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PMC:1584416 / 2081-3741 JSONTXT

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Id Subject Object Predicate Lexical cue
T590 103-113 VBN denotes considered
T595 1-6 JJR denotes lower
T596 7-16 NNS denotes organisms
T597 17-18 -LRB- denotes [
T598 18-19 CD denotes 1
T599 19-20 -RRB- denotes ]
T600 20-22 , denotes ,
T601 22-25 PRP$ denotes its
T602 26-35 NN denotes potential
T603 36-38 TO denotes to
T604 39-49 VB denotes contribute
T605 50-52 IN denotes to
T606 53-61 JJ denotes clinical
T607 62-75 NN denotes heterogeneity
T608 76-78 IN denotes in
T609 79-84 JJ denotes human
T610 85-92 NN denotes disease
T611 93-95 VBZ denotes is
T612 96-102 RB denotes seldom
T613 113-114 . denotes .
T614 114-442 sentence denotes Evidence of interallelic complementation at clinically relevant loci is limited to biochemical and cell-based studies of a handful of metabolic disorders with defects in enzymes including propinyl-CoA carboxylase [2], argininosuccinate lyase [3], galactose-1-phosphate uridylyltransferase [4], and methylmalonyl CoA mutase [5].
T615 115-123 NN denotes Evidence
T616 187-194 VBN denotes limited
T617 124-126 IN denotes of
T618 127-139 JJ denotes interallelic
T619 140-155 NN denotes complementation
T620 156-158 IN denotes at
T621 159-169 RB denotes clinically
T622 170-178 JJ denotes relevant
T623 179-183 NNS denotes loci
T624 184-186 VBZ denotes is
T625 195-197 IN denotes to
T626 198-209 JJ denotes biochemical
T627 225-232 NNS denotes studies
T628 210-213 CC denotes and
T629 214-218 NN denotes cell
T630 219-224 VBN denotes based
T631 218-219 HYPH denotes -
T632 233-235 IN denotes of
T633 236-237 DT denotes a
T634 238-245 NN denotes handful
T635 246-248 IN denotes of
T636 249-258 JJ denotes metabolic
T637 259-268 NNS denotes disorders
T638 269-273 IN denotes with
T639 274-281 NNS denotes defects
T640 282-284 IN denotes in
T641 285-292 NNS denotes enzymes
T642 293-302 VBG denotes including
T643 303-311 NN denotes propinyl
T644 312-315 NN denotes CoA
T645 311-312 HYPH denotes -
T646 316-327 NN denotes carboxylase
T647 328-329 -LRB- denotes [
T648 329-330 CD denotes 2
T649 330-331 -RRB- denotes ]
T650 331-333 , denotes ,
T651 333-350 NN denotes argininosuccinate
T652 351-356 NN denotes lyase
T653 357-358 -LRB- denotes [
T654 358-359 CD denotes 3
T655 359-360 -RRB- denotes ]
T656 360-362 , denotes ,
T657 362-371 NN denotes galactose
T658 374-383 NN denotes phosphate
T659 371-372 HYPH denotes -
T660 372-373 CD denotes 1
T661 373-374 HYPH denotes -
T662 384-403 NN denotes uridylyltransferase
T663 404-405 -LRB- denotes [
T664 405-406 CD denotes 4
T665 406-407 -RRB- denotes ]
T666 407-409 , denotes ,
T667 409-412 CC denotes and
T668 413-426 NN denotes methylmalonyl
T669 431-437 NN denotes mutase
T670 427-430 NN denotes CoA
T671 438-439 -LRB- denotes [
T672 439-440 CD denotes 5
T673 440-441 -RRB- denotes ]
T674 441-442 . denotes .
T675 442-537 sentence denotes Compound heterozygotes are individuals carrying two different mutant alleles of the same gene.
T676 443-451 JJ denotes Compound
T677 452-465 NNS denotes heterozygotes
T678 466-469 VBP denotes are
T679 470-481 NNS denotes individuals
T680 482-490 VBG denotes carrying
T681 491-494 CD denotes two
T682 512-519 NNS denotes alleles
T683 495-504 JJ denotes different
T684 505-511 JJ denotes mutant
T685 520-522 IN denotes of
T686 523-526 DT denotes the
T687 532-536 NN denotes gene
T688 527-531 JJ denotes same
T689 536-537 . denotes .
