
PMC:1564426 / 3749-4546
Annnotations
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2253 | 0-3 | PR_EXT:000004122 | denotes | APC |
T2254 | 26-30 | SO_EXT:0000704 | denotes | gene |
T2255 | 40-49 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutations |
T2256 | 53-56 | PR_EXT:000004122 | denotes | APC |
T2257 | 109-114 | UBERON:0001155 | denotes | colon |
T2258 | 119-125 | UBERON:0001052 | denotes | rectum |
T2259 | 127-136 | GO:0030849 | denotes | Autosomal |
T2260 | 155-164 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutations |
T2261 | 168-171 | PR_EXT:000004122 | denotes | APC |
T2262 | 307-317 | UBERON:0012652 | denotes | colorectal |
T2263 | 367-377 | UBERON:0012652 | denotes | colorectal |
T2264 | 420-424 | UBERON:0000104 | denotes | life |
T2265 | 447-457 | UBERON:0012652 | denotes | colorectal |
T2266 | 474-485 | NCBITaxon:1 | denotes | individuals |
T2267 | 503-510 | UBERON:0001155 | denotes | colonic |
T2268 | 543-565 | UBERON:0001555 | denotes | gastrointestinal tract |
T2269 | 604-630 | UBERON:0001782 | denotes | retinal pigment epithelium |
T2270 | 612-619 | CHEBI_EXT:26130 | denotes | pigment |
T2271 | 665-674 | UBERON:0002397 | denotes | maxillary |
T2272 | 679-687 | UBERON:0004288 | denotes | skeletal |
T2273 | 688-693 | UBERON:0001474 | denotes | bones |
T2274 | 699-705 | UBERON:0001091 | denotes | dental |
T2275 | 754-757 | PR_EXT:000004122 | denotes | APC |
T2276 | 758-762 | SO_EXT:0000704 | denotes | gene |
T2277 | 782-795 | UBERON:0000467 | denotes | organ systems |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2105 | 0-3 | PR:000004122 | denotes | APC |
T2106 | 26-30 | SO:0000704 | denotes | gene |
T2107 | 53-56 | PR:000004122 | denotes | APC |
T2108 | 109-114 | UBERON:0001155 | denotes | colon |
T2109 | 119-125 | UBERON:0001052 | denotes | rectum |
T2110 | 127-136 | GO:0030849 | denotes | Autosomal |
T2111 | 168-171 | PR:000004122 | denotes | APC |
T2112 | 307-317 | UBERON:0012652 | denotes | colorectal |
T2113 | 367-377 | UBERON:0012652 | denotes | colorectal |
T2114 | 420-424 | UBERON:0000104 | denotes | life |
T2115 | 447-457 | UBERON:0012652 | denotes | colorectal |
T2116 | 474-485 | NCBITaxon:1 | denotes | individuals |
T2117 | 503-510 | UBERON:0001155 | denotes | colonic |
T2118 | 543-565 | UBERON:0001555 | denotes | gastrointestinal tract |
T2119 | 604-630 | UBERON:0001782 | denotes | retinal pigment epithelium |
T2120 | 612-619 | CHEBI:26130 | denotes | pigment |
T2121 | 665-674 | UBERON:0002397 | denotes | maxillary |
T2122 | 679-687 | UBERON:0004288 | denotes | skeletal |
T2123 | 688-693 | UBERON:0001474 | denotes | bones |
T2124 | 699-705 | UBERON:0001091 | denotes | dental |
T2125 | 754-757 | PR:000004122 | denotes | APC |
T2126 | 758-762 | SO:0000704 | denotes | gene |
T2127 | 782-795 | UBERON:0000467 | denotes | organ systems |
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2555 | 0-3 | NN | denotes | APC |
T2556 | 4-6 | VBZ | denotes | is |
T2557 | 7-8 | DT | denotes | a |
T2558 | 26-30 | NN | denotes | gene |
T2559 | 9-14 | NN | denotes | tumor |
T2560 | 15-25 | NN | denotes | suppressor |
T2561 | 30-31 | . | denotes | . |
