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PMC:1564426 / 11771-12347 JSONTXT

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craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T7497 17-25 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T7498 29-32 PR_EXT:000004122 denotes Apc
T7499 38-43 CL_GO_EXT:cell denotes cells
T7500 44-54 GO:0010467 denotes expressing
T7501 55-58 PR_EXT:000009454 denotes K14
T7502 75-82 CL:0002322 denotes ES cell
T7503 78-82 CL_GO_EXT:cell denotes cell
T7504 96-99 PR_EXT:000004122 denotes Apc
T7505 103-104 SO_EXT:normal_or_wild_type_or_present denotes +
T7506 105-109 NCBITaxon:10088 denotes mice
T7507 115-118 PR_EXT:000009454 denotes K14
T7508 123-134 GO_EXT:recombinase denotes recombinase
T7509 135-139 NCBITaxon:10088 denotes mice
T7510 168-171 PR_EXT:000009454 denotes K14
T7511 177-180 PR_EXT:000004122 denotes Apc
T7512 184-185 SO_EXT:normal_or_wild_type_or_present denotes +
T7513 186-190 NCBITaxon:10088 denotes mice
T7514 235-238 PR_EXT:000009454 denotes K14
T7515 244-247 PR_EXT:000004122 denotes Apc
T7516 251-252 SO_EXT:normal_or_wild_type_or_present denotes +
T7517 253-258 PATO_UBERON_EXT:male_or_bearer_of_maleness denotes males
T7518 275-278 PR_EXT:000004122 denotes Apc
T7519 286-293 PATO_UBERON_EXT:female_or_bearer_of_femaleness denotes females
T7520 335-342 CL:0000023 denotes oocytes
T7521 346-349 PR_EXT:000009454 denotes K14
T7522 363-370 PATO_UBERON_EXT:female_or_bearer_of_femaleness denotes females
T7523 381-385 NCBITaxon:10088 denotes mice
T7524 443-447 NCBITaxon:10088 denotes mice

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T7378 29-32 PR:000004122 denotes Apc
T7379 44-54 GO:0010467 denotes expressing
T7380 55-58 PR:000009454 denotes K14
T7381 75-82 CL:0002322 denotes ES cell
T7382 96-99 PR:000004122 denotes Apc
T7383 105-109 NCBITaxon:10088 denotes mice
T7384 115-118 PR:000009454 denotes K14
T7385 135-139 NCBITaxon:10088 denotes mice
T7386 168-171 PR:000009454 denotes K14
T7387 177-180 PR:000004122 denotes Apc
T7388 186-190 NCBITaxon:10088 denotes mice
T7389 235-238 PR:000009454 denotes K14
T7390 244-247 PR:000004122 denotes Apc
T7391 275-278 PR:000004122 denotes Apc
T7392 335-342 CL:0000023 denotes oocytes
T7393 346-349 PR:000009454 denotes K14
T7394 381-385 NCBITaxon:10088 denotes mice
T7395 443-447 NCBITaxon:10088 denotes mice

craft-sa-dev

Id Subject Object Predicate Lexical cue
T7689 0-2 TO denotes To
T7690 3-12 VB denotes introduce
T7691 63-70 VBD denotes crossed
T7692 13-16 DT denotes the
T7693 17-25 NN denotes mutation
T7694 26-28 IN denotes of
T7695 29-32 NN denotes Apc
T7696 33-37 IN denotes into
T7697 38-43 NNS denotes cells
T7698 44-54 VBG denotes expressing
T7699 55-58 NN denotes K14
T7700 58-60 , denotes ,
T7701 60-62 PRP denotes we
T7702 71-74 NN denotes WW6
T7703 105-109 NNS denotes mice
T7704 75-77 NN denotes ES
T7705 78-82 NN denotes cell
T7706 83-90 VBN denotes derived
T7707 82-83 HYPH denotes –
T7708 91-92 -LRB- denotes [
T7709 92-94 CD denotes 15
T7710 94-95 -RRB- denotes ]
T7711 96-102 NN denotes ApcCKO
T7712 102-103 HYPH denotes /
T7713 103-104 SYM denotes +
T7714 110-114 IN denotes with
T7715 115-118 NN denotes K14
T7716 119-122 NN denotes cre
T7717 118-119 HYPH denotes -
T7718 135-139 NNS denotes mice
T7719 123-134 NN denotes recombinase
T7720 140-142 IN denotes in
T7721 143-146 NN denotes FVB
T7722 147-157 NN denotes background
T7723 158-159 -LRB- denotes [
T7724 159-161 CD denotes 16
T7725 161-162 -RRB- denotes ]
T7726 162-163 . denotes .
