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PMC:1472690 / 32206-32967 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T17163 183-191 RB denotes moreover
T17250 759-760 -RRB- denotes ]
T17249 754-759 CD denotes 52,53
T17248 753-754 -LRB- denotes [
T17247 747-752 NN denotes ratio
T17246 734-746 NN denotes IL-1β/IL-1RA
T17245 721-733 VB denotes dysregulated
T17244 719-720 DT denotes a
T17243 714-718 IN denotes with
T17242 703-713 RB denotes especially
T17241 701-702 -COMMA- denotes ,
T17240 691-701 NN denotes conditions
T17239 674-690 JJ denotes pro-inflammatory
T17238 671-673 IN denotes in
T17237 661-670 NN denotes phosphate
T17236 654-660 NN denotes glucan
T17235 651-653 IN denotes by
T17234 642-650 VB denotes mediated
T17233 634-641 NN denotes effects
T17232 623-633 JJ denotes protective
T17231 620-622 IN denotes of
T17230 612-619 NN denotes concept
T17229 608-611 DT denotes the
T17228 600-607 VB denotes support
T17227 594-599 MD denotes might
T17226 585-593 NN denotes findings
T17225 581-584 PRP-DOLLAR- denotes our
T17224 579-580 -COMMA- denotes ,
T17223 578-579 -RRB- denotes ]
T17222 573-578 CD denotes 22,37
T17221 572-573 -LRB- denotes [
T17220 564-571 NN denotes studies
T17219 559-563 FW denotes vivo
T17218 556-558 FW denotes in
T17217 552-555 DT denotes the
T17216 547-551 IN denotes with
T17215 538-546 RB denotes Together
T17214 524-536 NN denotes carbohydrate
T17213 517-523 JJ denotes fungal
T17212 515-516 DT denotes a
T17211 512-514 IN denotes by
T17210 497-511 RB denotes differentially
T17209 487-496 VB denotes regulated
T17208 484-486 VB denotes be
T17207 480-483 MD denotes can
T17206 474-479 WDT denotes which
T17205 472-473 -COMMA- denotes ,
T17204 471-472 -RRB- denotes )
T17203 470-471 CD denotes 8
T17202 465-469 NN denotes Fig.
T17201 464-465 -LRB- denotes (
T17200 455-463 NN denotes promoter
T17199 448-454 NN denotes IL-1RA
T17198 444-447 DT denotes the
T17197 441-443 IN denotes in
T17196 435-440 NN denotes sites
T17195 424-434 VB denotes identified
T17194 418-423 RB denotes newly
T17193 414-417 CC denotes and
T17192 408-413 VB denotes known
T17191 400-407 JJ denotes various
T17190 397-399 TO denotes to
T17189 389-396 VB denotes binding
T17188 382-388 NN denotes factor
T17187 368-381 NN denotes transcription
T17186 365-367 IN denotes of
T17185 355-364 NN denotes interplay
T17184 347-354 JJ denotes complex
T17183 342-346 RB denotes very
T17182 340-341 DT denotes a
T17181 335-339 IN denotes into
T17180 326-334 NN denotes insights
T17179 322-325 JJ denotes new
T17178 312-321 VB denotes generated
T17177 307-311 RB denotes also
T17176 299-306 NN denotes results
T17175 295-298 PRP-DOLLAR- denotes Our
T17174 285-293 NN denotes reaction
T17173 267-284 JJ denotes anti-inflammatory
T17172 251-266 JJ denotes IL-1RA-mediated
T17171 248-250 DT denotes an
T17170 245-247 TO denotes to
T17169 236-244 NN denotes response
T17168 221-235 JJ denotes TSST-1-induced
T17167 204-220 JJ denotes pro-inflammatory
T17166 202-203 DT denotes a
T17165 193-201 VB denotes switched
