> top > docs > PMC:1472690 > spans > 620-1901 > annotations

PMC:1472690 / 620-1901 JSONTXT

Annnotations TAB JSON ListView MergeView

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T311 294-298 Protein denotes IL-8
T312 384-388 Protein denotes IL-8
T313 414-437 Protein denotes IL-1receptor antagonist
T314 438-440 Protein denotes RA
T315 542-546 Protein denotes IL-8
T316 654-660 Protein denotes IL-1RA
T317 765-771 Protein denotes TSST-1
T318 857-863 Protein denotes TSST-1
T319 893-899 Protein denotes NFIL-6
T320 904-908 Protein denotes NFAT
T321 947-953 Protein denotes IL-1RA
T322 995-1001 Protein denotes TSST-1
T323 1049-1054 Protein denotes IL-1β
T324 1059-1063 Protein denotes IL-6
T325 1112-1118 Protein denotes TSST-1
T326 1127-1132 Protein denotes IL-1β
T327 1133-1139 Protein denotes IL-1RA
T328 1231-1237 Protein denotes TSST-1
T329 1247-1251 Protein denotes IL-1
T330 1276-1280 Protein denotes IL-2
T304 48-67 Protein denotes NFinterleukin(IL)-6
T305 72-76 Protein denotes NFAT
T306 95-101 Protein denotes TSST-1
T307 144-149 Protein denotes IL-1β
T308 151-155 Protein denotes IL-6
T309 157-180 Protein denotes tumor necrosis factor α
T310 184-196 Protein denotes interferon γ

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T438 1112-1118 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T439 1231-1237 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T440 184-196 http://www.uniprot.org/uniprot/P01579 denotes interferon γ
T441 294-298 http://www.uniprot.org/uniprot/P10145 denotes IL-8
T442 384-388 http://www.uniprot.org/uniprot/P10145 denotes IL-8
T443 542-546 http://www.uniprot.org/uniprot/P10145 denotes IL-8
T444 654-660 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T445 947-953 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T446 1133-1139 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T449 1276-1280 http://www.uniprot.org/uniprot/P60568 denotes IL-2
T427 151-155 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T428 1059-1063 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T430 144-149 http://www.uniprot.org/uniprot/P01584 denotes IL-1β
T431 1049-1054 http://www.uniprot.org/uniprot/P01584 denotes IL-1β
T432 1127-1132 http://www.uniprot.org/uniprot/P01584 denotes IL-1β
T434 95-101 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T435 765-771 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T436 857-863 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T437 995-1001 http://www.uniprot.org/uniprot/P06886 denotes TSST-1

GO-BP

Id Subject Object Predicate Lexical cue
T214 163-171 http://purl.obolibrary.org/obo/GO_0001906 denotes necrosis
T215 163-171 http://purl.obolibrary.org/obo/GO_0008219 denotes necrosis
T216 163-171 http://purl.obolibrary.org/obo/GO_0019835 denotes necrosis
T217 163-171 http://purl.obolibrary.org/obo/GO_0070265 denotes necrosis
T218 1010-1031 http://purl.obolibrary.org/obo/GO_0006954 denotes inflammatory response
T220 1262-1280 http://purl.obolibrary.org/obo/GO_0032623 denotes production of IL-2
T221 1262-1280 http://purl.obolibrary.org/obo/GO_0032663 denotes production of IL-2

GO-MF

Id Subject Object Predicate Lexical cue
T336 872-883 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T338 341-348 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T339 592-599 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T340 876-883 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T343 151-155 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T344 1059-1063 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T346 1247-1251 http://purl.obolibrary.org/obo/GO_0005149 denotes IL-1
T350 184-196 http://purl.obolibrary.org/obo/GO_0005133 denotes interferon γ
T351 294-298 http://purl.obolibrary.org/obo/GO_0005153 denotes IL-8
T352 384-388 http://purl.obolibrary.org/obo/GO_0005153 denotes IL-8
T353 542-546 http://purl.obolibrary.org/obo/GO_0005153 denotes IL-8
T354 1276-1280 http://purl.obolibrary.org/obo/GO_0005134 denotes IL-2

GO-CC

Id Subject Object Predicate Lexical cue
T357 509-514 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

