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PMC:149366 / 9328-9909 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1722 74-86 PR:000021998 denotes neurotrophin
T1723 134-150 CL:0000601 denotes outer hair cells
T1724 234-242 UBERON:0006798 denotes efferent
T1725 272-288 CL:0000601 denotes outer hair cells
T1726 292-297 PR:000013043 denotes Brn3c
T1727 443-458 CL:0000601 denotes outer hair cell
T1728 517-532 CL:0000601 denotes outer hair cell
T1729 563-568 PR:000013043 denotes Brn3c

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1827 74-86 PR_EXT:000021998 denotes neurotrophin
T1828 87-91 SO_EXT:sequence_nullness denotes null
T1829 92-98 SO_EXT:sequence_altered_entity denotes mutant
T1830 134-150 CL:0000601 denotes outer hair cells
T1831 145-150 CL_GO_EXT:cell denotes cells
T1832 180-188 SO_EXT:wild_type_entity_or_quality denotes wildtype
T1833 234-242 UBERON:0006798 denotes efferent
T1834 272-288 CL:0000601 denotes outer hair cells
T1835 283-288 CL_GO_EXT:cell denotes cells
T1836 292-297 PR_EXT:000013043 denotes Brn3c
T1837 298-302 SO_EXT:sequence_nullness denotes null
T1838 303-310 SO_EXT:sequence_altered_entity denotes mutants
T1839 443-458 CL:0000601 denotes outer hair cell
T1840 454-458 CL_GO_EXT:cell denotes cell
T1841 517-532 CL:0000601 denotes outer hair cell
T1842 528-532 CL_GO_EXT:cell denotes cell
T1843 563-568 PR_EXT:000013043 denotes Brn3c
T1844 569-573 SO_EXT:sequence_nullness denotes null
T1845 574-580 SO_EXT:sequence_altered_entity denotes mutant

craft-sa-dev

Id Subject Object Predicate Lexical cue
T2354 0-7 RB denotes However
T2355 15-17 VBZ denotes is
T2356 7-9 , denotes ,
T2357 9-14 EX denotes there
T2358 18-21 CD denotes one
T2359 34-44 NN denotes difference
T2360 22-33 JJ denotes qualitative
T2361 45-48 RB denotes not
T2362 49-59 VBN denotes recognized
T2363 60-62 IN denotes in
T2364 63-66 DT denotes any
T2365 92-98 NN denotes mutant
T2366 67-73 JJ denotes single
T2367 74-86 NN denotes neurotrophin
T2368 87-91 JJ denotes null
T2369 98-99 . denotes .
T2370 99-466 sentence denotes Afferents reach all three rows of outer hair cells in the basal turn of control wildtype littermates (Fig. 2c), but both afferent and efferent outgrowth is disorganized to outer hair cells in Brn3c null mutants (Fig. 2d) and does not show any clear organization into three distinct longitudinal fiber bundles paralleling the three rows in the outer hair cell region.
T2371 100-109 NNS denotes Afferents
T2372 110-115 VBP denotes reach
T2373 116-119 DT denotes all
T2374 126-130 NNS denotes rows
T2375 120-125 CD denotes three
T2376 131-133 IN denotes of
T2377 134-139 JJ denotes outer
T2378 145-150 NNS denotes cells
T2379 140-144 NN denotes hair
T2380 151-153 IN denotes in
T2381 154-157 DT denotes the
T2382 164-168 NN denotes turn
T2383 158-163 JJ denotes basal
T2384 169-171 IN denotes of
T2385 172-179 NN denotes control
T2386 189-200 NNS denotes littermates
T2387 180-188 JJ denotes wildtype
T2388 201-202 -LRB- denotes (
T2389 207-209 NN denotes 2c
T2390 202-206 NN denotes Fig.