T690 537-766 sentence denotes In the absence of a dominant (wild-type [wt]) allele, genetic interactions between recessive alleles (referred to here as “biallelic” effects) could result in different phenotypic outcomes including interallelic complementation.
T691 538-540 IN denotes In
T692 687-693 VB denotes result
T693 541-544 DT denotes the
T694 545-552 NN denotes absence
T695 553-555 IN denotes of
T696 556-557 DT denotes a
T697 584-590 NN denotes allele
T698 558-566 JJ denotes dominant
T699 567-568 -LRB- denotes (
T700 568-572 JJ denotes wild
T701 573-577 NN denotes type
T702 572-573 HYPH denotes -
T703 578-579 -LRB- denotes [
T704 579-581 NN denotes wt
T705 581-582 -RRB- denotes ]
T706 582-583 -RRB- denotes )
T707 590-592 , denotes ,
T708 592-599 JJ denotes genetic
T709 600-612 NNS denotes interactions
T710 613-620 IN denotes between
T711 621-630 JJ denotes recessive
T712 631-638 NNS denotes alleles
T713 639-640 -LRB- denotes (
T714 640-648 VBN denotes referred
T715 649-651 IN denotes to
T716 652-656 RB denotes here
T717 657-659 IN denotes as
T718 660-661 `` denotes “
T719 661-670 JJ denotes biallelic
T720 672-679 NNS denotes effects
T721 670-671 '' denotes ”
T722 679-680 -RRB- denotes )
T723 681-686 MD denotes could
T724 694-696 IN denotes in
T725 697-706 JJ denotes different
T726 718-726 NNS denotes outcomes
T727 707-717 JJ denotes phenotypic
T728 727-736 VBG denotes including
T729 737-749 JJ denotes interallelic
T730 750-765 NN denotes complementation
T731 765-766 . denotes .
T732 766-1102 sentence denotes Although amelioration of disease symptoms by interallelic complementation would create an ascertainment bias in the clinic, the lack of evidence concerning interallelic complementation or other biallelic effects in human disease is likely caused by the difficulty in distinguishing such effects from environment and genetic background.
T733 767-775 IN denotes Although
T734 847-853 VB denotes create
T735 776-788 NN denotes amelioration
T736 789-791 IN denotes of
T737 792-799 NN denotes disease
T738 800-808 NNS denotes symptoms
T739 809-811 IN denotes by
T740 812-824 JJ denotes interallelic
T741 825-840 NN denotes complementation
T742 841-846 MD denotes would
T743 1006-1012 VBN denotes caused
T744 854-856 DT denotes an
T745 871-875 NN denotes bias
T746 857-870 NN denotes ascertainment
T747 876-878 IN denotes in
T748 879-882 DT denotes the
T749 883-889 NN denotes clinic
T750 889-891 , denotes ,
T751 891-894 DT denotes the
T752 895-899 NN denotes lack
T753 900-902 IN denotes of
T754 903-911 NN denotes evidence
T755 912-922 VBG denotes concerning
T756 923-935 JJ denotes interallelic
T757 936-951 NN denotes complementation
T758 952-954 CC denotes or
T759 955-960 JJ denotes other
T760 971-978 NNS denotes effects
T761 961-970 JJ denotes biallelic
T762 979-981 IN denotes in
T763 982-987 JJ denotes human
T764 988-995 NN denotes disease
T765 996-998 VBZ denotes is
T766 999-1005 RB denotes likely
T767 1013-1015 IN denotes by
T768 1016-1019 DT denotes the
T769 1020-1030 NN denotes difficulty
T770 1031-1033 IN denotes in
T771 1034-1048 VBG denotes distinguishing
T772 1049-1053 JJ denotes such
T773 1054-1061 NNS denotes effects
T774 1062-1066 IN denotes from
T775 1067-1078 NN denotes environment
T776 1079-1082 CC denotes and
T777 1083-1090 JJ denotes genetic
T778 1091-1101 NN denotes background
T779 1101-1102 . denotes .