T17164 191-192 -COMMA- denotes ,
T17162 181-182 -COMMA- denotes ,
T17161 178-181 CC denotes and
T17160 171-177 NN denotes TSST-1
T17159 166-170 IN denotes from
T17158 161-165 RB denotes also
T17157 157-160 CC denotes and
T17156 153-156 NN denotes LPS
T17155 148-152 IN denotes from
T17154 138-147 JJ denotes different
T17153 130-137 NN denotes profile
T17152 121-129 NN denotes cytokine
T17151 110-120 JJ denotes subsequent
T17150 108-109 DT denotes a
T17149 104-107 CC denotes and
T17148 96-103 NN denotes binding
T17147 89-95 NN denotes factor
T17146 75-88 NN denotes transcription
T17145 73-74 DT denotes a
T17144 65-72 VB denotes induced
T17143 55-64 NN denotes phosphate
T17142 48-54 NN denotes glucan
T17141 42-47 FW denotes vitro
T17140 39-41 FW denotes in
T17139 34-38 IN denotes that
T17138 21-33 VB denotes demonstrated
T17137 16-20 NN denotes data
T17136 12-15 PRP-DOLLAR- denotes our
T17135 10-11 -COMMA- denotes ,
T17134 3-10 NN denotes summary
T17133 0-2 IN denotes In
R11503 T17134 T17133 arg2Of summary,In
R11504 T17137 T17136 arg1Of data,our
R11505 T17137 T17138 arg1Of data,demonstrated
R11506 T17138 T17133 arg1Of demonstrated,In
R11507 T17138 T17135 arg1Of demonstrated,","
R11508 T17141 T17140 arg1Of vitro,in
R11509 T17143 T17141 arg1Of phosphate,vitro
R11510 T17143 T17142 arg1Of phosphate,glucan
R11511 T17143 T17144 arg1Of phosphate,induced
R11512 T17143 T17165 arg1Of phosphate,switched
R11513 T17144 T17162 arg1Of induced,","
R11514 T17148 T17145 arg1Of binding,a
R11515 T17148 T17146 arg1Of binding,transcription
R11516 T17148 T17147 arg1Of binding,factor
R11517 T17148 T17149 arg1Of binding,and
R11518 T17149 T17144 arg2Of and,induced
R11519 T17153 T17149 arg2Of profile,and
R11520 T17153 T17150 arg1Of profile,a
R11521 T17153 T17151 arg1Of profile,subsequent
R11522 T17153 T17152 arg1Of profile,cytokine
R11523 T17153 T17154 arg1Of profile,different
R11524 T17153 T17161 arg1Of profile,and
R11525 T17154 T17155 arg1Of different,from
R11526 T17154 T17159 arg1Of different,from
R11527 T17155 T17157 arg1Of from,and
R11528 T17156 T17155 arg2Of LPS,from
R11529 T17159 T17157 arg2Of from,and
R11530 T17159 T17158 arg1Of from,also
R11531 T17160 T17159 arg2Of TSST-1,from
R11532 T17162 T17138 arg2Of ",",demonstrated
R11533 T17162 T17139 arg1Of ",",that
R11534 T17165 T17162 arg2Of switched,","
R11535 T17165 T17163 arg1Of switched,moreover
R11536 T17165 T17164 arg1Of switched,","
R11537 T17169 T17165 arg2Of response,switched
R11538 T17169 T17166 arg1Of response,a
R11539 T17169 T17167 arg1Of response,pro-inflammatory
R11540 T17169 T17168 arg1Of response,TSST-1-induced
R11541 T17169 T17170 arg1Of response,to
R11542 T17174 T17170 arg2Of reaction,to
R11543 T17174 T17171 arg1Of reaction,an
R11544 T17174 T17172 arg1Of reaction,IL-1RA-mediated
R11545 T17174 T17173 arg1Of reaction,anti-inflammatory
R11546 T17176 T17175 arg1Of results,Our
R11547 T17176 T17178 arg1Of results,generated
R11548 T17178 T17177 arg1Of generated,also
R11549 T17178 T17181 arg1Of generated,into
R11550 T17180 T17178 arg2Of insights,generated
