021-2022 CD denotes 4
T7538 2037-2039 NN denotes kb
T7539 2022-2024 , denotes ,
T7540 2024-2027 CD denotes 3.3
T7541 2027-2029 , denotes ,
T7542 2029-2032 CC denotes and
T7543 2033-2036 CD denotes 2.7
T7544 2040-2044 IN denotes from
T7545 2045-2047 NN denotes wt
T7546 2070-2077 NNS denotes alleles
T7547 2047-2049 , denotes ,
T7548 2049-2057 NN denotes Xpd†XPCS
T7549 2057-2059 , denotes ,
T7550 2059-2062 CC denotes and
T7551 2063-2069 NN denotes XpdTTD
T7552 2077-2079 , denotes ,
T7553 2079-2091 RB denotes respectively
T7554 2091-2092 . denotes .
T7555 2092-2186 sentence denotes An ethidium bromide (EtBr)–stained gel showing the amount of total RNA loaded is shown below.
T7556 2093-2095 DT denotes An
T7557 2128-2131 NN denotes gel
T7558 2096-2104 NN denotes ethidium
T7559 2105-2112 NN denotes bromide
T7560 2120-2127 VBN denotes stained
T7561 2113-2114 -LRB- denotes (
T7562 2114-2118 NN denotes EtBr
T7563 2118-2119 -RRB- denotes )
T7564 2119-2120 HYPH denotes –
T7565 2174-2179 VBN denotes shown
T7566 2132-2139 VBG denotes showing
T7567 2140-2143 DT denotes the
T7568 2144-2150 NN denotes amount
T7569 2151-2153 IN denotes of
T7570 2154-2159 JJ denotes total
T7571 2160-2163 NN denotes RNA
T7572 2164-2170 VBN denotes loaded
T7573 2171-2173 VBZ denotes is
T7574 2180-2185 RB denotes below
T7575 2185-2186 . denotes .
R4726 T7096 T7095 prep of,Targeting
R4727 T7097 T7098 det the,Gene
R4728 T7098 T7096 pobj Gene,of
R4729 T7099 T7098 compound Mouse,Gene
R4730 T7100 T7098 compound Xpd,Gene
R4731 T7102 T7103 punct (,A
R4732 T7103 T7104 meta A,representation
R4733 T7105 T7103 punct ),A
R4734 T7106 T7104 amod Schematic,representation
R4735 T7107 T7104 prep of,representation
R4736 T7108 T7109 det the,structure
R4737 T7109 T7107 pobj structure,of
R4738 T7110 T7109 amod genomic,structure
R4739 T7111 T7104 cc and,representation
R4740 T7112 T7113 amod partial,map
R4741 T7113 T7104 conj map,representation
R4742 T7114 T7113 compound restriction,map
R4743 T7115 T7113 prep of,map
R4744 T7116 T7117 det the,loci
R4745 T7117 T7115 pobj loci,of
R4746 T7118 T7117 nmod wt,loci
R4747 T7119 T7118 cc and,wt
R4748 T7120 T7118 conj targeted,wt
R4749 T7121 T7117 compound mouse,loci
R4750 T7122 T7117 compound Xpd,loci
R4751 T7123 T7113 punct .,map
R4752 T7125 T7126 prep For,represented
R4753 T7127 T7128 det the,allele
R4754 T7128 T7125 pobj allele,For
R4755 T7129 T7128 compound wt,allele
R4756 T7130 T7128 compound Xpd,allele
R4757 T7131 T7126 punct ", ",represented
R4758 T7132 T7133 amod shaded,boxes
R4759 T7133 T7134 nsubj boxes,represent
R4760 T7134 T7126 ccomp represent,represented
R4761 T7135 T7136 amod coding,regions
R4762 T7136 T7134 dobj regions,represent
R4763 T7137 T7136 prep of,regions
R4764 T7138 T7139 nmod exons,12
R4765 T7139 T7137 pobj 12,of
R4766 T7140 T7139 cc and,12
R4767 T7141 T7139 conj 19,12
R4768 T7142 T7143 punct –,23
R4769 T7143 T7141 prep 23,19
R4770 T7144 T7126 punct ;,represented
R4771 T7145 T7146 det the,UTR
R4772 T7146 T7126 nsubjpass UTR,represented
R4773 T7147 T7146 nummod 3,UTR
R4774 T7148 T7147 punct ′,3
R4775 T7149 T7126 auxpass is,represented
R4776 T7150 T7126 agent by,represented
R4777 T7151 T7152 det an,box
R4778 T7152 T7150 pobj box,by
R4779 T7153 T7152 amod open,box
R4780 T7154 T7126 punct .,represented