T7727 163-234 sentence denotes The K14-cre; ApcCKO/+ mice were normal in appearance and were fertile.
T7728 164-167 DT denotes The
T7729 186-190 NNS denotes mice
T7730 168-171 NN denotes K14
T7731 172-175 NN denotes cre
T7732 171-172 HYPH denotes -
T7733 175-176 : denotes ;
T7734 177-183 NN denotes ApcCKO
T7735 183-184 HYPH denotes /
T7736 184-185 SYM denotes +
T7737 191-195 VBD denotes were
T7738 196-202 JJ denotes normal
T7739 203-205 IN denotes in
T7740 206-216 NN denotes appearance
T7741 217-220 CC denotes and
T7742 221-225 VBD denotes were
T7743 226-233 JJ denotes fertile
T7744 233-234 . denotes .
T7745 234-376 sentence denotes K14-cre; ApcCKO/+ males were crossed to ApcCKO/CKO females to avoid the potential deleter effect in oocytes of K14-cre–positive females [17].
T7746 235-238 NN denotes K14
T7747 239-242 NN denotes cre
T7748 238-239 HYPH denotes -
T7749 253-258 NNS denotes males
T7750 242-243 : denotes ;
T7751 244-250 NN denotes ApcCKO
T7752 250-251 HYPH denotes /
T7753 251-252 SYM denotes +
T7754 264-271 VBN denotes crossed
T7755 259-263 VBD denotes were
T7756 272-274 IN denotes to
T7757 275-281 NN denotes ApcCKO
T7758 282-285 NN denotes CKO
T7759 281-282 HYPH denotes /
T7760 286-293 NNS denotes females
T7761 294-296 TO denotes to
T7762 297-302 VB denotes avoid
T7763 303-306 DT denotes the
T7764 325-331 NN denotes effect
T7765 307-316 JJ denotes potential
T7766 317-324 NN denotes deleter
T7767 332-334 IN denotes in
T7768 335-342 NNS denotes oocytes
T7769 343-345 IN denotes of
T7770 346-349 NN denotes K14
T7771 350-353 NN denotes cre
T7772 349-350 HYPH denotes -
T7773 354-362 JJ denotes positive
T7774 353-354 HYPH denotes –
T7775 363-370 NNS denotes females
T7776 371-372 -LRB- denotes [
T7777 372-374 CD denotes 17
T7778 374-375 -RRB- denotes ]
T7779 375-376 . denotes .
T7780 376-576 sentence denotes The mice were intercrossed thereafter for maintenance; hence, the mice used for analysis were in a mixed background of FVB, 129/S, and C57BL/6 in similar proportions, with minimal contribution of SJ.
