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PMC:149350 / 9706-10640 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2562 9-17 CHEBI:10545 denotes electron
T2563 125-139 CHEBI:64276 denotes glutaraldehyde
T2564 155-172 CHEBI:62956 denotes sodium cacodylate
T2565 259-264 CHEBI:15377 denotes water
T2566 291-298 CHEBI:15377 denotes aqueous
T2567 376-383 CHEBI:16236 denotes ethanol
T2568 436-443 CHEBI:16236 denotes ethanol
T2569 479-493 CHEBI:16526 denotes carbon dioxide
T2570 735-743 CHEBI:10545 denotes electron

craft-sa-dev

Id Subject Object Predicate Lexical cue
T2588 0-8 NN denotes Scanning
T2589 18-28 NN denotes microscopy
T2590 9-17 NN denotes electron
T2591 28-204 sentence denotes Lenses bisected along the optical axes were immersion fixed in 2% (w/v) paraformaldehyde and 2% glutaraldehyde (v/v) in 0.1 M sodium cacodylate buffer pH 7.2 at RT for 24 hrs.
T2592 29-35 NNS denotes Lenses
T2593 83-88 VBN denotes fixed
T2594 36-44 VBN denotes bisected
T2595 45-50 IN denotes along
T2596 51-54 DT denotes the
T2597 63-67 NNS denotes axes
T2598 55-62 JJ denotes optical
T2599 68-72 VBD denotes were
T2600 73-82 NN denotes immersion
T2601 89-91 IN denotes in
T2602 92-93 CD denotes 2
T2603 93-94 NN denotes %
T2604 101-117 NN denotes paraformaldehyde
T2605 95-96 -LRB- denotes (
T2606 96-97 NN denotes w
T2607 97-98 SYM denotes /
T2608 98-99 NN denotes v
T2609 99-100 -RRB- denotes )
T2610 118-121 CC denotes and
T2611 122-123 CD denotes 2
T2612 123-124 NN denotes %
T2613 125-139 NN denotes glutaraldehyde
T2614 140-141 -LRB- denotes (
T2615 141-142 NN denotes v
T2616 142-143 SYM denotes /
T2617 143-144 NN denotes v
T2618 144-145 -RRB- denotes )
T2619 146-148 IN denotes in
T2620 149-152 CD denotes 0.1
T2621 153-154 NN denotes M
T2622 162-172 NN denotes cacodylate
T2623 155-161 NN denotes sodium
T2624 173-179 NN denotes buffer
T2625 180-182 NN denotes pH
T2626 183-186 CD denotes 7.2
T2627 187-189 IN denotes at
T2628 190-192 NN denotes RT
T2629 193-196 IN denotes for
T2630 197-199 CD denotes 24
T2631 200-203 NNS denotes hrs
T2632 203-204 . denotes .
T2633 204-331 sentence denotes Samples were then washed several times with distilled water and postfixed in 1% (v/v) aqueous osmium tetroxide at RT for 1 hr.
T2634 205-212 NNS denotes Samples
T2635 223-229 VBN denotes washed
T2636 213-217 VBD denotes were
T2637 218-222 RB denotes then
T2638 230-237 JJ denotes several
T2639 238-243 NNS denotes times
T2640 244-248 IN denotes with
T2641 249-258 JJ denotes distilled
T2642 259-264 NN denotes water
T2643 265-268 CC denotes and
T2644 269-278 VBN denotes postfixed
T2645 279-281 IN denotes in
T2646 282-283 CD denotes 1
T2647 283-284 NN denotes %
T2648 306-315 NN denotes tetroxide
T2649 285-286 -LRB- denotes (
T2650 286-287 NN denotes v
T2651 287-288 SYM denotes /
T2652 288-289 NN denotes v
T2653 289-290 -RRB- denotes )
T2654 291-298 JJ denotes aqueous
T2655 299-305 NN denotes osmium
T2656 316-318 IN denotes at
T2657 319-321 NN denotes RT
T2658 322-325 IN denotes for
T2659 326-327 CD denotes 1
T2660 328-330 NN denotes hr
T2661 330-331 . denotes .