T2562 | 31-126 | sentence | denotes | Somatic mutations in APC are frequently found in many sporadic tumors of the colon and rectum. |
T2563 | 32-39 | JJ | denotes | Somatic |
T2564 | 40-49 | NNS | denotes | mutations |
T2565 | 72-77 | VBN | denotes | found |
T2566 | 50-52 | IN | denotes | in |
T2567 | 53-56 | NN | denotes | APC |
T2568 | 57-60 | VBP | denotes | are |
T2569 | 61-71 | RB | denotes | frequently |
T2570 | 78-80 | IN | denotes | in |
T2571 | 81-85 | JJ | denotes | many |
T2572 | 95-101 | NNS | denotes | tumors |
T2573 | 86-94 | JJ | denotes | sporadic |
T2574 | 102-104 | IN | denotes | of |
T2575 | 105-108 | DT | denotes | the |
T2576 | 109-114 | NN | denotes | colon |
T2577 | 115-118 | CC | denotes | and |
T2578 | 119-125 | NN | denotes | rectum |
T2579 | 125-126 | . | denotes | . |
T2580 | 126-248 | sentence | denotes | Autosomal dominant germline mutations in APC cause familial adenomatous polypois (FAP) and its variant, Gardner syndrome. |
T2581 | 127-136 | JJ | denotes | Autosomal |
T2582 | 155-164 | NNS | denotes | mutations |
T2583 | 137-145 | JJ | denotes | dominant |
T2584 | 146-154 | NN | denotes | germline |
T2585 | 172-177 | VBP | denotes | cause |
T2586 | 165-167 | IN | denotes | in |
T2587 | 168-171 | NN | denotes | APC |
T2588 | 178-186 | JJ | denotes | familial |
T2589 | 199-207 | NN | denotes | polypois |
T2590 | 187-198 | JJ | denotes | adenomatous |
T2591 | 208-209 | -LRB- | denotes | ( |
T2592 | 209-212 | NN | denotes | FAP |
T2593 | 212-213 | -RRB- | denotes | ) |
T2594 | 214-217 | CC | denotes | and |
T2595 | 218-221 | PRP$ | denotes | its |
T2596 | 222-229 | NN | denotes | variant |
T2597 | 229-231 | , | denotes | , |
T2598 | 231-238 | NNP | denotes | Gardner |
T2599 | 239-247 | NN | denotes | syndrome |
T2600 | 247-248 | . | denotes | . |
T2601 | 248-431 | sentence | denotes | FAP patients are characterized by hundreds of adenomatous colorectal polyps, with an almost inevitable progression to colorectal cancer in the third and fourth decades of life [4,5]. |
T2602 | 249-252 | NN | denotes | FAP |
T2603 | 253-261 | NNS | denotes | patients |
T2604 | 266-279 | VBN | denotes | characterized |
T2605 | 262-265 | VBP | denotes | are |
T2606 | 280-282 | IN | denotes | by |
T2607 | 283-291 | NNS | denotes | hundreds |
T2608 | 292-294 | IN | denotes | of |
T2609 | 295-306 | JJ | denotes | adenomatous |
T2610 | 318-324 | NNS | denotes | polyps |
T2611 | 307-317 | JJ | denotes | colorectal |
T2612 | 324-326 | , | denotes | , |
T2613 | 326-330 | IN | denotes | with |
T2614 | 331-333 | DT | denotes | an |
T2615 | 352-363 | NN | denotes | progression |
T2616 | 334-340 | RB | denotes | almost |
T2617 | 341-351 | JJ | denotes | inevitable |
T2618 | 364-366 | IN | denotes | to |
T2619 | 367-377 | JJ | denotes | colorectal |
T2620 | 378-384 | NN | denotes | cancer |
T2621 | 385-387 | IN | denotes | in |
T2622 | 388-391 | DT | denotes | the |
T2623 | 409-416 | NNS | denotes | decades |
T2624 | 392-397 | JJ | denotes | third |
T2625 | 398-401 | CC | denotes | and |
T2626 | 402-408 | JJ | denotes | fourth |
T2627 | 417-419 | IN | denotes | of |
T2628 | 420-424 | NN | denotes | life |
T2629 | 425-426 | -LRB- | denotes | [ |
