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PMC:1472690 / 3423-3577 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1485 7-9 IN denotes of
T1486 10-26 JJ denotes pro-inflammatory
T1487 27-36 NN denotes cytokines
T1488 37-38 -LRB- denotes (
T1489 38-42 NN denotes IL-1
T1490 42-43 -COMMA- denotes ,
T1491 44-48 NN denotes IL-6
T1492 48-49 -COMMA- denotes ,
T1493 50-54 NN denotes TNFα
T1494 54-55 -RRB- denotes )
T1495 56-57 -LRB- denotes [
T1496 57-59 CD denotes 16
T1497 59-60 -RRB- denotes ]
T1498 62-65 CD denotes One
T1499 66-71 NN denotes study
T1500 72-80 VB denotes proposed
T1501 81-85 IN denotes that
T1502 86-89 DT denotes the
T1503 90-100 NN denotes production
T1504 101-103 IN denotes of
T1505 104-107 DT denotes the
T1506 108-125 JJ denotes anti-inflammatory
T1507 126-132 NN denotes IL-1RA
T1508 132-133 -COMMA- denotes ,
T1509 134-137 CC denotes but
T1510 138-141 RB denotes not
T1511 142-146 NN denotes IL-1
T1512 147-149 IN denotes by
R626 T1487 T1485 arg2Of cytokines,of
R627 T1487 T1486 arg1Of cytokines,pro-inflammatory
R628 T1487 T1488 arg1Of cytokines,(
R629 T1487 T1495 arg1Of cytokines,[
R630 T1489 T1488 arg2Of IL-1,(
R631 T1489 T1490 arg1Of IL-1,","
R632 T1489 T1492 arg1Of IL-1,","
R633 T1491 T1490 arg2Of IL-6,","
R634 T1493 T1492 arg2Of TNFα,","
R635 T1494 T1488 arg3Of ),(
R636 T1496 T1495 arg2Of 16,[
R637 T1497 T1495 arg3Of ],[
R638 T1499 T1498 arg1Of study,One
R639 T1499 T1500 arg1Of study,proposed
R640 T1503 T1504 arg1Of production,of
R641 T1503 T1509 arg1Of production,but
R642 T1507 T1504 arg2Of IL-1RA,of
R643 T1507 T1505 arg1Of IL-1RA,the
R644 T1507 T1506 arg1Of IL-1RA,anti-inflammatory
R645 T1509 T1502 arg1Of but,the
R646 T1509 T1508 arg1Of but,","
R647 T1509 T1510 arg1Of but,not
R648 T1509 T1512 arg1Of but,by
R651 T1511 T1509 arg2Of IL-1,but

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1161 38-42 Protein denotes IL-1
T1162 44-48 Protein denotes IL-6
T1163 50-54 Protein denotes TNFα
T1164 126-132 Protein denotes IL-1RA
T1165 142-146 Protein denotes IL-1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1908 50-54 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T1912 44-48 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T1915 126-132 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA

GO-MF

Id Subject Object Predicate Lexical cue
T1201 38-42 http://purl.obolibrary.org/obo/GO_0005149 denotes IL-1
T1202 142-146 http://purl.obolibrary.org/obo/GO_0005149 denotes IL-1
T1203 44-48 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

simple1

Id Subject Object Predicate Lexical cue
T1263 38-42 Protein denotes IL-1
T1264 44-48 Protein denotes IL-6
T1265 50-54 Protein denotes TNFα
T1266 126-132 Protein denotes IL-1RA
T1267 142-146 Protein denotes IL-1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T2940 38-42 Protein denotes IL-1
T2941 44-48 Protein denotes IL-6
T2942 50-54 Protein denotes TNFα
T2943 126-132 Protein denotes IL-1RA
T2944 142-146 Protein denotes IL-1
T2971 90-100 Gene_expression denotes production
R1826 T2943 T2971 themeOf IL-1RA,production
R1827 T2944 T2971 themeOf IL-1,production

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1938 38-42 Protein denotes IL-1
T1939 44-48 Protein denotes IL-6
T1940 50-54 Protein denotes TNFα
T1941 126-132 Protein denotes IL-1RA
T1942 142-146 Protein denotes IL-1
T1970 90-100 Gene_expression denotes production
R1056 T1941 T1970 themeOf IL-1RA,production
R1058 T1942 T1970 themeOf IL-1,production

DLUT931

Id Subject Object Predicate Lexical cue
T2036 38-42 Protein denotes IL-1
T2037 44-48 Protein denotes IL-6
T2038 50-54 Protein denotes TNFα
T2039 126-132 Protein denotes IL-1RA
T2040 142-146 Protein denotes IL-1
T2067 90-100 Gene_expression denotes production
R1096 T2039 T2067 themeOf IL-1RA,production
R1097 T2040 T2067 themeOf IL-1,production