T2662 331-405 sentence denotes Lens halves were dehydrated in an ascending ethanol series from 50–100 %.
T2663 332-336 NNP denotes Lens
T2664 337-343 NNS denotes halves
T2665 349-359 VBN denotes dehydrated
T2666 344-348 VBD denotes were
T2667 360-362 IN denotes in
T2668 363-365 DT denotes an
T2669 384-390 NN denotes series
T2670 366-375 VBG denotes ascending
T2671 376-383 NN denotes ethanol
T2672 391-395 IN denotes from
T2673 396-398 CD denotes 50
T2674 399-402 CD denotes 100
T2675 398-399 SYM denotes –
T2676 403-404 NN denotes %
T2677 404-405 . denotes .
T2678 405-552 sentence denotes Once lens halves were in 100% ethanol, they were critical point dried in carbon dioxide in a Samdri-790B (Tousimis Research Corp., Rockville, MD).
T2679 406-410 IN denotes Once
T2680 423-427 VBD denotes were
T2681 411-415 NN denotes lens
T2682 416-422 NNS denotes halves
T2683 470-475 VBN denotes dried
T2684 428-430 IN denotes in
T2685 431-434 CD denotes 100
T2686 434-435 NN denotes %
T2687 436-443 NN denotes ethanol
T2688 443-445 , denotes ,
T2689 445-449 PRP denotes they
T2690 450-454 VBD denotes were
T2691 455-463 JJ denotes critical
T2692 464-469 NN denotes point
T2693 476-478 IN denotes in
T2694 479-485 NN denotes carbon
T2695 486-493 NN denotes dioxide
T2696 494-496 IN denotes in
T2697 497-498 DT denotes a
T2698 506-510 NN denotes 790B
T2699 499-505 NN denotes Samdri
T2700 505-506 HYPH denotes -
T2701 511-512 -LRB- denotes (
T2702 530-535 NNP denotes Corp.
T2703 512-520 NNP denotes Tousimis
T2704 521-529 NNP denotes Research
T2705 535-537 , denotes ,
T2706 537-546 NNP denotes Rockville
T2707 546-548 , denotes ,
T2708 548-550 NNP denotes MD
T2709 550-551 -RRB- denotes )
T2710 551-552 . denotes .
T2711 552-640 sentence denotes Critical point dried lens halves were secured on aluminum stubs with double sided tape.
T2712 553-561 JJ denotes Critical
T2713 562-567 NN denotes point
T2714 568-573 VBN denotes dried
T2715 579-585 NNS denotes halves
T2716 574-578 NN denotes lens
T2717 591-598 VBN denotes secured
T2718 586-590 VBD denotes were
T2719 599-601 IN denotes on
T2720 602-610 NN denotes aluminum
T2721 611-616 NNS denotes stubs
T2722 617-621 IN denotes with
T2723 622-628 NN denotes double
T2724 629-634 VBN denotes sided
T2725 635-639 NN denotes tape
T2726 639-640 . denotes .
T2727 640-780 sentence denotes Mounted specimens were then sputter coated with gold and viewed on a Hitachi S-3500N scanning electron microscope (Tokyo, Japan) at 1–5 kV.
T2728 641-648 VBN denotes Mounted
T2729 649-658 NNS denotes specimens
T2730 677-683 VBN denotes coated
T2731 659-663 VBD denotes were
T2732 664-668 RB denotes then
T2733 669-676 NN denotes sputter
T2734 684-688 IN denotes with
T2735 689-693 NN denotes gold
T2736 694-697 CC denotes and
T2737 698-704 VBN denotes viewed
T2738 705-707 IN denotes on
T2739 708-709 DT denotes a
T2740 744-754 NN denotes microscope
T2741 710-717 NNP denotes Hitachi
T2742 720-725 NN denotes 3500N
T2743 718-719 NN denotes S
T2744 719-720 HYPH denotes -
T2745 726-734 NN denotes scanning
T2746 735-743 NN denotes electron
T2747 755-756 -LRB- denotes (
T2748 756-761 NNP denotes Tokyo
T2749 761-763 , denotes ,
T2750 763-768 NNP denotes Japan
T2751 768-769 -RRB- denotes )
T2752 770-772 IN denotes at
T2753 773-774 CD denotes 1
T2754 775-776 CD denotes 5
T2755 774-775 SYM denotes –
T2756 777-779 NN denotes kV
T2757 779-780 . denotes .
