> top > docs > PMC:1472690 > spans > 3239-3484 > annotations

PMC:1472690 / 3239-3484 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T1451 0-9 RB denotes Similarly
T1452 9-10 -COMMA- denotes ,
T1453 11-13 PRP denotes it
T1454 14-17 VB denotes has
T1455 18-22 VB denotes been
T1456 23-28 VB denotes shown
T1457 29-33 IN denotes that
T1458 34-49 NN denotes β-1→3-D-glucans
T1459 50-58 VB denotes activate
T1460 59-63 NN denotes NFκB
T1461 64-66 IN denotes in
T1462 67-68 DT denotes a
T1463 69-74 JJ denotes human
T1464 75-88 JJ denotes monocyte-like
T1465 89-93 NN denotes cell
T1466 94-98 NN denotes line
T1467 99-100 -LRB- denotes [
T1468 100-102 CD denotes 15
T1469 102-103 -RRB- denotes ]
T1470 104-107 CC denotes and
T1471 108-110 IN denotes in
T1472 111-116 JJ denotes human
T1473 117-134 JJ denotes polymorphonuclear
T1474 135-146 NN denotes neutrophils
T1475 147-148 -LRB- denotes (
T1476 148-151 NN denotes PMN
T1477 151-152 -RRB- denotes )
T1478 152-153 -COMMA- denotes ,
T1479 154-156 IN denotes in
T1480 157-160 DT denotes the
T1481 161-167 JJ denotes latter
T1482 168-172 NN denotes case
T1483 173-180 IN denotes without
T1484 181-190 NN denotes secretion
T1485 191-193 IN denotes of
T1486 194-210 JJ denotes pro-inflammatory
T1487 211-220 NN denotes cytokines
T1488 221-222 -LRB- denotes (
T1489 222-226 NN denotes IL-1
T1490 226-227 -COMMA- denotes ,
T1491 228-232 NN denotes IL-6
T1492 232-233 -COMMA- denotes ,
T1493 234-238 NN denotes TNFα
T1494 238-239 -RRB- denotes )
T1495 240-241 -LRB- denotes [
T1496 241-243 CD denotes 16
T1497 243-244 -RRB- denotes ]
R588 T1453 T1454 arg1Of it,has
R589 T1453 T1455 arg1Of it,been
R590 T1453 T1456 arg2Of it,shown
R591 T1456 T1451 arg1Of shown,Similarly
R592 T1456 T1452 arg1Of shown,","
R593 T1456 T1454 arg2Of shown,has
R594 T1456 T1455 arg2Of shown,been
R595 T1458 T1459 arg1Of β-1→3-D-glucans,activate
R596 T1459 T1456 arg3Of activate,shown
R597 T1459 T1457 arg1Of activate,that
R598 T1459 T1461 arg1Of activate,in
R599 T1459 T1471 arg1Of activate,in
R600 T1459 T1479 arg1Of activate,in
R601 T1459 T1483 arg1Of activate,without
R602 T1460 T1459 arg2Of NFκB,activate
R603 T1461 T1470 arg1Of in,and
R604 T1466 T1461 arg2Of line,in
R605 T1466 T1462 arg1Of line,a
R606 T1466 T1463 arg1Of line,human
R607 T1466 T1464 arg1Of line,monocyte-like
R608 T1466 T1465 arg1Of line,cell
R609 T1466 T1467 arg1Of line,[
R610 T1468 T1467 arg2Of 15,[
R611 T1469 T1467 arg3Of ],[
R612 T1470 T1478 arg1Of and,","
R613 T1471 T1470 arg2Of in,and
R614 T1474 T1471 arg2Of neutrophils,in
R615 T1474 T1472 arg1Of neutrophils,human
R616 T1474 T1473 arg1Of neutrophils,polymorphonuclear
R617 T1474 T1475 arg1Of neutrophils,(
R618 T1476 T1475 arg2Of PMN,(
R619 T1477 T1475 arg3Of ),(
R620 T1479 T1478 arg2Of in,","
R621 T1482 T1479 arg2Of case,in
R622 T1482 T1480 arg1Of case,the
R623 T1482 T1481 arg1Of case,latter
R624 T1484 T1483 arg2Of secretion,without
R625 T1484 T1485 arg1Of secretion,of
R626 T1487 T1485 arg2Of cytokines,of
R627 T1487 T1486 arg1Of cytokines,pro-inflammatory
R628 T1487 T1488 arg1Of cytokines,(
R629 T1487 T1495 arg1Of cytokines,[
R630 T1489 T1488 arg2Of IL-1,(
R631 T1489 T1490 arg1Of IL-1,","
R632 T1489 T1492 arg1Of IL-1,","
R633 T1491 T1490 arg2Of IL-6,","
R634 T1493 T1492 arg2Of TNFα,","
R635 T1494 T1488 arg3Of ),(
R636 T1496 T1495 arg2Of 16,[
R637 T1497 T1495 arg3Of ],[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T1161 222-226 Protein denotes IL-1
T1162 228-232 Protein denotes IL-6
T1163 234-238 Protein denotes TNFα