T780 1102-1403 sentence denotes XPD encodes one of the two helicase components of basal transcription/DNA repair factor IIH (TFIIH), a ten-subunit, multifunctional complex that is essential for multiple processes, including basal transcription initiation and DNA damage repair via the nucleotide excision repair (NER) pathway [6,7].
T781 1103-1106 NN denotes XPD
T782 1107-1114 VBZ denotes encodes
T783 1115-1118 CD denotes one
T784 1119-1121 IN denotes of
T785 1122-1125 DT denotes the
T786 1139-1149 NNS denotes components
T787 1126-1129 CD denotes two
T788 1130-1138 NN denotes helicase
T789 1150-1152 IN denotes of
T790 1153-1158 JJ denotes basal
T791 1191-1194 NN denotes IIH
T792 1159-1172 NN denotes transcription
T793 1172-1173 HYPH denotes /
T794 1173-1176 NN denotes DNA
T795 1177-1183 NN denotes repair
T796 1184-1190 NN denotes factor
T797 1195-1196 -LRB- denotes (
T798 1196-1201 NN denotes TFIIH
T799 1201-1202 -RRB- denotes )
T800 1202-1204 , denotes ,
T801 1204-1205 DT denotes a
T802 1235-1242 NN denotes complex
T803 1206-1209 CD denotes ten
T804 1210-1217 NN denotes subunit
T805 1209-1210 HYPH denotes -
T806 1217-1219 , denotes ,
T807 1219-1234 JJ denotes multifunctional
T808 1243-1247 WDT denotes that
T809 1248-1250 VBZ denotes is
T810 1251-1260 JJ denotes essential
T811 1261-1264 IN denotes for
T812 1265-1273 JJ denotes multiple
T813 1274-1283 NNS denotes processes
T814 1283-1285 , denotes ,
T815 1285-1294 VBG denotes including
T816 1295-1300 JJ denotes basal
T817 1315-1325 NN denotes initiation
T818 1301-1314 NN denotes transcription
T819 1326-1329 CC denotes and
T820 1330-1333 NN denotes DNA
T821 1341-1347 NN denotes repair
T822 1334-1340 NN denotes damage
T823 1348-1351 IN denotes via
T824 1352-1355 DT denotes the
T825 1389-1396 NN denotes pathway
T826 1356-1366 NN denotes nucleotide
T827 1376-1382 NN denotes repair
T828 1367-1375 NN denotes excision
T829 1383-1384 -LRB- denotes (
T830 1384-1387 NN denotes NER
T831 1387-1388 -RRB- denotes )
T832 1397-1398 -LRB- denotes [
T833 1400-1401 CD denotes 7
T834 1398-1399 CD denotes 6
T835 1399-1400 , denotes ,
T836 1401-1402 -RRB- denotes ]
T837 1402-1403 . denotes .
T838 1403-1633 sentence denotes Alterations in XPD resulting in defective TFIIH function are associated with UV-sensitive, multisystem disorders including xeroderma pigmentosum (XP), XP combined with Cockayne syndrome (CS), and trichothiodystrophy (TTD) [8–10].