T2758 780-934 sentence denotes This microscope is equipped with Hitachi's patented "Dual-Bias" which allows extremely high emission currents at acceleration voltages of 5 kV and lower.
T2759 781-785 DT denotes This
T2760 786-796 NN denotes microscope
T2761 800-808 VBN denotes equipped
T2762 797-799 VBZ denotes is
T2763 809-813 IN denotes with
T2764 814-821 NNP denotes Hitachi
T2765 839-843 NNP denotes Bias
T2766 821-823 POS denotes 's
T2767 824-832 VBN denotes patented
T2768 833-834 `` denotes "
T2769 834-838 NNP denotes Dual
T2770 838-839 HYPH denotes -
T2771 843-844 '' denotes "
T2772 845-850 WDT denotes which
T2773 851-857 VBZ denotes allows
T2774 858-867 RB denotes extremely
T2775 868-872 JJ denotes high
T2776 882-890 NNS denotes currents
T2777 873-881 NN denotes emission
T2778 891-893 IN denotes at
T2779 894-906 NN denotes acceleration
T2780 907-915 NNS denotes voltages
T2781 916-918 IN denotes of
T2782 919-920 CD denotes 5
T2783 921-923 NN denotes kV
T2784 924-927 CC denotes and
T2785 928-933 JJR denotes lower
T2786 933-934 . denotes .
R1787 T2588 T2589 compound Scanning,microscopy
R1788 T2590 T2589 compound electron,microscopy
R1789 T2592 T2593 nsubjpass Lenses,fixed
R1790 T2594 T2592 acl bisected,Lenses
R1791 T2595 T2594 prep along,bisected
R1792 T2596 T2597 det the,axes
R1793 T2597 T2595 pobj axes,along
R1794 T2598 T2597 amod optical,axes
R1795 T2599 T2593 auxpass were,fixed
R1796 T2600 T2593 dep immersion,fixed
R1797 T2601 T2593 prep in,fixed
R1798 T2602 T2603 nummod 2,%
R1799 T2603 T2604 nmod %,paraformaldehyde
R1800 T2604 T2601 pobj paraformaldehyde,in
R1801 T2605 T2606 punct (,w
R1802 T2606 T2603 parataxis w,%
R1803 T2607 T2608 punct /,v
R1804 T2608 T2606 prep v,w
R1805 T2609 T2606 punct ),w
R1806 T2610 T2604 cc and,paraformaldehyde
R1807 T2611 T2612 nummod 2,%
R1808 T2612 T2613 compound %,glutaraldehyde
R1809 T2613 T2604 conj glutaraldehyde,paraformaldehyde
R1810 T2614 T2615 punct (,v
R1811 T2615 T2613 parataxis v,glutaraldehyde
R1812 T2616 T2617 punct /,v
R1813 T2617 T2615 prep v,v
R1814 T2618 T2615 punct ),v
R1815 T2619 T2604 prep in,paraformaldehyde
R1816 T2620 T2621 nummod 0.1,M
R1817 T2621 T2622 compound M,cacodylate
R1818 T2622 T2624 compound cacodylate,buffer
R1819 T2623 T2622 compound sodium,cacodylate
R1820 T2624 T2619 pobj buffer,in
R1821 T2625 T2624 npadvmod pH,buffer
R1822 T2626 T2625 nummod 7.2,pH
R1823 T2627 T2593 prep at,fixed
R1824 T2628 T2627 pobj RT,at
R1825 T2629 T2593 prep for,fixed
R1826 T2630 T2631 nummod 24,hrs
R1827 T2631 T2629 pobj hrs,for