sentences

Id Subject Object Predicate Lexical cue
T193 0-225 Sentence denotes Despite an activation of nuclear factor (NF)κB, NFinterleukin(IL)-6 and NFAT similar to LPS or TSST-1, we observed no significant production of IL-1β, IL-6, tumor necrosis factor α or interferon γ induced by glucan phosphate.
T194 226-313 Sentence denotes Glucan phosphate-treated leukocytes induced a substantial amount of IL-8 (peak at 18 h:
T195 314-398 Sentence denotes 5000 pg/ml), likely due to binding of NFκB to a consensus site in the IL-8 promoter.
T196 399-467 Sentence denotes An increase in IL-1receptor antagonist(RA) production (peak at 24 h:
T197 468-554 Sentence denotes 12000 pg/ml) by glucan phosphate-treated cells positively correlated with IL-8 levels.
T198 555-717 Sentence denotes Glucan phosphate induced significant binding to a known NFIL-6 site and a new NFAT site within the IL-1RA promoter, which was confirmed by inhibition experiments.
T199 718-954 Sentence denotes When applied in combination with either LPS or TSST-1 at the same time points, we detected that glucan phosphate elevated the LPS- and the TSST-1-induced DNA binding of NFκB, NFIL-6 and NFAT, leading to a synergistic increase of IL-1RA.
T200 955-1064 Sentence denotes Further, glucan phosphate modulated the TSST-1-induced inflammatory response via reduction of IL-1β and IL-6.
T201 1065-1185 Sentence denotes As a consequence, glucan phosphate shifted the TSST-1-induced IL-1β/IL-1RA ratio towards an anti-inflammatory phenotype.
T202 1186-1281 Sentence denotes Subsequently, glucan phosphate decreased the TSST-1-induced, IL-1-dependent production of IL-2.
T7 0-225 Sentence denotes Despite an activation of nuclear factor (NF)κB, NFinterleukin(IL)-6 and NFAT similar to LPS or TSST-1, we observed no significant production of IL-1β, IL-6, tumor necrosis factor α or interferon γ induced by glucan phosphate.
T8 226-313 Sentence denotes Glucan phosphate-treated leukocytes induced a substantial amount of IL-8 (peak at 18 h:
T9 314-398 Sentence denotes 5000 pg/ml), likely due to binding of NFκB to a consensus site in the IL-8 promoter.
T10 399-467 Sentence denotes An increase in IL-1receptor antagonist(RA) production (peak at 24 h:
T11 468-554 Sentence denotes 12000 pg/ml) by glucan phosphate-treated cells positively correlated with IL-8 levels.
T12 555-717 Sentence denotes Glucan phosphate induced significant binding to a known NFIL-6 site and a new NFAT site within the IL-1RA promoter, which was confirmed by inhibition experiments.
T13 718-954 Sentence denotes When applied in combination with either LPS or TSST-1 at the same time points, we detected that glucan phosphate elevated the LPS- and the TSST-1-induced DNA binding of NFκB, NFIL-6 and NFAT, leading to a synergistic increase of IL-1RA.
T14 955-1064 Sentence denotes Further, glucan phosphate modulated the TSST-1-induced inflammatory response via reduction of IL-1β and IL-6.
T15 1065-1185 Sentence denotes As a consequence, glucan phosphate shifted the TSST-1-induced IL-1β/IL-1RA ratio towards an anti-inflammatory phenotype.
T16 1186-1281 Sentence denotes Subsequently, glucan phosphate decreased the TSST-1-induced, IL-1-dependent production of IL-2.

simple1

Id Subject Object Predicate Lexical cue
T397 48-67 Protein denotes NFinterleukin(IL)-6
T398 72-76 Protein denotes NFAT
T399 95-101 Protein denotes TSST-1
T400 144-149 Protein denotes IL-1β
T401 151-155 Protein denotes IL-6
T402 157-180 Protein denotes tumor necrosis factor α
T403 184-196 Protein denotes interferon γ
T404 294-298 Protein denotes IL-8
T405 384-388 Protein denotes IL-8
T406 414-437 Protein denotes IL-1receptor antagonist
T407 438-440 Protein denotes RA
T408 542-546 Protein denotes IL-8
T409 654-660 Protein denotes IL-1RA
T410 765-771 Protein denotes TSST-1
T411 857-863 Protein denotes TSST-1
T412 893-899 Protein denotes NFIL-6
T413 904-908 Protein denotes NFAT
T414 947-953 Protein denotes IL-1RA
T415 995-1001 Protein denotes TSST-1
T416 1049-1054 Protein denotes IL-1β
T417 1059-1063 Protein denotes IL-6
T418 1112-1118 Protein denotes TSST-1
T419 1127-1132 Protein denotes IL-1β
T420 1133-1139 Protein denotes IL-1RA
T421 1231-1237 Protein denotes TSST-1
T422 1247-1251 Protein denotes IL-1
T423 1276-1280 Protein denotes IL-2

