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PMC:1472690 / 5727-5838 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1887 0-5 VB denotes Using
T1888 6-19 JJ denotes computational
T1889 20-28 NN denotes analysis
T1890 29-32 IN denotes for
T1891 33-41 NN denotes homology
T1892 42-48 NN denotes search
T1893 49-50 -LRB- denotes [
T1894 50-52 CD denotes 34
T1895 52-53 -RRB- denotes ]
T1896 53-54 -COMMA- denotes ,
T1897 55-57 PRP denotes we
T1898 58-64 VB denotes looked
T1899 65-68 IN denotes for
T1900 69-72 JJ denotes new
T1901 73-80 NN denotes binding
T1902 81-87 NN denotes motifs
T1903 88-90 IN denotes in
T1904 91-94 DT denotes the
T1905 95-101 NN denotes IL-1RA
T1906 102-110 NN denotes promoter
R1030 T1889 T1887 arg2Of analysis,Using
R1031 T1889 T1888 arg1Of analysis,computational
R1032 T1889 T1890 arg1Of analysis,for
R1033 T1892 T1890 arg2Of search,for
R1034 T1892 T1891 arg1Of search,homology
R1035 T1892 T1893 arg1Of search,[
R1036 T1894 T1893 arg2Of 34,[
R1037 T1895 T1893 arg3Of ],[
R1038 T1897 T1887 arg1Of we,Using
R1039 T1897 T1898 arg1Of we,looked
R1040 T1898 T1887 modOf looked,Using
R1041 T1898 T1896 arg1Of looked,","
R1042 T1898 T1899 arg1Of looked,for
R1043 T1902 T1899 arg2Of motifs,for
R1044 T1902 T1900 arg1Of motifs,new
R1045 T1902 T1901 arg1Of motifs,binding
R1046 T1902 T1903 arg1Of motifs,in
R1047 T1906 T1903 arg2Of promoter,in
R1048 T1906 T1904 arg1Of promoter,the
R1049 T1906 T1905 arg1Of promoter,IL-1RA

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1186 95-101 Protein denotes IL-1RA

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1920 95-101 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA

GO-MF

Id Subject Object Predicate Lexical cue
T1200 73-80 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T1091 0-111 Sentence denotes Using computational analysis for homology search [34], we looked for new binding motifs in the IL-1RA promoter.
T40 0-111 Sentence denotes Using computational analysis for homology search [34], we looked for new binding motifs in the IL-1RA promoter.

simple1

Id Subject Object Predicate Lexical cue
T1288 95-101 Protein denotes IL-1RA

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T2965 95-101 Protein denotes IL-1RA

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1963 95-101 Protein denotes IL-1RA

DLUT931

Id Subject Object Predicate Lexical cue
T2061 95-101 Protein denotes IL-1RA

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2864 91-110 Entity denotes the IL-1RA promoter
T2867 95-101 Protein denotes IL-1RA
R1811 T2864 T2867 partOf the IL-1RA promoter,IL-1RA

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2758 0-5 VBG denotes Using
T2759 6-19 JJ denotes computational
T2760 20-28 NN denotes analysis
T2761 29-32 IN denotes for
T2762 33-41 NN denotes homology
T2763 42-48 NN denotes search
T2764 49-50 NNP denotes [
T2765 50-52 CD denotes 34
T2766 52-53 NNP denotes ]
T2767 53-54 , denotes ,
T2768 55-57 PRP denotes we
T2769 58-64 VBD denotes looked
T2770 65-68 IN denotes for
T2771 69-72 JJ denotes new
T2772 73-80 JJ denotes binding
T2773 81-87 NNS denotes motifs
T2774 88-90 IN denotes in
T2775 91-94 DT denotes the
T2776 95-101 NN denotes IL-1RA
T2777 102-110 NN denotes promoter
T2778 110-111 . denotes .
R1751 T2758 T2769 advcl Using,looked
R1753 T2759 T2760 amod computational,analysis
R1755 T2760 T2758 dobj analysis,Using
R1756 T2761 T2760 prep for,analysis
R1757 T2762 T2763 compound homology,search
R1759 T2763 T2761 pobj search,for
R1760 T2764 T2766 nmod [,]
R1761 T2765 T2766 nummod 34,]
R1763 T2766 T2769 npadvmod ],looked
R1764 T2767 T2769 punct ",",looked
R1765 T2768 T2769 nsubj we,looked
R1767 T2769 T2769 ROOT looked,looked
R1768 T2770 T2769 prep for,looked
R1769 T2771 T2773 amod new,motifs
R1770 T2772 T2773 amod binding,motifs
R1771 T2773 T2770 pobj motifs,for
R1772 T2774 T2773 prep in,motifs
R1774 T2775 T2777 det the,promoter
R1775 T2776 T2777 compound IL-1RA,promoter
R1776 T2777 T2774 pobj promoter,in
R1778 T2778 T2769 punct .,looked

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T2029 95-110 Protein denotes IL-1RA promoter

testone

Id Subject Object Predicate Lexical cue
T979 95-101 Protein denotes IL-1RA

test3

Id Subject Object Predicate Lexical cue
T1024 95-101 Protein denotes IL-1RA
T1069 73-80 Binding denotes binding
T1070 95-101 Protein denotes IL-1RA
R390 T1070 T1069 themeOf IL-1RA,binding