R1828 T2632 T2593 punct .,fixed
R1829 T2634 T2635 nsubjpass Samples,washed
R1830 T2636 T2635 auxpass were,washed
R1831 T2637 T2635 advmod then,washed
R1832 T2638 T2639 amod several,times
R1833 T2639 T2635 npadvmod times,washed
R1834 T2640 T2635 prep with,washed
R1835 T2641 T2642 amod distilled,water
R1836 T2642 T2640 pobj water,with
R1837 T2643 T2635 cc and,washed
R1838 T2644 T2635 conj postfixed,washed
R1839 T2645 T2644 prep in,postfixed
R1840 T2646 T2647 nummod 1,%
R1841 T2647 T2648 nmod %,tetroxide
R1842 T2648 T2645 pobj tetroxide,in
R1843 T2649 T2650 punct (,v
R1844 T2650 T2648 parataxis v,tetroxide
R1845 T2651 T2652 punct /,v
R1846 T2652 T2650 prep v,v
R1847 T2653 T2650 punct ),v
R1848 T2654 T2648 amod aqueous,tetroxide
R1849 T2655 T2648 compound osmium,tetroxide
R1850 T2656 T2644 prep at,postfixed
R1851 T2657 T2656 pobj RT,at
R1852 T2658 T2644 prep for,postfixed
R1853 T2659 T2660 nummod 1,hr
R1854 T2660 T2658 pobj hr,for
R1855 T2661 T2635 punct .,washed
R1856 T2663 T2664 compound Lens,halves
R1857 T2664 T2665 nsubjpass halves,dehydrated
R1858 T2666 T2665 auxpass were,dehydrated
R1859 T2667 T2665 prep in,dehydrated
R1860 T2668 T2669 det an,series
R1861 T2669 T2667 pobj series,in
R1862 T2670 T2669 amod ascending,series
R1863 T2671 T2669 compound ethanol,series
R1864 T2672 T2669 prep from,series
R1865 T2673 T2674 quantmod 50,100
R1866 T2674 T2676 nummod 100,%
R1867 T2675 T2674 punct –,100
R1868 T2676 T2672 pobj %,from
R1869 T2677 T2665 punct .,dehydrated
R1870 T2679 T2680 mark Once,were
R1871 T2680 T2683 advcl were,dried
R1872 T2681 T2682 compound lens,halves
R1873 T2682 T2680 nsubj halves,were
R1874 T2684 T2680 prep in,were
R1875 T2685 T2686 nummod 100,%
R1876 T2686 T2687 compound %,ethanol
R1877 T2687 T2684 pobj ethanol,in
R1878 T2688 T2683 punct ", ",dried
R1879 T2689 T2683 nsubjpass they,dried
R1880 T2690 T2683 auxpass were,dried
R1881 T2691 T2692 amod critical,point
R1882 T2692 T2683 npadvmod point,dried
R1883 T2693 T2683 prep in,dried
R1884 T2694 T2695 compound carbon,dioxide
R1885 T2695 T2693 pobj dioxide,in
R1886 T2696 T2683 prep in,dried
R1887 T2697 T2698 det a,790B
R1888 T2698 T2696 pobj 790B,in
R1889 T2699 T2698 compound Samdri,790B
R1890 T2700 T2698 punct -,790B
R1891 T2701 T2702 punct (,Corp.
R1892 T2702 T2698 parataxis Corp.,790B
R1893 T2703 T2702 compound Tousimis,Corp.
R1894 T2704 T2702 compound Research,Corp.
R1895 T2705 T2702 punct ", ",Corp.
R1896 T2706 T2702 npadvmod Rockville,Corp.
R1897 T2707 T2702 punct ", ",Corp.
R1898 T2708 T2702 npadvmod MD,Corp.
R1899 T2709 T2702 punct ),Corp.