T839 1404-1415 NNS denotes Alterations
T840 1465-1475 VBN denotes associated
T841 1416-1418 IN denotes in
T842 1419-1422 NN denotes XPD
T843 1423-1432 VBG denotes resulting
T844 1433-1435 IN denotes in
T845 1436-1445 JJ denotes defective
T846 1452-1460 NN denotes function
T847 1446-1451 NN denotes TFIIH
T848 1461-1464 VBP denotes are
T849 1476-1480 IN denotes with
T850 1481-1483 NN denotes UV
T851 1484-1493 JJ denotes sensitive
T852 1483-1484 HYPH denotes -
T853 1507-1516 NNS denotes disorders
T854 1493-1495 , denotes ,
T855 1495-1506 JJ denotes multisystem
T856 1517-1526 VBG denotes including
T857 1527-1536 NN denotes xeroderma
T858 1537-1548 NN denotes pigmentosum
T859 1549-1550 -LRB- denotes (
T860 1550-1552 NN denotes XP
T861 1552-1553 -RRB- denotes )
T862 1553-1555 , denotes ,
T863 1555-1557 NN denotes XP
T864 1558-1566 VBN denotes combined
T865 1567-1571 IN denotes with
T866 1572-1580 NN denotes Cockayne
T867 1581-1589 NN denotes syndrome
T868 1590-1591 -LRB- denotes (
T869 1591-1593 NN denotes CS
T870 1593-1594 -RRB- denotes )
T871 1594-1596 , denotes ,
T872 1596-1599 CC denotes and
T873 1600-1619 NN denotes trichothiodystrophy
T874 1620-1621 -LRB- denotes (
T875 1621-1624 NN denotes TTD
T876 1624-1625 -RRB- denotes )
T877 1626-1627 -LRB- denotes [
T878 1627-1628 CD denotes 8
T879 1628-1629 SYM denotes –
T880 1629-1631 CD denotes 10
T881 1631-1632 -RRB- denotes ]
T882 1632-1633 . denotes .
T884 1634-1636 NN denotes XP
T885 1640-1646 VBN denotes marked
T886 1637-1639 VBZ denotes is
T887 1647-1649 IN denotes by
T888 1650-1653 NN denotes sun
T890 1653-1654 HYPH denotes -
R273 T595 T596 amod lower,organisms
R275 T597 T598 punct [,1
R276 T598 T596 parataxis 1,organisms
R277 T599 T598 punct ],1
R278 T600 T590 punct ", ",considered
R279 T601 T602 poss its,potential
R280 T602 T590 nsubjpass potential,considered
R281 T603 T604 aux to,contribute
R282 T604 T602 acl contribute,potential
R283 T605 T604 prep to,contribute
R284 T606 T607 amod clinical,heterogeneity
R285 T607 T605 pobj heterogeneity,to
R286 T608 T607 prep in,heterogeneity
R287 T609 T610 amod human,disease
R288 T610 T608 pobj disease,in
R289 T611 T590 auxpass is,considered
R290 T612 T590 advmod seldom,considered
R291 T613 T590 punct .,considered
R292 T615 T616 nsubjpass Evidence,limited
R293 T617 T615 prep of,Evidence
R294 T618 T619 amod interallelic,complementation
R295 T619 T617 pobj complementation,of
R296 T620 T619 prep at,complementation
R297 T621 T622 advmod clinically,relevant
R298 T622 T623 amod relevant,loci
R299 T623 T620 pobj loci,at
R300 T624 T616 auxpass is,limited
R301 T625 T616 prep to,limited
R302 T626 T627 amod biochemical,studies
R303 T627 T625 pobj studies,to
R304 T628 T626 cc and,biochemical
R305 T629 T630 npadvmod cell,based
R306 T630 T626 conj based,biochemical
R307 T631 T630 punct -,based
R308 T632 T627 prep of,studies
R309 T633 T634 det a,handful
R310 T634 T632 pobj handful,of
R311 T635 T634 prep of,handful
R312 T636 T637 amod metabolic,disorders
R313 T637 T635 pobj disorders,of
R314 T638 T637 prep with,disorders
R315 T639 T638 pobj defects,with
R316 T640 T639 prep in,defects
R317 T641 T640 pobj enzymes,in
R318 T642 T641 prep including,enzymes
R319 T643 T644 compound propinyl,CoA