R4781 T7156 T7157 nsubj TGA,indicates
R4782 T7157 T7158 ccomp indicates,indicates
R4783 T7159 T7160 det the,codon
R4784 T7160 T7157 dobj codon,indicates
R4785 T7161 T7160 amod translational,codon
R4786 T7162 T7160 compound stop,codon
R4787 T7163 T7158 punct ;,indicates
R4788 T7164 T7158 nsubj PolyA,indicates
R4789 T7165 T7166 det the,signal
R4790 T7166 T7158 dobj signal,indicates
R4791 T7167 T7166 compound polyadenylation,signal
R4792 T7168 T7158 punct .,indicates
R4793 T7170 T7171 prep For,indicated
R4794 T7172 T7173 det the,allele
R4795 T7173 T7170 pobj allele,For
R4796 T7174 T7173 nmod XpdTTD,allele
R4797 T7175 T7173 amod targeted,allele
R4798 T7176 T7171 punct ", ",indicated
R4799 T7177 T7178 det the,fragment
R4800 T7178 T7171 nsubjpass fragment,indicated
R4801 T7179 T7180 nummod 194,pair
R4802 T7180 T7178 nmod pair,fragment
R4803 T7181 T7180 punct –,pair
R4804 T7182 T7180 nmod base,pair
R4805 T7183 T7180 punct (,pair
R4806 T7184 T7180 appos bp,pair
R4807 T7185 T7178 punct ),fragment
R4808 T7186 T7178 amod human,fragment
R4809 T7187 T7178 compound XPD,fragment
R4810 T7188 T7178 compound cDNA,fragment
R4811 T7189 T7178 acl fused,fragment
R4812 T7190 T7189 prep to,fused
R4813 T7191 T7190 pobj exon,to
R4814 T7192 T7191 nummod 22,exon
R4815 T7193 T7171 auxpass is,indicated
R4816 T7194 T7171 prep as,indicated
R4817 T7195 T7196 det a,box
R4818 T7196 T7194 pobj box,as
R4819 T7197 T7196 amod striped,box
R4820 T7198 T7171 prep including,indicated
R4821 T7199 T7200 det the,mutation
R4822 T7200 T7198 pobj mutation,including
R4823 T7201 T7200 nmod TTD,mutation
R4824 T7202 T7203 punct (,R722W
R4825 T7203 T7201 parataxis R722W,TTD
R4826 T7204 T7203 punct ),R722W
R4827 T7205 T7200 acl indicated,mutation
R4828 T7206 T7205 agent by,indicated
R4829 T7207 T7208 det a,arrow
R4830 T7208 T7206 pobj arrow,by
R4831 T7209 T7208 amod vertical,arrow
R4832 T7210 T7171 punct .,indicated
R4833 T7212 T7213 nmod Chicken,2
R4834 T7213 T7218 nsubjpass 2,indicated
R4835 T7214 T7215 nmod β,globin
R4836 T7215 T7213 nmod globin,2
R4837 T7216 T7215 punct -,globin
R4838 T7217 T7213 nmod exons,2
R4839 T7219 T7213 cc and,2
R4840 T7220 T7213 conj 3,2
R4841 T7221 T7213 prep including,2
R4842 T7222 T7223 det the,UTR
R4843 T7223 T7221 pobj UTR,including
R4844 T7224 T7223 nummod 3,UTR
R4845 T7225 T7224 punct ′,3
R4846 T7226 T7218 auxpass are,indicated
R4847 T7227 T7218 prep as,indicated
R4848 T7228 T7229 amod black,boxes
R4849 T7229 T7227 pobj boxes,as
R4850 T7230 T7229 prep with,boxes
R4851 T7231 T7232 amod corresponding,numerals
R4852 T7232 T7230 pobj numerals,with
R4853 T7233 T7232 compound Roman,numerals
R4854 T7234 T7232 acl followed,numerals
R4855 T7235 T7234 agent by,followed
R4856 T7236 T7237 det the,signal
R4857 T7237 T7235 pobj signal,by
R4858 T7238 T7239 compound β,globin
R4859 T7239 T7237 compound globin,signal
R4860 T7240 T7239 punct -,globin
R4861 T7241 T7237 compound polyadenylation,signal
R4862 T7242 T7243 punct (,PolyA*
R4863 T7243 T7237 parataxis PolyA*,signal
R4864 T7244 T7243 punct ),PolyA*
R4865 T7245 T7218 punct .,indicated
R4866 T7247 T7248 prep For,indicate
R4867 T7249 T7250 det the,alleles
R4868 T7250 T7247 pobj alleles,For
R4869 T7251 T7250 nmod Xpd†XP,alleles
R4870 T7252 T7251 cc and,Xpd†XP
R4871 T7253 T7251 conj Xpd†XPCS,Xpd†XP