R11551 T17180 T17179 arg1Of insights,new
R11552 T17184 T17183 arg1Of complex,very
R11553 T17185 T17181 arg2Of interplay,into
R11554 T17185 T17182 arg1Of interplay,a
R11555 T17185 T17184 arg1Of interplay,complex
R11556 T17185 T17186 arg1Of interplay,of
R11557 T17188 T17186 arg2Of factor,of
R11558 T17188 T17187 arg1Of factor,transcription
R11559 T17188 T17189 arg1Of factor,binding
R11560 T17188 T17197 arg1Of factor,in
R11561 T17188 T17205 arg1Of factor,","
R11562 T17188 T17206 arg1Of factor,which
R11563 T17188 T17207 arg1Of factor,can
R11564 T17188 T17208 arg1Of factor,be
R11565 T17188 T17209 arg2Of factor,regulated
R11566 T17189 T17190 arg1Of binding,to
R11567 T17192 T17193 arg1Of known,and
R11568 T17195 T17193 arg2Of identified,and
R11569 T17195 T17194 arg1Of identified,newly
R11570 T17196 T17190 arg2Of sites,to
R11571 T17196 T17191 arg1Of sites,various
R11572 T17196 T17192 arg1Of sites,known
R11573 T17196 T17195 arg1Of sites,identified
R11574 T17200 T17197 arg2Of promoter,in
R11575 T17200 T17198 arg1Of promoter,the
R11576 T17200 T17199 arg1Of promoter,IL-1RA
R11577 T17200 T17201 arg1Of promoter,(
R11578 T17202 T17201 arg2Of Fig.,(
R11579 T17202 T17203 arg1Of Fig.,8
R11580 T17204 T17201 arg3Of ),(
R11581 T17209 T17207 arg2Of regulated,can
R11582 T17209 T17208 arg2Of regulated,be
R11583 T17209 T17210 arg1Of regulated,differentially
R11584 T17214 T17209 arg1Of carbohydrate,regulated
R11585 T17214 T17211 arg2Of carbohydrate,by
R11586 T17214 T17212 arg1Of carbohydrate,a
R11587 T17214 T17213 arg1Of carbohydrate,fungal
R11588 T17215 T17216 arg1Of Together,with
R11589 T17219 T17218 arg1Of vivo,in
R11590 T17220 T17216 arg2Of studies,with
R11591 T17220 T17217 arg1Of studies,the
R11592 T17220 T17219 arg1Of studies,vivo
R11593 T17220 T17221 arg1Of studies,[
R11594 T17222 T17221 arg2Of "22,37",[
R11595 T17223 T17221 arg3Of ],[
R11596 T17226 T17225 arg1Of findings,our
R11597 T17226 T17227 arg1Of findings,might
R11598 T17226 T17228 arg1Of findings,support
R11599 T17228 T17215 arg1Of support,Together
R11600 T17228 T17224 arg1Of support,","
R11601 T17228 T17227 arg2Of support,might
R11602 T17230 T17228 arg2Of concept,support
R11603 T17230 T17229 arg1Of concept,the
R11604 T17230 T17231 arg1Of concept,of
R11605 T17233 T17231 arg2Of effects,of
R11606 T17233 T17232 arg1Of effects,protective
R11607 T17233 T17234 arg2Of effects,mediated
R11608 T17237 T17234 arg1Of phosphate,mediated
R11609 T17237 T17235 arg2Of phosphate,by
R11610 T17237 T17236 arg1Of phosphate,glucan
R11611 T17237 T17238 arg1Of phosphate,in
R11612 T17240 T17238 arg2Of conditions,in
R11613 T17240 T17239 arg1Of conditions,pro-inflammatory
R11614 T17240 T17241 arg1Of conditions,","
R11615 T17240 T17243 arg1Of conditions,with
R11616 T17243 T17242 arg1Of with,especially
R11617 T17247 T17243 arg2Of ratio,with
R11618 T17247 T17244 arg1Of ratio,a
R11619 T17247 T17245 arg2Of ratio,dysregulated
R11620 T17247 T17246 arg1Of ratio,IL-1β/IL-1RA
R11621 T17247 T17248 arg1Of ratio,[
R11622 T17249 T17248 arg2Of "52,53",[
R11623 T17250 T17248 arg3Of ],[

