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PMC:1482699 / 2773-3569 JSONTXT

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Id Subject Object Predicate Lexical cue
T2920 0-13 RB denotes Traditionally
T2921 36-45 VBN denotes developed
T2922 13-15 , denotes ,
T2923 15-23 JJ denotes congenic
T2924 24-31 NNS denotes strains
T2925 32-35 VBP denotes are
T2926 46-48 IN denotes by
T2927 49-62 VBG denotes introgressing
T2928 63-66 NN denotes QTL
T2929 67-74 NNS denotes alleles
T2930 75-79 IN denotes from
T2931 80-81 DT denotes a
T2932 88-94 NN denotes strain
T2933 82-87 NN denotes donor
T2934 94-96 , denotes ,
T2935 96-101 WP$ denotes whose
T2936 102-112 NNS denotes boundaries
T2937 117-124 VBN denotes defined
T2938 113-116 VBP denotes are
T2939 125-127 IN denotes by
T2940 128-135 JJ denotes genetic
T2941 136-143 NNS denotes markers
T2942 143-145 , denotes ,
T2943 145-147 IN denotes on
T2944 148-151 DT denotes the
T2945 160-170 NN denotes background
T2946 152-159 JJ denotes genetic
T2947 171-173 IN denotes of
T2948 174-175 DT denotes a
T2949 186-192 NN denotes strain
T2950 176-185 NN denotes recipient
T2951 193-196 IN denotes via
T2952 197-199 CD denotes 10
T2953 200-211 NNS denotes backcrosses
T2954 212-213 -LRB- denotes [
T2955 213-214 CD denotes 4
T2956 214-215 -RRB- denotes ]
T2957 215-216 . denotes .
T2958 216-338 sentence denotes While technically straightforward this is a time consuming endeavor taking over three years to construct a single strain.
T2959 217-222 IN denotes While
T2960 235-250 JJ denotes straightforward
T2961 223-234 RB denotes technically
T2962 256-258 VBZ denotes is
T2963 251-255 NN denotes this
T2964 259-260 DT denotes a
T2965 276-284 NN denotes endeavor
T2966 261-265 NN denotes time
T2967 266-275 VBG denotes consuming
T2968 285-291 VBG denotes taking
T2969 292-296 IN denotes over
T2970 297-302 CD denotes three
T2971 303-308 NNS denotes years
T2972 309-311 TO denotes to
T2973 312-321 VB denotes construct
T2974 322-323 DT denotes a
T2975 331-337 NN denotes strain
T2976 324-330 JJ denotes single
T2977 337-338 . denotes .
T2978 338-481 sentence denotes The speed congenic approach is an alternative to this lengthy process and can reduce the number of required backcrosses from 10 to five [5,6].
T2979 339-342 DT denotes The
T2980 358-366 NN denotes approach
T2981 343-348 NN denotes speed
T2982 349-357 JJ denotes congenic
T2983 367-369 VBZ denotes is
T2984 370-372 DT denotes an
T2985 373-384 NN denotes alternative
T2986 385-387 IN denotes to
T2987 388-392 DT denotes this
T2988 401-408 NN denotes process
T2989 393-400 JJ denotes lengthy
T2990 409-412 CC denotes and
T2991 413-416 MD denotes can
T2992 417-423 VB denotes reduce
T2993 424-427 DT denotes the
T2994 428-434 NN denotes number
T2995 435-437 IN denotes of
T2996 438-446 VBN denotes required
T2997 447-458 NNS denotes backcrosses
T2998 459-463 IN denotes from
T2999 464-466 CD denotes 10
T3000 467-469 IN denotes to
T3001 470-474 CD denotes five
T3002 475-476 -LRB- denotes [
T3003 478-479 CD denotes 6
T3004 476-477 CD denotes 5
T3005 477-478 , denotes ,
T3006 479-480 -RRB- denotes ]
T3007 480-481 . denotes .
T3008 481-629 sentence denotes This strategy uses marker-assisted selection to identify male mice inheriting fewer donor alleles, than expected on average, during each backcross.
T3009 482-486 DT denotes This
T3010 487-495 NN denotes strategy
T3011 496-500 VBZ denotes uses
T3012 501-507 NN denotes marker
T3013 508-516 VBN denotes assisted
T3014 507-508 HYPH denotes -
T3015 517-526 NN denotes selection
T3016 527-529 TO denotes to
T3017 530-538 VB denotes identify
T3018 539-543 JJ denotes male
T3019 544-548 NNS denotes mice
T3020 549-559 VBG denotes inheriting
T3021 560-565 JJR denotes fewer
T3022 572-579 NNS denotes alleles
T3023 566-571 NN denotes donor
T3024 579-581 , denotes ,
T3025 581-585 IN denotes than
T3026 586-594 VBN denotes expected
T3027 595-597 IN denotes on
T3028 598-605 JJ denotes average
T3029 605-607 , denotes ,
T3030 607-613 IN denotes during
T3031 614-618 DT denotes each
T3032 619-628 NN denotes backcross
T3033 628-629 . denotes .