T2630 | 428-429 | CD | denotes | 5 |
T2631 | 426-427 | CD | denotes | 4 |
T2632 | 427-428 | , | denotes | , |
T2633 | 429-430 | -RRB- | denotes | ] |
T2634 | 430-431 | . | denotes | . |
T2635 | 431-796 | sentence | denotes | In addition to colorectal neoplams, these individuals can develop extracolonic symptoms, among which are upper gastrointestinal tract polyps, congenital hypertrophy of the retinal pigment epithelium, desmoid tumors, disorders of the maxillary and skeletal bones, and dental abnormalities [6], suggesting the importance of APC gene functions in these organ systems. |
T2636 | 432-434 | IN | denotes | In |
T2637 | 490-497 | VB | denotes | develop |
T2638 | 435-443 | NN | denotes | addition |
T2639 | 444-446 | IN | denotes | to |
T2640 | 447-457 | JJ | denotes | colorectal |
T2641 | 458-466 | NNS | denotes | neoplams |
T2642 | 466-468 | , | denotes | , |
T2643 | 468-473 | DT | denotes | these |
T2644 | 474-485 | NNS | denotes | individuals |
T2645 | 486-489 | MD | denotes | can |
T2646 | 498-510 | JJ | denotes | extracolonic |
T2647 | 511-519 | NNS | denotes | symptoms |
T2648 | 519-521 | , | denotes | , |
T2649 | 521-526 | IN | denotes | among |
T2650 | 533-536 | VBP | denotes | are |
T2651 | 527-532 | WDT | denotes | which |
T2652 | 537-542 | JJ | denotes | upper |
T2653 | 560-565 | NN | denotes | tract |
T2654 | 543-559 | JJ | denotes | gastrointestinal |
T2655 | 566-572 | NNS | denotes | polyps |
T2656 | 572-574 | , | denotes | , |
T2657 | 574-584 | JJ | denotes | congenital |
T2658 | 585-596 | NN | denotes | hypertrophy |
T2659 | 597-599 | IN | denotes | of |
T2660 | 600-603 | DT | denotes | the |
T2661 | 620-630 | NN | denotes | epithelium |
T2662 | 604-611 | JJ | denotes | retinal |
T2663 | 612-619 | NN | denotes | pigment |
T2664 | 630-632 | , | denotes | , |
T2665 | 632-639 | JJ | denotes | desmoid |
T2666 | 640-646 | NNS | denotes | tumors |
T2667 | 646-648 | , | denotes | , |
T2668 | 648-657 | NNS | denotes | disorders |
T2669 | 658-660 | IN | denotes | of |
T2670 | 661-664 | DT | denotes | the |
T2671 | 688-693 | NNS | denotes | bones |
T2672 | 665-674 | JJ | denotes | maxillary |
T2673 | 675-678 | CC | denotes | and |
T2674 | 679-687 | JJ | denotes | skeletal |
T2675 | 693-695 | , | denotes | , |
T2676 | 695-698 | CC | denotes | and |
T2677 | 699-705 | JJ | denotes | dental |
T2678 | 706-719 | NNS | denotes | abnormalities |
T2679 | 720-721 | -LRB- | denotes | [ |
T2680 | 721-722 | CD | denotes | 6 |
T2681 | 722-723 | -RRB- | denotes | ] |
T2682 | 723-725 | , | denotes | , |
T2683 | 725-735 | VBG | denotes | suggesting |
T2684 | 736-739 | DT | denotes | the |
T2685 | 740-750 | NN | denotes | importance |
T2686 | 751-753 | IN | denotes | of |
T2687 | 754-757 | NN | denotes | APC |
T2688 | 758-762 | NN | denotes | gene |
T2689 | 763-772 | VBZ | denotes | functions |
T2690 | 773-775 | IN | denotes | in |
T2691 | 776-781 | DT | denotes | these |
T2692 | 788-795 | NNS | denotes | systems |
T2693 | 782-787 | NN | denotes | organ |
T2694 | 795-796 | . | denotes | . |
R428 | T2555 | T2556 | nsubj | APC,is |
R429 | T2557 | T2558 | det | a,gene |
R430 | T2558 | T2556 | attr | gene,is |