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T849 1059-1063 Protein denotes IL-6
T850 1112-1118 Protein denotes TSST-1
T851 1127-1132 Protein denotes IL-1β
T852 1133-1139 Protein denotes IL-1RA
T853 1231-1237 Protein denotes TSST-1
T854 1247-1251 Protein denotes IL-1
T855 1276-1280 Protein denotes IL-2
T860 130-140 Gene_expression denotes production
T861 11-21 Positive_regulation denotes activation
T862 197-204 Positive_regulation denotes induced
T863 341-348 Binding denotes binding
T864 262-269 Positive_regulation denotes induced
T865 442-452 Gene_expression denotes production
T866 402-410 Positive_regulation denotes increase
T867 592-599 Binding denotes binding
T868 572-579 Positive_regulation denotes induced
T869 831-839 Positive_regulation denotes elevated
T870 876-883 Binding denotes binding
T871 864-871 Positive_regulation denotes induced
T872 910-917 Positive_regulation denotes leading
T873 935-943 Positive_regulation denotes increase
T874 1036-1045 Negative_regulation denotes reduction
T875 1002-1009 Positive_regulation denotes induced
T876 1119-1126 Positive_regulation denotes induced
T877 1262-1272 Gene_expression denotes production
T878 1238-1245 Positive_regulation denotes induced
T879 1217-1226 Negative_regulation denotes decreased
T829 151-155 Protein denotes IL-6
T830 157-180 Protein denotes tumor necrosis factor α
T831 184-196 Protein denotes interferon γ
T832 48-67 Protein denotes NFinterleukin(IL)-6
T833 72-76 Protein denotes NFAT
T834 95-101 Protein denotes TSST-1
T835 144-149 Protein denotes IL-1β
T836 294-298 Protein denotes IL-8
T837 384-388 Protein denotes IL-8
T838 414-437 Protein denotes IL-1receptor antagonist
T839 438-440 Protein denotes RA
T840 542-546 Protein denotes IL-8
T841 654-660 Protein denotes IL-1RA
T842 765-771 Protein denotes TSST-1
T843 857-863 Protein denotes TSST-1
T844 893-899 Protein denotes NFIL-6
T845 904-908 Protein denotes NFAT
T846 947-953 Protein denotes IL-1RA
T847 995-1001 Protein denotes TSST-1
T848 1049-1054 Protein denotes IL-1β
R219 T870 T869 themeOf binding,elevated
R220 T870 T871 themeOf binding,induced
R221 T870 T871 themeOf binding,induced
R222 T873 T872 themeOf increase,leading
R349 T843 T871 causeOf TSST-1,induced
R350 T843 T871 causeOf TSST-1,induced
R351 T844 T870 themeOf NFIL-6,binding
R352 T845 T870 themeOf NFAT,binding
R353 T846 T873 themeOf IL-1RA,increase
R204 T849 T874 themeOf IL-6,reduction
R205 T850 T876 causeOf TSST-1,induced
R206 T851 T876 themeOf IL-1β,induced
R207 T853 T878 causeOf TSST-1,induced
R208 T855 T877 themeOf IL-2,production
R211 T860 T862 themeOf production,induced
R212 T860 T862 themeOf production,induced
R213 T860 T862 themeOf production,induced
R214 T860 T862 themeOf production,induced
R215 T865 T866 themeOf production,increase
R216 T865 T866 themeOf production,increase
R217 T867 T868 themeOf binding,induced
R218 T870 T869 themeOf binding,elevated
R223 T877 T878 themeOf production,induced
R224 T877 T879 themeOf production,decreased
R338 T829 T860 themeOf IL-6,production
R339 T830 T860 themeOf tumor necrosis factor α,production
R340 T831 T860 themeOf interferon γ,production
R341 T832 T861 themeOf NFinterleukin(IL)-6,activation
R342 T833 T861 themeOf NFAT,activation
R343 T835 T860 themeOf IL-1β,production
R344 T836 T864 themeOf IL-8,induced
R345 T837 T863 themeOf IL-8,binding
R346 T838 T865 themeOf IL-1receptor antagonist,production
R347 T839 T865 themeOf RA,production
R348 T841 T867 themeOf IL-1RA,binding
R354 T847 T875 themeOf TSST-1,induced
R355 T848 T874 themeOf IL-1β,reduction

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T469 857-863 Protein denotes TSST-1
T470 893-899 Protein denotes NFIL-6
T471 904-908 Protein denotes NFAT
T472 947-953 Protein denotes IL-1RA
T473 995-1001 Protein denotes TSST-1
T474 1049-1054 Protein denotes IL-1β
T475 1059-1063 Protein denotes IL-6
T476 1112-1118 Protein denotes TSST-1
T477 1127-1132 Protein denotes IL-1β
T478 1133-1139 Protein denotes IL-1RA
T479 1231-1237 Protein denotes TSST-1
T480 1247-1251 Protein denotes IL-1
T481 1276-1280 Protein denotes IL-2
T486 197-204 Positive_regulation denotes induced
T487 130-140 Gene_expression denotes production
T488 11-21 Positive_regulation denotes activation
T489 262-269 Positive_regulation denotes induced
T490 341-348 Binding denotes binding
T491 442-452 Gene_expression denotes production
T492 402-410 Positive_regulation denotes increase
T493 592-599 Binding denotes binding
T494 572-579 Positive_regulation denotes induced
T495 876-883 Binding denotes binding
T496 864-871 Positive_regulation denotes induced
T497 831-839 Positive_regulation denotes elevated
T498 935-943 Positive_regulation denotes increase
T499 1036-1045 Negative_regulation denotes reduction
T500 1002-1009 Positive_regulation denotes induced
T501 1119-1126 Positive_regulation denotes induced
T502 1238-1245 Positive_regulation denotes induced
T503 1262-1272 Gene_expression denotes production
T504 1217-1226 Negative_regulation denotes decreased
T505 1252-1261 Positive_regulation denotes dependent
T455 151-155 Protein denotes IL-6
T456 157-180 Protein denotes tumor necrosis factor α
T457 184-196 Protein denotes interferon γ
T458 48-67 Protein denotes NFinterleukin(IL)-6
T459 72-76 Protein denotes NFAT
T460 95-101 Protein denotes TSST-1
T461 144-149 Protein denotes IL-1β
T462 294-298 Protein denotes IL-8
T463 384-388 Protein denotes IL-8
T464 414-437 Protein denotes IL-1receptor antagonist
T465 438-440 Protein denotes RA
T466 542-546 Protein denotes IL-8
T467 654-660 Protein denotes IL-1RA
T468 765-771 Protein denotes TSST-1
R108 T469 T496 causeOf TSST-1,induced
R109 T469 T496 causeOf TSST-1,induced
R110 T470 T495 themeOf NFIL-6,binding
R111 T471 T495 themeOf NFAT,binding
R112 T472 T498 themeOf IL-1RA,increase
R120 T481 T503 themeOf IL-2,production
R123 T487 T486 themeOf production,induced
R124 T487 T486 themeOf production,induced
R125 T487 T486 themeOf production,induced
R126 T487 T486 themeOf production,induced
R127 T491 T492 themeOf production,increase
R128 T491 T492 themeOf production,increase
R129 T493 T494 themeOf binding,induced
R130 T495 T497 themeOf binding,elevated
R131 T495 T497 themeOf binding,elevated
R132 T495 T496 themeOf binding,induced
R133 T495 T496 themeOf binding,induced
R134 T503 T502 themeOf production,induced
R135 T503 T505 themeOf production,dependent
R136 T503 T504 themeOf production,decreased
R246 T455 T487 themeOf IL-6,production
R247 T456 T487 themeOf tumor necrosis factor α,production
R248 T457 T487 themeOf interferon γ,production
R249 T457 T486 themeOf interferon γ,induced
R250 T458 T488 themeOf NFinterleukin(IL)-6,activation
R251 T459 T488 themeOf NFAT,activation
R252 T461 T487 themeOf IL-1β,production
R253 T461 T486 themeOf IL-1β,induced
R254 T462 T489 themeOf IL-8,induced
R255 T463 T490 themeOf IL-8,binding
R256 T464 T491 themeOf IL-1receptor antagonist,production
R257 T465 T491 themeOf RA,production
R258 T467 T493 themeOf IL-1RA,binding
R113 T473 T500 themeOf TSST-1,induced
R114 T474 T499 themeOf IL-1β,reduction
R115 T475 T499 themeOf IL-6,reduction
R116 T476 T501 causeOf TSST-1,induced
R117 T477 T501 themeOf IL-1β,induced
R118 T479 T502 causeOf TSST-1,induced
R119 T480 T505 causeOf IL-1,dependent