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T17124 740-746 Protein denotes IL-1RA
T17123 734-739 Protein denotes IL-1β
T17122 448-454 Protein denotes IL-1RA
T17121 251-257 Protein denotes IL-1RA
T17120 221-227 Protein denotes TSST-1
T17119 171-177 Protein denotes TSST-1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T17256 734-739 http://www.uniprot.org/uniprot/P01584 denotes IL-1β
T17255 740-746 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T17254 448-454 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T17253 251-257 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T17252 221-227 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T17251 171-177 http://www.uniprot.org/uniprot/P06886 denotes TSST-1

GO-BP

Id Subject Object Predicate Lexical cue
T17109 368-381 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T17108 75-88 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

GO-MF

Id Subject Object Predicate Lexical cue
T17126 389-396 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T17125 96-103 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T17107 538-761 Sentence denotes Together with the in vivo studies [22,37], our findings might support the concept of protective effects mediated by glucan phosphate in pro-inflammatory conditions, especially with a dysregulated IL-1β/IL-1RA ratio [52,53].
T17106 295-537 Sentence denotes Our results also generated new insights into a very complex interplay of transcription factor binding to various known and newly identified sites in the IL-1RA promoter (Fig. 8), which can be regulated differentially by a fungal carbohydrate.
T17105 0-294 Sentence denotes In summary, our data demonstrated that in vitro glucan phosphate induced a transcription factor binding and a subsequent cytokine profile different from LPS and also from TSST-1 and, moreover, switched a pro-inflammatory TSST-1-induced response to an IL-1RA-mediated anti-inflammatory reaction.
T223 0-294 Sentence denotes In summary, our data demonstrated that in vitro glucan phosphate induced a transcription factor binding and a subsequent cytokine profile different from LPS and also from TSST-1 and, moreover, switched a pro-inflammatory TSST-1-induced response to an IL-1RA-mediated anti-inflammatory reaction.
T224 295-537 Sentence denotes Our results also generated new insights into a very complex interplay of transcription factor binding to various known and newly identified sites in the IL-1RA promoter (Fig. 8), which can be regulated differentially by a fungal carbohydrate.
T225 538-761 Sentence denotes Together with the in vivo studies [22,37], our findings might support the concept of protective effects mediated by glucan phosphate in pro-inflammatory conditions, especially with a dysregulated IL-1β/IL-1RA ratio [52,53].

simple1

Id Subject Object Predicate Lexical cue
T17132 740-746 Protein denotes IL-1RA
T17131 734-739 Protein denotes IL-1β
T17130 448-454 Protein denotes IL-1RA
T17129 251-257 Protein denotes IL-1RA
T17128 221-227 Protein denotes TSST-1
T17127 171-177 Protein denotes TSST-1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T17434 389-396 Binding denotes binding
T17433 487-496 Regulation denotes regulated
T17432 740-746 Protein denotes IL-1RA
T17431 734-739 Protein denotes IL-1β
T17430 448-454 Protein denotes IL-1RA
T17429 251-257 Protein denotes IL-1RA
T17428 221-227 Protein denotes TSST-1
T17427 171-177 Protein denotes TSST-1
R11762 T17430 T17434 themeOf IL-1RA,binding
R11763 T17430 T17433 themeOf IL-1RA,regulated