T7781 377-380 DT denotes The
T7782 381-385 NNS denotes mice
T7783 391-403 VBN denotes intercrossed
T7784 386-390 VBD denotes were
T7785 466-470 VBD denotes were
T7786 404-414 RB denotes thereafter
T7787 415-418 IN denotes for
T7788 419-430 NN denotes maintenance
T7789 430-431 : denotes ;
T7790 432-437 RB denotes hence
T7791 437-439 , denotes ,
T7792 439-442 DT denotes the
T7793 443-447 NNS denotes mice
T7794 448-452 VBN denotes used
T7795 453-456 IN denotes for
T7796 457-465 NN denotes analysis
T7797 471-473 IN denotes in
T7798 474-475 DT denotes a
T7799 482-492 NN denotes background
T7800 476-481 VBN denotes mixed
T7801 493-495 IN denotes of
T7802 496-499 NN denotes FVB
T7803 499-501 , denotes ,
T7804 501-504 CD denotes 129
T7805 505-506 NN denotes S
T7806 504-505 HYPH denotes /
T7807 506-508 , denotes ,
T7808 508-511 CC denotes and
T7809 512-517 NN denotes C57BL
T7810 517-518 HYPH denotes /
T7811 518-519 CD denotes 6
T7812 520-522 IN denotes in
T7813 523-530 JJ denotes similar
T7814 531-542 NNS denotes proportions
T7815 542-544 , denotes ,
T7816 544-548 IN denotes with
T7817 549-556 JJ denotes minimal
T7818 557-569 NN denotes contribution
T7819 570-572 IN denotes of
T7820 573-575 NN denotes SJ
T7821 575-576 . denotes .
R1608 T7689 T7690 aux To,introduce
R1609 T7690 T7691 advcl introduce,crossed
R1610 T7692 T7693 det the,mutation
R1611 T7693 T7690 dobj mutation,introduce
R1612 T7694 T7693 prep of,mutation
R1613 T7695 T7694 pobj Apc,of
R1614 T7696 T7690 prep into,introduce
R1615 T7697 T7696 pobj cells,into
R1616 T7698 T7697 acl expressing,cells
R1617 T7699 T7698 dobj K14,expressing
R1618 T7700 T7691 punct ", ",crossed
R1619 T7701 T7691 nsubj we,crossed
R1620 T7702 T7703 nmod WW6,mice
R1621 T7703 T7691 dobj mice,crossed
R1622 T7704 T7705 compound ES,cell
R1623 T7705 T7706 npadvmod cell,derived
R1624 T7706 T7703 amod derived,mice
R1625 T7707 T7706 punct –,derived
R1626 T7708 T7709 punct [,15
R1627 T7709 T7706 parataxis 15,derived
R1628 T7710 T7709 punct ],15
R1629 T7711 T7703 nmod ApcCKO,mice
R1630 T7712 T7711 punct /,ApcCKO
R1631 T7713 T7711 punct +,ApcCKO
R1632 T7714 T7703 prep with,mice
R1633 T7715 T7716 compound K14,cre
R1634 T7716 T7718 compound cre,mice
R1635 T7717 T7716 punct -,cre
R1636 T7718 T7714 pobj mice,with
R1637 T7719 T7718 compound recombinase,mice
R1638 T7720 T7703 prep in,mice
R1639 T7721 T7722 compound FVB,background
R1640 T7722 T7720 pobj background,in
R1641 T7723 T7724 punct [,16
R1642 T7724 T7691 parataxis 16,crossed
R1643 T7725 T7724 punct ],16
R1644 T7726 T7691 punct .,crossed
R1645 T7728 T7729 det The,mice
R1646 T7729 T7737 nsubj mice,were
R1647 T7730 T7731 nmod K14,cre
R1648 T7731 T7729 nmod cre,mice
R1649 T7732 T7731 punct -,cre
R1650 T7733 T7731 punct ;,cre
R1651 T7734 T7731 appos ApcCKO,cre
R1652 T7735 T7734 punct /,ApcCKO
R1653 T7736 T7734 punct +,ApcCKO
R1654 T7738 T7737 acomp normal,were
R1655 T7739 T7737 prep in,were
R1656 T7740 T7739 pobj appearance,in
R1657 T7741 T7737 cc and,were