R321 T645 T644 punct -,CoA
R322 T646 T642 pobj carboxylase,including
R323 T647 T648 punct [,2
R324 T648 T646 parataxis 2,carboxylase
R325 T649 T648 punct ],2
R326 T650 T646 punct ", ",carboxylase
R327 T651 T652 compound argininosuccinate,lyase
R328 T652 T646 conj lyase,carboxylase
R329 T653 T654 punct [,3
R330 T654 T652 parataxis 3,lyase
R331 T655 T654 punct ],3
R332 T656 T652 punct ", ",lyase
R333 T657 T658 nmod galactose,phosphate
R334 T658 T662 compound phosphate,uridylyltransferase
R335 T659 T658 punct -,phosphate
R336 T660 T658 nummod 1,phosphate
R337 T661 T658 punct -,phosphate
R338 T662 T652 conj uridylyltransferase,lyase
R339 T663 T664 punct [,4
R340 T664 T662 parataxis 4,uridylyltransferase
R341 T665 T664 punct ],4
R342 T666 T662 punct ", ",uridylyltransferase
R343 T667 T662 cc and,uridylyltransferase
R344 T668 T669 compound methylmalonyl,mutase
R346 T670 T669 compound CoA,mutase
R347 T671 T672 punct [,5
R348 T672 T669 parataxis 5,mutase
R349 T673 T672 punct ],5
R350 T674 T616 punct .,limited
R351 T676 T677 amod Compound,heterozygotes
R352 T677 T678 nsubj heterozygotes,are
R353 T679 T678 attr individuals,are
R354 T680 T679 acl carrying,individuals
R355 T681 T682 nummod two,alleles
R356 T682 T680 dobj alleles,carrying
R357 T683 T682 amod different,alleles
R358 T684 T682 amod mutant,alleles
R359 T685 T682 prep of,alleles
R360 T686 T687 det the,gene
R362 T688 T687 amod same,gene
R363 T689 T678 punct .,are
R364 T691 T692 prep In,result
R365 T693 T694 det the,absence
R366 T694 T691 pobj absence,In
R367 T695 T694 prep of,absence
R368 T696 T697 det a,allele
R369 T697 T695 pobj allele,of
R370 T698 T697 amod dominant,allele
R371 T699 T697 punct (,allele
R372 T700 T701 amod wild,type
R373 T701 T697 nmod type,allele
R374 T702 T701 punct -,type
R375 T703 T701 punct [,type
R376 T704 T701 appos wt,type
R377 T705 T697 punct ],allele
R378 T706 T697 punct ),allele
R379 T707 T692 punct ", ",result
R380 T708 T709 amod genetic,interactions
R381 T709 T692 nsubj interactions,result
R382 T710 T709 prep between,interactions
R383 T711 T712 amod recessive,alleles
R384 T712 T710 pobj alleles,between
R385 T713 T709 punct (,interactions
R386 T714 T709 acl referred,interactions
R387 T715 T714 prep to,referred
R388 T716 T714 advmod here,referred
R389 T717 T714 prep as,referred
R390 T718 T717 punct “,as
R391 T719 T720 amod biallelic,effects
R393 T721 T720 punct ”,effects
R394 T722 T692 punct ),result
R395 T723 T692 aux could,result
R396 T724 T692 prep in,result
R397 T725 T726 amod different,outcomes
R399 T727 T726 amod phenotypic,outcomes
R400 T728 T726 prep including,outcomes
R401 T729 T730 amod interallelic,complementation
R402 T730 T728 pobj complementation,including
R403 T731 T692 punct .,result
R404 T733 T734 mark Although,create
R405 T734 T743 advcl create,caused
R406 T735 T734 nsubj amelioration,create
R407 T736 T735 prep of,amelioration
R408 T737 T738 compound disease,symptoms
R409 T738 T736 pobj symptoms,of
R410 T739 T735 prep by,amelioration
R411 T740 T741 amod interallelic,complementation
R412 T741 T739 pobj complementation,by
R413 T742 T734 aux would,create
R414 T744 T745 det an,bias
R416 T746 T745 compound ascertainment,bias
R417 T747 T734 prep in,create
