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PMC:1472690 / 28789-28882 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T13643 85-93 NN denotes promoter
T13642 80-84 NN denotes TNFα
T13641 76-79 DT denotes the
T13640 71-75 IN denotes from
T13639 65-70 NN denotes sites
T13638 62-64 TO denotes to
T13637 57-61 NN denotes NFκB
T13636 54-56 IN denotes of
T13635 46-53 NN denotes binding
T13634 31-45 JJ denotes TSST-1-induced
T13633 27-30 DT denotes the
T13632 22-26 IN denotes that
T13631 16-21 VB denotes found
T13630 13-15 PRP denotes we
T13629 11-12 -COMMA- denotes ,
T13628 0-11 RB denotes Accordingly
R8803 T13630 T13631 arg1Of we,found
R8804 T13631 T13628 arg1Of found,Accordingly
R8805 T13631 T13629 arg1Of found,","
R8806 T13635 T13633 arg1Of binding,the
R8807 T13635 T13634 arg1Of binding,TSST-1-induced
R8808 T13635 T13636 arg1Of binding,of
R8809 T13635 T13638 arg1Of binding,to
R8811 T13637 T13636 arg2Of NFκB,of
R8812 T13639 T13638 arg2Of sites,to
R8813 T13639 T13640 arg1Of sites,from
R8814 T13643 T13640 arg2Of promoter,from
R8815 T13643 T13641 arg1Of promoter,the
R8816 T13643 T13642 arg1Of promoter,TNFα

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T12377 80-84 Protein denotes TNFα
T12376 31-37 Protein denotes TSST-1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T14313 31-37 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T14292 80-84 http://www.uniprot.org/uniprot/P01375 denotes TNFα

GO-MF

Id Subject Object Predicate Lexical cue
T12540 46-53 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

simple1

Id Subject Object Predicate Lexical cue
T12756 80-84 Protein denotes TNFα
T12755 31-37 Protein denotes TSST-1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T16594 80-84 Protein denotes TNFα
T16593 31-37 Protein denotes TSST-1

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T14402 80-84 Protein denotes TNFα
T14401 31-37 Protein denotes TSST-1
T14483 46-53 Binding denotes binding
T14482 38-45 Positive_regulation denotes induced
R9527 T14483 T14482 themeOf binding,induced
R9599 T14401 T14482 causeOf TSST-1,induced
R9602 T14402 T14483 themeOf TNFα,binding

DLUT931

Id Subject Object Predicate Lexical cue
T14662 38-45 Positive_regulation denotes induced
T14660 46-53 Binding denotes binding
T14577 80-84 Protein denotes TNFα
T14576 31-37 Protein denotes TSST-1
R9629 T14576 T14662 causeOf TSST-1,induced
R9630 T14577 T14660 themeOf TNFα,binding
R9702 T14660 T14662 themeOf binding,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T16939 0-93 Binding denotes Accordingly, we found that the TSST-1-induced binding of NFκB to sites from the TNFα promoter
T16903 54-61 Protein denotes of NFκB
T16851 80-84 Protein denotes TNFα
T16803 27-37 Protein denotes the TSST-1
T16770 76-93 Entity denotes the TNFα promoter
T16767 62-93 Entity denotes to sites from the TNFα promoter
R11454 T16767 T16903 partOf to sites from the TNFα promoter,of NFκB
R11458 T16770 T16851 partOf the TNFα promoter,TNFα
R11474 T16803 T16939 themeOf the TSST-1,"Accordingly, we found that the TSST-1-induced binding of NFκB to sites from the TNFα promoter"
R11493 T16903 T16939 themeOf of NFκB,"Accordingly, we found that the TSST-1-induced binding of NFκB to sites from the TNFα promoter"
R11455 T16767 T16939 siteOf to sites from the TNFα promoter,"Accordingly, we found that the TSST-1-induced binding of NFκB to sites from the TNFα promoter"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15703 85-93 NN denotes promoter
T15702 80-84 NNP denotes TNFα
T15701 76-79 DT denotes the
T15700 71-75 IN denotes from
T15699 65-70 NNS denotes sites
T15698 62-64 TO denotes to
T15697 57-61 NNP denotes NFκB
T15696 54-56 IN denotes of
T15695 46-53 JJ denotes binding
T15694 31-45 JJ denotes TSST-1-induced
T15693 27-30 DT denotes the
T15692 22-26 IN denotes that
T15691 16-21 VBD denotes found
T15690 13-15 PRP denotes we
T15689 11-12 , denotes ,
T15688 0-11 RB denotes Accordingly
R10708 T15688 T15691 advmod Accordingly,found
R10711 T15689 T15691 punct ",",found
R10715 T15690 T15691 nsubj we,found
R10724 T15693 T15695 det the,binding
R10727 T15694 T15695 advmod TSST-1-induced,binding
R10734 T15696 T15695 prep of,binding
R10738 T15697 T15696 pobj NFκB,of
R10742 T15698 T15695 prep to,binding
R10745 T15699 T15698 pobj sites,to
R10748 T15700 T15699 prep from,sites
R10751 T15701 T15703 det the,promoter
R10755 T15702 T15703 compound TNFα,promoter
R10759 T15703 T15700 pobj promoter,from

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T12450 46-53 Binding denotes binding
T12449 46-53 Binding denotes binding
T12448 80-93 Protein denotes TNFα promoter
T12447 57-61 Protein denotes NFκB
R7916 T12447 T12449 themeOf NFκB,binding
R7917 T12447 T12450 themeOf NFκB,binding
R7918 T12448 T12450 themeOf TNFα promoter,binding

testone

Id Subject Object Predicate Lexical cue
T11426 80-84 Protein denotes TNFα
T11425 31-37 Protein denotes TSST-1
T11516 46-53 Binding denotes binding
T11515 38-45 Positive_regulation denotes induced
R7464 T11425 T11515 causeOf TSST-1,induced
R7512 T11516 T11515 themeOf binding,induced

test3

Id Subject Object Predicate Lexical cue
T11629 80-84 Protein denotes TNFα
T11628 31-37 Protein denotes TSST-1
T11783 80-84 Protein denotes TNFα
T11782 46-53 Binding denotes binding
T11781 38-45 Positive_regulation denotes induced
T11780 31-37 Protein denotes TSST-1
R7592 T11780 T11781 causeOf TSST-1,induced
R7593 T11782 T11781 themeOf binding,induced
R7594 T11783 T11782 themeOf TNFα,binding