T3034 629-796 sentence denotes Numerous traditionally developed and speed congenics have been used to successfully isolate mouse QTL for a wide array of traits, including growth and obesity [7-13].
T3035 630-638 JJ denotes Numerous
T3036 673-682 NNS denotes congenics
T3037 639-652 RB denotes traditionally
T3038 653-662 VBN denotes developed
T3039 663-666 CC denotes and
T3040 667-672 NN denotes speed
T3041 693-697 VBN denotes used
T3042 683-687 VBP denotes have
T3043 688-692 VBN denotes been
T3044 698-700 TO denotes to
T3045 714-721 VB denotes isolate
T3046 701-713 RB denotes successfully
T3047 722-727 NN denotes mouse
T3048 728-731 NN denotes QTL
T3049 732-735 IN denotes for
T3050 736-737 DT denotes a
T3051 743-748 NN denotes array
T3052 738-742 JJ denotes wide
T3053 749-751 IN denotes of
T3054 752-758 NNS denotes traits
T3055 758-760 , denotes ,
T3056 760-769 VBG denotes including
T3057 770-776 NN denotes growth
T3058 777-780 CC denotes and
T3059 781-788 NN denotes obesity
T3060 789-790 -LRB- denotes [
T3061 790-791 CD denotes 7
T3062 791-792 SYM denotes -
T3063 792-794 CD denotes 13
T3064 794-795 -RRB- denotes ]
T3065 795-796 . denotes .
R421 T2920 T2921 advmod Traditionally,developed
R423 T2922 T2921 punct ", ",developed
R424 T2923 T2924 amod congenic,strains
R426 T2924 T2921 nsubjpass strains,developed
R427 T2925 T2921 auxpass are,developed
R429 T2926 T2921 prep by,developed
R430 T2927 T2926 pcomp introgressing,by
R431 T2928 T2929 compound QTL,alleles
R432 T2929 T2927 dobj alleles,introgressing
R434 T2930 T2929 prep from,alleles
R435 T2931 T2932 det a,strain
R436 T2932 T2930 pobj strain,from
R437 T2933 T2932 compound donor,strain
R438 T2934 T2932 punct ", ",strain
R440 T2935 T2936 poss whose,boundaries
R441 T2936 T2937 dep boundaries,defined
R443 T2937 T2932 relcl defined,strain
R445 T2938 T2937 auxpass are,defined
R446 T2939 T2937 agent by,defined
R447 T2940 T2941 amod genetic,markers
R449 T2941 T2939 pobj markers,by
R450 T2942 T2927 punct ", ",introgressing
R451 T2943 T2927 prep on,introgressing
R453 T2944 T2945 det the,background
R454 T2945 T2943 pobj background,on
R455 T2946 T2945 amod genetic,background
R457 T2947 T2945 prep of,background
R458 T2948 T2949 det a,strain
R459 T2949 T2947 pobj strain,of
R461 T2950 T2949 compound recipient,strain
R462 T2951 T2927 prep via,introgressing
R464 T2952 T2953 nummod 10,backcrosses
R465 T2953 T2951 pobj backcrosses,via
R466 T2954 T2955 punct [,4
R467 T2955 T2927 parataxis 4,introgressing
R468 T2956 T2955 punct ],4
R470 T2957 T2921 punct .,developed
R471 T2959 T2960 mark While,straightforward
R472 T2960 T2962 advcl straightforward,is
R474 T2961 T2960 advmod technically,straightforward
R475 T2963 T2962 nsubj this,is
R477 T2964 T2965 det a,endeavor
R478 T2965 T2962 attr endeavor,is
R479 T2966 T2967 npadvmod time,consuming
R481 T2967 T2965 amod consuming,endeavor
R482 T2968 T2965 acl taking,endeavor
R483 T2969 T2970 quantmod over,three
R485 T2970 T2971 nummod three,years
R486 T2971 T2968 dobj years,taking
R487 T2972 T2973 aux to,construct
R488 T2973 T2968 advcl construct,taking
R489 T2974 T2975 det a,strain
R490 T2975 T2973 dobj strain,construct
R492 T2976 T2975 amod single,strain
R493 T2977 T2962 punct .,is
R495 T2979 T2980 det The,approach
R496 T2980 T2983 nsubj approach,is
R498 T2981 T2982 npadvmod speed,congenic
R499 T2982 T2980 amod congenic,approach
R500 T2984 T2985 det an,alternative
R502 T2985 T2983 attr alternative,is
R503 T2986 T2985 prep to,alternative
R505 T2987 T2988 det this,process
R506 T2988 T2986 pobj process,to
R507 T2989 T2988 amod lengthy,process
