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PMC:1472690 / 9010-9271 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T21659 259-260 -RRB- denotes )
T21658 258-259 CD denotes 1
T21657 252-257 JJ denotes Table
T21656 251-252 -LRB- denotes (
T21655 241-250 NN denotes promoters
T21654 236-240 NN denotes gene
T21653 231-235 NN denotes IL-8
T21652 227-230 CC denotes and
T21651 222-226 NN denotes IL-6
T21650 220-221 -COMMA- denotes ,
T21649 216-220 NN denotes TNFα
T21648 214-215 -COMMA- denotes ,
T21647 210-214 NN denotes IFNγ
T21646 206-209 DT denotes the
T21645 203-205 TO denotes to
T21644 189-202 VB denotes corresponding
T21643 183-188 NN denotes probe
T21642 167-182 NN denotes oligonucleotide
T21641 157-166 NN denotes NFκB-IL-8
T21640 154-156 CC denotes or
T21639 147-153 NN denotes NFIL-6
T21638 145-146 -COMMA- denotes ,
T21637 141-145 NN denotes NFκB
T21636 139-140 -COMMA- denotes ,
T21635 135-139 NN denotes NFAT
T21634 123-134 JJ denotes 32P-labeled
T21633 121-122 DT denotes a
T21632 116-120 IN denotes with
T21631 106-115 VB denotes incubated
T21630 101-105 VB denotes were
T21629 92-100 NN denotes extracts
T21628 84-91 NNP denotes Nuclear
T21627 78-83 NNP denotes 37°C.
T21626 75-77 IN denotes at
T21625 73-74 NN denotes h
T21624 71-72 CD denotes 1
T21623 67-70 IN denotes for
T21622 65-66 -RRB- denotes )
T21621 63-65 NN denotes μg
T21620 59-62 CD denotes 100
T21619 55-58 CC denotes and
T21618 53-54 CD denotes 1
T21617 52-53 -LRB- denotes (
T21616 49-51 NN denotes GP
T21615 46-48 CC denotes or
T21614 38-45 NN denotes control
T21613 31-37 NN denotes medium
T21612 26-30 IN denotes with
T21611 16-25 VB denotes incubated
T21610 11-15 VB denotes were
T21609 6-10 NN denotes PBMC
T21608 0-5 JJ denotes Human
R14780 T21609 T21608 arg1Of PBMC,Human
R14781 T21609 T21610 arg1Of PBMC,were
R14782 T21609 T21611 arg2Of PBMC,incubated
R14783 T21611 T21610 arg2Of incubated,were
R14784 T21611 T21612 arg1Of incubated,with
R14785 T21611 T21615 arg1Of incubated,or
R14786 T21614 T21612 arg2Of control,with
R14787 T21614 T21613 arg1Of control,medium
R14788 T21616 T21617 arg1Of GP,(
R14789 T21616 T21623 arg1Of GP,for
R14790 T21616 T21630 arg1Of GP,were
R14791 T21616 T21631 arg2Of GP,incubated
R14792 T21618 T21619 arg1Of 1,and
R14793 T21620 T21619 arg2Of 100,and
R14794 T21621 T21617 arg2Of μg,(
R14795 T21621 T21618 arg1Of μg,1
R14796 T21621 T21620 arg1Of μg,100
R14797 T21622 T21617 arg3Of ),(
R14798 T21625 T21623 arg2Of h,for
R14799 T21625 T21624 arg1Of h,1
R14800 T21625 T21626 arg1Of h,at
R14801 T21628 T21627 arg1Of Nuclear,37°C.
R14802 T21629 T21626 arg2Of extracts,at
R14803 T21629 T21628 arg1Of extracts,Nuclear
R14804 T21631 T21615 arg2Of incubated,or
R14805 T21631 T21630 arg2Of incubated,were
R14806 T21631 T21632 arg1Of incubated,with
R14807 T21635 T21636 arg1Of NFAT,","
R14808 T21636 T21638 arg1Of ",",","
R14809 T21637 T21636 arg2Of NFκB,","
R14810 T21638 T21640 arg1Of ",",or
R14811 T21639 T21638 arg2Of NFIL-6,","
R14812 T21641 T21640 arg2Of NFκB-IL-8,or
R14813 T21643 T21632 arg2Of probe,with
R14814 T21643 T21633 arg1Of probe,a
R14815 T21643 T21634 arg1Of probe,32P-labeled
R14816 T21643 T21635 arg1Of probe,NFAT
R14817 T21643 T21637 arg1Of probe,NFκB
R14818 T21643 T21639 arg1Of probe,NFIL-6
R14819 T21643 T21641 arg1Of probe,NFκB-IL-8
R14820 T21643 T21642 arg1Of probe,oligonucleotide
R14821 T21643 T21644 arg1Of probe,corresponding
R14822 T21644 T21645 arg1Of corresponding,to
R14823 T21647 T21648 arg1Of IFNγ,","
R14824 T21648 T21650 arg1Of ",",","
R14825 T21649 T21648 arg2Of TNFα,","
R14826 T21650 T21652 arg1Of ",",and
R14827 T21651 T21650 arg2Of IL-6,","
R14828 T21653 T21652 arg2Of IL-8,and
R14829 T21655 T21645 arg2Of promoters,to
R14830 T21655 T21646 arg1Of promoters,the
R14831 T21655 T21647 arg1Of promoters,IFNγ
R14832 T21655 T21649 arg1Of promoters,TNFα
R14833 T21655 T21651 arg1Of promoters,IL-6
R14834 T21655 T21653 arg1Of promoters,IL-8
R14835 T21655 T21654 arg1Of promoters,gene
R14836 T21655 T21656 arg1Of promoters,(
R14837 T21658 T21656 arg2Of 1,(
R14838 T21658 T21657 arg1Of 1,Table
R14839 T21659 T21656 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T21503 231-235 Protein denotes IL-8
T21502 222-226 Protein denotes IL-6
T21501 216-220 Protein denotes TNFα
T21500 210-214 Protein denotes IFNγ
T21499 162-166 Protein denotes IL-8
T21498 147-153 Protein denotes NFIL-6
T21497 135-139 Protein denotes NFAT