R1658 T7742 T7737 conj were,were
R1659 T7743 T7742 acomp fertile,were
R1660 T7744 T7737 punct .,were
R1661 T7746 T7747 nmod K14,cre
R1662 T7747 T7749 nmod cre,males
R1663 T7748 T7747 punct -,cre
R1664 T7749 T7754 nsubjpass males,crossed
R1665 T7750 T7747 punct ;,cre
R1666 T7751 T7747 appos ApcCKO,cre
R1667 T7752 T7751 punct /,ApcCKO
R1668 T7753 T7751 punct +,ApcCKO
R1669 T7755 T7754 auxpass were,crossed
R1670 T7756 T7754 prep to,crossed
R1671 T7757 T7758 compound ApcCKO,CKO
R1672 T7758 T7760 compound CKO,females
R1673 T7759 T7758 punct /,CKO
R1674 T7760 T7756 pobj females,to
R1675 T7761 T7762 aux to,avoid
R1676 T7762 T7754 advcl avoid,crossed
R1677 T7763 T7764 det the,effect
R1678 T7764 T7762 dobj effect,avoid
R1679 T7765 T7764 amod potential,effect
R1680 T7766 T7764 compound deleter,effect
R1681 T7767 T7762 prep in,avoid
R1682 T7768 T7767 pobj oocytes,in
R1683 T7769 T7768 prep of,oocytes
R1684 T7770 T7771 compound K14,cre
R1685 T7771 T7773 npadvmod cre,positive
R1686 T7772 T7771 punct -,cre
R1687 T7773 T7775 amod positive,females
R1688 T7774 T7773 punct –,positive
R1689 T7775 T7769 pobj females,of
R1690 T7776 T7777 punct [,17
R1691 T7777 T7754 parataxis 17,crossed
R1692 T7778 T7777 punct ],17
R1693 T7779 T7754 punct .,crossed
R1694 T7781 T7782 det The,mice
R1695 T7782 T7783 nsubjpass mice,intercrossed
R1696 T7783 T7785 ccomp intercrossed,were
R1697 T7784 T7783 auxpass were,intercrossed
R1698 T7786 T7783 advmod thereafter,intercrossed
R1699 T7787 T7783 prep for,intercrossed
R1700 T7788 T7787 pobj maintenance,for
R1701 T7789 T7785 punct ;,were
R1702 T7790 T7785 advmod hence,were
R1703 T7791 T7785 punct ", ",were
R1704 T7792 T7793 det the,mice
R1705 T7793 T7785 nsubj mice,were
R1706 T7794 T7793 acl used,mice
R1707 T7795 T7794 prep for,used
R1708 T7796 T7795 pobj analysis,for
R1709 T7797 T7785 prep in,were
R1710 T7798 T7799 det a,background
R1711 T7799 T7797 pobj background,in
R1712 T7800 T7799 amod mixed,background
R1713 T7801 T7799 prep of,background
R1714 T7802 T7801 pobj FVB,of
R1715 T7803 T7802 punct ", ",FVB
R1716 T7804 T7805 nummod 129,S
R1717 T7805 T7802 conj S,FVB
R1718 T7806 T7805 punct /,S
R1719 T7807 T7805 punct ", ",S
R1720 T7808 T7805 cc and,S
R1721 T7809 T7805 conj C57BL,S
R1722 T7810 T7809 punct /,C57BL
R1723 T7811 T7809 nummod 6,C57BL
R1724 T7812 T7802 prep in,FVB
R1725 T7813 T7814 amod similar,proportions
R1726 T7814 T7812 pobj proportions,in
R1727 T7815 T7802 punct ", ",FVB
R1728 T7816 T7802 prep with,FVB
R1729 T7817 T7818 amod minimal,contribution
R1730 T7818 T7816 pobj contribution,with
R1731 T7819 T7818 prep of,contribution
R1732 T7820 T7819 pobj SJ,of
R1733 T7821 T7785 punct .,were

2_test

Id Subject Object Predicate Lexical cue
17002498-7638196-85593505 92-94 7638196 denotes 15
17002498-11694875-85593506 159-161 11694875 denotes 16
17002498-15083518-85593507 372-374 15083518 denotes 17
T13682 92-94 7638196 denotes 15
T44814 159-161 11694875 denotes 16
T95436 372-374 15083518 denotes 17