R431 | T2559 | T2560 | compound | tumor,suppressor |
R432 | T2560 | T2558 | compound | suppressor,gene |
R433 | T2561 | T2556 | punct | .,is |
R434 | T2563 | T2564 | amod | Somatic,mutations |
R435 | T2605 | T2604 | auxpass | are,characterized |
R436 | T2564 | T2565 | nsubjpass | mutations,found |
R437 | T2606 | T2604 | agent | by,characterized |
R438 | T2607 | T2606 | pobj | hundreds,by |
R439 | T2566 | T2564 | prep | in,mutations |
R440 | T2608 | T2607 | prep | of,hundreds |
R441 | T2609 | T2610 | amod | adenomatous,polyps |
R442 | T2610 | T2608 | pobj | polyps,of |
R443 | T2611 | T2610 | amod | colorectal,polyps |
R444 | T2612 | T2610 | punct | ", ",polyps |
R445 | T2613 | T2610 | prep | with,polyps |
R446 | T2567 | T2566 | pobj | APC,in |
R447 | T2614 | T2615 | det | an,progression |
R448 | T2615 | T2613 | pobj | progression,with |
R449 | T2616 | T2617 | advmod | almost,inevitable |
R450 | T2617 | T2615 | amod | inevitable,progression |
R451 | T2568 | T2565 | auxpass | are,found |
R452 | T2618 | T2615 | prep | to,progression |
R453 | T2619 | T2620 | amod | colorectal,cancer |
R454 | T2620 | T2618 | pobj | cancer,to |
R455 | T2569 | T2565 | advmod | frequently,found |
R456 | T2621 | T2615 | prep | in,progression |
R457 | T2622 | T2623 | det | the,decades |
R458 | T2623 | T2621 | pobj | decades,in |
R459 | T2570 | T2565 | prep | in,found |
R460 | T2624 | T2623 | amod | third,decades |
R461 | T2625 | T2624 | cc | and,third |
R462 | T2626 | T2624 | conj | fourth,third |
R463 | T2571 | T2572 | amod | many,tumors |
R464 | T2627 | T2623 | prep | of,decades |
R465 | T2628 | T2627 | pobj | life,of |
R466 | T2629 | T2630 | punct | [,5 |
R467 | T2630 | T2604 | parataxis | 5,characterized |
R468 | T2572 | T2570 | pobj | tumors,in |
R469 | T2631 | T2630 | nummod | 4,5 |
R470 | T2632 | T2630 | punct | ",",5 |
R471 | T2633 | T2630 | punct | ],5 |
R472 | T2573 | T2572 | amod | sporadic,tumors |
R473 | T2634 | T2604 | punct | .,characterized |
R474 | T2574 | T2572 | prep | of,tumors |
R475 | T2636 | T2637 | prep | In,develop |
R476 | T2575 | T2576 | det | the,colon |
R477 | T2638 | T2636 | pobj | addition,In |
R478 | T2639 | T2638 | prep | to,addition |
R479 | T2640 | T2641 | amod | colorectal,neoplams |
R480 | T2641 | T2639 | pobj | neoplams,to |
R481 | T2576 | T2574 | pobj | colon,of |
R482 | T2642 | T2637 | punct | ", ",develop |
R483 | T2643 | T2644 | det | these,individuals |
R484 | T2644 | T2637 | nsubj | individuals,develop |
R485 | T2577 | T2576 | cc | and,colon |
R486 | T2645 | T2637 | aux | can,develop |
R487 | T2646 | T2647 | amod | extracolonic,symptoms |
R488 | T2647 | T2637 | dobj | symptoms,develop |
R489 | T2648 | T2647 | punct | ", ",symptoms |
R490 | T2578 | T2576 | conj | rectum,colon |
R491 | T2649 | T2650 | prep | among,are |
R492 | T2650 | T2647 | relcl | are,symptoms |
R493 | T2579 | T2565 | punct | .,found |
R494 | T2651 | T2649 | pobj | which,among |
R495 | T2652 | T2653 | amod | upper,tract |
R496 | T2653 | T2655 | compound | tract,polyps |
R497 | T2654 | T2653 | amod | gastrointestinal,tract |
R498 | T2655 | T2650 | nsubj | polyps,are |
R499 | T2656 | T2655 | punct | ", ",polyps |