T2391 209-210 -RRB- denotes )
T2392 210-212 , denotes ,
T2393 212-215 CC denotes but
T2394 216-220 CC denotes both
T2395 221-229 JJ denotes afferent
T2396 243-252 NN denotes outgrowth
T2397 230-233 CC denotes and
T2398 234-242 JJ denotes efferent
T2399 253-255 VBZ denotes is
T2400 256-268 JJ denotes disorganized
T2401 269-271 IN denotes to
T2402 272-277 JJ denotes outer
T2403 283-288 NNS denotes cells
T2404 278-282 NN denotes hair
T2405 289-291 IN denotes in
T2406 292-297 NN denotes Brn3c
T2407 298-302 JJ denotes null
T2408 303-310 NNS denotes mutants
T2409 311-312 -LRB- denotes (
T2410 317-319 NNP denotes 2d
T2411 312-316 NNP denotes Fig.
T2412 319-320 -RRB- denotes )
T2413 321-324 CC denotes and
T2414 325-329 VBZ denotes does
T2415 334-338 VB denotes show
T2416 330-333 RB denotes not
T2417 339-342 DT denotes any
T2418 349-361 NN denotes organization
T2419 343-348 JJ denotes clear
T2420 362-366 IN denotes into
T2421 367-372 CD denotes three
T2422 401-408 NNS denotes bundles
T2423 373-381 JJ denotes distinct
T2424 382-394 JJ denotes longitudinal
T2425 395-400 NN denotes fiber
T2426 409-420 VBG denotes paralleling
T2427 421-424 DT denotes the
T2428 431-435 NNS denotes rows
T2429 425-430 CD denotes three
T2430 436-438 IN denotes in
T2431 439-442 DT denotes the
T2432 459-465 NN denotes region
T2433 443-448 JJ denotes outer
T2434 449-453 NN denotes hair
T2435 454-458 NN denotes cell
T2436 465-466 . denotes .
T2437 466-581 sentence denotes These data suggest that fiber organization in the outer hair cell region is partly disrupted in Brn3c null mutant.
T2438 467-472 DT denotes These
T2439 473-477 NNS denotes data
T2440 478-485 VBP denotes suggest
T2441 486-490 IN denotes that
T2442 550-559 VBN denotes disrupted
T2443 491-496 NN denotes fiber
T2444 497-509 NN denotes organization
T2445 510-512 IN denotes in
T2446 513-516 DT denotes the
T2447 533-539 NN denotes region
T2448 517-522 JJ denotes outer
T2449 523-527 NN denotes hair
T2450 528-532 NN denotes cell
T2451 540-542 VBZ denotes is
T2452 543-549 RB denotes partly
T2453 560-562 IN denotes in
T2454 563-568 NN denotes Brn3c
T2455 569-573 JJ denotes null
T2456 574-580 NN denotes mutant
T2457 580-581 . denotes .
R1470 T2354 T2355 advmod However,is
R1471 T2356 T2355 punct ", ",is
R1472 T2357 T2355 expl there,is
R1473 T2358 T2359 nummod one,difference
R1474 T2359 T2355 attr difference,is
R1475 T2360 T2359 amod qualitative,difference
R1476 T2361 T2362 neg not,recognized
R1477 T2362 T2359 acl recognized,difference
R1478 T2363 T2362 prep in,recognized
R1479 T2364 T2365 det any,mutant
R1480 T2365 T2363 pobj mutant,in
R1481 T2366 T2367 amod single,neurotrophin
R1482 T2367 T2368 npadvmod neurotrophin,null
R1483 T2368 T2365 amod null,mutant
R1484 T2369 T2355 punct .,is
R1485 T2371 T2372 nsubj Afferents,reach
R1486 T2373 T2374 det all,rows
R1487 T2374 T2372 dobj rows,reach
R1488 T2375 T2374 nummod three,rows