R1900 T2710 T2683 punct .,dried
R1901 T2712 T2713 amod Critical,point
R1902 T2713 T2714 npadvmod point,dried
R1903 T2714 T2715 amod dried,halves
R1904 T2715 T2717 nsubjpass halves,secured
R1905 T2716 T2715 compound lens,halves
R1906 T2718 T2717 auxpass were,secured
R1907 T2719 T2717 prep on,secured
R1908 T2720 T2721 compound aluminum,stubs
R1909 T2721 T2719 pobj stubs,on
R1910 T2722 T2717 prep with,secured
R1911 T2723 T2724 npadvmod double,sided
R1912 T2724 T2725 amod sided,tape
R1913 T2725 T2722 pobj tape,with
R1914 T2726 T2717 punct .,secured
R1915 T2728 T2729 amod Mounted,specimens
R1916 T2729 T2730 nsubjpass specimens,coated
R1917 T2731 T2730 auxpass were,coated
R1918 T2732 T2730 advmod then,coated
R1919 T2733 T2730 dep sputter,coated
R1920 T2734 T2730 prep with,coated
R1921 T2735 T2734 pobj gold,with
R1922 T2736 T2730 cc and,coated
R1923 T2737 T2730 conj viewed,coated
R1924 T2738 T2737 prep on,viewed
R1925 T2739 T2740 det a,microscope
R1926 T2740 T2738 pobj microscope,on
R1927 T2741 T2742 compound Hitachi,3500N
R1928 T2742 T2740 compound 3500N,microscope
R1929 T2743 T2742 compound S,3500N
R1930 T2744 T2742 punct -,3500N
R1931 T2745 T2740 compound scanning,microscope
R1932 T2746 T2740 compound electron,microscope
R1933 T2747 T2748 punct (,Tokyo
R1934 T2748 T2740 parataxis Tokyo,microscope
R1935 T2749 T2748 punct ", ",Tokyo
R1936 T2750 T2748 npadvmod Japan,Tokyo
R1937 T2751 T2748 punct ),Tokyo
R1938 T2752 T2737 prep at,viewed
R1939 T2753 T2754 quantmod 1,5
R1940 T2754 T2756 nummod 5,kV
R1941 T2755 T2754 punct –,5
R1942 T2756 T2752 pobj kV,at
R1943 T2757 T2730 punct .,coated
R1944 T2759 T2760 det This,microscope
R1945 T2760 T2761 nsubjpass microscope,equipped
R1946 T2762 T2761 auxpass is,equipped
R1947 T2763 T2761 prep with,equipped
R1948 T2764 T2765 poss Hitachi,Bias
R1949 T2765 T2763 pobj Bias,with
R1950 T2766 T2764 case 's,Hitachi
R1951 T2767 T2765 amod patented,Bias
R1952 T2768 T2765 punct """",Bias
R1953 T2769 T2765 compound Dual,Bias
R1954 T2770 T2765 punct -,Bias
R1955 T2771 T2765 punct """",Bias
R1956 T2772 T2773 dep which,allows
R1957 T2773 T2765 relcl allows,Bias
R1958 T2774 T2775 advmod extremely,high
R1959 T2775 T2776 amod high,currents
R1960 T2776 T2773 dobj currents,allows
R1961 T2777 T2776 compound emission,currents
R1962 T2778 T2773 prep at,allows
R1963 T2779 T2780 compound acceleration,voltages
R1964 T2780 T2778 pobj voltages,at
R1965 T2781 T2780 prep of,voltages
R1966 T2782 T2783 nummod 5,kV
R1967 T2783 T2781 pobj kV,of
R1968 T2784 T2783 cc and,kV
R1969 T2785 T2783 conj lower,kV
R1970 T2786 T2761 punct .,equipped

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2571 9-17 CHEBI:10545 denotes electron
T2572 29-35 UBERON_EXT:lens denotes Lenses
T2573 101-117 CHEBI_EXT:paraformaldehye denotes paraformaldehyde
T2574 125-139 CHEBI:64276 denotes glutaraldehyde
T2575 155-172 CHEBI:62956 denotes sodium cacodylate
T2576 173-179 CHEBI_CHMO_EXT:buffer_solution denotes buffer
T2577 259-264 CHEBI:15377 denotes water
T2578 291-298 CHEBI:15377 denotes aqueous
T2579 332-336 UBERON_EXT:lens denotes Lens
T2580 376-383 CHEBI:16236 denotes ethanol
T2581 411-415 UBERON_EXT:lens denotes lens
T2582 436-443 CHEBI:16236 denotes ethanol
T2583 479-493 CHEBI:16526 denotes carbon dioxide
T2584 574-578 UBERON_EXT:lens denotes lens
T2585 602-610 CHEBI_EXT:aluminium denotes aluminum
T2586 689-693 CHEBI_EXT:gold denotes gold
T2587 735-743 CHEBI:10545 denotes electron