R4872 T7254 T7250 amod targeted,alleles
R4873 T7255 T7248 punct ", ",indicate
R4874 T7256 T7257 amod vertical,arrows
R4875 T7257 T7248 nsubj arrows,indicate
R4876 T7258 T7259 nmod XPCS,mutations
R4877 T7259 T7248 dobj mutations,indicate
R4878 T7260 T7261 punct (,encoding
R4879 T7261 T7258 parataxis encoding,XPCS
R4880 T7262 T7261 npadvmod G602D,encoding
R4881 T7263 T7261 punct -,encoding
R4882 T7264 T7261 punct ),encoding
R4883 T7265 T7258 cc and,XPCS
R4884 T7266 T7258 conj XP,XPCS
R4885 T7267 T7268 punct (,encoding
R4886 T7268 T7266 parataxis encoding,XP
R4887 T7269 T7268 npadvmod R683W,encoding
R4888 T7270 T7268 punct -,encoding
R4889 T7271 T7268 punct ),encoding
R4890 T7272 T7259 prep in,mutations
R4891 T7273 T7274 nmod exons,19
R4892 T7274 T7272 pobj 19,in
R4893 T7275 T7274 cc and,19
R4894 T7276 T7274 conj 22,19
R4895 T7277 T7248 punct ", ",indicate
R4896 T7278 T7248 advmod respectively,indicate
R4897 T7279 T7248 punct .,indicate
R4898 T7281 T7282 det The,probe
R4899 T7282 T7286 nsubjpass probe,marked
R4900 T7283 T7282 amod unique,probe
R4901 T7284 T7282 nummod 3,probe
R4902 T7285 T7284 punct ′,3
R4903 T7287 T7282 acl located,probe
R4904 T7288 T7287 prep outside,located
R4905 T7289 T7290 det the,construct
R4906 T7290 T7288 pobj construct,outside
R4907 T7291 T7290 amod targeting,construct
R4908 T7292 T7286 auxpass is,marked
R4909 T7293 T7286 agent by,marked
R4910 T7294 T7295 det a,line
R4911 T7295 T7293 pobj line,by
R4912 T7296 T7295 amod thick,line
R4913 T7297 T7295 amod black,line
R4914 T7298 T7286 punct .,marked
R4915 T7300 T7301 compound Restriction,sites
R4916 T7302 T7301 punct : ,sites
R4917 T7303 T7301 appos B,sites
R4918 T7304 T7303 punct ", ",B
R4919 T7305 T7303 appos BamHI,B
R4920 T7306 T7303 punct ;,B
R4921 T7307 T7303 appos C,B
R4922 T7308 T7307 punct ", ",C
R4923 T7309 T7307 appos ClaI,C
R4924 T7310 T7303 punct ;,B
R4925 T7311 T7303 appos E,B
R4926 T7312 T7311 punct ", ",E
R4927 T7313 T7311 appos EcoRI,E
R4928 T7314 T7303 punct ;,B
R4929 T7315 T7303 appos H,B
R4930 T7316 T7315 punct ", ",H
R4931 T7317 T7315 appos HindIII,H
R4932 T7318 T7303 punct ;,B
R4933 T7319 T7303 appos Hp,B
R4934 T7320 T7319 punct ", ",Hp
R4935 T7321 T7319 appos HpaI,Hp
R4936 T7322 T7303 punct ;,B
R4937 T7323 T7303 appos Sf,B
R4938 T7324 T7323 punct ", ",Sf
R4939 T7325 T7323 appos SfiI,Sf
R4940 T7326 T7301 punct .,sites
R4941 T7328 T7329 punct (,B
R4942 T7329 T7330 meta B,analysis
R4943 T7331 T7329 punct ),B
R4944 T7332 T7333 compound Southern,blot
R4945 T7333 T7330 compound blot,analysis
R4946 T7334 T7330 prep of,analysis
R4947 T7335 T7336 npadvmod EcoRI,digested
R4948 T7336 T7338 amod digested,DNA
R4949 T7337 T7336 punct -,digested
R4950 T7338 T7334 pobj DNA,of
R4951 T7339 T7338 amod genomic,DNA
R4952 T7340 T7338 prep from,DNA
R4953 T7341 T7342 nmod wt,clones
R4954 T7342 T7340 pobj clones,from
R4955 T7343 T7341 punct ", ",wt
R4956 T7344 T7345 compound Xpd†XPCS,wt
R4957 T7345 T7341 conj wt,wt
R4958 T7346 T7345 punct /,wt
R4959 T7347 T7345 punct ", ",wt
R4960 T7348 T7345 cc and,wt
R4961 T7349 T7350 compound Xpd†XP,wt
R4962 T7350 T7345 conj wt,wt
R4963 T7351 T7350 punct /,wt
R4964 T7352 T7342 amod recombinant,clones
R4965 T7353 T7354 amod embryonic,cell
R4966 T7354 T7342 compound cell,clones
R4967 T7355 T7354 compound stem,cell