R1489 T2376 T2374 prep of,rows
R1490 T2377 T2378 amod outer,cells
R1491 T2378 T2376 pobj cells,of
R1492 T2379 T2378 compound hair,cells
R1493 T2380 T2372 prep in,reach
R1494 T2381 T2382 det the,turn
R1495 T2382 T2380 pobj turn,in
R1496 T2383 T2382 amod basal,turn
R1497 T2384 T2382 prep of,turn
R1498 T2385 T2386 nmod control,littermates
R1499 T2386 T2384 pobj littermates,of
R1500 T2387 T2386 amod wildtype,littermates
R1501 T2388 T2389 punct (,2c
R1502 T2389 T2372 parataxis 2c,reach
R1503 T2390 T2389 compound Fig.,2c
R1504 T2391 T2389 punct ),2c
R1505 T2392 T2372 punct ", ",reach
R1506 T2393 T2372 cc but,reach
R1507 T2394 T2395 preconj both,afferent
R1508 T2395 T2396 amod afferent,outgrowth
R1509 T2396 T2399 nsubj outgrowth,is
R1510 T2397 T2395 cc and,afferent
R1511 T2398 T2395 conj efferent,afferent
R1512 T2399 T2372 conj is,reach
R1513 T2400 T2399 acomp disorganized,is
R1514 T2401 T2400 prep to,disorganized
R1515 T2402 T2403 amod outer,cells
R1516 T2403 T2401 pobj cells,to
R1517 T2404 T2403 compound hair,cells
R1518 T2405 T2399 prep in,is
R1519 T2406 T2407 npadvmod Brn3c,null
R1520 T2407 T2408 amod null,mutants
R1521 T2408 T2405 pobj mutants,in
R1522 T2409 T2410 punct (,2d
R1523 T2410 T2399 parataxis 2d,is
R1524 T2411 T2410 compound Fig.,2d
R1525 T2412 T2410 punct ),2d
R1526 T2413 T2399 cc and,is
R1527 T2414 T2415 aux does,show
R1528 T2415 T2399 conj show,is
R1529 T2416 T2415 neg not,show
R1530 T2417 T2418 det any,organization
R1531 T2418 T2415 dobj organization,show
R1532 T2419 T2418 amod clear,organization
R1533 T2420 T2418 prep into,organization
R1534 T2421 T2422 nummod three,bundles
R1535 T2422 T2420 pobj bundles,into
R1536 T2423 T2422 amod distinct,bundles
R1537 T2424 T2422 amod longitudinal,bundles
R1538 T2425 T2422 compound fiber,bundles
R1539 T2426 T2422 acl paralleling,bundles
R1540 T2427 T2428 det the,rows
R1541 T2428 T2426 dobj rows,paralleling
R1542 T2429 T2428 nummod three,rows
R1543 T2430 T2428 prep in,rows
R1544 T2431 T2432 det the,region
R1545 T2432 T2430 pobj region,in
R1546 T2433 T2432 amod outer,region
R1547 T2434 T2435 compound hair,cell
R1548 T2435 T2432 compound cell,region
R1549 T2436 T2399 punct .,is
R1550 T2438 T2439 det These,data
R1551 T2439 T2440 nsubj data,suggest
R1552 T2441 T2442 mark that,disrupted
R1553 T2442 T2440 ccomp disrupted,suggest
R1554 T2443 T2444 compound fiber,organization
R1555 T2444 T2442 nsubjpass organization,disrupted
R1556 T2445 T2444 prep in,organization
R1557 T2446 T2447 det the,region
R1558 T2447 T2445 pobj region,in
R1559 T2448 T2447 amod outer,region
R1560 T2449 T2450 compound hair,cell
R1561 T2450 T2447 compound cell,region
R1562 T2451 T2442 auxpass is,disrupted
R1563 T2452 T2442 advmod partly,disrupted
R1564 T2453 T2442 prep in,disrupted
R1565 T2454 T2455 npadvmod Brn3c,null
R1566 T2455 T2456 amod null,mutant
R1567 T2456 T2453 pobj mutant,in
R1568 T2457 T2440 punct .,suggest