R418 T748 T749 det the,clinic
R419 T749 T747 pobj clinic,in
R420 T750 T743 punct ", ",caused
R421 T751 T752 det the,lack
R422 T752 T743 nsubjpass lack,caused
R423 T753 T752 prep of,lack
R424 T754 T753 pobj evidence,of
R425 T755 T754 prep concerning,evidence
R426 T756 T757 amod interallelic,complementation
R427 T757 T755 pobj complementation,concerning
R428 T758 T757 cc or,complementation
R429 T759 T760 amod other,effects
R431 T761 T760 amod biallelic,effects
R432 T762 T757 prep in,complementation
R433 T763 T764 amod human,disease
R434 T764 T762 pobj disease,in
R435 T765 T743 auxpass is,caused
R436 T766 T743 advmod likely,caused
R437 T767 T743 agent by,caused
R438 T768 T769 det the,difficulty
R439 T769 T767 pobj difficulty,by
R440 T770 T769 prep in,difficulty
R441 T771 T770 pcomp distinguishing,in
R442 T772 T773 amod such,effects
R443 T773 T771 dobj effects,distinguishing
R444 T774 T771 prep from,distinguishing
R445 T775 T774 pobj environment,from
R446 T776 T775 cc and,environment
R447 T777 T778 amod genetic,background
R448 T778 T775 conj background,environment
R449 T779 T743 punct .,caused
R450 T781 T782 nsubj XPD,encodes
R451 T783 T782 dobj one,encodes
R452 T784 T783 prep of,one
R453 T785 T786 det the,components
R454 T786 T784 pobj components,of
R455 T787 T786 nummod two,components
R456 T788 T786 compound helicase,components
R457 T789 T786 prep of,components
R458 T790 T791 amod basal,IIH
R459 T791 T789 pobj IIH,of
R460 T792 T791 nmod transcription,IIH
R461 T793 T792 punct /,transcription
R462 T794 T795 compound DNA,repair
R463 T795 T792 appos repair,transcription
R464 T796 T791 compound factor,IIH
R465 T797 T791 punct (,IIH
R466 T798 T791 appos TFIIH,IIH
R467 T799 T783 punct ),one
R468 T800 T783 punct ", ",one
R469 T801 T802 det a,complex
R470 T802 T783 appos complex,one
R471 T803 T804 nummod ten,subunit
R472 T804 T802 nmod subunit,complex
R473 T805 T804 punct -,subunit
R474 T806 T802 punct ", ",complex
R475 T807 T802 amod multifunctional,complex
R476 T808 T809 dep that,is
R477 T809 T802 relcl is,complex
R478 T810 T809 acomp essential,is
R479 T811 T810 prep for,essential
R480 T812 T813 amod multiple,processes
R481 T813 T811 pobj processes,for
R482 T814 T813 punct ", ",processes
R483 T815 T813 prep including,processes
R484 T816 T817 amod basal,initiation
R486 T818 T817 compound transcription,initiation
R487 T819 T817 cc and,initiation
R488 T820 T821 compound DNA,repair
R490 T822 T821 compound damage,repair
R491 T823 T821 prep via,repair
R492 T824 T825 det the,pathway
R493 T825 T823 pobj pathway,via
R494 T826 T827 nmod nucleotide,repair
R495 T827 T825 nmod repair,pathway
R496 T828 T827 nmod excision,repair
R497 T829 T827 punct (,repair
R498 T830 T827 appos NER,repair
R499 T831 T825 punct ),pathway
R500 T832 T833 punct [,7
R501 T833 T783 parataxis 7,one
R502 T834 T833 nummod 6,7
R503 T835 T833 punct ",",7
R504 T836 T833 punct ],7
R505 T837 T782 punct .,encodes
R506 T839 T840 nsubjpass Alterations,associated
R507 T841 T839 prep in,Alterations
R508 T842 T841 pobj XPD,in
R509 T843 T839 acl resulting,Alterations
R510 T844 T843 prep in,resulting
R511 T845 T846 amod defective,function
R513 T847 T846 compound TFIIH,function
R514 T848 T840 auxpass are,associated
R515 T849 T840 prep with,associated