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T17266 487-496 Regulation denotes regulated
T17265 389-396 Binding denotes binding
T17264 228-235 Positive_regulation denotes induced
T17263 65-72 Positive_regulation denotes induced
T17262 740-746 Protein denotes IL-1RA
T17261 734-739 Protein denotes IL-1β
T17260 448-454 Protein denotes IL-1RA
T17259 251-257 Protein denotes IL-1RA
T17258 221-227 Protein denotes TSST-1
T17257 171-177 Protein denotes TSST-1
R11624 T17257 T17263 themeOf TSST-1,induced
R11625 T17258 T17264 themeOf TSST-1,induced
R11626 T17260 T17265 themeOf IL-1RA,binding
R11627 T17260 T17266 themeOf IL-1RA,regulated

DLUT931

Id Subject Object Predicate Lexical cue
T17286 740-746 Protein denotes IL-1RA
T17285 734-739 Protein denotes IL-1β
T17284 448-454 Protein denotes IL-1RA
T17283 251-257 Protein denotes IL-1RA
T17282 221-227 Protein denotes TSST-1
T17281 171-177 Protein denotes TSST-1
T17289 721-733 Positive_regulation denotes dysregulated
T17288 487-496 Regulation denotes regulated
T17287 389-396 Binding denotes binding
R11632 T17284 T17287 themeOf IL-1RA,binding
R11633 T17284 T17288 themeOf IL-1RA,regulated
R11634 T17285 T17289 themeOf IL-1β,dysregulated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T17452 73-103 Binding denotes a transcription factor binding
T17451 740-744 Protein denotes IL-1
T17450 448-454 Protein denotes IL-1RA
T17449 171-177 Protein denotes TSST-1
T17448 248-293 Entity denotes an IL-1RA-mediated anti-inflammatory reaction
T17447 515-536 Entity denotes a fungal carbohydrate
T17446 48-54 Entity denotes glucan
T17445 734-744 Protein denotes IL-1β/IL-1
T17444 651-670 Entity denotes by glucan phosphate
T17443 734-744 Protein denotes IL-1β/IL-1
T17442 48-64 Entity denotes glucan phosphate
T17441 744-746 Protein denotes RA
T17440 221-235 Protein denotes TSST-1-induced
T17439 251-266 Protein denotes IL-1RA-mediated
T17438 444-472 Entity denotes the IL-1RA promoter (Fig. 8)
T17437 108-129 Protein denotes a subsequent cytokine
T17436 654-660 Entity denotes glucan
T17435 153-156 Entity denotes LPS
R11764 T17438 T17450 partOf the IL-1RA promoter (Fig. 8),IL-1RA