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T21843 222-226 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T21842 216-220 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T21839 231-235 http://www.uniprot.org/uniprot/P10145 denotes IL-8
T21838 162-166 http://www.uniprot.org/uniprot/P10145 denotes IL-8

GO-MF

Id Subject Object Predicate Lexical cue
T21527 222-226 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T21524 231-235 http://purl.obolibrary.org/obo/GO_0005153 denotes IL-8
T21523 162-166 http://purl.obolibrary.org/obo/GO_0005153 denotes IL-8

sentences

Id Subject Object Predicate Lexical cue
T21462 0-261 Sentence denotes Human PBMC were incubated with medium control or GP (1 and 100 μg) for 1 h at 37°C. Nuclear extracts were incubated with a 32P-labeled NFAT, NFκB, NFIL-6 or NFκB-IL-8 oligonucleotide probe corresponding to the IFNγ, TNFα, IL-6 and IL-8 gene promoters (Table 1).
T69 0-83 Sentence denotes Human PBMC were incubated with medium control or GP (1 and 100 μg) for 1 h at 37°C.
T70 84-261 Sentence denotes Nuclear extracts were incubated with a 32P-labeled NFAT, NFκB, NFIL-6 or NFκB-IL-8 oligonucleotide probe corresponding to the IFNγ, TNFα, IL-6 and IL-8 gene promoters (Table 1).

simple1

Id Subject Object Predicate Lexical cue
T21582 231-235 Protein denotes IL-8
T21581 222-226 Protein denotes IL-6
T21580 216-220 Protein denotes TNFα
T21579 210-214 Protein denotes IFNγ
T21578 162-166 Protein denotes IL-8
T21577 147-153 Protein denotes NFIL-6
T21576 135-139 Protein denotes NFAT

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T22268 231-235 Protein denotes IL-8
T22267 222-226 Protein denotes IL-6
T22266 216-220 Protein denotes TNFα
T22265 210-214 Protein denotes IFNγ
T22264 162-166 Protein denotes IL-8
T22263 147-153 Protein denotes NFIL-6
T22262 135-139 Protein denotes NFAT

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T21862 231-235 Protein denotes IL-8
T21861 222-226 Protein denotes IL-6
T21860 216-220 Protein denotes TNFα
T21859 210-214 Protein denotes IFNγ
T21858 162-166 Protein denotes IL-8
T21857 147-153 Protein denotes NFIL-6
T21856 135-139 Protein denotes NFAT