R4968 T7356 T7342 acl hybridised,clones
R4969 T7357 T7356 prep with,hybridised
R4970 T7358 T7359 det the,probe
R4971 T7359 T7357 pobj probe,with
R4972 T7360 T7359 nummod 3,probe
R4973 T7361 T7360 punct ′,3
R4974 T7362 T7359 acl depicted,probe
R4975 T7363 T7362 prep in,depicted
R4976 T7364 T7363 punct (,in
R4977 T7365 T7363 pobj A,in
R4978 T7366 T7330 punct ),analysis
R4979 T7367 T7330 punct .,analysis
R4980 T7369 T7370 det The,allele
R4981 T7370 T7372 nsubj allele,yields
R4982 T7371 T7370 compound wt,allele
R4983 T7373 T7374 det a,fragment
R4984 T7374 T7372 dobj fragment,yields
R4985 T7375 T7376 nummod 6.5,kilobase
R4986 T7376 T7374 nmod kilobase,fragment
R4987 T7377 T7376 punct -,kilobase
R4988 T7378 T7376 punct (,kilobase
R4989 T7379 T7376 appos kb,kilobase
R4990 T7380 T7374 punct ),fragment
R4991 T7381 T7372 punct ", ",yields
R4992 T7382 T7383 mark whereas,yield
R4993 T7383 T7372 advcl yield,yields
R4994 T7384 T7385 preconj both,alleles
R4995 T7385 T7383 nsubj alleles,yield
R4996 T7386 T7385 amod targeted,alleles
R4997 T7387 T7385 nmod Xpd†XP,alleles
R4998 T7388 T7387 cc and,Xpd†XP
R4999 T7389 T7387 conj Xpd†XPCS,Xpd†XP
R5000 T7390 T7391 det a,fragment
R5001 T7391 T7383 dobj fragment,yield
R5002 T7392 T7393 nummod 5.1,kb
R5003 T7393 T7391 compound kb,fragment
R5004 T7394 T7393 punct -,kb
R5005 T7395 T7372 punct .,yields
R5006 T7397 T7398 punct (,C
R5007 T7398 T7399 meta C,Genotyping
R5008 T7400 T7398 punct ),C
R5009 T7401 T7399 prep of,Genotyping
R5010 T7402 T7403 nmod wt,alleles
R5011 T7403 T7401 pobj alleles,of
R5012 T7404 T7402 cc and,wt
R5013 T7405 T7402 conj targeted,wt
R5014 T7406 T7399 prep by,Genotyping
R5015 T7407 T7406 pobj PCR,by
R5016 T7408 T7399 acl using,Genotyping
R5017 T7409 T7408 dobj primers,using
R5018 T7410 T7409 appos F2,primers
R5019 T7411 T7410 punct ", ",F2
R5020 T7412 T7410 conj R1,F2
R5021 T7413 T7412 punct ", ",R1
R5022 T7414 T7412 cc and,R1
R5023 T7415 T7412 conj mR,R1
R5024 T7416 T7417 mark as,indicated
R5025 T7417 T7408 advcl indicated,using
R5026 T7418 T7408 prep in,using
R5027 T7419 T7420 punct (,A
R5028 T7420 T7421 meta A,fragments
R5029 T7421 T7418 pobj fragments,in
R5030 T7422 T7420 punct ),A
R5031 T7423 T7421 nmod yields,fragments
R5032 T7424 T7421 prep of,fragments
R5033 T7425 T7426 nummod 399,bp
R5034 T7426 T7424 pobj bp,of
R5035 T7427 T7426 cc and,bp
R5036 T7428 T7429 nummod 468,bp
R5037 T7429 T7426 conj bp,bp
R5038 T7430 T7408 punct ", ",using
R5039 T7431 T7408 advmod respectively,using
R5040 T7432 T7399 punct .,Genotyping
R5041 T7434 T7435 punct (,D
R5042 T7435 T7436 meta D,results
R5043 T7437 T7435 punct ),D
R5044 T7438 T7439 compound RT,PCR
R5045 T7439 T7441 compound PCR,detection
R5046 T7440 T7439 punct -,PCR
R5047 T7441 T7436 nsubj detection,results
R5048 T7442 T7441 prep of,detection
R5049 T7443 T7444 compound mRNA,expression
R5050 T7444 T7442 pobj expression,of
R5051 T7445 T7444 acl originating,expression
R5052 T7446 T7445 prep from,originating
R5053 T7447 T7448 det the,alleles
R5054 T7448 T7446 pobj alleles,from
R5055 T7449 T7448 amod targeted,alleles
R5056 T7450 T7448 nmod †XP,alleles
R5057 T7451 T7450 cc and,†XP
R5058 T7452 T7450 conj †XPCS,†XP
R5059 T7453 T7441 prep in,detection
R5060 T7454 T7455 amod embryonic,cell
R5061 T7455 T7457 compound cell,clones