DLUT931

Id Subject Object Predicate Lexical cue
T597 1127-1132 Protein denotes IL-1β
T598 1133-1139 Protein denotes IL-1RA
T599 1231-1237 Protein denotes TSST-1
T600 1247-1251 Protein denotes IL-1
T601 1276-1280 Protein denotes IL-2
T606 11-21 Positive_regulation denotes activation
T607 130-140 Gene_expression denotes production
T608 197-204 Positive_regulation denotes induced
T609 262-269 Positive_regulation denotes induced
T610 341-348 Binding denotes binding
T611 442-452 Gene_expression denotes production
T612 402-410 Positive_regulation denotes increase
T613 592-599 Binding denotes binding
T614 572-579 Positive_regulation denotes induced
T615 876-883 Binding denotes binding
T616 935-943 Positive_regulation denotes increase
T617 831-839 Positive_regulation denotes elevated
T618 864-871 Positive_regulation denotes induced
T619 1036-1045 Negative_regulation denotes reduction
T620 1119-1126 Positive_regulation denotes induced
T621 1100-1107 Negative_regulation denotes shifted
T622 1262-1272 Gene_expression denotes production
T623 1238-1245 Positive_regulation denotes induced
T624 1217-1226 Negative_regulation denotes decreased
T575 151-155 Protein denotes IL-6
T576 157-180 Protein denotes tumor necrosis factor α
T577 184-196 Protein denotes interferon γ
T578 48-67 Protein denotes NFinterleukin(IL)-6
T579 72-76 Protein denotes NFAT
T580 95-101 Protein denotes TSST-1
T581 144-149 Protein denotes IL-1β
T582 294-298 Protein denotes IL-8
T583 384-388 Protein denotes IL-8
T584 414-437 Protein denotes IL-1receptor antagonist
T585 438-440 Protein denotes RA
T586 542-546 Protein denotes IL-8
T587 654-660 Protein denotes IL-1RA
T588 765-771 Protein denotes TSST-1
T589 857-863 Protein denotes TSST-1
T590 893-899 Protein denotes NFIL-6
T591 904-908 Protein denotes NFAT
T592 947-953 Protein denotes IL-1RA
T593 995-1001 Protein denotes TSST-1
T594 1049-1054 Protein denotes IL-1β
T595 1059-1063 Protein denotes IL-6
T596 1112-1118 Protein denotes TSST-1
R146 T610 T609 themeOf binding,induced
R148 T611 T612 themeOf production,increase
R307 T585 T611 themeOf RA,production
R314 T595 T619 themeOf IL-6,reduction
R137 T597 T620 themeOf IL-1β,induced
R138 T599 T623 causeOf TSST-1,induced
R139 T601 T622 themeOf IL-2,production
R142 T607 T608 themeOf production,induced
R143 T607 T608 themeOf production,induced
R144 T607 T608 themeOf production,induced
R145 T607 T608 themeOf production,induced
R147 T611 T612 themeOf production,increase
R149 T613 T614 themeOf binding,induced
R150 T615 T617 themeOf binding,elevated
R151 T615 T618 themeOf binding,induced
R152 T620 T621 themeOf induced,shifted
R153 T622 T623 themeOf production,induced
R154 T623 T624 themeOf induced,decreased
R298 T575 T607 themeOf IL-6,production
R299 T576 T607 themeOf tumor necrosis factor α,production
R300 T577 T607 themeOf interferon γ,production
R301 T579 T606 themeOf NFAT,activation
R302 T581 T607 themeOf IL-1β,production
R303 T582 T609 themeOf IL-8,induced
R304 T582 T610 themeOf IL-8,binding
R305 T583 T610 themeOf IL-8,binding
R306 T584 T611 themeOf IL-1receptor antagonist,production
R308 T587 T613 themeOf IL-1RA,binding
R309 T589 T618 causeOf TSST-1,induced
R310 T590 T615 themeOf NFIL-6,binding
R311 T591 T615 themeOf NFAT,binding
R312 T592 T616 themeOf IL-1RA,increase
R313 T594 T619 themeOf IL-1β,reduction
R315 T596 T620 causeOf TSST-1,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T762 964-970 Entity denotes glucan
T763 555-561 Entity denotes Glucan
T764 357-397 Entity denotes to a consensus site in the IL-8 promoter
T765 72-102 Protein denotes NFAT similar to LPS or TSST-1,
T766 633-637 Protein denotes NFAT
T767 95-101 Protein denotes TSST-1
T768 964-980 Entity denotes glucan phosphate
T769 1200-1206 Entity denotes glucan
T770 1137-1139 Protein denotes RA
T771 1273-1280 Protein denotes of IL-2
T772 291-298 Protein denotes of IL-8
T773 157-180 Protein denotes tumor necrosis factor α
T775 1083-1099 Entity denotes glucan phosphate
T779 484-514 Entity denotes glucan phosphate-treated cells
T781 840-848 Protein denotes the LPS-
T782 765-771 Protein denotes TSST-1
T783 627-670 Entity denotes a new NFAT site within the IL-1RA promoter,
T784 904-908 Protein denotes NFAT
T785 814-820 Entity denotes glucan
T786 380-397 Entity denotes the IL-8 promoter
T787 484-490 Entity denotes glucan
T788 1049-1054 Protein denotes IL-1β
T789 184-224 Protein denotes interferon γ induced by glucan phosphate
T790 48-67 Protein denotes NFinterleukin(IL)-6
T793 427-441 Entity denotes antagonist(RA)
T794 1127-1137 Protein denotes IL-1β/IL-1
T795 491-508 Entity denotes phosphate-treated