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2882 101-132 Protein denotes of the anti-inflammatory IL-1RA
T2886 38-49 Protein denotes IL-1, IL-6,
T2913 7-55 Protein denotes of pro-inflammatory cytokines (IL-1, IL-6, TNFα)
T2928 86-146 Gene_expression denotes the production of the anti-inflammatory IL-1RA, but not IL-1
T2843 38-54 Protein denotes IL-1, IL-6, TNFα
T2846 44-48 Protein denotes IL-6
T2850 101-132 Entity denotes of the anti-inflammatory IL-1RA
T2856 142-146 Protein denotes IL-1
R1818 T2882 T2928 themeOf of the anti-inflammatory IL-1RA,"the production of the anti-inflammatory IL-1RA, but not IL-1"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2325 7-9 IN denotes of
T2326 10-26 JJ denotes pro-inflammatory
T2327 27-36 NNS denotes cytokines
T2328 37-38 -LRB- denotes (
T2329 38-42 NN denotes IL-1
T2330 42-43 , denotes ,
T2331 44-48 NNP denotes IL-6
T2332 48-49 , denotes ,
T2333 50-54 NNP denotes TNFα
T2334 54-55 -RRB- denotes )
T2335 56-57 NNP denotes [
T2336 57-59 CD denotes 16
T2337 59-60 NNP denotes ]
T2338 60-61 . denotes .
T2339 62-65 CD denotes One
T2340 66-71 NN denotes study
T2341 72-80 VBD denotes proposed
T2342 81-85 IN denotes that
T2343 86-89 DT denotes the
T2344 90-100 NN denotes production
T2345 101-103 IN denotes of
T2346 104-107 DT denotes the
T2347 108-125 JJ denotes anti-inflammatory
T2348 126-132 NN denotes IL-1RA
T2349 132-133 , denotes ,
T2350 134-137 CC denotes but
T2351 138-141 RB denotes not
T2352 142-146 JJ denotes IL-1
T2353 147-149 IN denotes by
R1292 T2326 T2327 amod pro-inflammatory,cytokines
R1294 T2327 T2325 pobj cytokines,of
R1295 T2328 T2337 punct (,]
R1296 T2329 T2337 amod IL-1,]
R1297 T2330 T2335 punct ",",[
R1299 T2331 T2335 nmod IL-6,[
R1300 T2332 T2331 punct ",",IL-6
R1301 T2333 T2331 conj TNFα,IL-6
R1303 T2334 T2335 punct ),[
R1304 T2335 T2337 nmod [,]
R1306 T2336 T2337 nummod 16,]
R1309 T2339 T2340 nummod One,study
R1311 T2340 T2341 nsubj study,proposed
R1312 T2341 T2341 ROOT proposed,proposed
R1315 T2343 T2344 det the,production
R1317 T2345 T2344 prep of,production
R1318 T2346 T2348 det the,IL-1RA
R1319 T2347 T2348 amod anti-inflammatory,IL-1RA
R1321 T2348 T2345 pobj IL-1RA,of
R1322 T2349 T2344 punct ",",production
R1323 T2350 T2344 cc but,production
R1324 T2351 T2352 neg not,IL-1
R1325 T2352 T2344 conj IL-1,production
R1327 T2353 T2344 prep by,production

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1989 38-42 Protein denotes IL-1
T1990 44-48 Protein denotes IL-6
T1991 50-54 Protein denotes TNFα
T1995 142-146 Protein denotes IL-1
T1996 90-100 Gene_expression denotes production
R1067 T1995 T1996 themeOf IL-1,production

testone

Id Subject Object Predicate Lexical cue
T954 38-42 Protein denotes IL-1
T955 44-48 Protein denotes IL-6
T956 50-54 Protein denotes TNFα
T957 126-132 Protein denotes IL-1RA
T958 142-146 Protein denotes IL-1
T984 90-100 Gene_expression denotes production
R360 T957 T984 themeOf IL-1RA,production
R361 T958 T984 themeOf IL-1,production

test3

Id Subject Object Predicate Lexical cue
T999 38-42 Protein denotes IL-1
T1000 44-48 Protein denotes IL-6
T1001 50-54 Protein denotes TNFα
T1002 126-132 Protein denotes IL-1RA
T1003 142-146 Protein denotes IL-1
T1036 38-42 Protein denotes IL-1
T1037 44-48 Protein denotes IL-6
T1038 50-54 Protein denotes TNFα
T1039 90-100 Gene_expression denotes production
T1040 126-132 Protein denotes IL-1RA
T1041 142-146 Protein denotes IL-1
R382 T1040 T1039 themeOf IL-1RA,production
R383 T1041 T1039 themeOf IL-1,production