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T1908 234-238 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T1912 228-232 http://www.uniprot.org/uniprot/P05231 denotes IL-6

GO-BP

Id Subject Object Predicate Lexical cue
T1094 148-151 http://purl.obolibrary.org/obo/GO_0034727 denotes PMN
T1095 181-190 http://purl.obolibrary.org/obo/GO_0046903 denotes secretion

GO-MF

Id Subject Object Predicate Lexical cue
T1201 222-226 http://purl.obolibrary.org/obo/GO_0005149 denotes IL-1
T1203 228-232 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

GO-CC

Id Subject Object Predicate Lexical cue
T1221 89-93 http://purl.obolibrary.org/obo/GO_0005623 denotes cell

sentences

Id Subject Object Predicate Lexical cue
T1078 0-245 Sentence denotes Similarly, it has been shown that β-1→3-D-glucans activate NFκB in a human monocyte-like cell line [15] and in human polymorphonuclear neutrophils (PMN), in the latter case without secretion of pro-inflammatory cytokines (IL-1, IL-6, TNFα) [16].
T27 0-245 Sentence denotes Similarly, it has been shown that β-1→3-D-glucans activate NFκB in a human monocyte-like cell line [15] and in human polymorphonuclear neutrophils (PMN), in the latter case without secretion of pro-inflammatory cytokines (IL-1, IL-6, TNFα) [16].

simple1

Id Subject Object Predicate Lexical cue
T1263 222-226 Protein denotes IL-1
T1264 228-232 Protein denotes IL-6
T1265 234-238 Protein denotes TNFα

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T2940 222-226 Protein denotes IL-1
T2941 228-232 Protein denotes IL-6
T2942 234-238 Protein denotes TNFα
T2970 181-190 Localization denotes secretion
R1823 T2940 T2970 themeOf IL-1,secretion
R1824 T2941 T2970 themeOf IL-6,secretion
R1825 T2942 T2970 themeOf TNFα,secretion

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T1938 222-226 Protein denotes IL-1
T1939 228-232 Protein denotes IL-6
T1940 234-238 Protein denotes TNFα
T1968 181-190 Gene_expression denotes secretion
R1053 T1938 T1968 themeOf IL-1,secretion
R1054 T1939 T1968 themeOf IL-6,secretion
R1055 T1940 T1968 themeOf TNFα,secretion

DLUT931

Id Subject Object Predicate Lexical cue
T2036 222-226 Protein denotes IL-1
T2037 228-232 Protein denotes IL-6
T2038 234-238 Protein denotes TNFα
T2066 181-190 Localization denotes secretion
R1092 T2036 T2066 themeOf IL-1,secretion
R1093 T2037 T2066 themeOf IL-6,secretion
R1094 T2038 T2066 themeOf TNFα,secretion