R500 | T2657 | T2658 | amod | congenital,hypertrophy |
R501 | T2581 | T2582 | amod | Autosomal,mutations |
R502 | T2658 | T2655 | conj | hypertrophy,polyps |
R503 | T2659 | T2658 | prep | of,hypertrophy |
R504 | T2660 | T2661 | det | the,epithelium |
R505 | T2661 | T2659 | pobj | epithelium,of |
R506 | T2582 | T2585 | nsubj | mutations,cause |
R507 | T2662 | T2663 | amod | retinal,pigment |
R508 | T2663 | T2661 | compound | pigment,epithelium |
R509 | T2664 | T2658 | punct | ", ",hypertrophy |
R510 | T2583 | T2582 | amod | dominant,mutations |
R511 | T2665 | T2666 | amod | desmoid,tumors |
R512 | T2666 | T2658 | conj | tumors,hypertrophy |
R513 | T2667 | T2666 | punct | ", ",tumors |
R514 | T2584 | T2582 | compound | germline,mutations |
R515 | T2668 | T2666 | conj | disorders,tumors |
R516 | T2669 | T2668 | prep | of,disorders |
R517 | T2670 | T2671 | det | the,bones |
R518 | T2586 | T2582 | prep | in,mutations |
R519 | T2587 | T2586 | pobj | APC,in |
R520 | T2671 | T2669 | pobj | bones,of |
R521 | T2672 | T2671 | amod | maxillary,bones |
R522 | T2588 | T2589 | amod | familial,polypois |
R523 | T2673 | T2672 | cc | and,maxillary |
R524 | T2674 | T2672 | conj | skeletal,maxillary |
R525 | T2675 | T2668 | punct | ", ",disorders |
R526 | T2589 | T2585 | dobj | polypois,cause |
R527 | T2676 | T2668 | cc | and,disorders |
R528 | T2677 | T2678 | amod | dental,abnormalities |
R529 | T2590 | T2589 | amod | adenomatous,polypois |
R530 | T2678 | T2668 | conj | abnormalities,disorders |
R531 | T2679 | T2680 | punct | [,6 |
R532 | T2680 | T2650 | parataxis | 6,are |
R533 | T2591 | T2589 | punct | (,polypois |
R534 | T2681 | T2680 | punct | ],6 |
R535 | T2682 | T2650 | punct | ", ",are |
R536 | T2683 | T2650 | advcl | suggesting,are |
R537 | T2592 | T2589 | appos | FAP,polypois |
R538 | T2684 | T2685 | det | the,importance |
R539 | T2685 | T2683 | dobj | importance,suggesting |
R540 | T2686 | T2685 | prep | of,importance |
R541 | T2593 | T2589 | punct | ),polypois |
R542 | T2687 | T2688 | compound | APC,gene |
R543 | T2688 | T2686 | pobj | gene,of |
R544 | T2689 | T2688 | nmod | functions,gene |
R545 | T2594 | T2589 | cc | and,polypois |
R546 | T2690 | T2685 | prep | in,importance |
R547 | T2691 | T2692 | det | these,systems |
R548 | T2692 | T2690 | pobj | systems,in |
R549 | T2693 | T2692 | compound | organ,systems |
R550 | T2694 | T2637 | punct | .,develop |
R552 | T2595 | T2596 | poss | its,variant |
R556 | T2596 | T2589 | conj | variant,polypois |
R560 | T2597 | T2596 | punct | ", ",variant |
R565 | T2598 | T2599 | compound | Gardner,syndrome |
R568 | T2599 | T2596 | appos | syndrome,variant |
R570 | T2600 | T2585 | punct | .,cause |
R571 | T2602 | T2603 | compound | FAP,patients |
R572 | T2603 | T2604 | nsubjpass | patients,characterized |
2_test
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
17002498-8861899-85593493 | 426-427 | 8861899 | denotes | 4 |
17002498-1651174-85593494 | 428-429 | 1651174 | denotes | 5 |
17002498-16454848-85593495 | 721-722 | 16454848 | denotes | 6 |
T18617 | 426-427 | 8861899 | denotes | 4 |
T46649 | 428-429 | 1651174 | denotes | 5 |
T91666 | 721-722 | 16454848 | denotes | 6 |