DLUT931

Id Subject Object Predicate Lexical cue
T21902 189-202 Positive_regulation denotes corresponding
T21887 231-235 Protein denotes IL-8
T21886 222-226 Protein denotes IL-6
T21885 216-220 Protein denotes TNFα
T21884 210-214 Protein denotes IFNγ
T21883 162-166 Protein denotes IL-8
T21882 147-153 Protein denotes NFIL-6
T21881 135-139 Protein denotes NFAT
R15030 T21884 T21902 themeOf IFNγ,corresponding
R15031 T21885 T21902 themeOf TNFα,corresponding
R15032 T21886 T21902 themeOf IL-6,corresponding

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T22257 157-166 Protein denotes NFκB-IL-8
T22254 210-221 Protein denotes IFNγ, TNFα,
T22253 203-250 Protein denotes to the IFNγ, TNFα, IL-6 and IL-8 gene promoters
T22251 6-10 Entity denotes PBMC
T22249 147-153 Protein denotes NFIL-6
T22247 216-220 Protein denotes TNFα
T22246 84-91 Entity denotes Nuclear
T22245 203-250 Entity denotes to the IFNγ, TNFα, IL-6 and IL-8 gene promoters
T22234 157-182 Entity denotes NFκB-IL-8 oligonucleotide
T22229 71-74 Entity denotes 1 h
T22227 157-166 Protein denotes NFκB-IL-8
T22223 162-166 Protein denotes IL-8
T22220 92-100 Entity denotes extracts
T22219 231-235 Protein denotes IL-8
T22216 141-145 Protein denotes NFκB
T22215 135-139 Protein denotes NFAT
T22214 222-226 Protein denotes IL-6
R15304 T22245 T22254 partOf "to the IFNγ, TNFα, IL-6 and IL-8 gene promoters","IFNγ, TNFα,"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T21994 260-261 . denotes .
T21993 259-260 -RRB- denotes )
T21992 258-259 CD denotes 1
T21991 252-257 NNP denotes Table
T21990 251-252 -LRB- denotes (
T21989 241-250 NNS denotes promoters
T21988 236-240 NN denotes gene
T21987 231-235 NNP denotes IL-8
T21986 227-230 CC denotes and
T21985 222-226 NNP denotes IL-6
T21984 220-221 , denotes ,
T21983 216-220 NNP denotes TNFα
T21982 214-215 , denotes ,
T21981 210-214 NNP denotes IFNγ
T21980 206-209 DT denotes the
T21979 203-205 TO denotes to
T21978 189-202 JJ denotes corresponding
T21977 183-188 NN denotes probe
T21976 167-182 NN denotes oligonucleotide
T21975 157-166 JJ denotes NFκB-IL-8
T21974 154-156 CC denotes or
T21973 147-153 NNP denotes NFIL-6
T21972 145-146 , denotes ,
T21971 141-145 NNP denotes NFκB
T21970 139-140 , denotes ,
T21969 135-139 NNP denotes NFAT
T21968 123-134 JJ denotes 32P-labeled
T21967 121-122 DT denotes a
T21966 116-120 IN denotes with
T21965 106-115 VBN denotes incubated
T21964 101-105 VBD denotes were
T21963 92-100 NNS denotes extracts
T21962 84-91 NNP denotes Nuclear
T21961 81-83 NNP denotes C.
T21960 80-81 CD denotes °
T21959 78-80 CD denotes 37
T21958 75-77 IN denotes at
T21957 73-74 NN denotes h
T21956 71-72 CD denotes 1
T21955 67-70 IN denotes for
T21954 65-66 -RRB- denotes )
T21953 63-65 NN denotes μg
T21952 59-62 CD denotes 100
T21951 55-58 CC denotes and
T21950 53-54 CD denotes 1
T21949 52-53 -LRB- denotes (
T21948 49-51 NNP denotes GP
T21947 46-48 CC denotes or
T21946 38-45 NN denotes control
T21945 31-37 NN denotes medium
T21944 26-30 IN denotes with
T21943 16-25 VBN denotes incubated
T21942 11-15 VBD denotes were
T21941 6-10 NNP denotes PBMC
T21940 0-5 NNP denotes Human
R15051 T21940 T21941 compound Human,PBMC
R15052 T21941 T21943 nsubjpass PBMC,incubated
R15053 T21942 T21943 auxpass were,incubated
R15054 T21943 T21943 ROOT incubated,incubated
R15055 T21944 T21943 prep with,incubated
R15056 T21945 T21946 compound medium,control
R15057 T21946 T21944 pobj control,with
R15058 T21947 T21946 cc or,control
R15059 T21948 T21946 conj GP,control
R15060 T21949 T21950 punct (,1
R15061 T21950 T21948 nummod 1,GP
R15062 T21951 T21948 cc and,GP
R15063 T21952 T21953 nummod 100,μg
R15064 T21953 T21948 conj μg,GP
R15065 T21954 T21953 punct ),μg
R15066 T21955 T21943 prep for,incubated
R15067 T21956 T21957 nummod 1,h
R15068 T21957 T21955 pobj h,for
R15069 T21958 T21957 prep at,h
R15070 T21959 T21960 nummod 37,°
R15071 T21960 T21962 compound °,Nuclear
R15072 T21961 T21962 compound C.,Nuclear
R15073 T21962 T21963 compound Nuclear,extracts
R15074 T21963 T21958 pobj extracts,at
R15075 T21964 T21965 auxpass were,incubated
R15076 T21965 T21943 conj incubated,incubated
R15077 T21966 T21965 prep with,incubated
R15078 T21967 T21969 det a,NFAT
R15079 T21968 T21969 compound 32P-labeled,NFAT
R15080 T21969 T21966 pobj NFAT,with
R15081 T21970 T21969 punct ",",NFAT
R15082 T21971 T21969 conj NFκB,NFAT
R15083 T21972 T21971 punct ",",NFκB
R15084 T21973 T21971 conj NFIL-6,NFκB
R15085 T21974 T21973 cc or,NFIL-6
R15086 T21975 T21977 amod NFκB-IL-8,probe
R15087 T21976 T21977 compound oligonucleotide,probe
R15088 T21977 T21973 conj probe,NFIL-6
R15089 T21978 T21977 amod corresponding,probe
R15090 T21979 T21978 prep to,corresponding
R15091 T21980 T21981 det the,IFNγ
R15092 T21981 T21989 nmod IFNγ,promoters
R15093 T21982 T21981 punct ",",IFNγ
R15094 T21983 T21981 conj TNFα,IFNγ
R15095 T21984 T21983 punct ",",TNFα
R15096 T21985 T21983 conj IL-6,TNFα
R15097 T21986 T21985 cc and,IL-6
R15098 T21987 T21985 conj IL-8,IL-6
R15099 T21988 T21989 compound gene,promoters
R15100 T21989 T21979 pobj promoters,to
R15101 T21990 T21989 punct (,promoters
R15102 T21991 T21993 nmod Table,)
R15103 T21992 T21991 nummod 1,Table
R15104 T21993 T21989 punct ),promoters
R15105 T21994 T21943 punct .,incubated