T796 1247-1261 Protein denotes IL-1-dependent
T797 1154-1174 Entity denotes an anti-inflammatory
T798 226-232 Entity denotes Glucan
T799 384-388 Protein denotes IL-8
T800 88-91 Entity denotes LPS
T801 758-761 Entity denotes LPS
T802 411-452 Protein denotes in IL-1receptor antagonist(RA) production
T803 1112-1126 Protein denotes TSST-1-induced
T805 995-1009 Protein denotes TSST-1-induced
T806 603-622 Entity denotes a known NFIL-6 site
T809 414-418 Protein denotes IL-1
T810 1133-1137 Protein denotes IL-1
T811 887-891 Protein denotes NFκB
T812 184-224 Gene_expression denotes interferon γ induced by glucan phosphate
T813 184-224 Positive_regulation denotes interferon γ induced by glucan phosphate
T814 1186-1280 Negative_regulation denotes Subsequently, glucan phosphate decreased the TSST-1-induced, IL-1-dependent production of IL-2
T729 893-899 Protein denotes NFIL-6
T730 226-261 Entity denotes Glucan phosphate-treated leukocytes
T731 151-155 Protein denotes IL-6
T732 947-953 Protein denotes IL-1RA
T733 1231-1245 Protein denotes TSST-1-induced
T734 1083-1089 Entity denotes glucan
T735 438-440 Protein denotes RA
T736 650-670 Entity denotes the IL-1RA promoter,
T737 1127-1137 Protein denotes IL-1β/IL-1
T738 611-617 Protein denotes NFIL-6
T739 144-149 Protein denotes IL-1β
T743 233-250 Entity denotes phosphate-treated
T744 465-466 Entity denotes h
T747 654-660 Protein denotes IL-1RA
T748 1200-1216 Entity denotes glucan phosphate
T749 205-224 Entity denotes by glucan phosphate
T750 311-312 Entity denotes h
T751 857-871 Protein denotes TSST-1-induced
T752 542-546 Protein denotes IL-8
T753 208-214 Entity denotes glucan
T754 349-356 Protein denotes of NFκB
T755 1059-1063 Protein denotes IL-6
T817 103-224 Gene_expression denotes we observed no significant production of IL-1β, IL-6, tumor necrosis factor α or interferon γ induced by glucan phosphate
T758 809-830 Entity denotes that glucan phosphate
T759 555-579 Entity denotes Glucan phosphate induced
T815 1227-1280 Regulation denotes the TSST-1-induced, IL-1-dependent production of IL-2
T816 103-224 Gene_expression denotes we observed no significant production of IL-1β, IL-6, tumor necrosis factor α or interferon γ induced by glucan phosphate
T818 103-224 Gene_expression denotes we observed no significant production of IL-1β, IL-6, tumor necrosis factor α or interferon γ induced by glucan phosphate
T819 103-224 Gene_expression denotes we observed no significant production of IL-1β, IL-6, tumor necrosis factor α or interferon γ induced by glucan phosphate
T821 399-452 Positive_regulation denotes An increase in IL-1receptor antagonist(RA) production
T822 341-397 Binding denotes binding of NFκB to a consensus site in the IL-8 promoter
T823 1227-1280 Gene_expression denotes the TSST-1-induced, IL-1-dependent production of IL-2
R197 T771 T823 themeOf of IL-2,"the TSST-1-induced, IL-1-dependent production of IL-2"
R198 T773 T819 themeOf tumor necrosis factor α,"we observed no significant production of IL-1β, IL-6, tumor necrosis factor α or interferon γ induced by glucan phosphate"
R199 T786 T799 partOf the IL-8 promoter,IL-8
R200 T789 T812 themeOf interferon γ induced by glucan phosphate,interferon γ induced by glucan phosphate
R201 T789 T813 themeOf interferon γ induced by glucan phosphate,interferon γ induced by glucan phosphate
R202 T789 T818 themeOf interferon γ induced by glucan phosphate,"we observed no significant production of IL-1β, IL-6, tumor necrosis factor α or interferon γ induced by glucan phosphate"
R203 T796 T815 causeOf IL-1-dependent,"the TSST-1-induced, IL-1-dependent production of IL-2"
R328 T731 T816 themeOf IL-6,"we observed no significant production of IL-1β, IL-6, tumor necrosis factor α or interferon γ induced by glucan phosphate"
R329 T736 T747 partOf "the IL-1RA promoter,",IL-1RA
R330 T739 T817 themeOf IL-1β,"we observed no significant production of IL-1β, IL-6, tumor necrosis factor α or interferon γ induced by glucan phosphate"
R331 T748 T814 causeOf glucan phosphate,"Subsequently, glucan phosphate decreased the TSST-1-induced, IL-1-dependent production of IL-2"
R332 T749 T813 causeOf by glucan phosphate,interferon γ induced by glucan phosphate
R333 T754 T822 themeOf of NFκB,binding of NFκB to a consensus site in the IL-8 promoter
R335 T823 T814 themeOf "the TSST-1-induced, IL-1-dependent production of IL-2","Subsequently, glucan phosphate decreased the TSST-1-induced, IL-1-dependent production of IL-2"
R336 T823 T815 themeOf "the TSST-1-induced, IL-1-dependent production of IL-2","the TSST-1-induced, IL-1-dependent production of IL-2"