R5062 T7456 T7455 compound stem,cell
R5063 T7457 T7453 pobj clones,in
R5064 T7458 T7441 acl using,detection
R5065 T7459 T7458 dobj primers,using
R5066 T7460 T7459 appos F1,primers
R5067 T7461 T7462 punct (,hybridising
R5068 T7462 T7460 parataxis hybridising,F1
R5069 T7463 T7462 prep outside,hybridising
R5070 T7464 T7465 det the,construct
R5071 T7465 T7463 pobj construct,outside
R5072 T7466 T7465 amod targeting,construct
R5073 T7467 T7462 punct ),hybridising
R5074 T7468 T7460 cc and,F1
R5075 T7469 T7460 conj mR,F1
R5076 T7470 T7471 mark as,indicated
R5077 T7471 T7458 advcl indicated,using
R5078 T7472 T7471 prep in,indicated
R5079 T7473 T7472 punct (,in
R5080 T7474 T7472 pobj A,in
R5081 T7475 T7436 punct ),results
R5082 T7476 T7436 prep in,results
R5083 T7477 T7478 det a,fragment
R5084 T7478 T7476 pobj fragment,in
R5085 T7479 T7480 nummod "1,416",bp
R5086 T7480 T7478 compound bp,fragment
R5087 T7481 T7480 punct -,bp
R5088 T7482 T7436 punct .,results
R5089 T7484 T7485 punct (,E
R5090 T7485 T7486 meta E,analysis
R5091 T7487 T7485 punct ),E
R5092 T7488 T7489 compound Northern,blot
R5093 T7489 T7486 compound blot,analysis
R5094 T7490 T7486 prep of,analysis
R5095 T7491 T7492 amod total,RNA
R5096 T7492 T7490 pobj RNA,of
R5097 T7493 T7492 acl isolated,RNA
R5098 T7494 T7493 prep from,isolated
R5099 T7495 T7494 pobj testis,from
R5100 T7496 T7495 prep of,testis
R5101 T7497 T7498 amod homozygous,wt
R5102 T7498 T7499 nmod wt,mice
R5103 T7499 T7496 pobj mice,of
R5104 T7500 T7498 cc and,wt
R5105 T7501 T7502 compound XpdTTD,TTD
R5106 T7502 T7498 conj TTD,wt
R5107 T7503 T7502 punct /,TTD
R5108 T7504 T7498 punct ", ",wt
R5109 T7505 T7506 amod heterozygous,wt
R5110 T7506 T7498 conj wt,wt
R5111 T7507 T7506 compound Xpd†XPCS,wt
R5112 T7508 T7506 punct /,wt
R5113 T7509 T7506 cc and,wt
R5114 T7510 T7511 compound XpdTTD,wt
R5115 T7511 T7506 conj wt,wt
R5116 T7512 T7511 punct /,wt
R5117 T7513 T7506 punct ", ",wt
R5118 T7514 T7506 cc and,wt
R5119 T7515 T7516 amod compound,TTD
R5120 T7516 T7506 conj TTD,wt
R5121 T7517 T7516 amod heterozygous,TTD
R5122 T7518 T7516 compound Xpd†XPCS,TTD
R5123 T7519 T7516 punct /,TTD
R5124 T7520 T7521 mark as,indicated
R5125 T7521 T7493 advcl indicated,isolated
R5126 T7522 T7486 punct .,analysis
R5127 T7524 T7525 nsubj Hybridisation,detects
R5128 T7526 T7524 prep with,Hybridisation
R5129 T7527 T7528 det a,probe
R5130 T7528 T7526 pobj probe,with
R5131 T7529 T7530 nummod 1.4,kb
R5132 T7530 T7528 compound kb,probe
R5133 T7531 T7530 punct -,kb
R5134 T7532 T7528 compound mouse,probe
R5135 T7533 T7528 compound Xpd,probe
R5136 T7534 T7528 compound cDNA,probe
R5137 T7535 T7525 dobj mRNAs,detects
R5138 T7536 T7535 prep of,mRNAs
R5139 T7537 T7538 nummod 4,kb
R5140 T7538 T7536 pobj kb,of
R5141 T7539 T7537 punct ", ",4
R5142 T7540 T7537 conj 3.3,4
R5143 T7541 T7540 punct ", ",3.3
R5144 T7542 T7540 cc and,3.3
R5145 T7543 T7540 conj 2.7,3.3
R5146 T7544 T7535 prep from,mRNAs
R5147 T7545 T7546 nmod wt,alleles
R5148 T7546 T7544 pobj alleles,from
R5149 T7547 T7545 punct ", ",wt
R5150 T7548 T7545 conj Xpd†XPCS,wt
R5151 T7549 T7548 punct ", ",Xpd†XPCS
R5152 T7550 T7548 cc and,Xpd†XPCS
R5153 T7551 T7548 conj XpdTTD,Xpd†XPCS
R5154 T7552 T7535 punct ", ",mRNAs
R5155 T7553 T7535 advmod respectively,mRNAs
R5156 T7554 T7525 punct .,detects