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T21540 222-226 Protein denotes IL-6
T21539 216-220 Protein denotes TNFα
T21538 210-214 Protein denotes IFNγ
T21537 157-182 Protein denotes NFκB-IL-8 oligonucleotide
T21536 147-153 Protein denotes NFIL-6
T21535 141-145 Protein denotes NFκB
T21534 135-139 Protein denotes NFAT

testone

Id Subject Object Predicate Lexical cue
T21398 231-235 Protein denotes IL-8
T21397 222-226 Protein denotes IL-6
T21396 216-220 Protein denotes TNFα
T21395 210-214 Protein denotes IFNγ
T21394 162-166 Protein denotes IL-8
T21393 147-153 Protein denotes NFIL-6
T21392 135-139 Protein denotes NFAT

test3

Id Subject Object Predicate Lexical cue
T21444 231-235 Protein denotes IL-8
T21443 222-226 Protein denotes IL-6
T21442 216-220 Protein denotes TNFα
T21441 210-214 Protein denotes IFNγ
T21440 162-166 Protein denotes IL-8
T21439 147-153 Protein denotes NFIL-6
T21438 135-139 Protein denotes NFAT
T21422 231-235 Protein denotes IL-8
T21421 222-226 Protein denotes IL-6
T21420 216-220 Protein denotes TNFα
T21419 210-214 Protein denotes IFNγ
T21418 162-166 Protein denotes IL-8
T21417 147-153 Protein denotes NFIL-6
T21416 135-139 Protein denotes NFAT