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T514 25-46 Protein denotes nuclear factor (NF)κB
T518 151-155 Protein denotes IL-6
T519 157-180 Protein denotes tumor necrosis factor α
T520 184-196 Protein denotes interferon γ
T521 11-21 Positive_regulation denotes activation
T522 11-21 Positive_regulation denotes activation
T523 11-21 Positive_regulation denotes activation
T515 48-67 Protein denotes NFinterleukin(IL)-6
T516 72-76 Protein denotes NFAT
T517 144-149 Protein denotes IL-1β
T524 130-140 Gene_expression denotes production
T525 130-140 Gene_expression denotes production
T526 130-140 Gene_expression denotes production
T527 130-140 Gene_expression denotes production
T528 197-204 Positive_regulation denotes induced
T529 197-204 Positive_regulation denotes induced
T530 197-204 Positive_regulation denotes induced
T531 197-204 Positive_regulation denotes induced
T532 294-298 Protein denotes IL-8
T533 352-356 Protein denotes NFκB
T534 384-397 Protein denotes IL-8 promoter
T535 284-290 Gene_expression denotes amount
T536 341-348 Binding denotes binding
T537 341-348 Binding denotes binding
T538 262-269 Positive_regulation denotes induced
T539 414-426 Protein denotes IL-1receptor
T540 542-546 Protein denotes IL-8
T541 611-622 Protein denotes NFIL-6 site
T542 633-642 Protein denotes NFAT site
T543 654-669 Protein denotes IL-1RA promoter
T544 592-599 Binding denotes binding
T545 592-599 Binding denotes binding
T546 681-690 Positive_regulation denotes confirmed
T547 572-579 Positive_regulation denotes induced
T548 572-579 Positive_regulation denotes induced
T549 887-891 Protein denotes NFκB
T550 893-899 Protein denotes NFIL-6
T551 904-908 Protein denotes NFAT
T552 947-953 Protein denotes IL-1RA
T553 876-883 Binding denotes binding
T554 876-883 Binding denotes binding
T555 876-883 Binding denotes binding
T556 935-943 Positive_regulation denotes increase
T557 831-839 Positive_regulation denotes elevated
T558 831-839 Positive_regulation denotes elevated
T559 831-839 Positive_regulation denotes elevated
T560 1049-1054 Protein denotes IL-1β
T561 1059-1063 Protein denotes IL-6
T562 1036-1045 Negative_regulation denotes reduction
T563 1036-1045 Negative_regulation denotes reduction
T564 1247-1251 Protein denotes IL-1
T565 1276-1280 Protein denotes IL-2
T566 1262-1272 Gene_expression denotes production
T567 1217-1226 Negative_regulation denotes decreased
R263 T514 T521 themeOf nuclear factor (NF)κB,activation
R264 T515 T522 themeOf NFinterleukin(IL)-6,activation
R265 T516 T523 themeOf NFAT,activation
R266 T517 T524 themeOf IL-1β,production
R267 T518 T525 themeOf IL-6,production
R268 T519 T526 themeOf tumor necrosis factor α,production
R269 T520 T527 themeOf interferon γ,production
R270 T524 T528 themeOf production,induced
R271 T525 T529 themeOf production,induced
R272 T526 T530 themeOf production,induced
R273 T527 T531 themeOf production,induced
R274 T532 T535 themeOf IL-8,amount
R275 T532 T536 themeOf IL-8,binding
R276 T533 T536 themeOf NFκB,binding
R277 T533 T537 themeOf NFκB,binding
R278 T534 T537 themeOf IL-8 promoter,binding
R279 T535 T538 themeOf amount,induced
R280 T542 T544 themeOf NFAT site,binding
R281 T543 T545 themeOf IL-1RA promoter,binding
R282 T543 T546 themeOf IL-1RA promoter,confirmed
R283 T544 T547 themeOf binding,induced
R284 T545 T548 themeOf binding,induced
R285 T549 T553 themeOf NFκB,binding
R286 T550 T554 themeOf NFIL-6,binding
R287 T551 T555 themeOf NFAT,binding
R288 T552 T556 themeOf IL-1RA,increase
R289 T553 T557 themeOf binding,elevated
R290 T554 T558 themeOf binding,elevated
R291 T555 T559 themeOf binding,elevated
R292 T560 T562 themeOf IL-1β,reduction
R293 T561 T563 themeOf IL-6,reduction
R294 T565 T566 themeOf IL-2,production
R295 T566 T567 themeOf production,decreased