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T2886 222-233 Protein denotes IL-1, IL-6,
T2900 111-153 Entity denotes human polymorphonuclear neutrophils (PMN),
T2902 75-153 Entity denotes monocyte-like cell line [15] and in human polymorphonuclear neutrophils (PMN),
T2908 148-151 Entity denotes PMN
T2913 191-239 Protein denotes of pro-inflammatory cytokines (IL-1, IL-6, TNFα)
T2932 181-239 Gene_expression denotes secretion of pro-inflammatory cytokines (IL-1, IL-6, TNFα)
T2843 222-238 Protein denotes IL-1, IL-6, TNFα
T2846 228-232 Protein denotes IL-6
T2851 59-63 Protein denotes NFκB
R1834 T2913 T2932 themeOf "of pro-inflammatory cytokines (IL-1, IL-6, TNFα)","secretion of pro-inflammatory cytokines (IL-1, IL-6, TNFα)"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T2289 0-9 RB denotes Similarly
T2290 9-10 , denotes ,
T2291 11-13 PRP denotes it
T2292 14-17 VBZ denotes has
T2293 18-22 VBN denotes been
T2294 23-28 VBN denotes shown
T2295 29-33 IN denotes that
T2296 34-37 JJ denotes β-1
T2297 37-38 NN denotes →
T2298 38-49 NNS denotes 3-D-glucans
T2299 50-58 VBP denotes activate
T2300 59-63 NNP denotes NFκB
T2301 64-66 IN denotes in
T2302 67-68 DT denotes a
T2303 69-74 JJ denotes human
T2304 75-88 JJ denotes monocyte-like
T2305 89-93 NN denotes cell
T2306 94-98 NN denotes line
T2307 99-100 NNP denotes [
T2308 100-102 CD denotes 15
T2309 102-103 NNP denotes ]
T2310 104-107 CC denotes and
T2311 108-110 IN denotes in
T2312 111-116 JJ denotes human
T2313 117-134 NN denotes polymorphonuclear
T2314 135-146 NNS denotes neutrophils
T2315 147-148 -LRB- denotes (
T2316 148-151 NNP denotes PMN
T2317 151-152 -RRB- denotes )
T2318 152-153 , denotes ,
T2319 154-156 IN denotes in
T2320 157-160 DT denotes the
T2321 161-167 JJ denotes latter
T2322 168-172 NN denotes case
T2323 173-180 IN denotes without
T2324 181-190 NN denotes secretion
T2325 191-193 IN denotes of
T2326 194-210 JJ denotes pro-inflammatory
T2327 211-220 NNS denotes cytokines
T2328 221-222 -LRB- denotes (
T2329 222-226 NN denotes IL-1
T2330 226-227 , denotes ,
T2331 228-232 NNP denotes IL-6
T2332 232-233 , denotes ,
T2333 234-238 NNP denotes TNFα
T2334 238-239 -RRB- denotes )
T2335 240-241 NNP denotes [
T2336 241-243 CD denotes 16
T2337 243-244 NNP denotes ]
T2338 244-245 . denotes .
R1240 T2289 T2294 advmod Similarly,shown
R1241 T2290 T2294 punct ",",shown
R1242 T2291 T2294 nsubjpass it,shown
R1244 T2292 T2294 aux has,shown
R1245 T2293 T2294 auxpass been,shown
R1246 T2294 T2294 ROOT shown,shown
R1248 T2295 T2299 mark that,activate
R1249 T2296 T2298 amod β-1,3-D-glucans
R1250 T2297 T2298 compound →,3-D-glucans
R1252 T2298 T2299 nsubj 3-D-glucans,activate
R1253 T2299 T2294 ccomp activate,shown
R1254 T2300 T2299 dobj NFκB,activate
R1256 T2301 T2299 prep in,activate
R1257 T2302 T2306 det a,line
R1261 T2303 T2305 amod human,cell
R1262 T2304 T2305 amod monocyte-like,cell
R1264 T2305 T2306 compound cell,line
R1265 T2306 T2301 pobj line,in
R1266 T2307 T2309 nmod [,]
R1267 T2308 T2309 nummod 15,]
R1268 T2309 T2306 appos ],line
R1269 T2310 T2301 cc and,in
R1271 T2311 T2301 conj in,in
R1272 T2312 T2313 amod human,polymorphonuclear
R1273 T2313 T2314 compound polymorphonuclear,neutrophils
R1275 T2314 T2311 pobj neutrophils,in
R1276 T2315 T2316 punct (,PMN
R1277 T2316 T2314 appos PMN,neutrophils
R1279 T2317 T2314 punct ),neutrophils
R1280 T2318 T2311 punct ",",in
R1282 T2319 T2311 conj in,in
R1283 T2320 T2322 det the,case
R1284 T2321 T2322 amod latter,case
R1286 T2322 T2319 pobj case,in
R1287 T2323 T2322 prep without,case
R1288 T2324 T2323 pobj secretion,without
R1290 T2325 T2324 prep of,secretion
R1292 T2326 T2327 amod pro-inflammatory,cytokines
R1294 T2327 T2325 pobj cytokines,of
R1295 T2328 T2337 punct (,]
R1296 T2329 T2337 amod IL-1,]
R1297 T2330 T2335 punct ",",[
R1299 T2331 T2335 nmod IL-6,[
R1300 T2332 T2331 punct ",",IL-6
R1301 T2333 T2331 conj TNFα,IL-6
R1303 T2334 T2335 punct ),[
R1304 T2335 T2337 nmod [,]
R1306 T2336 T2337 nummod 16,]
R1307 T2337 T2299 npadvmod ],activate
R1308 T2338 T2294 punct .,shown

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T1988 59-63 Protein denotes NFκB
T1989 222-226 Protein denotes IL-1
T1990 228-232 Protein denotes IL-6
T1991 234-238 Protein denotes TNFα
T1992 181-190 Localization denotes secretion
T1993 181-190 Localization denotes secretion
T1994 181-190 Localization denotes secretion
R1082 T1989 T1992 themeOf IL-1,secretion
R1065 T1990 T1993 themeOf IL-6,secretion
R1066 T1991 T1994 themeOf TNFα,secretion

testone

Id Subject Object Predicate Lexical cue
T954 222-226 Protein denotes IL-1
T955 228-232 Protein denotes IL-6
T956 234-238 Protein denotes TNFα

test3

Id Subject Object Predicate Lexical cue
T999 222-226 Protein denotes IL-1
T1000 228-232 Protein denotes IL-6
T1001 234-238 Protein denotes TNFα
T1035 181-190 Localization denotes secretion
T1036 222-226 Protein denotes IL-1
T1037 228-232 Protein denotes IL-6
T1038 234-238 Protein denotes TNFα
R378 T1036 T1035 themeOf IL-1,secretion
R379 T1037 T1035 themeOf IL-6,secretion
R380 T1038 T1035 themeOf TNFα,secretion