R516 T850 T851 npadvmod UV,sensitive
R518 T852 T851 punct -,sensitive
R519 T853 T849 pobj disorders,with
R520 T854 T853 punct ", ",disorders
R521 T855 T853 amod multisystem,disorders
R522 T856 T853 prep including,disorders
R523 T857 T858 compound xeroderma,pigmentosum
R524 T858 T856 pobj pigmentosum,including
R525 T859 T858 punct (,pigmentosum
R526 T860 T858 appos XP,pigmentosum
R527 T861 T858 punct ),pigmentosum
R528 T862 T858 punct ", ",pigmentosum
R529 T863 T858 conj XP,pigmentosum
R530 T864 T863 acl combined,XP
R531 T865 T864 prep with,combined
R532 T866 T867 compound Cockayne,syndrome
R533 T867 T865 pobj syndrome,with
R534 T868 T867 punct (,syndrome
R535 T869 T867 appos CS,syndrome
R536 T870 T863 punct ),XP
R537 T871 T863 punct ", ",XP
R538 T872 T863 cc and,XP
R539 T873 T863 conj trichothiodystrophy,XP
R540 T874 T873 punct (,trichothiodystrophy
R541 T875 T873 appos TTD,trichothiodystrophy
R542 T876 T840 punct ),associated
R543 T877 T878 punct [,8
R544 T878 T840 parataxis 8,associated
R545 T879 T880 punct –,10
R546 T880 T878 prep 10,8
R547 T881 T878 punct ],8
R548 T882 T840 punct .,associated
R549 T884 T885 nsubjpass XP,marked
R550 T886 T885 auxpass is,marked
R551 T887 T885 agent by,marked
R320 T644 T646 compound CoA,carboxylase
R345 T669 T662 conj mutase,uridylyltransferase
R361 T687 T685 pobj gene,of
R392 T720 T717 pobj effects,as
R398 T726 T724 pobj outcomes,in
R415 T745 T734 dobj bias,create
R430 T760 T757 conj effects,complementation
R485 T817 T815 pobj initiation,including
R489 T821 T817 conj repair,initiation
R512 T846 T844 pobj function,in
R517 T851 T853 amod sensitive,disorders

craft-ca-core-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T408 7-16 NCBITaxon:1 denotes organisms
T409 79-84 NCBITaxon:9606 denotes human
T410 132-139 SO:0001023 denotes allelic
T411 249-258 GO:0008152 denotes metabolic
T412 303-315 CHEBI:15539 denotes propinyl-CoA
T413 333-350 CHEBI:57472 denotes argininosuccinate
T414 362-383 CHEBI:53025 denotes galactose-1-phosphate
T415 413-430 CHEBI:16625 denotes methylmalonyl CoA
T416 470-481 NCBITaxon:1 denotes individuals
T417 512-519 SO:0001023 denotes alleles
T418 532-536 SO:0000704 denotes gene
T419 584-590 SO:0001023 denotes allele
T420 592-599 SO:0000704 denotes genetic
T421 631-638 SO:0001023 denotes alleles
T422 663-670 SO:0001023 denotes allelic
T423 742-749 SO:0001023 denotes allelic
T424 817-824 SO:0001023 denotes allelic
T425 928-935 SO:0001023 denotes allelic
T426 963-970 SO:0001023 denotes allelic
T427 982-987 NCBITaxon:9606 denotes human
T428 1083-1090 SO:0000704 denotes genetic
T429 1103-1106 PR:000007164 denotes XPD
T430 1153-1194 GO:0005675 denotes basal transcription/DNA repair factor IIH
T431 1173-1183 GO:0006281 denotes DNA repair
T432 1196-1201 GO:0005675 denotes TFIIH
T433 1235-1242 GO:0032991 denotes complex
T434 1330-1347 GO:0006281 denotes DNA damage repair
T435 1356-1382 GO:0006289 denotes nucleotide excision repair
T436 1384-1387 GO:0006289 denotes NER
T437 1419-1422 PR:000007164 denotes XPD
T438 1446-1451 GO:0005675 denotes TFIIH
T439 1500-1506 UBERON:0000467 denotes system

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the bag model. You can change it to the chain model.