testone

Id Subject Object Predicate Lexical cue
T40 48-67 Protein denotes NFinterleukin(IL)-6
T41 72-76 Protein denotes NFAT
T42 95-101 Protein denotes TSST-1
T43 144-149 Protein denotes IL-1β
T44 151-155 Protein denotes IL-6
T45 157-180 Protein denotes tumor necrosis factor α
T46 184-196 Protein denotes interferon γ
T47 294-298 Protein denotes IL-8
T48 384-388 Protein denotes IL-8
T49 414-437 Protein denotes IL-1receptor antagonist
T50 438-440 Protein denotes RA
T51 542-546 Protein denotes IL-8
T52 654-660 Protein denotes IL-1RA
T53 765-771 Protein denotes TSST-1
T54 857-863 Protein denotes TSST-1
T55 893-899 Protein denotes NFIL-6
T56 904-908 Protein denotes NFAT
T57 947-953 Protein denotes IL-1RA
T58 995-1001 Protein denotes TSST-1
T59 1049-1054 Protein denotes IL-1β
T60 1059-1063 Protein denotes IL-6
T61 1112-1118 Protein denotes TSST-1
T62 1127-1132 Protein denotes IL-1β
T63 1133-1139 Protein denotes IL-1RA
T64 1231-1237 Protein denotes TSST-1
T65 1247-1251 Protein denotes IL-1
T66 1276-1280 Protein denotes IL-2
T71 130-140 Gene_expression denotes production
T72 197-204 Positive_regulation denotes induced
T73 262-269 Positive_regulation denotes induced
T74 341-348 Binding denotes binding
T75 389-397 Entity denotes promoter
T76 402-410 Positive_regulation denotes increase
T77 427-437 Negative_regulation denotes antagonist
T78 442-452 Gene_expression denotes production
T79 572-579 Positive_regulation denotes induced
T80 592-599 Binding denotes binding
T81 611-622 Entity denotes NFIL-6 site
T82 638-642 Entity denotes site
T83 661-669 Entity denotes promoter
T84 831-839 Positive_regulation denotes elevated
T85 864-871 Positive_regulation denotes induced
T86 876-883 Binding denotes binding
T87 935-943 Positive_regulation denotes increase
T88 1036-1045 Negative_regulation denotes reduction
T89 1119-1126 Positive_regulation denotes induced
T90 1217-1226 Negative_regulation denotes decreased
T91 1238-1245 Positive_regulation denotes induced
T92 1252-1261 Positive_regulation denotes dependent
T93 1262-1272 Gene_expression denotes production
R2 T43 T71 themeOf IL-1β,production
R3 T44 T71 themeOf IL-6,production
R5 T46 T71 themeOf interferon γ,production
R6 T49 T78 themeOf IL-1receptor antagonist,production
R7 T50 T49 equivalentTo RA,IL-1receptor antagonist
R8 T51 T76 causeOf IL-8,increase
R9 T54 T85 causeOf TSST-1,induced
R10 T55 T86 themeOf NFIL-6,binding
R11 T56 T86 themeOf NFAT,binding
R12 T57 T87 themeOf IL-1RA,increase
R13 T59 T88 themeOf IL-1β,reduction
R14 T60 T88 themeOf IL-6,reduction
R15 T61 T89 causeOf TSST-1,induced
R16 T62 T89 themeOf IL-1β,induced
R17 T63 T89 themeOf IL-1RA,induced
R18 T64 T91 causeOf TSST-1,induced
R19 T65 T92 causeOf IL-1,dependent
R20 T66 T93 themeOf IL-2,production
R22 T71 T72 themeOf production,induced
R23 T75 T74 themeOf promoter,binding
R24 T75 T48 partOf promoter,IL-8
R25 T77 T76 themeOf antagonist,increase
R26 T78 T76 themeOf production,increase
R27 T80 T79 themeOf binding,induced
R28 T81 T80 themeOf NFIL-6 site,binding
R29 T81 T52 partOf NFIL-6 site,IL-1RA
R30 T83 T80 themeOf promoter,binding
R31 T83 T52 partOf promoter,IL-1RA
R32 T84 T85 themeOf elevated,induced
R33 T85 T84 themeOf induced,elevated
R34 T86 T84 themeOf binding,elevated
R35 T86 T85 themeOf binding,induced
R36 T91 T90 themeOf induced,decreased
R37 T92 T90 themeOf dependent,decreased
R38 T93 T92 themeOf production,dependent
R4 T45 T71 themeOf tumor necrosis factor α,production