R509 T2990 T2983 cc and,is
R510 T2991 T2992 aux can,reduce
R511 T2992 T2983 conj reduce,is
R512 T2993 T2994 det the,number
R514 T2994 T2992 dobj number,reduce
R515 T2995 T2994 prep of,number
R517 T2996 T2997 amod required,backcrosses
R518 T2997 T2995 pobj backcrosses,of
R519 T2998 T2992 prep from,reduce
R521 T2999 T2998 pobj 10,from
R522 T3000 T2992 prep to,reduce
R523 T3001 T3000 pobj five,to
R525 T3002 T3003 punct [,6
R526 T3003 T2992 parataxis 6,reduce
R527 T3004 T3003 nummod 5,6
R529 T3005 T3003 punct ",",6
R530 T3006 T3003 punct ],6
R531 T3007 T2983 punct .,is
R535 T3009 T3010 det This,strategy
R537 T3010 T3011 nsubj strategy,uses
R538 T3012 T3013 npadvmod marker,assisted
R539 T3013 T3015 amod assisted,selection
R540 T3014 T3013 punct -,assisted
R541 T3015 T3011 dobj selection,uses
R543 T3016 T3017 aux to,identify
R544 T3017 T3011 advcl identify,uses
R545 T3018 T3019 amod male,mice
R547 T3019 T3017 dobj mice,identify
R549 T3020 T3019 acl inheriting,mice
R550 T3021 T3022 amod fewer,alleles
R553 T3022 T3020 dobj alleles,inheriting
R554 T3023 T3022 compound donor,alleles
R556 T3024 T3022 punct ", ",alleles
R557 T3025 T3026 mark than,expected
R558 T3026 T3022 advcl expected,alleles
R560 T3027 T3020 prep on,inheriting
R561 T3028 T3027 amod average,on
R562 T3029 T3011 punct ", ",uses
R564 T3030 T3011 prep during,uses
R565 T3031 T3032 det each,backcross
R567 T3032 T3030 pobj backcross,during
R568 T3033 T3011 punct .,uses
R570 T3035 T3036 amod Numerous,congenics
R571 T3036 T3041 nsubjpass congenics,used
R572 T3037 T3038 advmod traditionally,developed
R574 T3038 T3036 amod developed,congenics
R575 T3039 T3038 cc and,developed
R576 T3040 T3038 conj speed,developed
R578 T3042 T3041 aux have,used
R579 T3043 T3041 auxpass been,used
R581 T3044 T3045 aux to,isolate
R582 T3045 T3041 advcl isolate,used
R583 T3046 T3045 advmod successfully,isolate
R584 T3047 T3048 compound mouse,QTL
R586 T3048 T3045 dobj QTL,isolate
R587 T3049 T3045 prep for,isolate
R590 T3051 T3049 pobj array,for
R591 T3052 T3051 amod wide,array
R596 T3056 T3051 prep including,array
R597 T3057 T3056 pobj growth,including
R598 T3058 T3057 cc and,growth
R599 T3059 T3057 conj obesity,growth
R601 T3060 T3061 punct [,7
R602 T3061 T3041 parataxis 7,used
R603 T3062 T3063 punct -,13
R605 T3063 T3061 prep 13,7
R606 T3064 T3061 punct ],7
R607 T3065 T3041 punct .,used
R589 T3050 T3051 det a,array
R592 T3053 T3051 prep of,array
R593 T3054 T3053 pobj traits,of
R594 T3055 T3051 punct ", ",array

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2644 63-66 SO_EXT:0000771 denotes QTL
T2645 67-74 SO_EXT:0001023 denotes alleles
T2646 128-143 SO_EXT:0001645 denotes genetic markers
T2647 136-143 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes markers
T2648 152-159 SO_EXT:0000704 denotes genetic
T2649 501-507 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker
T2650 539-543 PATO_UBERON_EXT:male_or_bearer_of_maleness denotes male
T2651 544-548 NCBITaxon:10088 denotes mice
T2652 572-579 SO_EXT:0001023 denotes alleles
T2653 722-727 NCBITaxon:10088 denotes mouse
T2654 728-731 SO_EXT:0000771 denotes QTL
T2655 770-776 GO_EXT:biological_growth_entity_or_process denotes growth

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2574 63-66 SO:0000771 denotes QTL
T2575 67-74 SO:0001023 denotes alleles
T2576 128-143 SO:0001645 denotes genetic markers
T2577 152-159 SO:0000704 denotes genetic
T2578 544-548 NCBITaxon:10088 denotes mice
T2579 572-579 SO:0001023 denotes alleles
T2580 722-727 NCBITaxon:10088 denotes mouse
T2581 728-731 SO:0000771 denotes QTL