R5157 T7556 T7557 det An,gel
R5158 T7557 T7565 nsubjpass gel,shown
R5159 T7558 T7559 compound ethidium,bromide
R5160 T7559 T7560 npadvmod bromide,stained
R5161 T7560 T7557 amod stained,gel
R5162 T7561 T7559 punct (,bromide
R5163 T7562 T7559 appos EtBr,bromide
R5164 T7563 T7560 punct ),stained
R5165 T7564 T7560 punct –,stained
R5166 T7566 T7557 acl showing,gel
R5167 T7567 T7568 det the,amount
R5168 T7568 T7566 dobj amount,showing
R5169 T7569 T7568 prep of,amount
R5170 T7570 T7571 amod total,RNA
R5171 T7571 T7569 pobj RNA,of
R5172 T7572 T7571 acl loaded,RNA
R5173 T7573 T7565 auxpass is,shown
R5174 T7574 T7565 advmod below,shown
R5175 T7575 T7565 punct .,shown

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6945 1109-1116 SO:0001026 denotes genomic
T6903 17-22 NCBITaxon:10088 denotes Mouse
T6904 23-26 PR:000007164 denotes Xpd
T6905 27-31 SO:0000704 denotes Gene
T6906 68-75 SO:0001026 denotes genomic
T6907 98-113 SO:0001250 denotes restriction map
T6908 137-142 NCBITaxon:10088 denotes mouse
T6909 143-146 PR:000007164 denotes Xpd
T6910 164-167 PR:000007164 denotes Xpd
T6911 168-174 SO:0001023 denotes allele
T6912 199-222 SO:0001215 denotes coding regions of exons
T6913 241-246 SO:0000205 denotes 3′UTR
T6914 296-314 GO:0006415 denotes translational stop
T6915 296-320 SO:0000319 denotes translational stop codon
T6916 322-327 SO:0000551 denotes PolyA
T6917 342-357 GO:0043631 denotes polyadenylation
T6918 342-364 SO:0000551 denotes polyadenylation signal
T6919 374-377 PR:000007164 denotes Xpd
T6920 390-396 SO:0001023 denotes allele
T6921 406-415 SO:0000028 denotes base pair
T6922 417-419 SO:0000028 denotes bp
T6923 421-426 NCBITaxon:9606 denotes human
T6924 427-430 PR:000007164 denotes XPD
T6925 454-458 SO:0000147 denotes exon
T6926 558-565 NCBITaxon:9031 denotes Chicken
T6927 566-574 PR:000008457 denotes β-globin
T6928 568-574 CHEBI:5386 denotes globin
T6929 575-580 SO:0000147 denotes exons
T6930 603-608 SO:0000205 denotes 3′UTR
T6931 688-696 PR:000008457 denotes β-globin
T6932 690-696 CHEBI:5386 denotes globin
T6933 697-712 GO:0043631 denotes polyadenylation
T6934 697-719 SO:0000551 denotes polyadenylation signal
T6935 721-727 SO:0000551 denotes PolyA*
T6936 738-741 PR:000007164 denotes Xpd
T6937 749-752 PR:000007164 denotes Xpd
T6938 767-774 SO:0001023 denotes alleles
T6939 860-865 SO:0000147 denotes exons
T6940 984-1001 SO:0000061 denotes Restriction sites
T6941 1003-1004 PR:P23940 denotes B
T6942 1006-1011 PR:P23940 denotes BamHI
T6943 1032-1033 PR:P43870 denotes H
T6944 1035-1042 PR:P43870 denotes HindIII
T6946 1130-1133 PR:000007164 denotes Xpd
T6947 1147-1150 PR:000007164 denotes Xpd
T6948 1169-1178 UBERON:0000922 denotes embryonic
T6949 1169-1188 CL:0002322 denotes embryonic stem cell
T6950 1196-1206 GO:0097617 denotes hybridised
T6951 1249-1255 SO:0001023 denotes allele
T6952 1315-1318 PR:000007164 denotes Xpd
T6953 1326-1329 PR:000007164 denotes Xpd
T6954 1335-1342 SO:0001023 denotes alleles
T6955 1402-1409 SO:0001023 denotes alleles
T6956 1423-1430 SO:0000112 denotes primers
T6957 1490-1492 SO:0000028 denotes bp
T6958 1501-1503 SO:0000028 denotes bp
T6959 1548-1558 GO:0010467 denotes expression
T6960 1603-1610 SO:0001023 denotes alleles
T6961 1614-1623 UBERON:0000922 denotes embryonic