test3

Id Subject Object Predicate Lexical cue
T101 48-67 Protein denotes NFinterleukin(IL)-6
T102 72-76 Protein denotes NFAT
T103 95-101 Protein denotes TSST-1
T104 144-149 Protein denotes IL-1β
T105 151-155 Protein denotes IL-6
T106 157-180 Protein denotes tumor necrosis factor α
T107 184-196 Protein denotes interferon γ
T108 294-298 Protein denotes IL-8
T109 384-388 Protein denotes IL-8
T110 414-437 Protein denotes IL-1receptor antagonist
T111 438-440 Protein denotes RA
T112 542-546 Protein denotes IL-8
T113 654-660 Protein denotes IL-1RA
T114 765-771 Protein denotes TSST-1
T115 857-863 Protein denotes TSST-1
T116 893-899 Protein denotes NFIL-6
T117 904-908 Protein denotes NFAT
T118 947-953 Protein denotes IL-1RA
T119 995-1001 Protein denotes TSST-1
T120 1049-1054 Protein denotes IL-1β
T121 1059-1063 Protein denotes IL-6
T122 1112-1118 Protein denotes TSST-1
T123 1127-1132 Protein denotes IL-1β
T124 1133-1139 Protein denotes IL-1RA
T125 1231-1237 Protein denotes TSST-1
T126 1247-1251 Protein denotes IL-1
T127 1276-1280 Protein denotes IL-2
T137 11-21 Positive_regulation denotes activation
T138 48-67 Protein denotes NFinterleukin(IL)-6
T139 72-76 Protein denotes NFAT
T140 95-101 Protein denotes TSST-1
T141 130-140 Gene_expression denotes production
T142 144-149 Protein denotes IL-1β
T143 151-155 Protein denotes IL-6
T144 157-180 Protein denotes tumor necrosis factor α
T145 184-196 Protein denotes interferon γ
T146 197-204 Positive_regulation denotes induced
T147 262-269 Positive_regulation denotes induced
T148 294-298 Protein denotes IL-8
T149 341-348 Binding denotes binding
T150 384-388 Protein denotes IL-8
T151 402-410 Positive_regulation denotes increase
T152 414-437 Protein denotes IL-1receptor antagonist
T153 438-440 Protein denotes RA
T154 442-452 Gene_expression denotes production
T155 542-546 Protein denotes IL-8
T156 572-579 Positive_regulation denotes induced
T157 592-599 Binding denotes binding
T158 654-660 Protein denotes IL-1RA
T159 765-771 Protein denotes TSST-1
T160 831-839 Positive_regulation denotes elevated
T161 857-863 Protein denotes TSST-1
T162 864-871 Positive_regulation denotes induced
T163 876-883 Binding denotes binding
T164 893-899 Protein denotes NFIL-6
T165 904-908 Protein denotes NFAT
T166 935-943 Positive_regulation denotes increase
T167 947-953 Protein denotes IL-1RA
T168 995-1001 Protein denotes TSST-1
T169 1002-1009 Positive_regulation denotes induced
T170 1036-1045 Negative_regulation denotes reduction
T171 1049-1054 Protein denotes IL-1β
T172 1059-1063 Protein denotes IL-6
T173 1112-1118 Protein denotes TSST-1
T174 1119-1126 Positive_regulation denotes induced
T175 1127-1132 Protein denotes IL-1β
T176 1133-1139 Protein denotes IL-1RA
T177 1217-1226 Negative_regulation denotes decreased
T178 1231-1237 Protein denotes TSST-1
T179 1238-1245 Positive_regulation denotes induced
T180 1247-1251 Protein denotes IL-1
T181 1252-1261 Positive_regulation denotes dependent
T182 1262-1272 Gene_expression denotes production
T183 1276-1280 Protein denotes IL-2
R66 T172 T170 themeOf IL-6,reduction
R67 T173 T174 causeOf TSST-1,induced
R68 T175 T174 themeOf IL-1β,induced
R69 T176 T174 themeOf IL-1RA,induced
R70 T178 T179 causeOf TSST-1,induced
R71 T179 T177 themeOf induced,decreased
R72 T180 T181 causeOf IL-1,dependent
R73 T182 T181 themeOf production,dependent
R74 T183 T182 themeOf IL-2,production
R42 T138 T137 themeOf NFinterleukin(IL)-6,activation
R43 T139 T137 themeOf NFAT,activation
R44 T140 T137 themeOf TSST-1,activation
R45 T141 T146 themeOf production,induced
R46 T142 T141 themeOf IL-1β,production
R47 T143 T141 themeOf IL-6,production
R48 T144 T141 themeOf tumor necrosis factor α,production
R49 T145 T141 themeOf interferon γ,production
R50 T148 T149 themeOf IL-8,binding
R51 T148 T147 themeOf IL-8,induced
R52 T152 T154 themeOf IL-1receptor antagonist,production
R53 T153 T152 equivalentTo RA,IL-1receptor antagonist
R54 T154 T151 themeOf production,increase
R56 T157 T156 themeOf binding,induced
R57 T161 T162 causeOf TSST-1,induced
R58 T162 T160 themeOf induced,elevated
R59 T163 T162 themeOf binding,induced
R60 T164 T166 causeOf NFIL-6,increase
R61 T164 T163 themeOf NFIL-6,binding
R62 T165 T163 themeOf NFAT,binding
R63 T167 T166 themeOf IL-1RA,increase
R64 T168 T169 causeOf TSST-1,induced
R65 T171 T170 themeOf IL-1β,reduction