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T17418 760-761 . denotes .
T17417 759-760 NNP denotes ]
T17416 754-759 CD denotes 52,53
T17415 753-754 NNP denotes [
T17414 747-752 NN denotes ratio
T17413 740-746 NN denotes IL-1RA
T17412 739-740 NN denotes /
T17411 734-739 NN denotes IL-1β
T17410 721-733 VBN denotes dysregulated
T17409 719-720 DT denotes a
T17408 714-718 IN denotes with
T17407 703-713 RB denotes especially
T17406 701-702 , denotes ,
T17405 691-701 NNS denotes conditions
T17404 674-690 JJ denotes pro-inflammatory
T17403 671-673 IN denotes in
T17402 661-670 NN denotes phosphate
T17401 654-660 JJ denotes glucan
T17400 651-653 IN denotes by
T17399 642-650 VBN denotes mediated
T17398 634-641 NNS denotes effects
T17397 623-633 JJ denotes protective
T17359 424-434 VBN denotes identified
T17358 418-423 RB denotes newly
T17357 414-417 CC denotes and
T17356 408-413 VBN denotes known
T17355 400-407 JJ denotes various
T17354 397-399 TO denotes to
T17353 389-396 JJ denotes binding
T17352 382-388 NN denotes factor
T17351 368-381 NN denotes transcription
T17350 365-367 IN denotes of
T17349 355-364 NN denotes interplay
T17348 347-354 JJ denotes complex
T17347 342-346 RB denotes very
T17346 340-341 DT denotes a
T17345 335-339 IN denotes into
T17344 326-334 NNS denotes insights
T17343 322-325 JJ denotes new
T17342 312-321 VBD denotes generated
T17341 307-311 RB denotes also
T17340 299-306 NNS denotes results
T17339 295-298 PRP$ denotes Our
T17338 293-294 . denotes .
T17337 285-293 NN denotes reaction
T17336 267-284 JJ denotes anti-inflammatory
T17297 3-10 NN denotes summary
T17296 0-2 IN denotes In
T17328 193-201 VBD denotes switched
T17327 191-192 , denotes ,
T17326 183-191 RB denotes moreover
T17325 181-182 , denotes ,
T17335 251-266 JJ denotes IL-1RA-mediated
T17334 248-250 DT denotes an
T17333 245-247 TO denotes to
T17332 236-244 NN denotes response
T17331 221-235 JJ denotes TSST-1-induced
T17330 204-220 JJ denotes pro-inflammatory
T17329 202-203 DT denotes a
T17324 178-181 CC denotes and
T17323 171-177 CD denotes TSST-1
T17322 166-170 IN denotes from
T17321 161-165 RB denotes also
T17320 157-160 CC denotes and
T17319 153-156 NNP denotes LPS
T17318 148-152 IN denotes from
T17317 138-147 JJ denotes different
T17316 130-137 NN denotes profile
T17315 121-129 NN denotes cytokine
T17314 110-120 JJ denotes subsequent
T17313 108-109 DT denotes a
T17312 104-107 CC denotes and
T17311 96-103 JJ denotes binding
T17310 89-95 NN denotes factor
T17309 75-88 NN denotes transcription
T17308 73-74 DT denotes a
T17307 65-72 VBD denotes induced
T17306 55-64 NN denotes phosphate
T17305 48-54 NN denotes glucan
T17304 42-47 NN denotes vitro
T17303 39-41 IN denotes in
T17302 34-38 IN denotes that
T17301 21-33 VBD denotes demonstrated
T17300 16-20 NNS denotes data
T17299 12-15 PRP$ denotes our
T17298 10-11 , denotes ,
T17396 620-622 IN denotes of
T17395 612-619 NN denotes concept
T17394 608-611 DT denotes the
T17393 600-607 VB denotes support
T17392 594-599 MD denotes might
T17391 585-593 NNS denotes findings
T17390 581-584 PRP$ denotes our
T17389 579-580 , denotes ,
T17388 578-579 NNP denotes ]
T17387 573-578 CD denotes 22,37
T17386 572-573 NNP denotes [
T17385 564-571 NNS denotes studies
T17384 559-563 NN denotes vivo
T17383 556-558 IN denotes in
T17382 552-555 DT denotes the
T17381 547-551 IN denotes with
T17380 538-546 RB denotes Together
T17379 536-537 . denotes .
T17378 524-536 NN denotes carbohydrate
T17377 517-523 JJ denotes fungal
T17376 515-516 DT denotes a
T17375 512-514 IN denotes by
T17374 497-511 RB denotes differentially
T17373 487-496 VBN denotes regulated
T17372 484-486 VB denotes be
T17371 480-483 MD denotes can
T17370 474-479 WDT denotes which
T17369 472-473 , denotes ,
T17368 471-472 -RRB- denotes )
T17367 470-471 CD denotes 8
T17366 465-469 FW denotes Fig.
T17365 464-465 -LRB- denotes (
T17364 455-463 NN denotes promoter
T17363 448-454 NN denotes IL-1RA
T17362 444-447 DT denotes the
T17361 441-443 IN denotes in
T17360 435-440 NNS denotes sites
R11635 T17296 T17301 prep In,demonstrated
R11636 T17297 T17296 pobj summary,In
R11637 T17298 T17301 punct ",",demonstrated
R11638 T17299 T17300 poss our,data
R11639 T17300 T17301 nsubj data,demonstrated
R11640 T17301 T17301 ROOT demonstrated,demonstrated
R11641 T17302 T17307 mark that,induced
R11642 T17303 T17307 prep in,induced
R11643 T17304 T17306 amod vitro,phosphate
R11644 T17305 T17306 compound glucan,phosphate
R11645 T17306 T17303 pobj phosphate,in
R11646 T17307 T17301 ccomp induced,demonstrated
