PMC:1564426 / 33207-34581 JSONTXT

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    craft-ca-core-ex-dev

    {"project":"craft-ca-core-ex-dev","denotations":[{"id":"T17086","span":{"begin":34,"end":40},"obj":"UBERON:0002370"},{"id":"T17087","span":{"begin":75,"end":82},"obj":"SO_EXT:sequence_altered_entity"},{"id":"T17088","span":{"begin":107,"end":113},"obj":"UBERON:0002370"},{"id":"T17089","span":{"begin":130,"end":137},"obj":"UBERON:0009911"},{"id":"T17090","span":{"begin":155,"end":159},"obj":"NCBITaxon:10088"},{"id":"T17091","span":{"begin":168,"end":174},"obj":"SO_EXT:sequence_altered_entity_or_alteration_process"},{"id":"T17092","span":{"begin":175,"end":181},"obj":"UBERON:0002370"},{"id":"T17093","span":{"begin":327,"end":333},"obj":"SO_EXT:sequence_altered_entity_or_alteration_process"},{"id":"T17094","span":{"begin":334,"end":338},"obj":"NCBITaxon_UBERON_EXT:pup"},{"id":"T17095","span":{"begin":419,"end":425},"obj":"UBERON:0002370"},{"id":"T17096","span":{"begin":435,"end":441},"obj":"SO_EXT:sequence_altered_entity_or_alteration_process"},{"id":"T17097","span":{"begin":442,"end":445},"obj":"NCBITaxon_UBERON_EXT:pup"},{"id":"T17098","span":{"begin":493,"end":497},"obj":"UBERON_EXT:body"},{"id":"T17099","span":{"begin":561,"end":567},"obj":"UBERON:0002370"},{"id":"T17100","span":{"begin":622,"end":628},"obj":"SO_EXT:sequence_altered_entity_or_alteration_process"},{"id":"T17101","span":{"begin":682,"end":688},"obj":"SO_EXT:sequence_altered_entity_or_alteration_process"},{"id":"T17102","span":{"begin":689,"end":695},"obj":"UBERON:0002370"},{"id":"T17103","span":{"begin":794,"end":804},"obj":"UBERON:0000483"},{"id":"T17104","span":{"begin":821,"end":827},"obj":"UBERON:0002370"},{"id":"T17105","span":{"begin":892,"end":902},"obj":"CL:0000893"},{"id":"T17106","span":{"begin":918,"end":924},"obj":"UBERON:0001851"},{"id":"T17107","span":{"begin":952,"end":966},"obj":"_FRAGMENT"},{"id":"T17108","span":{"begin":983,"end":988},"obj":"UBERON_EXT:cell_clump_or_cluster_or_group_or_mass_or_population"},{"id":"T17109","span":{"begin":983,"end":988},"obj":"CL_GO_EXT:cell"},{"id":"T17110","span":{"begin":992,"end":993},"obj":"CHEBI:51686"},{"id":"T17111","span":{"begin":994,"end":995},"obj":"CHEBI_EXT:eosin"},{"id":"T17112","span":{"begin":1033,"end":1039},"obj":"UBERON:0001851"},{"id":"T17113","span":{"begin":1054,"end":1061},"obj":"UBERON:0000958"},{"id":"T17114","span":{"begin":1085,"end":1090},"obj":"CL_GO_EXT:cell"},{"id":"T17115","span":{"begin":1106,"end":1113},"obj":"GO:0005634"},{"id":"T17116","span":{"begin":1114,"end":1123},"obj":"PR_EXT:000002198"},{"id":"T17117","span":{"begin":1157,"end":1166},"obj":"UBERON:0000958"},{"id":"T17118","span":{"begin":1167,"end":1172},"obj":"CL_GO_EXT:cell"},{"id":"T17119","span":{"begin":1188,"end":1197},"obj":"PR_EXT:000002198"},{"id":"T17120","span":{"begin":1259,"end":1271},"obj":"GO_PATO_EXT:biological_localization_process_or_quality"},{"id":"T17121","span":{"begin":1275,"end":1278},"obj":"PR_EXT:000009454"},{"id":"T17122","span":{"begin":1300,"end":1305},"obj":"CL_GO_EXT:cell"},{"id":"T17123","span":{"begin":1313,"end":1320},"obj":"UBERON:0000958"},{"id":"T17124","span":{"begin":1346,"end":1348},"obj":"PR_EXT:000009495"},{"id":"T17125","span":{"begin":1349,"end":1361},"obj":"GO_PATO_EXT:biological_localization_process_or_quality"}],"relations":[{"id":"R4560","pred":"_lexicallyChainedTo","subj":"T17108","obj":"T17107"}],"text":"The histological abnormalities of thymus were evident as early as P3 in KA mutants (Figure 6E and 6H). The thymus was made of two lobules as in the normal mice but the mutant thymus was significantly smaller in size than that of the age-matched controls (Figure 2G). Interestingly, variations in the phenotypic severity of the mutant pups at P3 were prominently reflected in the extent of histological abnormalities of thymus. A P3 KA mutant pup that showed milder phenotype with a comparable body weight to its normal littermates (Figure 2A, M2) showed milder thymus abnormalities (Figure 6E) compared to its more severe mutant littermate (Figure 2A, M1; Figure 6H). The milder P3 mutant thymus was already much smaller in size compared to those of normal littermates (data not shown) but two epithelial compartments of thymus were histologically still distinguishable, with colonization of thymocytes evident in the cortex. However, there were small populations of lightly stained cells by H\u0026E extending from the edge of the outer cortex towards inner medulla (Figure 6E), and these cells showed intense nuclear β-catenin staining whereas the rest of the medullary cells showed diffuse β-catenin staining pattern similar to that of the control (Figure 6F). Localization of K14 was limited to a few cells in the medulla and some overlapped with K8 localization (Figure 6G)."}

    craft-ca-core-dev

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    craft-sa-dev

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histological abnormalities of thymus were evident as early as P3 in KA mutants (Figure 6E and 6H). The thymus was made of two lobules as in the normal mice but the mutant thymus was significantly smaller in size than that of the age-matched controls (Figure 2G). Interestingly, variations in the phenotypic severity of the mutant pups at P3 were prominently reflected in the extent of histological abnormalities of thymus. A P3 KA mutant pup that showed milder phenotype with a comparable body weight to its normal littermates (Figure 2A, M2) showed milder thymus abnormalities (Figure 6E) compared to its more severe mutant littermate (Figure 2A, M1; Figure 6H). The milder P3 mutant thymus was already much smaller in size compared to those of normal littermates (data not shown) but two epithelial compartments of thymus were histologically still distinguishable, with colonization of thymocytes evident in the cortex. However, there were small populations of lightly stained cells by H\u0026E extending from the edge of the outer cortex towards inner medulla (Figure 6E), and these cells showed intense nuclear β-catenin staining whereas the rest of the medullary cells showed diffuse β-catenin staining pattern similar to that of the control (Figure 6F). Localization of K14 was limited to a few cells in the medulla and some overlapped with K8 localization (Figure 6G)."}