T6962 1614-1633 CL:0002322 denotes embryonic stem cell
T6963 1647-1654 SO:0000112 denotes primers
T6964 1659-1670 GO:0097617 denotes hybridising
T6965 1750-1752 SO:0000028 denotes bp
T6966 1817-1823 UBERON:0000473 denotes testis
T6967 1845-1848 PR:000007164 denotes Xpd
T6968 1870-1873 PR:000007164 denotes Xpd
T6969 1923-1926 PR:000007164 denotes Xpd
T6970 1936-1940 NCBITaxon:10088 denotes mice
T6971 1955-1968 GO:0097617 denotes Hybridisation
T6972 1983-1988 NCBITaxon:10088 denotes mouse
T6973 1989-1992 PR:000007164 denotes Xpd
T6974 2049-2052 PR:000007164 denotes Xpd
T6975 2063-2066 PR:000007164 denotes Xpd
T6976 2070-2077 SO:0001023 denotes alleles
T6977 2096-2112 CHEBI:4883 denotes ethidium bromide
T6978 2114-2118 CHEBI:4883 denotes EtBr

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T6979 17-22 NCBITaxon:10088 denotes Mouse
T6980 23-26 PR_EXT:000007164 denotes Xpd
T6981 27-31 SO_EXT:0000704 denotes Gene
T6982 68-75 SO_EXT:0001026 denotes genomic
T6983 98-113 SO_EXT:0001250 denotes restriction map
T6984 121-123 SO_EXT:wild_type_entity_or_quality denotes wt
T6985 137-142 NCBITaxon:10088 denotes mouse
T6986 143-146 PR_EXT:000007164 denotes Xpd
T6987 161-163 SO_EXT:wild_type_entity_or_quality denotes wt
T6988 164-167 PR_EXT:000007164 denotes Xpd
T6989 168-174 SO_EXT:0001023 denotes allele
T6990 199-222 SO_EXT:0001215 denotes coding regions of exons
T6991 241-246 SO_EXT:0000205 denotes 3′UTR
T6992 296-314 GO:0006415 denotes translational stop
T6993 296-320 SO_EXT:0000319 denotes translational stop codon
T6994 322-327 SO_EXT:0000551 denotes PolyA
T6995 342-357 GO:0043631 denotes polyadenylation
T6996 342-364 SO_EXT:0000551 denotes polyadenylation signal
T6997 374-377 PR_EXT:000007164 denotes Xpd
T6998 390-396 SO_EXT:0001023 denotes allele
T6999 406-410 CHEBI_SO_EXT:base denotes base
T7000 406-415 SO_EXT:0000028 denotes base pair
T7001 417-419 SO_EXT:0000028 denotes bp
T7002 421-426 NCBITaxon:9606 denotes human
T7003 427-430 PR_EXT:000007164 denotes XPD
T7004 431-435 SO_EXT:cDNA denotes cDNA
T7005 445-450 SO_EXT:sequence_fusion_process denotes fused
T7006 454-458 SO_EXT:0000147 denotes exon
T7007 518-526 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T7008 558-565 NCBITaxon:9031 denotes Chicken
T7009 566-574 PR_EXT:000008457 denotes β-globin
T7010 568-574 CHEBI:5386 denotes globin
T7011 575-580 SO_EXT:0000147 denotes exons
T7012 603-608 SO_EXT:0000205 denotes 3′UTR
T7013 688-696 PR_EXT:000008457 denotes β-globin
T7014 690-696 CHEBI:5386 denotes globin
T7015 697-712 GO:0043631 denotes polyadenylation
T7016 697-719 SO_EXT:0000551 denotes polyadenylation signal
T7017 721-727 SO_EXT:0000551 denotes PolyA*
T7018 738-741 PR_EXT:000007164 denotes Xpd
T7019 749-752 PR_EXT:000007164 denotes Xpd
T7020 767-774 SO_EXT:0001023 denotes alleles
T7021 813-821 SO_EXT:sequence_coding_function denotes encoding
T7022 837-845 SO_EXT:sequence_coding_function denotes encoding
T7023 847-856 SO_EXT:sequence_alteration_entity_or_process denotes mutations
T7024 860-865 SO_EXT:0000147 denotes exons
T7025 905-910 CHEBI_SO_EXT:molecular_probe denotes probe
T7026 941-950 SO_EXT:engineered_biological_sequence denotes construct
T7027 984-1001 SO_EXT:0000061 denotes Restriction sites
T7028 1003-1004 PR_EXT:P23940 denotes B
T7029 1006-1011 PR_EXT:P23940 denotes BamHI