R11647 T17308 T17310 det a,factor
R11648 T17309 T17310 compound transcription,factor
R11649 T17310 T17307 dobj factor,induced
R11650 T17311 T17307 advmod binding,induced
R11651 T17312 T17307 cc and,induced
R11652 T17313 T17316 det a,profile
R11653 T17314 T17316 amod subsequent,profile
R11654 T17315 T17316 compound cytokine,profile
R11655 T17316 T17307 conj profile,induced
R11656 T17317 T17316 amod different,profile
R11657 T17318 T17317 prep from,different
R11658 T17319 T17318 pobj LPS,from
R11659 T17320 T17307 cc and,induced
R11660 T17321 T17322 advmod also,from
R11661 T17322 T17307 conj from,induced
R11662 T17323 T17322 pobj TSST-1,from
R11663 T17324 T17323 cc and,TSST-1
R11664 T17325 T17307 punct ",",induced
R11665 T17326 T17328 advmod moreover,switched
R11666 T17327 T17328 punct ",",switched
R11667 T17328 T17301 conj switched,demonstrated
R11668 T17329 T17332 det a,response
R11669 T17330 T17332 amod pro-inflammatory,response
R11670 T17331 T17332 amod TSST-1-induced,response
R11671 T17332 T17328 dobj response,switched
R11672 T17333 T17332 prep to,response
R11673 T17334 T17337 det an,reaction
R11674 T17335 T17337 amod IL-1RA-mediated,reaction
R11675 T17336 T17337 amod anti-inflammatory,reaction
R11676 T17337 T17333 pobj reaction,to
R11677 T17338 T17328 punct .,switched
R11678 T17339 T17340 poss Our,results
R11679 T17340 T17342 nsubj results,generated
R11680 T17341 T17342 advmod also,generated
R11681 T17342 T17342 ROOT generated,generated
R11682 T17343 T17344 amod new,insights
R11683 T17344 T17342 dobj insights,generated
R11684 T17345 T17344 prep into,insights
R11685 T17346 T17349 det a,interplay
R11686 T17347 T17348 advmod very,complex
R11687 T17348 T17349 amod complex,interplay
R11688 T17349 T17345 pobj interplay,into
R11689 T17350 T17349 prep of,interplay
R11690 T17351 T17352 compound transcription,factor
R11691 T17352 T17350 pobj factor,of
R11692 T17353 T17349 amod binding,interplay
R11693 T17354 T17353 prep to,binding
R11694 T17355 T17360 amod various,sites
R11695 T17356 T17360 amod known,sites
R11696 T17357 T17356 cc and,known
R11697 T17358 T17359 advmod newly,identified
R11698 T17359 T17356 conj identified,known
R11699 T17360 T17354 pobj sites,to
R11700 T17361 T17360 prep in,sites
R11701 T17362 T17364 det the,promoter
R11702 T17363 T17364 compound IL-1RA,promoter
R11703 T17364 T17361 pobj promoter,in
R11704 T17365 T17364 punct (,promoter
R11705 T17366 T17367 nmod Fig.,8
R11706 T17367 T17364 appos 8,promoter
R11707 T17368 T17364 punct ),promoter
R11708 T17369 T17360 punct ",",sites
R11709 T17370 T17373 nsubjpass which,regulated
R11710 T17371 T17373 aux can,regulated
R11711 T17372 T17373 auxpass be,regulated
R11712 T17373 T17360 relcl regulated,sites
R11713 T17374 T17373 advmod differentially,regulated
R11714 T17375 T17373 agent by,regulated
R11715 T17376 T17378 det a,carbohydrate
R11716 T17377 T17378 amod fungal,carbohydrate
R11717 T17378 T17375 pobj carbohydrate,by
R11718 T17379 T17342 punct .,generated
R11719 T17380 T17381 advmod Together,with
R11720 T17381 T17393 prep with,support
R11721 T17382 T17383 det the,in
R11722 T17383 T17381 pobj in,with
R11723 T17384 T17385 compound vivo,studies
R11724 T17385 T17383 pobj studies,in
R11725 T17386 T17388 compound [,]
R11726 T17387 T17388 compound "22,37",]
R11727 T17388 T17385 appos ],studies
R11728 T17389 T17393 punct ",",support
R11729 T17390 T17391 poss our,findings
R11730 T17391 T17393 nsubj findings,support
R11731 T17392 T17393 aux might,support
R11732 T17393 T17393 ROOT support,support
R11733 T17394 T17395 det the,concept
R11734 T17395 T17393 dobj concept,support
R11735 T17396 T17395 prep of,concept
R11736 T17397 T17398 amod protective,effects
R11737 T17398 T17396 pobj effects,of
R11738 T17399 T17395 acl mediated,concept
R11739 T17400 T17399 agent by,mediated
R11740 T17401 T17402 amod glucan,phosphate
R11741 T17402 T17400 pobj phosphate,by
R11742 T17403 T17402 prep in,phosphate
R11743 T17404 T17405 amod pro-inflammatory,conditions
R11744 T17405 T17403 pobj conditions,in
R11745 T17406 T17395 punct ",",concept
R11746 T17407 T17408 advmod especially,with
R11747 T17408 T17393 prep with,support
R11748 T17409 T17414 det a,ratio
R11749 T17410 T17414 amod dysregulated,ratio
R11750 T17411 T17414 nmod IL-1β,ratio
R11751 T17412 T17414 nmod /,ratio
R11752 T17413 T17414 compound IL-1RA,ratio
R11753 T17414 T17408 pobj ratio,with
R11754 T17415 T17417 nmod [,]
R11755 T17416 T17417 nummod "52,53",]
R11756 T17417 T17414 appos ],ratio
R11757 T17418 T17393 punct .,support