Id Subject Object Predicate Lexical cue
T468 7-16 NCBITaxon:1 denotes organisms
T469 79-84 NCBITaxon:9606 denotes human
T470 132-139 SO_EXT:0001023 denotes allelic
T471 198-209 CHEBI_EXT:biochemical denotes biochemical
T472 214-218 CL_GO_EXT:cell denotes cell
T473 249-258 GO:0008152 denotes metabolic
T474 285-292 CHEBI_GO_SO_EXT:enzyme denotes enzymes
T475 303-315 CHEBI:15539 denotes propinyl-CoA
T476 303-327 GO_EXT:0004658 denotes propinyl-CoA carboxylase
T477 333-350 CHEBI:57472 denotes argininosuccinate
T478 333-356 GO_PR_EXT:argininosuccinate_lyase denotes argininosuccinate lyase
T479 362-383 CHEBI:53025 denotes galactose-1-phosphate
T480 362-403 GO_PR_EXT:galactose_1_phosphate_uridylyltransferase denotes galactose-1-phosphate uridylyltransferase
T481 413-430 CHEBI:16625 denotes methylmalonyl CoA
T482 413-437 GO_PR_EXT:methylmalonyl_CoA_mutase denotes methylmalonyl CoA mutase
T483 470-481 NCBITaxon:1 denotes individuals
T484 505-511 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T485 512-519 SO_EXT:0001023 denotes alleles
T486 532-536 SO_EXT:0000704 denotes gene
T487 568-577 SO_EXT:wild_type_entity_or_quality denotes wild-type
T488 579-581 SO_EXT:wild_type_entity_or_quality denotes wt
T489 584-590 SO_EXT:0001023 denotes allele
T490 592-599 SO_EXT:0000704 denotes genetic
T491 631-638 SO_EXT:0001023 denotes alleles
T492 663-670 SO_EXT:0001023 denotes allelic
T493 742-749 SO_EXT:0001023 denotes allelic
T494 817-824 SO_EXT:0001023 denotes allelic
T495 928-935 SO_EXT:0001023 denotes allelic
T496 963-970 SO_EXT:0001023 denotes allelic
T497 982-987 NCBITaxon:9606 denotes human
T498 1083-1090 SO_EXT:0000704 denotes genetic
T499 1103-1106 PR_EXT:000007164 denotes XPD
T500 1107-1114 SO_EXT:sequence_coding_function denotes encodes
T501 1130-1138 GO_EXT:0004386 denotes helicase
T502 1153-1194 GO:0005675 denotes basal transcription/DNA repair factor IIH
T503 1159-1172 GO_EXT:transcription denotes transcription
T505 1159-1172,1184-1190 GO_EXT:transcription_factor denotes transcription factor
T506 1173-1176 CHEBI_SO_EXT:DNA denotes DNA
T507 1173-1183 GO:0006281 denotes DNA repair
T508 1196-1201 GO:0005675 denotes TFIIH
T509 1235-1242 GO:0032991 denotes complex
T510 1301-1314 GO_EXT:transcription denotes transcription
T511 1330-1333 CHEBI_SO_EXT:DNA denotes DNA
T512 1330-1347 GO:0006281 denotes DNA damage repair
T513 1356-1366 CHEBI_SO_EXT:nucleotide denotes nucleotide
T514 1356-1382 GO:0006289 denotes nucleotide excision repair
T515 1367-1375 SO_EXT:sequence_deletion_process denotes excision
T516 1384-1387 GO:0006289 denotes NER
T517 1404-1415 SO_EXT:sequence_alteration_entity_or_process denotes Alterations
T518 1419-1422 PR_EXT:000007164 denotes XPD
T519 1446-1451 GO:0005675 denotes TFIIH
T520 1500-1506 UBERON:0000467 denotes system

2_test

Id Subject Object Predicate Lexical cue
17020410-8023851-84795120 329-330 8023851 denotes 2
17020410-6589607-84795121 358-359 6589607 denotes 3
17020410-8692963-84795122 405-406 8692963 denotes 4
17020410-7909321-84795123 439-440 7909321 denotes 5
17020410-15220921-84795124 1398-1399 15220921 denotes 6
17020410-8465201-84795125 1400-1401 8465201 denotes 7
17020410-11709541-84795126 1627-1628 11709541 denotes 8
17020410-11443545-84795126 1627-1628 11443545 denotes 8
T80536 329-330 8023851 denotes 2
T45327 358-359 6589607 denotes 3
T57048 405-406 8692963 denotes 4
T8272 439-440 7909321 denotes 5
T92258 1398-1399 15220921 denotes 6
T31924 1400-1401 8465201 denotes 7
T49919 1627-1628 11709541 denotes 8
T59412 1627-1628 11443545 denotes 8