T7030 1032-1033 PR_EXT:P43870 denotes H
T7031 1035-1042 PR_EXT:P43870 denotes HindIII
T7032 1109-1120 SO_EXT:genomic_DNA denotes genomic DNA
T7033 1117-1120 CHEBI_SO_EXT:DNA denotes DNA
T7034 1126-1128 SO_EXT:wild_type_entity_or_quality denotes wt
T7035 1130-1133 PR_EXT:000007164 denotes Xpd
T7036 1139-1141 SO_EXT:wild_type_entity_or_quality denotes wt
T7037 1147-1150 PR_EXT:000007164 denotes Xpd
T7038 1154-1156 SO_EXT:wild_type_entity_or_quality denotes wt
T7039 1157-1168 GO_SO_EXT:sequence_rearrangement_process denotes recombinant
T7040 1169-1178 UBERON:0000922 denotes embryonic
T7041 1169-1188 CL:0002322 denotes embryonic stem cell
T7042 1184-1188 CL_GO_EXT:cell denotes cell
T7043 1189-1195 SO_EXT:sequence_cloned_entity denotes clones
T7044 1196-1206 GO:0097617 denotes hybridised
T7045 1219-1224 CHEBI_SO_EXT:molecular_probe denotes probe
T7046 1246-1248 SO_EXT:wild_type_entity_or_quality denotes wt
T7047 1249-1255 SO_EXT:0001023 denotes allele
T7048 1273-1277 CHEBI_SO_EXT:base denotes base
T7049 1280-1281 CHEBI_SO_EXT:base denotes b
T7050 1315-1318 PR_EXT:000007164 denotes Xpd
T7051 1326-1329 PR_EXT:000007164 denotes Xpd
T7052 1335-1342 SO_EXT:0001023 denotes alleles
T7053 1356-1357 CHEBI_SO_EXT:base denotes b
T7054 1386-1388 SO_EXT:wild_type_entity_or_quality denotes wt
T7055 1402-1409 SO_EXT:0001023 denotes alleles
T7056 1423-1430 SO_EXT:0000112 denotes primers
T7057 1490-1492 SO_EXT:0000028 denotes bp
T7058 1501-1503 SO_EXT:0000028 denotes bp
T7059 1523-1525 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T7060 1543-1547 CHEBI_SO_EXT:mRNA denotes mRNA
T7061 1548-1558 GO:0010467 denotes expression
T7062 1603-1610 SO_EXT:0001023 denotes alleles
T7063 1614-1623 UBERON:0000922 denotes embryonic
T7064 1614-1633 CL:0002322 denotes embryonic stem cell
T7065 1629-1633 CL_GO_EXT:cell denotes cell
T7066 1634-1640 SO_EXT:sequence_cloned_entity denotes clones
T7067 1647-1654 SO_EXT:0000112 denotes primers
T7068 1659-1670 GO:0097617 denotes hybridising
T7069 1693-1702 SO_EXT:engineered_biological_sequence denotes construct
T7070 1750-1752 SO_EXT:0000028 denotes bp
T7071 1799-1802 CHEBI_SO_EXT:RNA denotes RNA
T7072 1817-1823 UBERON:0000473 denotes testis
T7073 1838-1840 SO_EXT:wild_type_entity_or_quality denotes wt
T7074 1845-1848 PR_EXT:000007164 denotes Xpd
T7075 1870-1873 PR_EXT:000007164 denotes Xpd
T7076 1879-1881 SO_EXT:wild_type_entity_or_quality denotes wt
T7077 1893-1895 SO_EXT:wild_type_entity_or_quality denotes wt
T7078 1923-1926 PR_EXT:000007164 denotes Xpd
T7079 1936-1940 NCBITaxon:10088 denotes mice
T7080 1955-1968 GO:0097617 denotes Hybridisation
T7081 1981-1982 CHEBI_SO_EXT:base denotes b
T7082 1983-1988 NCBITaxon:10088 denotes mouse
T7083 1989-1992 PR_EXT:000007164 denotes Xpd
T7084 1993-1997 SO_EXT:cDNA denotes cDNA
T7085 1998-2003 CHEBI_SO_EXT:molecular_probe denotes probe
T7086 2012-2017 CHEBI_SO_EXT:mRNA denotes mRNAs
T7087 2038-2039 CHEBI_SO_EXT:base denotes b
T7088 2045-2047 SO_EXT:wild_type_entity_or_quality denotes wt
T7089 2049-2052 PR_EXT:000007164 denotes Xpd
T7090 2063-2066 PR_EXT:000007164 denotes Xpd
T7091 2070-2077 SO_EXT:0001023 denotes alleles
T7092 2096-2112 CHEBI:4883 denotes ethidium bromide
T7093 2114-2118 CHEBI:4883 denotes EtBr
T7094 2160-2163 CHEBI_SO_EXT:RNA denotes RNA