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T17280 654-660 Protein denotes glucan
T17279 487-496 Regulation denotes regulated
T17278 487-496 Regulation denotes regulated
T17277 389-396 Binding denotes binding
T17276 389-396 Binding denotes binding
T17275 465-468 Protein denotes Fig
T17274 448-463 Protein denotes IL-1RA promoter
T17273 171-177 Protein denotes TSST-1
R11628 T17274 T17276 themeOf IL-1RA promoter,binding
R11629 T17274 T17278 themeOf IL-1RA promoter,regulated
R11630 T17275 T17277 themeOf Fig,binding
R11631 T17275 T17279 themeOf Fig,regulated

testone

Id Subject Object Predicate Lexical cue
T17091 389-396 Binding denotes binding
T17090 65-72 Positive_regulation denotes induced
T17089 740-746 Protein denotes IL-1RA
T17088 734-739 Protein denotes IL-1β
T17087 448-454 Protein denotes IL-1RA
T17086 251-257 Protein denotes IL-1RA
T17085 221-227 Protein denotes TSST-1
T17084 171-177 Protein denotes TSST-1

test3

Id Subject Object Predicate Lexical cue
T17104 740-746 Protein denotes IL-1RA
T17103 734-739 Protein denotes IL-1β
T17102 448-454 Protein denotes IL-1RA
T17101 389-396 Binding denotes binding
T17100 251-257 Protein denotes IL-1RA
T17099 221-227 Protein denotes TSST-1
T17098 171-177 Protein denotes TSST-1
T17097 740-746 Protein denotes IL-1RA
T17096 734-739 Protein denotes IL-1β
T17095 448-454 Protein denotes IL-1RA
T17094 251-257 Protein denotes IL-1RA
T17093 221-227 Protein denotes TSST-1
T17092 171-177 Protein denotes TSST-1